mRNA_E-siliculosus-1a_M_contig9.17081.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.17081.1 vs. uniprot
Match: D7G4K3_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K3_ECTSI) HSP 1 Score: 410 bits (1055), Expect = 7.860e-145 Identity = 196/203 (96.55%), Postives = 201/203 (99.01%), Query Frame = 1
Query: 46 MANAGEVYVRVRNLTYLQPFSPVFVVAHTNDVSIFREGFPASDAIKIMAEDGDNSALVELLASEDVEPYICGGVMGDAPLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRLVGTEKVFPPAFDAGTEANNELCTHIPGPACPADSGNIEDGPGEGFIHVHRGFHGVGPDLGEANYDWRNPVAEVVVASSYV 654
MANAGEVYVRVRNLTYLQPFSP+FVVAHTNDVSIFREGFPASDA+KIMAEDGDNSALVELLASEDVEPYICGGVMG+APLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRLVGTEKVFPPAFDAGTEANNELCTHIPGPACPADSGN+EDGPGEGFI V RGFHGVGPDLGEANYDWRNPVAEVVVA+SYV
Sbjct: 1 MANAGEVYVRVRNLTYLQPFSPMFVVAHTNDVSIFREGFPASDAVKIMAEDGDNSALVELLASEDVEPYICGGVMGEAPLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRLVGTEKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDGPGEGFISVSRGFHGVGPDLGEANYDWRNPVAEVVVATSYV 203
BLAST of mRNA_E-siliculosus-1a_M_contig9.17081.1 vs. uniprot
Match: D7G4K4_ECTSI (Spondin domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G4K4_ECTSI) HSP 1 Score: 361 bits (926), Expect = 6.160e-125 Identity = 172/216 (79.63%), Postives = 191/216 (88.43%), Query Frame = 1
Query: 1 MVKFTPVFALASALSMANAGEVYVRVRNLTYLQPFSPVFVVAHTNDVSIFREGFPASDAIKIMAEDGDNSALVELLASEDVEPYICGGVMGDAPLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRL--VGTEKVFPPAFDAGTEANNELCTHIPGPACPADSGNIEDGPGEGFIHVHRGFHGVGPDLGEANYDWRNPVAEVVVA 642
MVKFT FALAS LS+A+A + VRVRNLTYLQPFSP+ VVAHTNDV++F+EG PASDAIK+MAEDGDNSAL+EL AS+DV PYICG V G+ P+FPG+TWRG +T+DES CPD YSVVSMLINTNDAFVGIDS+ L G+ KVFPPAFDAGTEANNELCTHIPGPACPADSGN+ED PGE FIHVHRGFHGVGPDLGEANYDWRNPVAEV +A
Sbjct: 1 MVKFTAGFALASVLSLAHATDFKVRVRNLTYLQPFSPMLVVAHTNDVALFKEGLPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESACPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDVPGEEFIHVHRGFHGVGPDLGEANYDWRNPVAEVFIA 216
BLAST of mRNA_E-siliculosus-1a_M_contig9.17081.1 vs. uniprot
Match: D7FIE5_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE5_ECTSI) HSP 1 Score: 306 bits (784), Expect = 3.080e-103 Identity = 150/221 (67.87%), Postives = 180/221 (81.45%), Query Frame = 1
Query: 1 MVKFTPVFALASALSMANA-GEVY------VRVRNLTYLQPFSPVFVVAHTNDVSIFREGFPASDAIKIMAEDGDNSALVELLASEDVEPYICGGVMGDAPLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRL-VGTEKVFPPAFDAGTEANNELCTHIPGPACPADSGNIEDGPGEGFIHVHRGFHGVGPDLGEANYDWRNPVAEVVV 639
MV FT FA+AS +S+ANA G+ Y VRVRNLTYLQPFSP +VAHT DV++F+EGFPA+DAIK+MAEDGDNSAL+EL S DV PYICG V+ + P+FPG+TWRG + VD ICP+ YSVV+MLINTNDAFVGIDS+ L +G+ K FPPAFDAGTE N+E C++IPGP CPA SGN ++GPGEG+IHVHRG HGVG DL EA+YDWRNPVAE+ +
Sbjct: 1 MVNFTAAFAMASLVSLANASGKDYNTVPFKVRVRNLTYLQPFSPPLIVAHTKDVALFKEGFPANDAIKLMAEDGDNSALLELSESSDVAPYICGVVVAEGPVFPGETWRGQLDVDPYICPNPVYSVVTMLINTNDAFVGIDSDTLELGSTKAFPPAFDAGTEVNDERCSNIPGPGCPAGSGNNQNGPGEGYIHVHRGVHGVG-DLEEASYDWRNPVAEIYI 220
BLAST of mRNA_E-siliculosus-1a_M_contig9.17081.1 vs. uniprot
Match: D7G3Z4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z4_ECTSI) HSP 1 Score: 188 bits (477), Expect = 4.920e-56 Identity = 102/197 (51.78%), Postives = 128/197 (64.97%), Query Frame = 1
Query: 70 VRVRNLTYLQPFSPVFVVAHTNDVSIFREGFPASDAIKIMAEDGDNSALVELLASEDVEPYICGGVMGDAPLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRLVGTE--KVFPPAFDAGTEANNELCTHIPGPACPADSGNIED-GPG-EGFIHVHRGFHGVGPDLGEANYDWRNPVAEVVVASS 648
VRV NLT+ Q FSP +VAH +F G A AIK+MAEDG+N ++ + E CG + PL PG TW G +T D C + YSVV+ L NTNDAF+GID ++ + K+FPPAFDAGTE NNE CT +PG ACPA + E+ G G EGFIHVHRG +GVG DL +A+Y W+NPVAEVVV+ +
Sbjct: 77 VRVTNLTFKQDFSPPIIVAHEKGSHLFPVGGKARPAIKLMAEDGNNRNIMAIATREG---GFCGFAAAEGPLLPGKTWNGEITFDTDKCKEPVYSVVAKLTNTNDAFMGIDGSKFLDKHPSKLFPPAFDAGTEKNNEKCTCMPGRACPASPKSRENHGLGSEGFIHVHRGINGVG-DLSKADYGWKNPVAEVVVSKA 269
BLAST of mRNA_E-siliculosus-1a_M_contig9.17081.1 vs. uniprot
Match: D7G413_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G413_ECTSI) HSP 1 Score: 185 bits (470), Expect = 7.360e-56 Identity = 103/196 (52.55%), Postives = 127/196 (64.80%), Query Frame = 1
Query: 70 VRVRNLTYLQPFSPVFVVAHTNDVSIFREGFPASDAIKIMAEDGDNSALVELLASEDVEPYICGGVMGDAPLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRLVGTE--KVFPPAFDAGTEANNELCTHIPGPACPADSGNIEDGPG---EGFIHVHRGFHGVGPDLGEANYDWRNPVAEVVVA 642
VRV NLT+ Q FSP +VAH +F +G A AIK MAE+G N +E++A+ E CG + PL PG TW G +T D + C YSVV+ L NTNDAF+GID ++ + K+FPPAFDAGTE NNE CT I G ACPA E+ G EGFIHVHRG +GVG DL +A+YDW+NPVAEVVV+
Sbjct: 6 VRVTNLTFKQDFSPPIIVAHEKGSPLFSKGRKARGAIKRMAEEGVNR-FIEIIATR--EDGFCGFAAAEGPLLPGKTWNGEITFDANKCKRPVYSVVAKLTNTNDAFMGIDGSKFLDKRPSKLFPPAFDAGTEKNNEKCTCIRGRACPASPKPRENLGGRGSEGFIHVHRGINGVG-DLSQADYDWKNPVAEVVVS 197
BLAST of mRNA_E-siliculosus-1a_M_contig9.17081.1 vs. uniprot
Match: D7G405_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G405_ECTSI) HSP 1 Score: 179 bits (455), Expect = 1.920e-53 Identity = 107/216 (49.54%), Postives = 134/216 (62.04%), Query Frame = 1
Query: 40 LSMANAGEVY--------VRVRNLTYLQPFSPVFVVAHTNDVS-IFREGFPASDAIKIMAEDGDNSALVELLASEDVEPYICGGVMGDAPLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRLVGT--EKVFPPAFDAGTEANNELCTHIPGPACPADSGNIED-GPG-EGFIHVHRGFHGVGPDLGEANYDWRNPVAEVVVASS 648
LS+A+ G VRV NLT+ Q FSP +VAH +F G A AIK MAE+G N +V+++A+ E CG + + PL PG TW G +T D + C + YSVV+ L NTNDAF+GID ++ + K FPPAFDAGTE NNE CT +PG ACPA E+ G G EGFIHVHRG GVG DL +A+Y W NPVAEVVV+ +
Sbjct: 2 LSLASGGSTSGSSMKTYKVRVTNLTFKQDFSPPIIVAHEKGSRPLFSMGGKARPAIKRMAEEGVNG-MVKVIATR--ESGFCGFAVAEGPLLPGKTWNGEITFDTNKCKEPVYSVVAKLTNTNDAFMGIDGSKFLDKCPSKRFPPAFDAGTEKNNEKCTCMPGRACPASPKTRENHGRGSEGFIHVHRGIDGVG-DLSKADYGWNNPVAEVVVSKA 213
BLAST of mRNA_E-siliculosus-1a_M_contig9.17081.1 vs. uniprot
Match: D7G3Z6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z6_ECTSI) HSP 1 Score: 162 bits (410), Expect = 1.850e-46 Identity = 104/233 (44.64%), Postives = 138/233 (59.23%), Query Frame = 1
Query: 1 MVKFTPVFALASALSMANAGEVY--------VRVRNLTYLQPFSPVFVVAHTNDVS-IFREGFPASDAIKIMAEDGDNSALVELLASEDVEPYICGGVMGDAP--LFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRLVG---TEKVFPPAFDAGTEANNELCTHIPGPACPADSGNIEDGPG---EGFIHVHRGFHGVGPDLGEANYDWRNPVAEVVVASS 648
MVKF ALAS LS+A+ ++ VRV NLT+ Q FS +VAH +F EG A +AI ++AE+G S V+ +A+ E CG ++ +FPG TW G + D + C D YSVV+ L NTNDAF+GI ++ K FPPAFDAG+E NNE CT +PG ACP + + + G EGFIHVHRGF G+G DL + +Y W+NPVA VVV+ +
Sbjct: 1 MVKFAFGLALASMLSLASGSKMRGSRMQTYKVRVTNLTFKQDFSAAIIVAHEKGSRPLFSEGAKARNAISMLAEEG-LSGNVQNIATR--ERGFCGFAAPESKGLIFPGKTWEGKIQFDANKCKDPVYSVVAKLDNTNDAFMGIAGSKFPAGSCPSKHFPPAFDAGSETNNEKCTCMPGRACPKGTRDARERHGRNSEGFIHVHRGFQGIG-DLSK-DYGWQNPVAVVVVSKA 228
BLAST of mRNA_E-siliculosus-1a_M_contig9.17081.1 vs. uniprot
Match: A0A433PQD1_9FUNG (Spondin domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PQD1_9FUNG) HSP 1 Score: 151 bits (381), Expect = 4.130e-42 Identity = 90/216 (41.67%), Postives = 124/216 (57.41%), Query Frame = 1
Query: 13 TPVFALASALSMANAGEVY-VRVRNLTYLQPFSPVFVVAHTNDVSIFREGFPASDAIKIMAEDGDNSALVELLASEDVEPYICGGVMGDAPLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRLVG--TEKVFPPAFDAGTEANNELCTHIPGPACPADSGNIEDGPGEGFIHVHRGFHGVG---PDLGEANYDWRNPVAEVVVA 642
T + A AL G+ + + V+NL YLQPFSPV V H + +F+ G PAS A++ +AE GD S V L +D ICG + P T++G +T+ + C + S+V+ML TNDAF GI++ L G +++ PA+DAGTE NNE C ++ G CP G GEGF+HVHRG HG+ P L +YDWRNPVA + V+
Sbjct: 10 TTLILAAVALPTEYVGKTFDITVQNLAYLQPFSPVLAVIHEPSIYLFQLGTPASAALRAVAEGGDPSKFVALF--QDGLEGICGWSVAPGKTLPSTTYKGTVTISKP-CTNPHISIVNMLGITNDAFTGINTIPLYGELSKRFEVPAYDAGTEENNEDCQYVFG--CPGSPNLDTPGLGEGFVHVHRGVHGLNVSKPGL-SVDYDWRNPVAYITVS 219
BLAST of mRNA_E-siliculosus-1a_M_contig9.17081.1 vs. uniprot
Match: A0A433DJ30_9FUNG (Spondin domain-containing protein n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433DJ30_9FUNG) HSP 1 Score: 140 bits (353), Expect = 5.560e-38 Identity = 88/215 (40.93%), Postives = 120/215 (55.81%), Query Frame = 1
Query: 22 FALASALSMANAGEVY-VRVRNLTYLQPFSPVFVVAHTNDVSIFREGFPASDAIKIMAEDGDNSALVELLASEDVEPYICGGVMGDAPLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRLVGTEKVFPP--AFDAGTEANNELCTHIPGPACPADSGNIEDGPGEGFIHVHRGFHGVG---PDLGEANYDWRNPVAEVVVASS 648
F +A A + + + + + V NL+Y Q F+PV V H V+IF+ G PAS ++ +AEDG+ + V+L E ICG +G FPG T+ G +T+ + C D S+VSML +NDAF GI S L K+ A+DAGTE NNE C ++ AC G GEGF+HVHRG HG+ P L YDWR PVA + V+S+
Sbjct: 13 FLVAIASPVDHVAQTFAITVENLSYKQIFTPVLTVIHEPSVTIFKTGTPASLELQYVAEDGNATTFVQLF--ESGLSGICGWSVGSELTFPGKTYNGNVTITKP-CQDPHISIVSMLGISNDAFTGISSVPLDVQHKISEQVTAYDAGTEENNEDCVYVG--ACAGSHNLRTPGLGEGFVHVHRGIHGLNVTKPGL-SVEYDWRFPVAYITVSST 221
BLAST of mRNA_E-siliculosus-1a_M_contig9.17081.1 vs. uniprot
Match: A0A7S2X629_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X629_9EUKA) HSP 1 Score: 136 bits (342), Expect = 2.680e-36 Identity = 89/222 (40.09%), Postives = 118/222 (53.15%), Query Frame = 1
Query: 37 ALSMANAGEVYV-RVRNLTYLQPFSPVFVVAHTNDVS-IFREGFPASDAIKIMAEDGDNSALVELL-ASEDVEPYICGGVMGDAPLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRLVGTEK--VFPPAFDAGTEANNELCTHIPGPACPADSGNIE-DGPGEGFIHVHRGFHGV---------------GPDLGEANYDWRNPVAEVVV 639
A + A A YV + N + QPFS FV H +D ++ G AS+ + I+AEDG+ LV+ ASE V AP F GDT + V+E+ S+ +M INTND F+G++ ++ T K + P D+GTEANNELCTHIPGPAC DSGN+ + EG +HVHRGF G+ G L A Y W NP+A VV+
Sbjct: 1 AQASAQASTEYVISITNAAFQQPFSGYFVAVHNSDAPPLYVLGEAASEELAILAEDGNPMPLVQAYNASEGVRETFA--FTDGAPYFAGDTASIAVDVNENY---PYVSLATMAINTNDCFMGLNGVKVFNTFKRVINLPGLDSGTEANNELCTHIPGPACLPDSGNLRANETSEGLVHVHRGFIGINEGNDDLTPAELGASGQPLSSAGYTWLNPMARVVI 217 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17081.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig9.17081.1 >prot_E-siliculosus-1a_M_contig9.17081.1 ID=prot_E-siliculosus-1a_M_contig9.17081.1|Name=mRNA_E-siliculosus-1a_M_contig9.17081.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=219bp MVKFTPVFALASALSMANAGEVYVRVRNLTYLQPFSPVFVVAHTNDVSIFback to top mRNA from alignment at E-siliculosus-1a_M_contig9:1843311..1845925- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig9.17081.1 ID=mRNA_E-siliculosus-1a_M_contig9.17081.1|Name=mRNA_E-siliculosus-1a_M_contig9.17081.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2615bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:1843311..1845925- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig9:1843311..1845925- >mRNA_E-siliculosus-1a_M_contig9.17081.1 ID=mRNA_E-siliculosus-1a_M_contig9.17081.1|Name=mRNA_E-siliculosus-1a_M_contig9.17081.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1314bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:1843311..1845925- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |