mRNA_E-siliculosus-1a_M_contig9.17081.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.17081.1
Unique NamemRNA_E-siliculosus-1a_M_contig9.17081.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.17081.1 vs. uniprot
Match: D7G4K3_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K3_ECTSI)

HSP 1 Score: 410 bits (1055), Expect = 7.860e-145
Identity = 196/203 (96.55%), Postives = 201/203 (99.01%), Query Frame = 1
Query:   46 MANAGEVYVRVRNLTYLQPFSPVFVVAHTNDVSIFREGFPASDAIKIMAEDGDNSALVELLASEDVEPYICGGVMGDAPLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRLVGTEKVFPPAFDAGTEANNELCTHIPGPACPADSGNIEDGPGEGFIHVHRGFHGVGPDLGEANYDWRNPVAEVVVASSYV 654
            MANAGEVYVRVRNLTYLQPFSP+FVVAHTNDVSIFREGFPASDA+KIMAEDGDNSALVELLASEDVEPYICGGVMG+APLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRLVGTEKVFPPAFDAGTEANNELCTHIPGPACPADSGN+EDGPGEGFI V RGFHGVGPDLGEANYDWRNPVAEVVVA+SYV
Sbjct:    1 MANAGEVYVRVRNLTYLQPFSPMFVVAHTNDVSIFREGFPASDAVKIMAEDGDNSALVELLASEDVEPYICGGVMGEAPLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRLVGTEKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDGPGEGFISVSRGFHGVGPDLGEANYDWRNPVAEVVVATSYV 203          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17081.1 vs. uniprot
Match: D7G4K4_ECTSI (Spondin domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G4K4_ECTSI)

HSP 1 Score: 361 bits (926), Expect = 6.160e-125
Identity = 172/216 (79.63%), Postives = 191/216 (88.43%), Query Frame = 1
Query:    1 MVKFTPVFALASALSMANAGEVYVRVRNLTYLQPFSPVFVVAHTNDVSIFREGFPASDAIKIMAEDGDNSALVELLASEDVEPYICGGVMGDAPLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRL--VGTEKVFPPAFDAGTEANNELCTHIPGPACPADSGNIEDGPGEGFIHVHRGFHGVGPDLGEANYDWRNPVAEVVVA 642
            MVKFT  FALAS LS+A+A +  VRVRNLTYLQPFSP+ VVAHTNDV++F+EG PASDAIK+MAEDGDNSAL+EL AS+DV PYICG V G+ P+FPG+TWRG +T+DES CPD  YSVVSMLINTNDAFVGIDS+ L   G+ KVFPPAFDAGTEANNELCTHIPGPACPADSGN+ED PGE FIHVHRGFHGVGPDLGEANYDWRNPVAEV +A
Sbjct:    1 MVKFTAGFALASVLSLAHATDFKVRVRNLTYLQPFSPMLVVAHTNDVALFKEGLPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESACPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDVPGEEFIHVHRGFHGVGPDLGEANYDWRNPVAEVFIA 216          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17081.1 vs. uniprot
Match: D7FIE5_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE5_ECTSI)

HSP 1 Score: 306 bits (784), Expect = 3.080e-103
Identity = 150/221 (67.87%), Postives = 180/221 (81.45%), Query Frame = 1
Query:    1 MVKFTPVFALASALSMANA-GEVY------VRVRNLTYLQPFSPVFVVAHTNDVSIFREGFPASDAIKIMAEDGDNSALVELLASEDVEPYICGGVMGDAPLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRL-VGTEKVFPPAFDAGTEANNELCTHIPGPACPADSGNIEDGPGEGFIHVHRGFHGVGPDLGEANYDWRNPVAEVVV 639
            MV FT  FA+AS +S+ANA G+ Y      VRVRNLTYLQPFSP  +VAHT DV++F+EGFPA+DAIK+MAEDGDNSAL+EL  S DV PYICG V+ + P+FPG+TWRG + VD  ICP+  YSVV+MLINTNDAFVGIDS+ L +G+ K FPPAFDAGTE N+E C++IPGP CPA SGN ++GPGEG+IHVHRG HGVG DL EA+YDWRNPVAE+ +
Sbjct:    1 MVNFTAAFAMASLVSLANASGKDYNTVPFKVRVRNLTYLQPFSPPLIVAHTKDVALFKEGFPANDAIKLMAEDGDNSALLELSESSDVAPYICGVVVAEGPVFPGETWRGQLDVDPYICPNPVYSVVTMLINTNDAFVGIDSDTLELGSTKAFPPAFDAGTEVNDERCSNIPGPGCPAGSGNNQNGPGEGYIHVHRGVHGVG-DLEEASYDWRNPVAEIYI 220          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17081.1 vs. uniprot
Match: D7G3Z4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z4_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 4.920e-56
Identity = 102/197 (51.78%), Postives = 128/197 (64.97%), Query Frame = 1
Query:   70 VRVRNLTYLQPFSPVFVVAHTNDVSIFREGFPASDAIKIMAEDGDNSALVELLASEDVEPYICGGVMGDAPLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRLVGTE--KVFPPAFDAGTEANNELCTHIPGPACPADSGNIED-GPG-EGFIHVHRGFHGVGPDLGEANYDWRNPVAEVVVASS 648
            VRV NLT+ Q FSP  +VAH     +F  G  A  AIK+MAEDG+N  ++ +   E      CG    + PL PG TW G +T D   C +  YSVV+ L NTNDAF+GID ++ +     K+FPPAFDAGTE NNE CT +PG ACPA   + E+ G G EGFIHVHRG +GVG DL +A+Y W+NPVAEVVV+ +
Sbjct:   77 VRVTNLTFKQDFSPPIIVAHEKGSHLFPVGGKARPAIKLMAEDGNNRNIMAIATREG---GFCGFAAAEGPLLPGKTWNGEITFDTDKCKEPVYSVVAKLTNTNDAFMGIDGSKFLDKHPSKLFPPAFDAGTEKNNEKCTCMPGRACPASPKSRENHGLGSEGFIHVHRGINGVG-DLSKADYGWKNPVAEVVVSKA 269          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17081.1 vs. uniprot
Match: D7G413_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G413_ECTSI)

HSP 1 Score: 185 bits (470), Expect = 7.360e-56
Identity = 103/196 (52.55%), Postives = 127/196 (64.80%), Query Frame = 1
Query:   70 VRVRNLTYLQPFSPVFVVAHTNDVSIFREGFPASDAIKIMAEDGDNSALVELLASEDVEPYICGGVMGDAPLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRLVGTE--KVFPPAFDAGTEANNELCTHIPGPACPADSGNIEDGPG---EGFIHVHRGFHGVGPDLGEANYDWRNPVAEVVVA 642
            VRV NLT+ Q FSP  +VAH     +F +G  A  AIK MAE+G N   +E++A+   E   CG    + PL PG TW G +T D + C    YSVV+ L NTNDAF+GID ++ +     K+FPPAFDAGTE NNE CT I G ACPA     E+  G   EGFIHVHRG +GVG DL +A+YDW+NPVAEVVV+
Sbjct:    6 VRVTNLTFKQDFSPPIIVAHEKGSPLFSKGRKARGAIKRMAEEGVNR-FIEIIATR--EDGFCGFAAAEGPLLPGKTWNGEITFDANKCKRPVYSVVAKLTNTNDAFMGIDGSKFLDKRPSKLFPPAFDAGTEKNNEKCTCIRGRACPASPKPRENLGGRGSEGFIHVHRGINGVG-DLSQADYDWKNPVAEVVVS 197          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17081.1 vs. uniprot
Match: D7G405_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G405_ECTSI)

HSP 1 Score: 179 bits (455), Expect = 1.920e-53
Identity = 107/216 (49.54%), Postives = 134/216 (62.04%), Query Frame = 1
Query:   40 LSMANAGEVY--------VRVRNLTYLQPFSPVFVVAHTNDVS-IFREGFPASDAIKIMAEDGDNSALVELLASEDVEPYICGGVMGDAPLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRLVGT--EKVFPPAFDAGTEANNELCTHIPGPACPADSGNIED-GPG-EGFIHVHRGFHGVGPDLGEANYDWRNPVAEVVVASS 648
            LS+A+ G           VRV NLT+ Q FSP  +VAH      +F  G  A  AIK MAE+G N  +V+++A+   E   CG  + + PL PG TW G +T D + C +  YSVV+ L NTNDAF+GID ++ +     K FPPAFDAGTE NNE CT +PG ACPA     E+ G G EGFIHVHRG  GVG DL +A+Y W NPVAEVVV+ +
Sbjct:    2 LSLASGGSTSGSSMKTYKVRVTNLTFKQDFSPPIIVAHEKGSRPLFSMGGKARPAIKRMAEEGVNG-MVKVIATR--ESGFCGFAVAEGPLLPGKTWNGEITFDTNKCKEPVYSVVAKLTNTNDAFMGIDGSKFLDKCPSKRFPPAFDAGTEKNNEKCTCMPGRACPASPKTRENHGRGSEGFIHVHRGIDGVG-DLSKADYGWNNPVAEVVVSKA 213          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17081.1 vs. uniprot
Match: D7G3Z6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z6_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 1.850e-46
Identity = 104/233 (44.64%), Postives = 138/233 (59.23%), Query Frame = 1
Query:    1 MVKFTPVFALASALSMANAGEVY--------VRVRNLTYLQPFSPVFVVAHTNDVS-IFREGFPASDAIKIMAEDGDNSALVELLASEDVEPYICGGVMGDAP--LFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRLVG---TEKVFPPAFDAGTEANNELCTHIPGPACPADSGNIEDGPG---EGFIHVHRGFHGVGPDLGEANYDWRNPVAEVVVASS 648
            MVKF    ALAS LS+A+  ++         VRV NLT+ Q FS   +VAH      +F EG  A +AI ++AE+G  S  V+ +A+   E   CG    ++   +FPG TW G +  D + C D  YSVV+ L NTNDAF+GI  ++        K FPPAFDAG+E NNE CT +PG ACP  + +  +  G   EGFIHVHRGF G+G DL + +Y W+NPVA VVV+ +
Sbjct:    1 MVKFAFGLALASMLSLASGSKMRGSRMQTYKVRVTNLTFKQDFSAAIIVAHEKGSRPLFSEGAKARNAISMLAEEG-LSGNVQNIATR--ERGFCGFAAPESKGLIFPGKTWEGKIQFDANKCKDPVYSVVAKLDNTNDAFMGIAGSKFPAGSCPSKHFPPAFDAGSETNNEKCTCMPGRACPKGTRDARERHGRNSEGFIHVHRGFQGIG-DLSK-DYGWQNPVAVVVVSKA 228          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17081.1 vs. uniprot
Match: A0A433PQD1_9FUNG (Spondin domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PQD1_9FUNG)

HSP 1 Score: 151 bits (381), Expect = 4.130e-42
Identity = 90/216 (41.67%), Postives = 124/216 (57.41%), Query Frame = 1
Query:   13 TPVFALASALSMANAGEVY-VRVRNLTYLQPFSPVFVVAHTNDVSIFREGFPASDAIKIMAEDGDNSALVELLASEDVEPYICGGVMGDAPLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRLVG--TEKVFPPAFDAGTEANNELCTHIPGPACPADSGNIEDGPGEGFIHVHRGFHGVG---PDLGEANYDWRNPVAEVVVA 642
            T +   A AL     G+ + + V+NL YLQPFSPV  V H   + +F+ G PAS A++ +AE GD S  V L   +D    ICG  +      P  T++G +T+ +  C +   S+V+ML  TNDAF GI++  L G  +++   PA+DAGTE NNE C ++ G  CP        G GEGF+HVHRG HG+    P L   +YDWRNPVA + V+
Sbjct:   10 TTLILAAVALPTEYVGKTFDITVQNLAYLQPFSPVLAVIHEPSIYLFQLGTPASAALRAVAEGGDPSKFVALF--QDGLEGICGWSVAPGKTLPSTTYKGTVTISKP-CTNPHISIVNMLGITNDAFTGINTIPLYGELSKRFEVPAYDAGTEENNEDCQYVFG--CPGSPNLDTPGLGEGFVHVHRGVHGLNVSKPGL-SVDYDWRNPVAYITVS 219          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17081.1 vs. uniprot
Match: A0A433DJ30_9FUNG (Spondin domain-containing protein n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433DJ30_9FUNG)

HSP 1 Score: 140 bits (353), Expect = 5.560e-38
Identity = 88/215 (40.93%), Postives = 120/215 (55.81%), Query Frame = 1
Query:   22 FALASALSMANAGEVY-VRVRNLTYLQPFSPVFVVAHTNDVSIFREGFPASDAIKIMAEDGDNSALVELLASEDVEPYICGGVMGDAPLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRLVGTEKVFPP--AFDAGTEANNELCTHIPGPACPADSGNIEDGPGEGFIHVHRGFHGVG---PDLGEANYDWRNPVAEVVVASS 648
            F +A A  + +  + + + V NL+Y Q F+PV  V H   V+IF+ G PAS  ++ +AEDG+ +  V+L   E     ICG  +G    FPG T+ G +T+ +  C D   S+VSML  +NDAF GI S  L    K+     A+DAGTE NNE C ++   AC         G GEGF+HVHRG HG+    P L    YDWR PVA + V+S+
Sbjct:   13 FLVAIASPVDHVAQTFAITVENLSYKQIFTPVLTVIHEPSVTIFKTGTPASLELQYVAEDGNATTFVQLF--ESGLSGICGWSVGSELTFPGKTYNGNVTITKP-CQDPHISIVSMLGISNDAFTGISSVPLDVQHKISEQVTAYDAGTEENNEDCVYVG--ACAGSHNLRTPGLGEGFVHVHRGIHGLNVTKPGL-SVEYDWRFPVAYITVSST 221          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17081.1 vs. uniprot
Match: A0A7S2X629_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X629_9EUKA)

HSP 1 Score: 136 bits (342), Expect = 2.680e-36
Identity = 89/222 (40.09%), Postives = 118/222 (53.15%), Query Frame = 1
Query:   37 ALSMANAGEVYV-RVRNLTYLQPFSPVFVVAHTNDVS-IFREGFPASDAIKIMAEDGDNSALVELL-ASEDVEPYICGGVMGDAPLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRLVGTEK--VFPPAFDAGTEANNELCTHIPGPACPADSGNIE-DGPGEGFIHVHRGFHGV---------------GPDLGEANYDWRNPVAEVVV 639
            A + A A   YV  + N  + QPFS  FV  H +D   ++  G  AS+ + I+AEDG+   LV+   ASE V           AP F GDT    + V+E+       S+ +M INTND F+G++  ++  T K  +  P  D+GTEANNELCTHIPGPAC  DSGN+  +   EG +HVHRGF G+               G  L  A Y W NP+A VV+
Sbjct:    1 AQASAQASTEYVISITNAAFQQPFSGYFVAVHNSDAPPLYVLGEAASEELAILAEDGNPMPLVQAYNASEGVRETFA--FTDGAPYFAGDTASIAVDVNENY---PYVSLATMAINTNDCFMGLNGVKVFNTFKRVINLPGLDSGTEANNELCTHIPGPACLPDSGNLRANETSEGLVHVHRGFIGINEGNDDLTPAELGASGQPLSSAGYTWLNPMARVVI 217          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17081.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4K3_ECTSI7.860e-14596.55Spondin domain-containing protein n=1 Tax=Ectocarp... [more]
D7G4K4_ECTSI6.160e-12579.63Spondin domain-containing protein n=3 Tax=Ectocarp... [more]
D7FIE5_ECTSI3.080e-10367.87Spondin domain-containing protein n=1 Tax=Ectocarp... [more]
D7G3Z4_ECTSI4.920e-5651.78Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7G413_ECTSI7.360e-5652.55Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7G405_ECTSI1.920e-5349.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3Z6_ECTSI1.850e-4644.64Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A433PQD1_9FUNG4.130e-4241.67Spondin domain-containing protein n=1 Tax=Endogone... [more]
A0A433DJ30_9FUNG5.560e-3840.93Spondin domain-containing protein n=2 Tax=Jimgerde... [more]
A0A7S2X629_9EUKA2.680e-3640.09Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:1843311..1845925 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size657
Model size657
Exons6
Ec32 orthologEc-07_000300.1
Ec32 ortholog descriptionSpondin, N-terminal
Hectar predicted targeting categorysignal peptide
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
EggNOG OGs28TMI@1,2S5Q9@2759
Seed eggNOG ortholog2880.D7G4K3
Seed ortholog evalue2.7e-112
Seed ortholog score411.4
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.17081.1prot_E-siliculosus-1a_M_contig9.17081.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig9 1843311..1845925 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936411.6970637-CDS-E-siliculosus-1a_M_contig9:1843310..18435131622936411.6970637-CDS-E-siliculosus-1a_M_contig9:1843310..1843513Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 1843311..1843513 -
1696251066.047579-CDS-E-siliculosus-1a_M_contig9:1843310..18435131696251066.047579-CDS-E-siliculosus-1a_M_contig9:1843310..1843513Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 1843311..1843513 -
1622936411.7133284-CDS-E-siliculosus-1a_M_contig9:1843847..18439311622936411.7133284-CDS-E-siliculosus-1a_M_contig9:1843847..1843931Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 1843848..1843931 -
1696251066.063094-CDS-E-siliculosus-1a_M_contig9:1843847..18439311696251066.063094-CDS-E-siliculosus-1a_M_contig9:1843847..1843931Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 1843848..1843931 -
1622936411.7299042-CDS-E-siliculosus-1a_M_contig9:1844223..18443741622936411.7299042-CDS-E-siliculosus-1a_M_contig9:1844223..1844374Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 1844224..1844374 -
1696251066.0740628-CDS-E-siliculosus-1a_M_contig9:1844223..18443741696251066.0740628-CDS-E-siliculosus-1a_M_contig9:1844223..1844374Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 1844224..1844374 -
1622936411.7459795-CDS-E-siliculosus-1a_M_contig9:1844771..18448551622936411.7459795-CDS-E-siliculosus-1a_M_contig9:1844771..1844855Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 1844772..1844855 -
1696251066.0852666-CDS-E-siliculosus-1a_M_contig9:1844771..18448551696251066.0852666-CDS-E-siliculosus-1a_M_contig9:1844771..1844855Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 1844772..1844855 -
1622936411.763245-CDS-E-siliculosus-1a_M_contig9:1845543..18456091622936411.763245-CDS-E-siliculosus-1a_M_contig9:1845543..1845609Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 1845544..1845609 -
1696251066.0966153-CDS-E-siliculosus-1a_M_contig9:1845543..18456091696251066.0966153-CDS-E-siliculosus-1a_M_contig9:1845543..1845609Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 1845544..1845609 -
1622936411.778128-CDS-E-siliculosus-1a_M_contig9:1845856..18459251622936411.778128-CDS-E-siliculosus-1a_M_contig9:1845856..1845925Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 1845857..1845925 -
1696251066.107586-CDS-E-siliculosus-1a_M_contig9:1845856..18459251696251066.107586-CDS-E-siliculosus-1a_M_contig9:1845856..1845925Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 1845857..1845925 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig9.17081.1

>prot_E-siliculosus-1a_M_contig9.17081.1 ID=prot_E-siliculosus-1a_M_contig9.17081.1|Name=mRNA_E-siliculosus-1a_M_contig9.17081.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=219bp
MVKFTPVFALASALSMANAGEVYVRVRNLTYLQPFSPVFVVAHTNDVSIF
REGFPASDAIKIMAEDGDNSALVELLASEDVEPYICGGVMGDAPLFPGDT
WRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRLVGTEKVFPPAFD
AGTEANNELCTHIPGPACPADSGNIEDGPGEGFIHVHRGFHGVGPDLGEA
NYDWRNPVAEVVVASSYV*
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mRNA from alignment at E-siliculosus-1a_M_contig9:1843311..1845925-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig9.17081.1 ID=mRNA_E-siliculosus-1a_M_contig9.17081.1|Name=mRNA_E-siliculosus-1a_M_contig9.17081.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2615bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:1843311..1845925- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGTCAAGTTTACCCCAGTGTTCGCTCTCGCTTCGGCGCTCTCTATGGC CAACGCCGGTGAAGTCTATGTAAGTACAGCCAAGTACAGCCCGCAAATCC TTGGGATGCGGGTGAACCTGCACACATCCGGATTCAACCACAGAACTGCT GTGTGTATGCTGCTCGTGCTCCTGCTGTTGCCACACTCTACTGTACGACG ACGACCGCTCGCTGTGTGAAAGGTTGTTCATGAATCTCTGTTCTCGTCCT CTCGCAATTACACGTTTTCGGGGGGCAATTGTTCTGCTCGTGTCCGGCTA TGCGTGCCTTTCACAGGTTCGCGTGAGGAACCTGACCTACTTGCAGCCCT TCTCGCCCGTGTTCGTCGTGGCGCACACCAATGTGAGTTACACTGTTACT GTTGTGGGATACGCGCTCGCTCACAGGGTTTGCTGCGACCTCTATCGATA CGCTTAGAAATTTGTTATTGGCTCTCTAAAATTGATGGTATGCATACTCT GGGATCGATTTCTTCAGTAGCTCTGCACAAGTAAATGAATGCTCACCTGA TTGAATTTGTTCGTTTATATTACCCGTGTGTGTTGTGTGTGTTGTCCGTA CATTGGCCCGTTCGATCTCTGTTCAACACATCTCTACGCTGCACTGCATG AACTGCTGTGCAGAAGAACATTGAAGGGTCATTCTATGCATTCATGAGAG ACATGAAAAGAGAGGACCCAGTCGGGCATAAAGAGAGCTTCCGCATAACC CTAAGTAAAGAAGAAAAATTGTGTTGGTTCGGTTTGGTGGGTGACAAGTC AATGAGGAACTTCAACACATCCCTTTCGACATAGTGGAATAATCTCGAAC GGATAGTCTTCTTTCTGTGTGTTTATGTTTGTGATATTGCCTAGAAAAAG ATAGCAAGCCACAACGTCCTAACACAGTCGGACTCTAAACATAGCGACAA ACTCTACCTGTATCTATGCGTGTTCGGTAGGTGTCCTCCCGCCCCATCTC TGTATCTGTAATATTATGCTGCCTGCTGTATCTAATCTTCGAAGTATTTG TGGTTTCTCTTTCTCTGCAGGACGTGTCCATTTTCAGGGAGGGCTTTCCC GCAAGCGACGCCATCAAGATTATGGCGGAGGACGGCGACAACTCGGCGCT AGTGGTACGTGCCGCTGCACACTTCACAGTTCAGTGTTGCAAAATCAAGT TCTTGGAGTCGGTGTGATTGTAATTGGCCGCTGTGACAAGTACCCGGACA CAAGTACCCTACTGTTATCGTGTACGTCCTTCTTACTTGTAGTGTTGTGT GGTTGTCGAGCCTGACGCGGGGGATGCACTGCTGATTGAGAACCCTTTGG CTTACATGGTGTAGTCTACGCCCCTCTTTAGAGGACGGTACCAGAGCTCT CTATTGAGGCAATGATCCCGTACCAAGTAGTATCCCAGGCATGTCTGAAG CCCGTCGAGTCGAGTCGAGAGCTGTTTCCTGGCGGCAACGCACGTCGTGC TGAGGTTCTAGAACACGTTCGTGCTCGCTGCTTACATGTTTGAATGATCA GGAGCTCCTGGCCTCAGAGGATGTGGAGCCGTACATCTGCGGTGGCGTGA TGGGCGATGCTCCGCTCTTCCCCGGGGACACATGGAGGGGCGTCATGACG GTCGACGAGAGCATCTGCCCCGACGCACAGTACAGCGTCGTGAGCATGCT AAGTGAGTCGTCGTCGTCGTCTCGTTTCAGAATTTCGGGAGGCAGCACAA TGTAAACACCTTGTTGTCACCATAAGCAAGAATCAAGAACGACAGAGTAG CGGCCCTATTTGTAGGGCTCCGTTCGAGCGGTACGCGTTACTGCACTGGT GCTACATATACTCTCGCCTTGGAGACACCCACTACACGACGCCTCTAACC TCTCACTCCCCGATCCTCTCCCCTGACCCTTACTCGTCGTGCCTTATCTC GCCGCTCCGCGCGCTCACAACTCCTGGTCGTGTTCCGGTCGCAGTCAACA CCAACGACGCCTTCGTGGGCATCGACTCCAACAGGCTGGTCGGAACCGAA AAGGTGTTCCCGCCGGCCTTCGATGCCGGTGAGAGAGAAAGCGGGTTGTG TGTGCTCGAATGTTCTTGTCACCATACACGGTGGTGGTAGATCATATCTA CCGATCGATACGATAAAGTGAAAACTTCTAGAACGTACTCAATGCGTGAG TTTATCGTGGTTGTATATTATGTGCTGGGGTTCAGCCTTCACGTCCCGCC TGAACGGGGGGCGGGGGATCATCTTGGTCGATATTATTTGTTTGTGTCGC TGAACAACAATCGCGAGCATTCATGCGTCTGACACACCCCTCTTCCTCTT GCCGCAACATCAACACCCAATTCTATCCACCCCCCAATGGATCGGATCCA CCGACGACACAGGTACCGAGGCCAACAACGAGCTGTGCACCCACATCCCT GGCCCTGCGTGCCCGGCCGACAGTGGCAACATCGAGGACGGACCCGGCGA AGGGTTCATCCACGTGCACCGCGGCTTCCACGGTGTGGGCCCGGACCTGG GCGAGGCGAACTACGACTGGCGCAACCCGGTCGCCGAGGTCGTCGTCGCC TCGTCCTACGTGTAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig9:1843311..1845925-

>mRNA_E-siliculosus-1a_M_contig9.17081.1 ID=mRNA_E-siliculosus-1a_M_contig9.17081.1|Name=mRNA_E-siliculosus-1a_M_contig9.17081.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1314bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:1843311..1845925- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGTCAAGTTTACCCCAGTGTTCGCTCTCGCTTCGGCGCTCTCTATGGC
CAACGCCGGTGAAGTCTATATGGTCAAGTTTACCCCAGTGTTCGCTCTCG
CTTCGGCGCTCTCTATGGCCAACGCCGGTGAAGTCTATGTTCGCGTGAGG
AACCTGACCTACTTGCAGCCCTTCTCGCCCGTGTTCGTCGTGGCGCACAC
CAATGTTCGCGTGAGGAACCTGACCTACTTGCAGCCCTTCTCGCCCGTGT
TCGTCGTGGCGCACACCAATGACGTGTCCATTTTCAGGGAGGGCTTTCCC
GCAAGCGACGCCATCAAGATTATGGCGGAGGACGGCGACAACTCGGCGCT
AGTGGACGTGTCCATTTTCAGGGAGGGCTTTCCCGCAAGCGACGCCATCA
AGATTATGGCGGAGGACGGCGACAACTCGGCGCTAGTGGAGCTCCTGGCC
TCAGAGGATGTGGAGCCGTACATCTGCGGTGGCGTGATGGGCGATGCTCC
GCTCTTCCCCGGGGACACATGGAGGGGCGTCATGACGGTCGACGAGAGCA
TCTGCCCCGACGCACAGTACAGCGTCGTGAGCATGCTAAGAGCTCCTGGC
CTCAGAGGATGTGGAGCCGTACATCTGCGGTGGCGTGATGGGCGATGCTC
CGCTCTTCCCCGGGGACACATGGAGGGGCGTCATGACGGTCGACGAGAGC
ATCTGCCCCGACGCACAGTACAGCGTCGTGAGCATGCTAATCAACACCAA
CGACGCCTTCGTGGGCATCGACTCCAACAGGCTGGTCGGAACCGAAAAGG
TGTTCCCGCCGGCCTTCGATGCCGTCAACACCAACGACGCCTTCGTGGGC
ATCGACTCCAACAGGCTGGTCGGAACCGAAAAGGTGTTCCCGCCGGCCTT
CGATGCCGGTACCGAGGCCAACAACGAGCTGTGCACCCACATCCCTGGCC
CTGCGTGCCCGGCCGACAGTGGCAACATCGAGGACGGACCCGGCGAAGGG
TTCATCCACGTGCACCGCGGCTTCCACGGTGTGGGCCCGGACCTGGGCGA
GGCGAACTACGACTGGCGCAACCCGGTCGCCGAGGTCGTCGTCGCCTCGT
CCTACGTGTAGGTACCGAGGCCAACAACGAGCTGTGCACCCACATCCCTG
GCCCTGCGTGCCCGGCCGACAGTGGCAACATCGAGGACGGACCCGGCGAA
GGGTTCATCCACGTGCACCGCGGCTTCCACGGTGTGGGCCCGGACCTGGG
CGAGGCGAACTACGACTGGCGCAACCCGGTCGCCGAGGTCGTCGTCGCCT
CGTCCTACGTGTAG
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