mRNA_E-siliculosus-1a_M_contig9.17054.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.17054.1
Unique NamemRNA_E-siliculosus-1a_M_contig9.17054.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17054.1 vs. uniprot
Match: A0A6H5KKV6_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKV6_9PHAE)

HSP 1 Score: 818 bits (2113), Expect = 1.510e-294
Identity = 401/423 (94.80%), Postives = 408/423 (96.45%), Query Frame = 3 
Query:   69 MAGRLCCSLAILLTAGAASSAVGTKHQHQQHGRLLQTGSSESPPSLAVEGADTWVGRPQANRCSDLDQSVFSTGMQCGPPLSPPCFQSYSTECLSNGGIYVFDGECSLQDSSELLAADQGYEVSRTSVGDQDAAWALRNETAQLGMLADTYASACMFVHVGKGLKRPCAVNQPRWNDGANHLLVDMSDKGRASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVAPLDRGFFLTTKCTLYISGHGSEERISLLPLHDKEHGVVVAMHCFEEHQEHLLPENAEFCQALRDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPRAQLEEMQRKSLEAYGRMFGADVNDFRPSAKIILGILRRRLG 1337
            M G LCCSLAILLTAGAASSAVGTK QHQQHGR LQTGS  SPPSLAVEGAD WVGRPQANRCSDLDQSVFSTGMQCGPPLSPPCFQSYSTECLSNGGIYVFDGECSLQDSSELLAADQGYE SRT VGDQDAA  LRNETAQLGMLADTYASACMFVHVGKGLKRPCAVNQPRWN+GANHLLVDMSDKGRASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVAPLDR FFLTTKCTLY+SGHGSEERISLLPL D+EHGVVV MHCFEEHQEHLLPENAEFCQAL+DQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAG+IPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMM TLLAVPRAQLEEMQRKSLEAYG+MFGADVNDFRPSAKIILGI+RRRLG
Sbjct:    1 MVGLLCCSLAILLTAGAASSAVGTKQQHQQHGRHLQTGSLASPPSLAVEGADPWVGRPQANRCSDLDQSVFSTGMQCGPPLSPPCFQSYSTECLSNGGIYVFDGECSLQDSSELLAADQGYEFSRTRVGDQDAAVTLRNETAQLGMLADTYASACMFVHVGKGLKRPCAVNQPRWNNGANHLLVDMSDKGRASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVAPLDREFFLTTKCTLYVSGHGSEERISLLPLQDEEHGVVVTMHCFEEHQEHLLPENAEFCQALKDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGTIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMKTLLAVPRAQLEEMQRKSLEAYGKMFGADVNDFRPSAKIILGIIRRRLG 423
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17054.1 vs. uniprot
Match: A0A6H5JGQ8_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ8_9PHAE)

HSP 1 Score: 573 bits (1476), Expect = 8.630e-198
Identity = 287/434 (66.13%), Postives = 339/434 (78.11%), Query Frame = 3 
Query:   69 MAGRLC-CSLAILLTAGAASSAVGTKHQHQQHGRL---LQTGSSESPPSLAVE--GADTWVGRPQANRCSDLDQSVFSTGMQCGPPLSPPCFQSYSTECLSNGGIYVFDGECSLQDSSELLAADQGYEVSRTSVGDQDAAWALRNETAQLGMLADTYASACMFVHVGKGLKRPCAVNQPRWNDGANHLLVDMSDKGRASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVAPLDRGFFLTTKCTLYISGHGSEERISLLPLHDKEHGVVVAMHCFEEHQEHLLPENAEFCQALRDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPRAQLEEMQRKSLEAYGRMFGADVNDFRPSAKIILGILRRRLGHRRTR 1352
            M G+LC C   +LL   AA+++ G   Q Q+HGR    L+T   ESPPS+A++  GA   VG P+ NRCSDLDQS FS GMQCGPPLSPPCFQ  STECL N GIYVFD ECSL ++SEL   D+  +VS   +      W LRNE  Q+GMLA+TY SAC+ VHV  G  +PCAV+QPRWN GANHLLVDMSDKGR SRPDVAGS+AMEAATNMHTCFYRSGYDISVPLAP+ V +DLA+V P DR FFLTTK +LY+SGHGS ER+SL+PL D+ +GV++++HCFE H+EHLLPEN E+C+AL DQY+ + Y SLMN+TFGLVPAGR P TYRLGEVMSAGSIPVFVG DLVPPF E IDW S SFAF PD+VES+M+ TL AVPRA+LE+MQRKSLEAY R+FG ++ DF   A+I+L  L+RRL HR TR
Sbjct:    1 MVGQLCRCHTLVLLLLNAAAASEGGM-QRQEHGRYSSPLET--LESPPSVALDDDGAAAGVGHPETNRCSDLDQSAFSIGMQCGPPLSPPCFQCNSTECLGNAGIYVFDSECSLLETSELRVPDEEQKVSWAWMDHHYVEWVLRNEAEQMGMLAETYESACILVHVSPGSTKPCAVDQPRWNGGANHLLVDMSDKGRDSRPDVAGSYAMEAATNMHTCFYRSGYDISVPLAPKHVFNDLADVDPWDRNFFLTTKGSLYLSGHGSGERMSLVPLQDEANGVIMSLHCFEVHEEHLLPENVEYCRALSDQYDDHSYTSLMNTTFGLVPAGRSPGTYRLGEVMSAGSIPVFVGWDLVPPFEELIDWSSFSFAFAPDQVESQMVRTLRAVPRAELEQMQRKSLEAYRRIFGVNMGDFVQGARIVLETLQRRLEHRMTR 431
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17054.1 vs. uniprot
Match: D7G4H7_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H7_ECTSI)

HSP 1 Score: 474 bits (1219), Expect = 7.210e-162
Identity = 234/243 (96.30%), Postives = 239/243 (98.35%), Query Frame = 3 
Query:  624 MSDKGRASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVAPLDRGFFLTTKCTLYISGHGSEERISLLPLHDKEHGVVVAMHCFEEHQEHLLPENAEFCQALRDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPRAQLEEMQRKSLEAYGRMFGADVNDFRPSAKIILGILRRRLGHRRTR 1352
            MSDKGRASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANV+PLDR FFLTTKCTLYISGHGSEERISLLPL D+E+GVVV MHCFEEHQEHLLPENAEFCQAL+DQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVP AQLEEMQRKSLEAYGRMFGADVNDFRPSA+IILGILRRRLGHRRTR
Sbjct:    1 MSDKGRASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVSPLDREFFLTTKCTLYISGHGSEERISLLPLQDEENGVVVTMHCFEEHQEHLLPENAEFCQALKDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPPAQLEEMQRKSLEAYGRMFGADVNDFRPSARIILGILRRRLGHRRTR 243
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17054.1 vs. uniprot
Match: D7G4H1_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H1_ECTSI)

HSP 1 Score: 441 bits (1134), Expect = 1.350e-147
Identity = 216/335 (64.48%), Postives = 264/335 (78.81%), Query Frame = 3 
Query:  348 LSNGGIYVFDGECSLQDSSELLAADQGYEVSRTSVGDQDAAWALRNETAQLGMLADTYASACMFVHVGKGLKRPCAVNQPRWNDGANHLLVDMSDKGRASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVAPLDRGFFLTTKCTLYISGHGSEERISLLPLHDKEHGVVVAMHCFEEHQEHLLPENAEFCQALRDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPRAQLEEMQRKSLEAYGRMFGADVNDFRPSAKIILGILRRRLGHRRTR 1352
            + N GIYVFD ECSL ++S+L A D+G +VS T +      W LRNE  Q+GMLA+TY SAC+ VHV  G  +PCAV+QPRW+ GANHLLVDMSD GR SRP VAGS+AMEAA+NM TCFYRSG+DISVPL  ++  ++LA+VA  DR FFLTTK +LY+S HGS ER+SL+PL D+ +GV++++HCFE H EHLLPEN E+C+AL D+Y  + Y SLMNSTFGLVPAGR P T+RLGEVMSAGSIPVFVG DLV PF E IDW S SFAF PD+V  +M+ TL AVPRA+LE+MQRKSL+A+ ++FG D   F PSA+I+L IL+RRLGHR  R
Sbjct:    1 MGNAGIYVFDSECSLLETSKLRAQDEGKKVSSTRMHHHYVEWVLRNEAEQMGMLAETYESACILVHVSPGSTKPCAVDQPRWSGGANHLLVDMSDNGRGSRPIVAGSYAMEAASNMQTCFYRSGFDISVPLHSKKAFNNLADVAAWDRNFFLTTKGSLYLSRHGSGERMSLVPLQDEANGVIMSLHCFELHNEHLLPENVEYCRALSDRYGDHSYESLMNSTFGLVPAGRSPGTFRLGEVMSAGSIPVFVGWDLVLPFKELIDWSSFSFAFAPDQVGPQMVRTLRAVPRAELEQMQRKSLKAHRKIFGVDKGIFVPSARIMLKILQRRLGHRMAR 335
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17054.1 vs. uniprot
Match: A0A6H5JRU9_9PHAE (GT47 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRU9_9PHAE)

HSP 1 Score: 350 bits (897), Expect = 3.150e-109
Identity = 180/384 (46.88%), Postives = 249/384 (64.84%), Query Frame = 3 
Query:  219 ADTWVGRP-QANRCSDLDQSVFSTGMQCGPPLSPPCFQSYSTECLSNGG------IYVFDGECSLQDSSELLAADQGYEVSRTSVGDQDAAWALRNETAQLGMLADTYASACMFVHVGKGLKR-PCAVNQPRWNDGANHLLVDMSDKGRASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVAPLDRGFFLTTKCTLYISGHGSEERISLLPLHDKEHGVVVAMHCFEEHQEHLLPENAEFCQALRDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPRAQLEEMQRKSLEAYGRMFGADVNDFRPSAKIILGILRRRLGHRR 1346
            A  W G P + +RCS +D +  +  M CG PL+ PCF        ++GG      IYVFD  CSL DSS L  +++   +S T        W  R      G+L++TY  AC+F+HV K L   PC   +P WN G NH++VD++D+ R  +P +AGS AM+A++NM +CFYRSGYD +VPL  +    +L  +AP  R +FLT K  LY+SG G +ER+S++PLH +  GV++ ++CFE H EHLLPEN EFC AL +    ++Y  LMN+TFGLVPAGR PATYRL EVMSAG+IPVFV RD+V PF E++DWP++SF+F P+EV   MM TL +V  A+L  MQRKS++A+  +FG +    R  A++++  L  R+G+ R
Sbjct:  164 APGWKGMPTRGSRCSSIDMAAVAPSMACGAPLAEPCFDHSRCRPHASGGAPSKPSIYVFDATCSLADSSALPPSNESLMLSHT--------W--REAARDAGVLSETYRDACLFLHVNKRLNHVPCPAEKPLWNGGKNHVMVDLTDRTRDKKPLIAGSAAMDASSNMRSCFYRSGYDFAVPLRHQWGFGNLTELAPWHRDYFLTVKGNLYLSGVGYDERMSVVPLHSEPEGVIMGLNCFELHDEHLLPENEEFCLALNETASRHEYEDLMNTTFGLVPAGRQPATYRLAEVMSAGAIPVFVSRDMVRPFPERVDWPTLSFSFPPEEVGPAMMDTLRSVTPAELLGMQRKSVQAFYEIFGEEPGYDR-IARVVVDELVLRVGYHR 536
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17054.1 vs. uniprot
Match: D7G4H3_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H3_ECTSI)

HSP 1 Score: 314 bits (804), Expect = 9.990e-100
Identity = 154/226 (68.14%), Postives = 186/226 (82.30%), Query Frame = 3 
Query:  675 MEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVAPLDRGFFLTTKCTLYISGHGSEERISLLPLHDKEHGVVVAMHCFEEHQEHLLPENAEFCQALRDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPRAQLEEMQRKSLEAYGRMFGADVNDFRPSAKIILGILRRRLGHRRTR 1352
            MEAA+NMHTCFYRSG+DISVPL   +  ++LA+VA  DR FFLTTK TLY+SGHGS ER+SL+PL D+ +GV++++HCFE H EHLLPEN E+C+AL D+Y  + Y SLMNSTFGLVPAGR P TYRLGEVMSAGSIPVFVG DLV PF E IDW S SFAF PD+V  +M+ TL AVPRA+LE+MQRKSL+A+G++FG D + F PSA+I+L IL+RRLGHR  R
Sbjct:    1 MEAASNMHTCFYRSGFDISVPLPSNKAFNNLADVAAWDRNFFLTTKGTLYLSGHGSGERMSLVPLQDEANGVIMSLHCFEIHDEHLLPENVEYCRALSDRYGDHSYESLMNSTFGLVPAGRSPGTYRLGEVMSAGSIPVFVGWDLVLPFKELIDWSSFSFAFAPDQVGPQMVRTLRAVPRAELEQMQRKSLKAHGKIFGVDQDIFVPSARIMLEILQRRLGHRMAR 226
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17054.1 vs. uniprot
Match: A0A6H5L9T2_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9T2_9PHAE)

HSP 1 Score: 323 bits (828), Expect = 4.070e-99
Identity = 176/391 (45.01%), Postives = 240/391 (61.38%), Query Frame = 3 
Query:  189 ESPPSLAVEGADTWVGRPQANRCSDLDQSV--FSTGMQCGPPLSPPCFQ-SYSTECLSNGGIYVFDGECSLQDSSELLAADQGYEVSRTSVGDQDAAWALRNETAQLGMLADTYASACMFVHVGK-GLKRPCAVNQPRWNDGANHLLVDMSD---KGRASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVAPLDRGFFLTTKCTLYISGHGSEERISLLPLHDKEHGVVVAMHCFEEHQEHLLPENAEFCQALRDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPRAQLEEMQRKSLEAYGRMFGADVNDFRPSAKIILGILRRRLGH 1340
            + PP L     D WV      RCS+L+ +   F+ G  CGPPL+ PCF  S      S   IYV+D ECSL DS++L   D       T++  Q      R    + G+LA+TY  AC+F+HV       PCA   P WN G NH++++ +    KG+ +RP ++ ++AM+ + +  +C+YRSGYD+S+PL P +V  D A     DR +FLT K TLY+ G+G EER ++  +HD  +GVV  + C   H +  LPEN ++CQ  R +Y+ YDY  LMN+TF LVPAGR P ++RLGEVMSAG+IPVFV RD + PF EQIDWPS SF F+PD+V   MM TL AV  AQL EMQRKSL AY ++FG  V ++   A   + +L +R+G+
Sbjct:  148 DEPPVLRHPIKDEWV-----QRCSNLENATAAFAQGSVCGPPLTKPCFDHSRCGSVSSRPMIYVYDQECSLADSNKLRINDH------TNLDKQHQGSYWREAVWRAGLLANTYEEACLFIHVNTHNHDEPCATRAPLWNGGVNHIMMEFTPWWIKGQRARPHISNTYAMDWSFDALSCYYRSGYDLSLPLVPGKVFPDTAPSPAPDRDYFLTFKGTLYLRGYGLEERSAVSRVHDPANGVVSVIKCSNMHGDESLPENQDYCQRSRKRYDLYDYEKLMNTTFALVPAGRSPGSFRLGEVMSAGAIPVFVVRDWIKPFQEQIDWPSFSFVFSPDDVGPIMMETLRAVQPAQLLEMQRKSLRAYWKIFGG-VTNYSVIASNAIDMLVQRIGY 526
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17054.1 vs. uniprot
Match: D7G4H4_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H4_ECTSI)

HSP 1 Score: 267 bits (682), Expect = 3.090e-82
Identity = 136/177 (76.84%), Postives = 147/177 (83.05%), Query Frame = 3 
Query:  711 RSGYDISVPLAPRQVLHDLANVAPLDRGFFLTTKCTL--YISGHGSEERISLLPLHDKEHGVVVAMHCFEEHQEHLLPENAEFCQALRDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPRAQLEEMQ 1235
            R+GYDISVPLAPR V HDLA VAP DR FFLTT C+L  Y+  HGSEE + L+PL DKE+GV ++MHCFE HQ+HLLPEN EF QA  D Y+G DYRSLMNSTFGLVPAG    TYRLGEVMSAGSIPVFVGRDLVP FMEQIDW SISFAFTPDEV+SR MSTLLAVPR QLE MQ
Sbjct:    6 RTGYDISVPLAPRHVFHDLAKVAPWDRRFFLTTTCSLPGYLGEHGSEEWMGLIPLQDKENGVNLSMHCFENHQDHLLPENPEFRQAQTDHYQGQDYRSLMNSTFGLVPAGWSSGTYRLGEVMSAGSIPVFVGRDLVPSFMEQIDWNSISFAFTPDEVKSRTMSTLLAVPREQLERMQ 182
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17054.1 vs. uniprot
Match: D8LQY4_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY4_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 1.760e-56
Identity = 100/179 (55.87%), Postives = 126/179 (70.39%), Query Frame = 3 
Query:  699 TCFYRSGYDISVPLAPRQVLHDLANVAPLDRGFFLTTKCTLYISGHGSEERISLLPLHDKEHGVVVAMHCFEEHQEHLLPENAEFCQALRDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPRAQLEEMQ 1235
            +C+YRSGYD+S+PL P +V  D A     DR +FLT K TLY+ G+G EER ++   HD  +GVV  + C   H + +LPEN ++CQ  R +Y+ YDY  LMN+TF LVPAGR P ++RLGEVMSAG+IPVFV RD + PF EQIDWPS SF F+PD+V   MM TL AV  A+L EMQ
Sbjct:    9 SCYYRSGYDLSLPLVPGKVFPDTAPSPAPDRDYFLTFKGTLYLRGYGLEERSAVSRAHDPANGVVSVIKCSNMHGDDILPENQDYCQRSRKRYDLYDYEKLMNTTFALVPAGRSPGSFRLGEVMSAGAIPVFVVRDWIKPFQEQIDWPSFSFVFSPDDVGPIMMETLRAVEPARLLEMQ 187
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17054.1 vs. uniprot
Match: A0A7I4DFR5_PHYPA (Exostosin domain-containing protein n=6 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4DFR5_PHYPA)

HSP 1 Score: 133 bits (335), Expect = 2.060e-29
Identity = 88/250 (35.20%), Postives = 127/250 (50.80%), Query Frame = 3 
Query:  528 ACMFVHVGKGL------KRPCAVNQPRWNDGANHLLVDMSDKGRASRPDVAGSFAMEA--ATNMHTCFYRSGYDISVPLAPRQV--LHDLANVAPLDRGFFLTTKCTLYISGHGSEERIS-LLPLHDKEHGVVVAM--HCFEEHQEHLLPENAEFCQALRDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPRAQLEEMQR 1238
            AC+F +           ++P   N P WN G NH+ V  +D+   + P   GS  M +  +T +H   YR G+DI++PL  R V  +  L+ + P +R +FLT K T Y+S  G     S    +HD +  VVV    H          P     C   +  ++ YD+  LMN+TFGL PAGR PA+YR+ EV+SAG+IPV V  + V PF   I W      F   E+  R++ TL A+ + ++E  QR
Sbjct:  234 ACLFFYFSDSKANKAAWRKPDPRNLPHWNGGLNHVFVTFADRWAQTNPPP-GSIGMASILSTELHDTTYRPGFDIAIPLPRRNVNVITGLSELKPFERKYFLTFKGTRYLSREGKFRSGSEFRGMHDGKDVVVVTTCNHGTNNKLRFWQPWRGAGCAEDQTVFDSYDFMELMNTTFGLAPAGRSPASYRMLEVLSAGAIPVLVADNYVKPFETLIKWQRCLLQFPTSEIH-RIVPTLRALSKKEVEMRQR 481
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17054.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKV6_9PHAE1.510e-29494.80GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JGQ8_9PHAE8.630e-19866.13GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G4H7_ECTSI7.210e-16296.30Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D7G4H1_ECTSI1.350e-14764.48Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
A0A6H5JRU9_9PHAE3.150e-10946.88GT47 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
D7G4H3_ECTSI9.990e-10068.14Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
A0A6H5L9T2_9PHAE4.070e-9945.01GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G4H4_ECTSI3.090e-8276.84Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D8LQY4_ECTSI1.760e-5655.87Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
A0A7I4DFR5_PHYPA2.060e-2935.20Exostosin domain-containing protein n=6 Tax=Physco... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:1569059..1575871 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1287
Model size2046
Exons4
Hectar predicted targeting categorysignal peptide
BRITEko00000,ko00001,ko00002,ko01000,ko01003,ko02000
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
CAZyGT47,GT64
COG Functional cat.S
EC2.4.1.224,2.4.1.225
EggNOG OGsKOG1021@1,KOG1021@2759
EggNOG free text desc.macromolecule glycosylation
GOsGO:0000003,GO:0000139,GO:0000271,GO:0000902,GO:0000904,GO:0001501,GO:0001503,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006029,GO:0006040,GO:0006044,GO:0006082,GO:0006790,GO:0006807,GO:0006810,GO:0006897,GO:0006928,GO:0006935,GO:0006950,GO:0006986,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007369,GO:0007399,GO:0007409,GO:0007411,GO:0007417,GO:0007420,GO:0007492,GO:0007498,GO:0008150,GO:0008152,GO:0008194,GO:0008354,GO:0008375,GO:0008589,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009605,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010646,GO:0010647,GO:0012505,GO:0015012,GO:0015014,GO:0015020,GO:0016020,GO:0016021,GO:0016043,GO:0016051,GO:0016192,GO:0016477,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0019899,GO:0019953,GO:0021537,GO:0021772,GO:0021988,GO:0022008,GO:0022412,GO:0022414,GO:0023051,GO:0023052,GO:0023056,GO:0030030,GO:0030111,GO:0030154,GO:0030166,GO:0030176,GO:0030177,GO:0030182,GO:0030201,GO:0030202,GO:0030203,GO:0030210,GO:0030900,GO:0030968,GO:0031090,GO:0031175,GO:0031224,GO:0031227,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032989,GO:0032990,GO:0033554,GO:0033692,GO:0034620,GO:0034637,GO:0034645,GO:0034976,GO:0035295,GO:0035966,GO:0035967,GO:0036465,GO:0036498,GO:0040011,GO:0042175,GO:0042221,GO:0042328,GO:0042330,GO:0042802,GO:0042803,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045880,GO:0046982,GO:0046983,GO:0048311,GO:0048312,GO:0048468,GO:0048488,GO:0048513,GO:0048518,GO:0048522,GO:0048565,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048706,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050508,GO:0050509,GO:0050789,GO:0050794,GO:0050808,GO:0050896,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051674,GO:0051704,GO:0051716,GO:0055123,GO:0060322,GO:0060465,GO:0060828,GO:0061564,GO:0065007,GO:0070887,GO:0071310,GO:0071704,GO:0071840,GO:0072498,GO:0090092,GO:0090097,GO:0090098,GO:0090100,GO:0090263,GO:0097485,GO:0098588,GO:0098657,GO:0098791,GO:0098827,GO:0099003,GO:0099504,GO:0120036,GO:0120039,GO:1901071,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903510
KEGG ModuleM00059
KEGG Pathwayko00534,ko01100,map00534,map01100
KEGG ReactionR05935,R05936,R10138,R10139
KEGG TC1.A.17.4
KEGG koko:K02366,ko:K02368,ko:K21988
Preferred nameEXTL1
Seed eggNOG ortholog2880.D7G4H7
Seed ortholog evalue2.3e-131
Seed ortholog score475.7
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.17054.1prot_E-siliculosus-1a_M_contig9.17054.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig9 1569127..1575180 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936405.217467-UTR-E-siliculosus-1a_M_contig9:1569058..15691261622936405.217467-UTR-E-siliculosus-1a_M_contig9:1569058..1569126Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig9 1569059..1569126 +
1696251063.2488725-UTR-E-siliculosus-1a_M_contig9:1569058..15691261696251063.2488725-UTR-E-siliculosus-1a_M_contig9:1569058..1569126Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig9 1569059..1569126 +
1622936405.3453324-UTR-E-siliculosus-1a_M_contig9:1575180..15758711622936405.3453324-UTR-E-siliculosus-1a_M_contig9:1575180..1575871Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig9 1575181..1575871 +
1696251063.3036876-UTR-E-siliculosus-1a_M_contig9:1575180..15758711696251063.3036876-UTR-E-siliculosus-1a_M_contig9:1575180..1575871Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig9 1575181..1575871 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936405.2789583-CDS-E-siliculosus-1a_M_contig9:1569126..15696981622936405.2789583-CDS-E-siliculosus-1a_M_contig9:1569126..1569698Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 1569127..1569698 +
1696251063.2638028-CDS-E-siliculosus-1a_M_contig9:1569126..15696981696251063.2638028-CDS-E-siliculosus-1a_M_contig9:1569126..1569698Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 1569127..1569698 +
1622936405.2918942-CDS-E-siliculosus-1a_M_contig9:1573096..15732681622936405.2918942-CDS-E-siliculosus-1a_M_contig9:1573096..1573268Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 1573097..1573268 +
1696251063.273908-CDS-E-siliculosus-1a_M_contig9:1573096..15732681696251063.273908-CDS-E-siliculosus-1a_M_contig9:1573096..1573268Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 1573097..1573268 +
1622936405.3089354-CDS-E-siliculosus-1a_M_contig9:1573905..15743281622936405.3089354-CDS-E-siliculosus-1a_M_contig9:1573905..1574328Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 1573906..1574328 +
1696251063.2836287-CDS-E-siliculosus-1a_M_contig9:1573905..15743281696251063.2836287-CDS-E-siliculosus-1a_M_contig9:1573905..1574328Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 1573906..1574328 +
1622936405.330261-CDS-E-siliculosus-1a_M_contig9:1575060..15751801622936405.330261-CDS-E-siliculosus-1a_M_contig9:1575060..1575180Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 1575061..1575180 +
1696251063.2931802-CDS-E-siliculosus-1a_M_contig9:1575060..15751801696251063.2931802-CDS-E-siliculosus-1a_M_contig9:1575060..1575180Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 1575061..1575180 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig9.17054.1

>prot_E-siliculosus-1a_M_contig9.17054.1 ID=prot_E-siliculosus-1a_M_contig9.17054.1|Name=mRNA_E-siliculosus-1a_M_contig9.17054.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=429bp
MAGRLCCSLAILLTAGAASSAVGTKHQHQQHGRLLQTGSSESPPSLAVEG
ADTWVGRPQANRCSDLDQSVFSTGMQCGPPLSPPCFQSYSTECLSNGGIY
VFDGECSLQDSSELLAADQGYEVSRTSVGDQDAAWALRNETAQLGMLADT
YASACMFVHVGKGLKRPCAVNQPRWNDGANHLLVDMSDKGRASRPDVAGS
FAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVAPLDRGFFLTTKCT
LYISGHGSEERISLLPLHDKEHGVVVAMHCFEEHQEHLLPENAEFCQALR
DQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPP
FMEQIDWPSISFAFTPDEVESRMMSTLLAVPRAQLEEMQRKSLEAYGRMF
GADVNDFRPSAKIILGILRRRLGHRRTR*
back to top

mRNA from alignment at E-siliculosus-1a_M_contig9:1569059..1575871+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig9.17054.1 ID=mRNA_E-siliculosus-1a_M_contig9.17054.1|Name=mRNA_E-siliculosus-1a_M_contig9.17054.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=6813bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:1569059..1575871+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CACGGCACAGTCAGCGAAGGCACAGCAGCAGTCAGCGAGAGCGAAACACG
GAAGGCGTCAACGAAAATATGGCGGGACGTTTGTGCTGCAGTCTCGCCAT
CCTACTCACGGCCGGCGCGGCTTCTTCCGCGGTTGGTACGAAACACCAAC
ACCAACAACATGGCCGTCTCCTGCAGACTGGCTCTTCGGAGTCTCCACCA
AGCCTTGCAGTGGAAGGCGCTGATACTTGGGTCGGTCGGCCACAGGCCAA
CCGATGTTCGGACCTAGATCAATCCGTCTTCTCCACAGGCATGCAATGTG
GGCCGCCTCTGTCACCACCTTGCTTCCAATCCTATTCTACGGAGTGTCTA
TCGAATGGTGGGATCTACGTGTTCGATGGGGAGTGTTCGCTTCAAGACAG
TAGTGAGCTGCTCGCTGCAGATCAGGGGTACGAAGTCAGCCGGACTTCGG
TGGGCGATCAAGACGCGGCATGGGCATTGCGAAACGAAACGGCGCAGCTG
GGGATGCTGGCGGACACGTACGCGTCAGCCTGCATGTTCGTGCATGTGGG
AAAAGGGCTCAAAAGGCCGTGCGCCGTAAATCAGCCCCGGTGGAATGACG
GCGCCAATCATCTGCTCGTCGACATGTCCGACAAAGGAAGGTGAGTGGGG
AAGAGGCACGTGCTGCATGCGTGACTTGTAAACGGTGAGAGAAGGACGAT
CGCAAGGTACATGCAGCATTTGTAGATTCCTGCTGTCCAGTGGTACACTT
TTTTCCCTCTGCGCCGGGGAATGACCGCGTAGCATGTGGTGATTATTTAA
CTTGTATCTCAACTGTCTTGCAAGTAGTGTTGGCACGGTATTTTATTATG
ATGATCTACAGCAGTACCAAGGGATCTATCCGTTGCCCATCAATGGAGTG
ATGAACTTTGCGCGGGAGAATGGGAAAACTCTGTCGCGGATGTCATACAT
ACATACGTATACATATGCAGGTCATTTTTCAGGGGGGCGTTCACGGAGTA
GAATCGCTCCGCGGAGCGTTTGTGTTTGTGTACGTTCCACGGAGCGGAGC
GGTTTTACTAAGAGGTTGTTTTCAATGTTTGTATAGGATTAAAGTAGCGG
AGCGGTTTGAAGCTGGCTCTTTTCCCCTACTTTAATCCTATACAAACATT
GAAAACAACCTCCCCGCCAGGGTTGGGTAGGCATTCTATTGTCATCAGTA
GAGGACACCATGAAGAGCCGTTGTGCGTGCTGGCACATTCAGGTTTGCTA
CTGGATATGGAGCGGAAATATCGAAGGTCGCAGCAGCAGCCTCTGGAAAC
AGTCCAAAATCTGGGCCGGAACCAAGCGGCATCCAACATTTGTGACAACC
ATGCTCACCGCCAAGGACCGAAAACCCCTGAACGGAGGGTGTCAGCAGTA
GCTAGGGCATCAGCTACTGCTGTACATTCTACACCCGTAGTTCAGGAGAT
TGGGGGCGGTGGCGGCGAGCATGGCTGTTACAAATGTTGGATGCCGCTTG
GTTCCTGCGCAGATTTCGGACTGTTTTCAAAGACTGCTGCGACCTTCGAT
ATTTCAGCTCCAGTGGCAAACCTGAACGTGCCAGCACGCACGACGCCTCT
TCATGATGTCCTCTACTGCTGACAATAGAATGCGTAACCTAACCCTCAAA
ACTGACCTTGTTTGAGCGCCTTCCGTTTAGGCTCTTTTCACTTGAATTTA
GAATTGTGTGAATTTTATATCTTGATTTCAACGTAGGCCTGTGGAGGTAG
ACGCGTGTAATGTATGTTTTCAGCAGCCTCTACTGCCGCCCTGTGCGAGA
ATCAGCGATTTCTGTTTTTCGCGTTGCCTACTGATCTGGTGTCTCTGTTG
TGCAATTTTGGTGCTCTTGCGTTTGTTTTCAAAATTTGTCAGCATCAAAA
TTAGTCTTCTGCACCCCCTTAAAAATCACGGTCATGTTGAACAAATATAT
ATATACCTATCACGGAGCGGTGCGGAGCGGTTTGTTCGAGGGCAAAGGTT
TATACAATGCACATAATCCCGTAAGGGTGCCCACAACCATACCCCCGACG
AACGAACCAACTACCCAACGCCTTCCTTCTACACCTAGCACAACATATAG
ATCGATGCACAAGACGGCTACCATTCTTGTTGACCCAGTTGCCCACGGGA
GAGATATCACCGTGTGCTGCTCGGGAAGTCGTCGAAAAAAAGAACTTTCG
CTGACGCGATGAATTCATTGCTAATCTACCTATGCATACCATGCATACCT
TAAAGACTCTTTTTCTTAGATTGAATTGGATTCGTTGGGTCATACTGAGA
AAATGAACTTAAAGAAGTCTCGCGGAGCGGAGCGGGTGTTTTTTCATGTC
ACGGAGCGGGGCGGTTTTATCCGTACTACGGTTTTTCACGGGGCGGTGTT
GTTTTCTCCGTAGCATAAACCGCGCGAAACCGCGGCCTTGAGGACGGTGC
ACCGTCAGAAAAAAACGTCCAAACCGCACGGATATCGGTACAATTCGACG
GAGTGCCTGCAAGTTCGTCGAAACCGTTGGGTTGGTGCACCGAAAAAAAT
TGATTGATCTGCAAGGTGTGCGGTGCTTGAAAGCCGCTGGTGACACCGTA
CGTACGCGTCCTCGCCGCCAGGATAGCCCAAACAGGCCAAAAAGCTGTCA
ATTAATCAATTACTCGATTACGCATGATGGAATCGTTCCCCACATTGATA
CCTCATCGACTCATACGTTCGTGCAACACGTACAACAGCAGATGATTCCT
CACTTGCATCTCGTTGAAATAAGCAGGTACTGATACCTTCGTAGCACCAA
TTGCCCACATCGATATCTCCTCGACTAGTACGTTCCTGCAACACGTACAA
CAACAGCAGATATTGCTCATTTGCCTCTGATTAACAACTATGTAGCACTT
TGGTAACACCAGGCGTCTCATGTATCACCAAATACGCCCCTATTGCACTC
AGTCGGATTCGACCTCGACAACCACTTGCTCTCCCGCACGAACGAGCGGC
TTGGCAGGTAGCTGCAGCCTTAGCCTTCCCAACAGACTGCGCTGCAGCAG
CTTCCCCAACTCATTGTCCAGCTTCTTAATCTCGGGAATAAGATGGGGCT
AGCAGAAACACCAGCACCAGCACCAGCACGACGAGGAGAGCGATCGCCAG
GAGGGTGGTCGCCAGGGTCGGGTGTCGACCCCATCAGAGATGGGCAGACG
TGCACACGGACTAATGTGCACGGAGTGTGTGTGTGGCAACTGCGCGTGTG
GCGCGGTGTGCTGCGGTTTTACCCGCGGTTGTGTGACGGAGTAGCTCAAA
CCGCTCCGTGAAAAAAACGCTTGTACGAATTTTTGGGAATCCGAACGGAG
CGGAGCGGTTTATCCGAGGGCAAAAACCTCACGGAGCGGAGCAAAAACCT
CACGGAGCGGAGCAGTTTTTTTGTTGATGTCACGGAACGGAGCGGTATTG
CCCCAAGGGAAAACCTCACGGAGCGGTAACGAACCGCTCCGCTCCGTGGA
AAAAAAACGCCCAGTGAACAACCCTGTCATTTTTGATACAATACATGTGA
CGTGGAATCTTGTGTCTCCGAGTTTGTCCAGGGTTTCTTTTTGATATGCA
CAGCACCCCAATATGTTTCGCTTAGTTAACGTTCAAGGGCGTCACATGCC
TGCACTTTGATGCTAAAAAAAATCAAGGATGGCTGAATCTCTCGGAGATA
AATGCGTACCTCCTATCTCATCCTAGTCTCGGCCACCTTAGCAGATCACG
GTGTGCAGCGAGCGTCTCTGCATGGCAATGTGGACCTCCCGCGAAAATTA
GTATTCATCCGGTTTGTCACTCTTTGACGTTTGCCCCCAGCAAACTTTCG
ATATTTTCTTCCACCCCCGGTCCGTCCAAACTCAAGCTGAAACGGCGGAC
TCTCTAAAATCTCAAGTTCGACAGATTCGAAAGGTAGACATTTCGCAACT
CCATGACGCTATGCTAAATTAGCCCTTCCTGCATGTGTGCTCTTCATTCG
CGCGACGCTTTCACTCTTGTCGCCAAACCTCAATTCAGGGCTTCGCGACC
CGATGTGGCTGGTAGTTTTGCCATGGAGGCGGCCACCAACATGCACACGT
GTTTCTACAGGAGTGGCTACGACATTTCAGTGCCTCTTGCTCCCAGACAA
GTGCTCCACGATCTGGCCAACGTTGCTCCTCTGGATCGGGGTTTCTTCTT
AACAACAAAGGTAGGCGCTGTTTGTGTTGTGTAGTTCGAGCCGCTGTTGT
TTCTTCTTGCCACTGCTGCTGCAGGTGTTGTTGTCTGTGAACCGAAAGGC
GATGTGACCATCTCAACACCTTCAGCACTCCCGTTTTTGCATTTGTTGCA
CACGTCGCCTGCGTGTTTTCTTCGGGGATTTTCCAGCGTCGTGCGTGTGG
GCATCAACAGTCCGTTCCGCCCAAAGCATTGCTTGGTACAGGCTTATTGC
GTAATATACTTCCAGTCGGTGGGTCGGTCGCATACATACACGATTGCACG
TCTGATTCGGATAGACTAACTCCATCACACGACCATAACATTTCATTGCT
AACCCTAACAATGCCCGTTTCACCTAATGTACCACATGATATGCATACGC
GAGTTACGGAATTCGGCGAACCTACACGTGCCCAGGCAGATATGTTTCGG
CTCACACCCTGACCTGTGAAGACCAACCACAATATCATCAAGTCAGCGCT
GTTGCTATTCGTGACCGCAGCACGGAAACATTGAGGTTTGATGCCAGCAA
TGCTGGTCGTACCTGCAACAGTTATATATGATGTCTCTCAACTCATTTGC
GACGCCCGTTCACCACGTCCGTACTTTGTGATTGCGCCATATACCAGTGC
ACGTTATATATTAGCGGCCACGGTTCGGAGGAAAGGATCAGTCTTTTACC
GCTGCACGACAAAGAACACGGCGTGGTGGTAGCCATGCACTGCTTCGAGG
AACACCAAGAGCACCTACTTCCAGAGAATGCCGAGTTCTGTCAAGCGCTG
AGAGACCAGTATGAAGGCTACGACTACCGAAGCCTGATGAACTCAACGTT
CGGGCTGGTACCAGCTGGGCGGGGTCCCGCCACGTACCGCCTCGGGGAAG
TGATGAGCGCCGGGTCGATCCCCGTATTCGTTGGCCGGGACCTAGTTCCT
CCGTTCATGGAACAAATCGACTGGCCTTCGATTTCTTTCGCGTTTACGCC
GGACGAAGTGGAGTCGCGCATGATGAGCACGTTGCTGGCGGTTCCACGAG
CGCAGCTAGAGGAAATGCAGGTATGTAGTGAACAACATGGCTCGAATGAG
ATGGGCAGGGATTAGTAGCCCCCGGCGTTCCCCGCCGTAATGAGTGCGGA
GAGGGTGGTGTTTCGAAGCCACTGGGCCATTCGCTGAATGTGGTGCATCG
TTCCTTTCACATGCGCCCCTTTCGGCAGAAACAAAGATCGCGGTGCCCAC
ACCACGCCGTATGTACTGACCAGGCCTGGCGGGTGTGTACTGAGCTTGCC
GAATGAAAGTTCGCTTCTTCGGGGAGAATTCCATTGACCCACTAGCGAAG
TTATTGCATATTCTGCCGTCCCCATACCCCCCTTATCATCTGAGCCACGC
CCTTGAATACTCCCACGGCCATGACAAACGATGCGTATCGTTCCCGGGTT
CCCAAGAGGAGAGAGAGAGGGGGGGTGAAAGGAAGTAGATTTGAAATACC
TGGCGTTGACTGTGCAGGGCGAGTCCTAGCACAAGGTACTAGCACCATAT
TTCAAGCGTACCCCTCCGTTGTCGCTAAGTGGACTGTTCAATCGAAATTT
TATTGTAATGAACGGAGCTTTGGCTACACTCACATCAGCTGGCTAAACCG
GGCCAGCACAGTATGCGATCCTTTTCTCTACATGTCGGAGCTACATCCCT
CATACTGCCAATCCTCGACAAGAGGTTCGAACATGTACCGTCTCGCACCG
TCCGTTTTCGTTTCATATGCCATGTGACATCGACAACGGAATTGTCACAT
AGCGCAAGTCGCTCGAGGCCTATGGGAGGATGTTCGGGGCGGACGTGAAC
GACTTCCGCCCAAGCGCTAAAATCATACTTGGTATTCTTCGCAGGCGGCT
AGGACACCGGCGGACGCGATGAGCGTTCATGCCCGGCAAAAACATTGTGC
AGGGTTCGTGATTTGTTAAATGAGGCGTCGTCGGGGTTGTTGAAAATCTT
TTTGGTCCGTTTGGTGGGAAGGAAAAGTGGTAGGTCGGTTACTTGTAGCA
CTTCAGTATGGGAGAGTGAGGGGTCTATTCGGCGTCTTCTCTGTAGTACG
CGGGGTTAGTTGCTGTTTTTGCGTGAACTTGTGTGATGAAATCGCTGCGT
GTGCTGTATAGGGAAGGTGGGGGGGTGCTCTGCCAAAGGGTGACACTGTT
GGGCTATACTCAGGAGATTTGTTGATAGCACAGTTCTTGATTTTGTTTGT
TGTTTTGAGCTATCTCCATCTTCAAATTTTGTTTTATGTTGTATTTTTTG
GTACCCCGAGGCATACATGGGCCTGATGGCTGGCGGTGGTCTCGATTCCA
CCTGTCATATTTTGGTATATTTCCTGATGCAGCTGTCCGTTTATTCACCC
GTACTTGTGGAACCATGGTAGCTGGAAACAGCCTGGTAGTTAGGGTTTCG
TTGGGCGCTTACTTTGTCTTGCGGGCGTGCTGTCATAGGGTTAGGATTAT
TGACCTTTACCATGAGTTCTCGACACAATAATACGGGGGAGGGGGCTATT
TTTGAGGACATTGATGACACAGGTGCCATCCGTGAAGTTTTGAACTCGGC
AACTCTTGATTAC
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig9:1569059..1575871+

>mRNA_E-siliculosus-1a_M_contig9.17054.1 ID=mRNA_E-siliculosus-1a_M_contig9.17054.1|Name=mRNA_E-siliculosus-1a_M_contig9.17054.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2574bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:1569059..1575871+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGCGGGACGTTTGTGCTGCAGTCTCGCCATCCTACTCACGGCCGGCGC
GGCTTCTTCCGCGGTTGGTACGAAACACCAACACCAACAACATGGCCGTC
TCCTGCAGACTGGCTCTTCGGAGTCTCCACCAAGCCTTGCAGTGGAAGGC
GCTGATACTTGGGTCGGTCGGCCACAGGCCAACCGATGTTCGGACCTAGA
TCAATCCGTCTTCTCCACAGGCATGCAATGTGGGCCGCCTCTGTCACCAC
CTTGCTTCCAATCCTATTCTACGGAGTGTCTATCGAATGGTGGGATCTAC
GTGTTCGATGGGGAGTGTTCGCTTCAAGACAGTAGTGAGCTGCTCGCTGC
AGATCAGGGGTACGAAGTCAGCCGGACTTCGGTGGGCGATCAAGACGCGG
CATGGGCATTGCGAAACGAAACGGCGCAGCTGGGGATGCTGGCGGACACG
TACGCGTCAGCCTGCATGTTCGTGCATGTGGGAAAAGGGCTCAAAAGGCC
GTGCGCCGTAAATCAGCCCCGGTGGAATGACGGCGCCAATCATCTGCTCG
TCGACATGTCCGACAAAGGAAGATGGCGGGACGTTTGTGCTGCAGTCTCG
CCATCCTACTCACGGCCGGCGCGGCTTCTTCCGCGGTTGGTACGAAACAC
CAACACCAACAACATGGCCGTCTCCTGCAGACTGGCTCTTCGGAGTCTCC
ACCAAGCCTTGCAGTGGAAGGCGCTGATACTTGGGTCGGTCGGCCACAGG
CCAACCGATGTTCGGACCTAGATCAATCCGTCTTCTCCACAGGCATGCAA
TGTGGGCCGCCTCTGTCACCACCTTGCTTCCAATCCTATTCTACGGAGTG
TCTATCGAATGGTGGGATCTACGTGTTCGATGGGGAGTGTTCGCTTCAAG
ACAGTAGTGAGCTGCTCGCTGCAGATCAGGGGTACGAAGTCAGCCGGACT
TCGGTGGGCGATCAAGACGCGGCATGGGCATTGCGAAACGAAACGGCGCA
GCTGGGGATGCTGGCGGACACGTACGCGTCAGCCTGCATGTTCGTGCATG
TGGGAAAAGGGCTCAAAAGGCCGTGCGCCGTAAATCAGCCCCGGTGGAAT
GACGGCGCCAATCATCTGCTCGTCGACATGTCCGACAAAGGAAGGGCTTC
GCGACCCGATGTGGCTGGTAGTTTTGCCATGGAGGCGGCCACCAACATGC
ACACGTGTTTCTACAGGAGTGGCTACGACATTTCAGTGCCTCTTGCTCCC
AGACAAGTGCTCCACGATCTGGCCAACGTTGCTCCTCTGGATCGGGGTTT
CTTCTTAACAACAAAGGGCTTCGCGACCCGATGTGGCTGGTAGTTTTGCC
ATGGAGGCGGCCACCAACATGCACACGTGTTTCTACAGGAGTGGCTACGA
CATTTCAGTGCCTCTTGCTCCCAGACAAGTGCTCCACGATCTGGCCAACG
TTGCTCCTCTGGATCGGGGTTTCTTCTTAACAACAAAGTGCACGTTATAT
ATTAGCGGCCACGGTTCGGAGGAAAGGATCAGTCTTTTACCGCTGCACGA
CAAAGAACACGGCGTGGTGGTAGCCATGCACTGCTTCGAGGAACACCAAG
AGCACCTACTTCCAGAGAATGCCGAGTTCTGTCAAGCGCTGAGAGACCAG
TATGAAGGCTACGACTACCGAAGCCTGATGAACTCAACGTTCGGGCTGGT
ACCAGCTGGGCGGGGTCCCGCCACGTACCGCCTCGGGGAAGTGATGAGCG
CCGGGTCGATCCCCGTATTCGTTGGCCGGGACCTAGTTCCTCCGTTCATG
GAACAAATCGACTGGCCTTCGATTTCTTTCGCGTTTACGCCGGACGAAGT
GGAGTCGCGCATGATGAGCACGTTGCTGGCGGTTCCACGAGCGCAGCTAG
AGGAAATGCAGTGCACGTTATATATTAGCGGCCACGGTTCGGAGGAAAGG
ATCAGTCTTTTACCGCTGCACGACAAAGAACACGGCGTGGTGGTAGCCAT
GCACTGCTTCGAGGAACACCAAGAGCACCTACTTCCAGAGAATGCCGAGT
TCTGTCAAGCGCTGAGAGACCAGTATGAAGGCTACGACTACCGAAGCCTG
ATGAACTCAACGTTCGGGCTGGTACCAGCTGGGCGGGGTCCCGCCACGTA
CCGCCTCGGGGAAGTGATGAGCGCCGGGTCGATCCCCGTATTCGTTGGCC
GGGACCTAGTTCCTCCGTTCATGGAACAAATCGACTGGCCTTCGATTTCT
TTCGCGTTTACGCCGGACGAAGTGGAGTCGCGCATGATGAGCACGTTGCT
GGCGGTTCCACGAGCGCAGCTAGAGGAAATGCAGCGCAAGTCGCTCGAGG
CCTATGGGAGGATGTTCGGGGCGGACGTGAACGACTTCCGCCCAAGCGCT
AAAATCATACTTGGTATTCTTCGCAGGCGGCTAGGACACCGGCGGACGCG
ATGACGCAAGTCGCTCGAGGCCTATGGGAGGATGTTCGGGGCGGACGTGA
ACGACTTCCGCCCAAGCGCTAAAATCATACTTGGTATTCTTCGCAGGCGG
CTAGGACACCGGCGGACGCGATGA
back to top