mRNA_E-siliculosus-1a_M_contig9.17068.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.17068.1 vs. uniprot
Match: D7G4J0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4J0_ECTSI) HSP 1 Score: 907 bits (2343), Expect = 0.000e+0 Identity = 680/777 (87.52%), Postives = 693/777 (89.19%), Query Frame = 3
Query: 720 MNNTERSSSSGNALVDALANGGRGAGEXXXXXXXXXXXLALSPELAQKVRECRGVSSAPVVSESSLTFLRAAPGGTASGSVGPSELQQQPXXXXXXXXXXXXXXXXXXXHRGGIDTDAAAASKERLVRASAVPPATNHIENTDALVSAAAGGNGDLNSACSGCGDGGGQGTQGGGQDAAAELCGDAAASSLSDRRQDGDIKQSGDEREGTCCGHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----CLESELEERGHPSGSDGGGKASEAGGGPEEKAHPELSSVPVLLVDLARVCGFRVKGAEEADIVGGKVRAALHESFAERSEELFETGSAVHADTSTLAEEMRRRSDASSMRSSWAVVDYPAMLGGGASTSEAWSAVTTPSPCRAVEAVRMALLGTNRHLVWKRDMLEQLEAVAASERDAKEERLNAERQAELEAWRERRREQLERLIEVRPMFERRRAMAEEKLIAAGGGVDGGTGGLGDGAAADPVSAAVVQSLDAKLEGIDDLIARLEIEEGEEGYGFVPSDDXXXXXXXXXXXXYLHNGEXXXXXXXXGYDADREASQPPTETVAXXXXXXXXXXXXXXXXXXXXXXXAAKASVQPGDVANVAGAXXXXXXXXXXXXXXXXXXXTSVVEQLKAKEASGVSGNGAGGVREGGEXXXXXXXGDGSEVSPPPEMGLLDAVAAMILGRYPQDPRASSEEHFQKIAAMHQHMKDAWLEEFGRLPPMA 3038
MNNTERSSSSGNALV+ALANGG XXXXXXXXXXX ALSPELAQKVREC GVSSAPVVSESSLTFLRAAPGGTA+GSVGPSELQQQP XXXXXXXXXXXXXXXX HRGGI TDAAAA+KE LV S+VP ATNH E TD VSA AGGN DLN AC GCGD G QGTQGGGQDA AELCGDA AS+LSDRRQDGDIKQ+GDEREGTC GHR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CLES+LEERG S SDGGG+AS AGG PEEKAHPELSSVPVLLVDLARVCGFRVKGAEEADIVGGKVRAALHESFAERSEELFETGSAVHADTSTLAEEMRRRS+ASSMRSSWAVVDYPAMLGGG STSEAWSAVTTPSPCRAVEAVR ALLGTNRHLVWKRDML QLEAVA SERDAKE+RLNAERQAELEAWRERRREQLERLIEVRPMFERRRAMAEEKLIAAGGGVDGG GGLGDGAAADPVSAAVVQSLDAKLE IDDLIARLEIEEGEEGYGFVPSDDXXXXXXXXXXXXYL+NGE XXXXXXX DADREASQPPTET XXXXXXXXXXXXXXXXXXXXX KASVQPGDVANVAGAXXXXXXXXXXXXXXXXXXX SVVEQLKAKEASGVSGNG G VREG XXXXXXX GSEV+PPPEMGLLDAVAAMILGR+PQDPRASSEEHFQKIAAMHQHMKDAWLEEFGRLPPMA
Sbjct: 1 MNNTERSSSSGNALVEALANGGXXXXXXXXXXXXXXXXXALSPELAQKVRECHGVSSAPVVSESSLTFLRAAPGGTANGSVGPSELQQQPQXXXXXXXXXXXXXXXXQEHRGGIGTDAAAATKEGLVTPSSVPLATNHNETTDTPVSAVAGGNSDLNGACLGCGDRGEQGTQGGGQDACAELCGDAGASNLSDRRQDGDIKQAGDEREGTCGGHREEGGAQHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGLKATAKAAAVGGADSASSACLESKLEERGRLSASDGGGEASGAGGTPEEKAHPELSSVPVLLVDLARVCGFRVKGAEEADIVGGKVRAALHESFAERSEELFETGSAVHADTSTLAEEMRRRSEASSMRSSWAVVDYPAMLGGGVSTSEAWSAVTTPSPCRAVEAVRTALLGTNRHLVWKRDMLAQLEAVATSERDAKEKRLNAERQAELEAWRERRREQLERLIEVRPMFERRRAMAEEKLIAAGGGVDGGPGGLGDGAAADPVSAAVVQSLDAKLEDIDDLIARLEIEEGEEGYGFVPSDDXXXXXXXXXXXXYLYNGENXXXXXXXXXDADREASQPPTETAXXXXXXXXXXXXXXXXXXXXXX---TKASVQPGDVANVAGAXXXXXXXXXXXXXXXXXXXXSVVEQLKAKEASGVSGNGVGSVREGXXXXXXXXXXXGSEVTPPPEMGLLDAVAAMILGRFPQDPRASSEEHFQKIAAMHQHMKDAWLEEFGRLPPMA 774
BLAST of mRNA_E-siliculosus-1a_M_contig9.17068.1 vs. uniprot
Match: A0A6H5JAG3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAG3_9PHAE) HSP 1 Score: 862 bits (2226), Expect = 3.400e-299 Identity = 636/781 (81.43%), Postives = 648/781 (82.97%), Query Frame = 3
Query: 720 MNNTERSSSSGNALVDALANGGRGAGEXXXXXXXXXXXLALSPELAQKVRECRGVSSAPVVSESSLTFLRAAPGGTASGSVGPSELQQQPXXXXXXXXXXXXXXXXXXXHRGGIDTDAAAASKERLVRASAVPPATNHIENTDALVSAAAGGNGDLNSACSGCGDGGGQGTQGGGQDAAAELCGDAAASSLSDRRQDGDIKQSGDEREGTCCGHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----CLESELEERGHPSGSDGGGKASEAGGGPEEKAHPELSSVPVLLVDLARVCGFRVKGAEEADIVGGKVRAALHESFAERSEELFETGSAVHADTSTLAEEMRRRSDASSMRSSWAVVDYPAMLGGGASTSEAWSAVTTPSPCRAVEAVRMALLGTNRHLVWKRDMLEQLEAVAASERDAKEERLNAERQAELEAWRERRREQLERLIEVRPMFERRRAMAEEKLIAAGGG-VDGGTGGLGDGAAADPVSAAVVQSLDAKLEGIDDLIARLEIEEGEEGYGFVPSDDXXXXXXXXXXXXYLHNGEXXXXXXXXGYDADREASQPPTETVAXXXXXXXXXXXXXXXXXXXXXXX--AAKASVQPGDVANVAGAXXXXXXXXXXXXXXXXXXXTSVVEQLKAKEASGVSGNGAGGVREGGEXXXXXXXGDGSEVSPPPEMGLLDAVAAMILGRYPQDPRASSEEHFQKIAAMHQHMKDAWLEEFGRLPPMA 3038
MNNTERSSSSGNALV LANGG XXXXXXXXXXXLALSPELAQKVRECRGVSSAPVVS SSLTFLRAAPGGTA+GSVGPSELQQQP XXXXXXXXXXXXX HRGGI TDAAAA+KE L+ ASAVPPATNH E+TD LVSAAAGGNGDLN CSGCG+GGGQ TQGGGQDA AELCGDAAASSLSDRRQDG IKQ G ERE TC GHR XXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXX CLES+LEE GHPS S GGGKAS GGGPEE AHPELSSVPVLLVDLARVCGF VKGAEEA IVGGKVRAALHESFAERSEELF+TGSAVHADTSTLAEEMRRRS+ASSMRSSWAVVDYPAMLGGG STSEAWSAVTTPSPCRAVEAVR ALLGTNRHLVWKRDMLEQLEAVAASER+AKEERLNAERQAELEAWRERRREQLERLIEVRPMFERRRAMAEEKLIAAGGG VDGGTGGLGDG AADPVSAAVVQSLDAKLEGIDDLIARLEIEEGEEG+GFVPSDDXXXXXXXXXXXX XXXXXXXX XXXXXXXXXXX AAKASVQPG+VANVAGA XXXXXXXXXXXXXX SVVEQLKAKEASG S NG GGVREGG+ GDGS VSPPPEMGLLDAVAAMILGRYPQDPR SSEEHFQKIAAMHQ MKDAWLEEFGRLPPMA
Sbjct: 1 MNNTERSSSSGNALVGTLANGGXXXXXXXXXXXXXXXXLALSPELAQKVRECRGVSSAPVVSASSLTFLRAAPGGTANGSVGPSELQQQPQEXXXXXXXXXXXXXGHQAHRGGIGTDAAAATKEGLMTASAVPPATNHSEHTDTLVSAAAGGNGDLNGDCSGCGNGGGQCTQGGGQDAGAELCGDAAASSLSDRRQDGYIKQPGGERERTCGGHREXXXXXXXXXXXXXAAVVAEEGDFAEPPDSWEEFDESTVPRVASNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACLESKLEECGHPSASGGGGKASGTGGGPEENAHPELSSVPVLLVDLARVCGFHVKGAEEAGIVGGKVRAALHESFAERSEELFDTGSAVHADTSTLAEEMRRRSEASSMRSSWAVVDYPAMLGGGVSTSEAWSAVTTPSPCRAVEAVRTALLGTNRHLVWKRDMLEQLEAVAASERNAKEERLNAERQAELEAWRERRREQLERLIEVRPMFERRRAMAEEKLIAAGGGGVDGGTGGLGDGVAADPVSAAVVQSLDAKLEGIDDLIARLEIEEGEEGFGFVPSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGGTAPGQSSGGEAAKASVQPGEVANVAGAAADAXXXXXXXXXXXXXX-ASVVEQLKAKEASGFSRNGIGGVREGGKGNGGKERGDGSGVSPPPEMGLLDAVAAMILGRYPQDPRVSSEEHFQKIAAMHQDMKDAWLEEFGRLPPMA 780
BLAST of mRNA_E-siliculosus-1a_M_contig9.17068.1 vs. uniprot
Match: A0A835YPK8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPK8_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 6.870e-10 Identity = 30/47 (63.83%), Postives = 37/47 (78.72%), Query Frame = 3
Query: 2889 LLDAVAAMILGRYPQDPRASSEEHFQKIAAMHQHMKDAWLEEFGRLP 3029
L+D VAAMILGR P++PRAS EH Q +A H ++DAWL+EFGRLP
Sbjct: 112 LIDRVAAMILGRMPRNPRASDAEHLQYVAVCHARIRDAWLQEFGRLP 158 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17068.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig9.17068.1 >prot_E-siliculosus-1a_M_contig9.17068.1 ID=prot_E-siliculosus-1a_M_contig9.17068.1|Name=mRNA_E-siliculosus-1a_M_contig9.17068.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=774bp MNNTERSSSSGNALVDALANGGRGAGEAAAGGFGLGVGLALSPELAQKVRback to top mRNA from alignment at E-siliculosus-1a_M_contig9:1666349..1674950- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig9.17068.1 ID=mRNA_E-siliculosus-1a_M_contig9.17068.1|Name=mRNA_E-siliculosus-1a_M_contig9.17068.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=8602bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:1666349..1674950- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig9:1666349..1674950- >mRNA_E-siliculosus-1a_M_contig9.17068.1 ID=mRNA_E-siliculosus-1a_M_contig9.17068.1|Name=mRNA_E-siliculosus-1a_M_contig9.17068.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=4644bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:1666349..1674950- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |