mRNA_E-siliculosus-1a_M_contig9.17049.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.17049.1 vs. uniprot
Match: A0A6H5K9L7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9L7_9PHAE) HSP 1 Score: 257 bits (656), Expect = 4.580e-74 Identity = 135/258 (52.33%), Postives = 172/258 (66.67%), Query Frame = 3
Query: 1059 YTLTISTCDI---SYSGSADTVEFFTCSGGTYCDIDTETDDPKVSAEFGSTGESQTFTINVDVAPTTLVVSKPSGTDGWCLDEVVWEGGSNLLANSSVVYFDLSDGDSLNCQGGIKGDSGD---------VGPCLTEWRFFNLQGDAEYEYELKVRACAGESSPQVNASFCPDVACSTTDVQQVELTEFSAGLTTFPVQLDFNPVAMQFAAL-DDGWCAEAMSLNGFDLAETYPYELDAGESRIVSNVQYYGEAATPA 1793
+ LTI+TCD S +GSADT+ F+TCSGG YC + D P+ A FG GE + DV PTTLV+SKP G DGWC++ + W+G ++LA ++V+YFD+SDG++ NC GG+ + + V PCL EWR FNLQGDA+YEYELKV+ C G + V S+CPD +CST DV LT F +G+TTFPVQLDFNP AMQF A D WCA+A+S N FDLAE Y Y L+ G+S V+N+Q G A TPA
Sbjct: 11 FVLTITTCDFNGSSATGSADTINFYTCSGGPYCAM---ADSPETEAVFGH-GEIRDLVFLDDVEPTTLVISKPVGNDGWCVNGIQWQG-VDMLAPTTVLYFDISDGNTGNCVGGLLDYTDEDNEYFEENLVYPCLEEWRIFNLQGDADYEYELKVQGCDGVDTTPVTVSYCPDKSCSTADVVTQTLTAFGSGMTTFPVQLDFNPAAMQFLASGSDVWCADALSFNQFDLAENYSYSLEPGKSSTVTNLQVNGIAPTPA 263
BLAST of mRNA_E-siliculosus-1a_M_contig9.17049.1 vs. uniprot
Match: A0A6H5K9C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9C0_9PHAE) HSP 1 Score: 243 bits (619), Expect = 2.060e-69 Identity = 127/248 (51.21%), Postives = 162/248 (65.32%), Query Frame = 3
Query: 1059 YTLTISTCDI---SYSGSADTVEFFTCSGGTYCDIDTETDDPKVSAEFGSTGESQTFTINVDVAPTTLVVSKPSGTDGWCLDEVVWEGGSNLLANSSVVYFDLSDGDSLNCQGGIKGDSGD---------VGPCLTEWRFFNLQGDAEYEYELKVRACAGESSPQVNASFCPDVACSTTDVQQVELTEFSAGLTTFPVQLDFNPVAMQFAAL-DDGWCAEAMSLNGFDLAETYPYELDAGESRIVSNV 1763
+ LTI+TCD S +GS DT+ F+TCSGG YC + D P+ A FG GE + DV PTTLV+SKP G DGWC++ + W+G ++LA ++V+ FD+SDG++ NC GG+ + + V PCL EWR FNLQGDA+YEYELKV+ C G + V SFCPD +CST DV LT F +G+TTFPVQLDFNP AMQ A D WCA+A+ N FDLAE YPY L+ ES V+N+
Sbjct: 19 FVLTITTCDFNGSSVTGSVDTINFYTCSGGPYCAM---ADSPETEAVFGD-GEIRDLVFLDDVEPTTLVISKPVGDDGWCVNGIQWQG-VDMLAPTTVLIFDISDGNTGNCVGGLLDYTDEDNEYLEENLVYPCLEEWRIFNLQGDADYEYELKVQGCDGVDTTPVTVSFCPDTSCSTADVVTQTLTAFGSGMTTFPVQLDFNPAAMQLLASGSDVWCADALLFNQFDLAENYPYSLEPEESSTVTNL 261
BLAST of mRNA_E-siliculosus-1a_M_contig9.17049.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI) HSP 1 Score: 181 bits (460), Expect = 2.170e-45 Identity = 96/222 (43.24%), Postives = 135/222 (60.81%), Query Frame = 3
Query: 468 LTSCTYDDTSMGNGLCSSVTNTEECGYDGGDCCECTCQAVDDDDYKCGPTYQCLDPTASCYGDEGS--NPYPSCEHIVLVGNGYCDLDSNIEECGYDGGDCCECTCE--------DEWAICGPNYACIDPDASCFGDEGSNPFPL--CDQSVGLLGDGYCRLDANKEDCGYDGGDCCECTCVTA---EWTCGVD-SDYICQDPDAECFVEDEVYTLTISTCD 1085
+ +C++ T +G+G CS NT EC YDGGDCC CTC++ DDD+ C + C+DP A+C D+ + + +CE+ V +GNG+CD +NIE CGYDGGDCCECTCE D+W +ACIDP A C D+ + C G+ G+G+C + NKE+CGYDGGDCC CTC + +++C + + C+DP+A CF E+ + ST D
Sbjct: 122 IENCSWS-TGIGDGYCSENLNTPECAYDGGDCCSCTCESPYDDDWGC-MWFACIDPEAACVDDDDITVDMFENCEYPVDIGNGWCDEANNIEACGYDGGDCCECTCEYESPYDWDDDWDYHCMEFACIDPSAPCVDDDDITVDMVENCGYVSGI-GNGWCDRNNNKEECGYDGGDCCSCTCESPYDDDYSCSSEYGSFDCKDPNASCFGEEPTGSDDFSTDD 340
BLAST of mRNA_E-siliculosus-1a_M_contig9.17049.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI) HSP 1 Score: 179 bits (453), Expect = 1.110e-44 Identity = 113/271 (41.70%), Postives = 140/271 (51.66%), Query Frame = 3
Query: 465 SLTSCTYDDTSMGNGLCSSVTNTEECGYDGGDCCECTCQAVDDDDY-----KCGPTYQCLDPTASCYGDEGSNPYPSCE-HIVLVGNGYCDLDSNIEECGYDGGDCCECTCE----DEW-----AICGPNYACIDPDASCFGDEGS--NPFPLCDQSVGLLGDGYCRLDANKEDCGYDGGDCCECTCVTAEWTCGVDSDYICQDPDAECFVEDEVYTLTISTCDI------SYSGSADTVEFFTCSGGTYCDIDTET---DDPKVSAEFGS 1199
SL+S D G+G C+ N ECGYDGGDCCECTCQ D+ K G + C+DP A CY ++G S E +G+G+CD +N E CGYDGGDCCECTCE D+W CG +ACIDP A C D+ + CD +VG+ GDGYC +D N C YDGGDCCECTC CG S + C DP A C +D V I CD + + E GG C+ E+ DD S+E G+
Sbjct: 25 SLSSSGCWDALYGDGYCTPPNNNAECGYDGGDCCECTCQNPQGGDHHWICSKNGSGFACVDPDAPCYAEDGVTVEASQECDFWDLGDGWCDQVNNNELCGYDGGDCCECTCEVPTDDDWDNDLYVACGEGFACIDPSAPCVNDDDITVDVDESCD-AVGM-GDGYCDMDNNNAACAYDGGDCCECTCEPNN-KCGGRSGFACIDPGAPCVDDDSVTVDMIDNCDYLRVMGNGWCDEENNNELCAYDGGDCCECTCESAWNDDYTCSSEHGT 292
BLAST of mRNA_E-siliculosus-1a_M_contig9.17049.1 vs. uniprot
Match: D7G0S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI) HSP 1 Score: 167 bits (423), Expect = 1.730e-42 Identity = 87/174 (50.00%), Postives = 107/174 (61.49%), Query Frame = 3
Query: 495 SMGNGLCSSVTNTEECGYDGGDCCECTCQAVDDDDYK-------CGPTYQCLDPTASCYGDEGS--NPYPSCEHIVLVGNGYCDLDSNIEECGYDGGDCCECTCEDEW-AICG--PNYACIDPDASCFGDEGSNPFPLCDQSV--GLLGDGYCRLDANKEDCGYDGGDCCECTC 974
S+GNG C N E CGYDGGDCCECTCQ +D DD CG + C+DP A C D+ + +C+ + VGNG+CD+D+N E C YDGGDCCECTCED+ CG +ACIDP+A C DE S + + G G+G+C D N E+C YDGGDCCECTC
Sbjct: 129 SVGNGWCDEENNNEGCGYDGGDCCECTCQPLDTDDGTDDYFQNGCGNGFACIDPNAPCVNDDDITLDIVENCDSVA-VGNGFCDMDNNNEACAYDGGDCCECTCEDQPNQECGRWSGFACIDPEAPCV-DEDSFTVDMVESCKYPGSFGNGWCDEDNNIEECAYDGGDCCECTC 300
BLAST of mRNA_E-siliculosus-1a_M_contig9.17049.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE) HSP 1 Score: 176 bits (446), Expect = 3.000e-42 Identity = 91/208 (43.75%), Postives = 117/208 (56.25%), Query Frame = 3
Query: 498 MGNGLCSSVTNTEECGYDGGDCCECTCQAVDDDDYKCGPTYQCLDPTASCYGDEGS--NPYPSCEHIVLVGNGYCDLDSNIEECGYDGGDCCECTCE----DEWAICGPNYACIDPDASCFGDEGS--NPFPLCDQSVGLLGDGYCRLDANKEDCGYDGGDCCECTCVTAEWTCGVDSDYICQ-----DPDAECFVEDEVYTLTISTC 1082
+GNG C N E C YDGGDCCECTC++++DDD+ C + C+DP A C D+ + +C V +G+GYC D N EC YDGGDCC CTC+ D+W +ACIDP+A+C D+ + F C+ V + GDG+C N E CGYDGGDCCECTC D DY C DP A C +D+V + C
Sbjct: 288 IGNGWCDVDNNNELCAYDGGDCCECTCESLEDDDWACRNNFACVDPNAPCVDDDSVTIDMLENCPWAVGIGDGYCSEDLNTPECAYDGGDCCACTCQNDVDDDWXX--XXFACIDPEAACVNDDDITVDMFVNCEYPVNV-GDGWCDQGNNNEACGYDGGDCCECTCENER-----DEDYRCMEFSCIDPSAPCVNDDDVTIDMVENC 487
BLAST of mRNA_E-siliculosus-1a_M_contig9.17049.1 vs. uniprot
Match: A0A6H5JRD2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRD2_9PHAE) HSP 1 Score: 167 bits (422), Expect = 1.230e-41 Identity = 106/327 (32.42%), Postives = 166/327 (50.76%), Query Frame = 3
Query: 1059 YTLTISTCDISYSGSADT-VEFFTCSGGTYCDIDTETDDPKVSAEFGSTGESQTFTINV--DVAPTTLVVSK-----PSGTDGWCLDEVVWEGGSNLLANSSVVYFDLSDGDSLNCQGGIKGDSGDVGP-----CLTEWRFFNLQGDAEYEYELKVRACAGESSPQVNASFCPDVACSTTDV-----QQVELTEFSAGLTTFPVQLDFNPVAMQFAALD--DGWCAEAMSLNGFDLAETYPYELDAGESRIVSNVQYYGEAATPAETPAPIPAVV---EEGDXXXXXXXXXXVWFEALWEIVVTIVGGIVLACIMGGAGIFYKRWRQ 1970
Y+L ++ C+ +YSG+ D ++F C GG+YC + DD V + S + T I + PTT+ K G D WC+D V WE G NLL + + + +++ C GI +G V P C+ +WRFFN+ G +EY+Y+++V+ACAG S V A FC + C + +++E+ + G T L FNP+A++ A D D WCA+ + NG+ L T +++ +I N+Q G+ TPA T + A EE D W +A WE+ VT++G +V+A GAG F + +R+
Sbjct: 20 YSLKVTACNSTYSGTPDDDIKFHFCDGGSYCILGDAEDDDWVGLQGNSISDRSTIEIAIAPGYEPTTIEFRKGFGVEDPGQDSWCIDRVTWEDGDNLLGEDGYFFLEHQN-EAMGCINGIADTTGWVDPTEKVACMKKWRFFNINGQSEYKYDVRVKACAGTSLSIVLAYFCSNSNCDRGAIGEEWPERLEMNDVEGGWTDVSFYLPFNPLAVRLEAADGDDAWCADELFFNGYSLI-TNMTKVETEGFQIFPNIQENGQ--TPAPTXXXVDASASTKEESDDPK--------WLDAAWEVTVTVIGAVVVAA---GAGCFARAYRR 331
BLAST of mRNA_E-siliculosus-1a_M_contig9.17049.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE) HSP 1 Score: 171 bits (433), Expect = 4.280e-41 Identity = 94/220 (42.73%), Postives = 122/220 (55.45%), Query Frame = 3
Query: 486 DDTSMGNGLCSSVTNTEECGYDGGDCCECTCQAVDD----DDYKCGPT--YQCLDPTASCYGDEGSNPY------PSCE-HIVLVGNGYCDLDSNIEECGYDGGDCCECTCEDEWAICG-PNYACIDPDASCFGDEGSNPFPLCDQSVGLLGDGYCRLDANKEDCGYDGGDCCECTCVTAEWTCGVDSD-------YICQDPDAECFVEDEVYTLTISTC 1082
D ++G+G C NTEEC YDGGDCC CTCQ DD D CG + + C+DP A C D+ + +C +IV + +G CD +N EECGYDGGDCC CTC D++ CG +ACIDP A C D+ + + V +GDG C LD N+E+C YDGGDCC CTC + G D + C DPDA C +D++ + TC
Sbjct: 100 DPWAIGDGNCDKDNNTEECDYDGGDCCSCTCQVPDDGTGDDGSLCGESAVFACIDPDAPCVNDDDFTAFLPEVVKETCGGNIVHLADGDCDQINNNEECGYDGGDCCFCTCLDDFYECGIRGFACIDPSAECADDDDVTVDTVENCGVRSIGDGQCDLDNNREECHYDGGDCCSCTCQVPDDDSGDDGSLCSESTVFACIDPDAPCVNDDDITVDMMDTC 319
BLAST of mRNA_E-siliculosus-1a_M_contig9.17049.1 vs. uniprot
Match: A0A6H5KJK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK5_9PHAE) HSP 1 Score: 166 bits (420), Expect = 8.400e-39 Identity = 94/217 (43.32%), Postives = 125/217 (57.60%), Query Frame = 3
Query: 495 SMGNGLCSSVTNTEECGYDGGDCCECTCQAVDDDDYKCG-PTYQCLDPTASCYGDEG--SNPYPSCE----HIVLVGNGYCDLDSNIEECGYDGGDCCECTC----EDEWAICGPNYACIDPDASCFGDEGSNP-FPLCDQSVGLLGDGYCRLDANKEDCGYDGGDCCECTCV---TAEWTCGVDSDYICQDPDAECFVEDEVYTLTISTCDISYSG 1100
S+G+G CS N E C YDGGDCCECTC D Y CG + C+DP+A+C D+ ++ SC ++ +GNGYC+ +NIEEC YD GDCC+CTC +D ++AC+DP+A C D+ + F C GDG+C N E CGYDGGDCCECTCV +AE+ C +++ C DP A C +D+V + C I Y G
Sbjct: 73 SIGDGFCSDENNNEVCDYDGGDCCECTCV---DAFYPCGYVAFACIDPSAACVDDDNITADIAESCHDGGGYVAGLGNGYCNEANNIEECDYDAGDCCQCTCGIESDDLSDFSCVDFACVDPNAPCVDDDVTEGMFEDCFN----FGDGFCNDYNNNEQCGYDGGDCCECTCVVDWSAEFGC---TEFACIDPTAPCVDDDDVTADALENCMIEYLG 279
BLAST of mRNA_E-siliculosus-1a_M_contig9.17049.1 vs. uniprot
Match: D8LEP6_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP6_ECTSI) HSP 1 Score: 158 bits (400), Expect = 1.510e-38 Identity = 97/232 (41.81%), Postives = 124/232 (53.45%), Query Frame = 3
Query: 483 YDDTSMGNGLCSSVTNTEECGYDGGDCCECTCQAVDDDDYKCGPTYQ--------CLDPTASCYGDEGSNPYPSCEHIVL-----VGNGYCDLDSNIEECGYDGGDCCECTCEDE----WAICGP-NYACIDPDASCFGDEGSNP--FPLCDQSVGLLGDGYCRLDANKEDCGYDGGDCCECTCV--TAEWTCGVDSDYICQ-----------DPDAECFVEDEV-YTLTIS 1076
YD + +GNG C S+ N E+C YDGGDCCECTC Y G Q C+DP A C D+ + E + L +GNGYCD +N EC YDGGDCCECTCE C P ++ACIDP+A C D+ + + C V +GDG C + NKE+CG+DGGDCC+CTCV ++ W SDY CQ D A C+ E+ + Y L+ S
Sbjct: 161 YDPSRIGNGACDSLLNNEDCAYDGGDCCECTCDPSRYPWYDSGVGCQTGMYGGFACIDPDAPCVDDD----IVTAEMMDLCSTGQIGNGYCDDSNNSPECAYDGGDCCECTCESHDDGYEYYCEPGSFACIDPEAECVDDDDNTAEQYEHCGW-VTRIGDGMCDDENNKEECGFDGGDCCDCTCVVPSSAW-----SDYACQEVYNINSFDCLDTSASCYGEEHLSYELSFS 382 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17049.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig9.17049.1 >prot_E-siliculosus-1a_M_contig9.17049.1 ID=prot_E-siliculosus-1a_M_contig9.17049.1|Name=mRNA_E-siliculosus-1a_M_contig9.17049.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=607bp MTPVFARRPSTPRCSSLTKLLPTTAAAAMLLFGKTSTATSSSTTAISSGSback to top mRNA from alignment at E-siliculosus-1a_M_contig9:1489203..1505952- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig9.17049.1 ID=mRNA_E-siliculosus-1a_M_contig9.17049.1|Name=mRNA_E-siliculosus-1a_M_contig9.17049.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=16750bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:1489203..1505952- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig9:1489203..1505952- >mRNA_E-siliculosus-1a_M_contig9.17049.1 ID=mRNA_E-siliculosus-1a_M_contig9.17049.1|Name=mRNA_E-siliculosus-1a_M_contig9.17049.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=3642bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:1489203..1505952- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |