mRNA_E-siliculosus-1a_M_contig9.17045.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.17045.1 vs. uniprot
Match: A0A6H5JPU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU5_9PHAE) HSP 1 Score: 413 bits (1062), Expect = 3.690e-140 Identity = 210/241 (87.14%), Postives = 220/241 (91.29%), Query Frame = 1
Query: 1 QTRPIVSRGTVAYGSPKASIPPPCAPSIRKATAWYGARDHEDEFSMHHDASHSDESGGYGSHVTSSRRAFLNHVAGAAXXXXXXXXXXTPPSFGATARGVEEVKKGIEGDFLSRRYYVTGDLTPSLYRPDCLFTDPTTRVESVERYTAAVKLLFDPDNAQVDLLSLVVKDNTHIFAEWRLQGYLKFPWHPYVKPYTGTTLYTLDSDGLISRHEETWSISALEAARATITPTAGPQAAMASS 723
QTRPIVSR T+A+GSPKAS PPPCAP+IRK TAWY ARD++DE S+HHDASHSD+ GG GSHVTSSRRAFLNHVAGAA T PSFGATARGVEEVKKGIE DFLSRRYYVTGDLTPSLYRPDCLFTDPTTRVESVERYTAAVKLLFDPDNAQVDLLSLV+KD+THIFAEWRLQGYLKFPWHPYVKPYTGTTLYTLDS+GLIS HEETWSISALEAARATITPTAGPQAAM SS
Sbjct: 27 QTRPIVSRRTIAHGSPKASTPPPCAPNIRKTTAWYSARDNKDESSLHHDASHSDKYGGNGSHVTSSRRAFLNHVAGAAAVTTAAAGG-TLPSFGATARGVEEVKKGIEADFLSRRYYVTGDLTPSLYRPDCLFTDPTTRVESVERYTAAVKLLFDPDNAQVDLLSLVIKDDTHIFAEWRLQGYLKFPWHPYVKPYTGTTLYTLDSNGLISLHEETWSISALEAARATITPTAGPQAAMESS 266
BLAST of mRNA_E-siliculosus-1a_M_contig9.17045.1 vs. uniprot
Match: D7G4G9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4G9_ECTSI) HSP 1 Score: 246 bits (627), Expect = 1.030e-75 Identity = 120/127 (94.49%), Postives = 122/127 (96.06%), Query Frame = 1
Query: 343 RYYVTGDLTPSLYRPDCLFTDPTTRVESVERYTAAVKLLFDPDNAQVDLLSLVVKDNTHIFAEWRLQGYLKFPWHPYVKPYTGTTLYTLDSDGLISRHEETWSISALEAARATITPTAGPQAAMASS 723
RYYVTGDLTPSLYRPDCLFTDPTTRVESVERYTAAVKLLFDPDNAQVDLLSL VKD+ HIFAEW+LQGYLKFPWHPYVKPYTGTTLYTLDSDGLISRHEETWSISALEAARATITPTAGPQ M SS
Sbjct: 66 RYYVTGDLTPSLYRPDCLFTDPTTRVESVERYTAAVKLLFDPDNAQVDLLSLAVKDDNHIFAEWQLQGYLKFPWHPYVKPYTGTTLYTLDSDGLISRHEETWSISALEAARATITPTAGPQPTMESS 192
BLAST of mRNA_E-siliculosus-1a_M_contig9.17045.1 vs. uniprot
Match: A0A0G4EPM9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EPM9_VITBC) HSP 1 Score: 156 bits (394), Expect = 4.840e-41 Identity = 85/171 (49.71%), Postives = 101/171 (59.06%), Query Frame = 1
Query: 196 SRRAFLNHVA------GAAXXXXXXXXXXTPPSFGATARGVEEVKKGIEGDFLSRRYYVTGDLTPSLYRPDCLFTDPTTRVESVERYTAAVKLLFDPDNAQVDLLSLVVKDNTHIFAEWRLQGYLKFPWHPYVKPYTGTTLYTLDSDGLISRHEETWSISALEAARATITP 690
SRR+ LN V GA+ PP V V + + DFL +YYVTGDLTPS+Y DC+F DPT V+ V+ Y AV+ LFDP +Q DLL L V D++HI EWRL G LK PW P VKPYTG TLYTL+ GLI RHEE W ISA +A +T P
Sbjct: 47 SRRSVLNRVLLLSPFIGASLPRSPSAIAEEPPKL-----DVRTVAETVRRDFLQGQYYVTGDLTPSIYAKDCIFIDPTVTVQGVDTYVRAVRNLFDPATSQADLLGLEVLDDSHIRVEWRLGGSLKLPWKPVVKPYTGRTLYTLNDRGLIVRHEEEWDISAAQAFLSTFIP 212
BLAST of mRNA_E-siliculosus-1a_M_contig9.17045.1 vs. uniprot
Match: A0A2K1L393_PHYPA (Uncharacterized protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L393_PHYPA) HSP 1 Score: 151 bits (382), Expect = 6.090e-39 Identity = 77/139 (55.40%), Postives = 93/139 (66.91%), Query Frame = 1
Query: 286 TARGVEEVKKGIEGDFLSRRYYVTGDLTPSLYRPDCLFTDPTTRVESVERYTAAVKLLFDPDNAQVDLLSLVVKDNTHIFAEWRLQGYLKFPWHPYVKPYTGTTLYTLDSDGLISRHEETWSISALEAARATITPTAGP 702
T VE+VK+ IE D +YYVTG+LTPS+YR +C FTDPTT V V +Y AAV+LLFDPD +Q +LLS+ V I WRL GYLK PW P++ PY G+T YTL DGLI H+ETW+IS L A T T GP
Sbjct: 105 TNLSVEQVKEIIENDIRKGQYYVTGNLTPSIYRDNCKFTDPTTVVTGVNKYVAAVRLLFDPDLSQQELLSIDVTGPRTIEVNWRLGGYLKLPWKPHITPYEGSTRYTLGDDGLIESHDETWNISLLTALLELFTSTWGP 243
BLAST of mRNA_E-siliculosus-1a_M_contig9.17045.1 vs. uniprot
Match: A9RQK3_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RQK3_PHYPA) HSP 1 Score: 151 bits (382), Expect = 4.780e-38 Identity = 77/139 (55.40%), Postives = 93/139 (66.91%), Query Frame = 1
Query: 286 TARGVEEVKKGIEGDFLSRRYYVTGDLTPSLYRPDCLFTDPTTRVESVERYTAAVKLLFDPDNAQVDLLSLVVKDNTHIFAEWRLQGYLKFPWHPYVKPYTGTTLYTLDSDGLISRHEETWSISALEAARATITPTAGP 702
T VE+VK+ IE D +YYVTG+LTPS+YR +C FTDPTT V V +Y AAV+LLFDPD +Q +LLS+ V I WRL GYLK PW P++ PY G+T YTL DGLI H+ETW+IS L A T T GP
Sbjct: 185 TNLSVEQVKEIIENDIRKGQYYVTGNLTPSIYRDNCKFTDPTTVVTGVNKYVAAVRLLFDPDLSQQELLSIDVTGPRTIEVNWRLGGYLKLPWKPHITPYEGSTRYTLGDDGLIESHDETWNISLLTALLELFTSTWGP 323
BLAST of mRNA_E-siliculosus-1a_M_contig9.17045.1 vs. uniprot
Match: A0A176WGH4_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176WGH4_MARPO) HSP 1 Score: 144 bits (362), Expect = 4.940e-36 Identity = 66/131 (50.38%), Postives = 94/131 (71.76%), Query Frame = 1
Query: 298 VEEVKKGIEGDFLSRRYYVTGDLTPSLYRPDCLFTDPTTRVESVERYTAAVKLLFDPDNAQVDLLSLVVKDNTHIFAEWRLQGYLKFPWHPYVKPYTGTTLYTLDSDGLISRHEETWSISALEAARATITP 690
+EE+KK IE D++SR Y VTG++T S+Y+ DC F DPTT V +++Y+ A+K+LFDP +++ +LL + V + +WRL G+L FPWHPY+KPYTG++ YT+D DGLI + E W IS LEA +TP
Sbjct: 110 IEEIKKVIEDDYVSRNYLVTGNMTKSVYKDDCRFHDPTTDVTGLQKYSDALKVLFDP-SSKSELLRIEVSGPRTVDVKWRLSGFLNFPWHPYIKPYTGSSRYTVDEDGLIESYSEEWDISVLEAFAQFLTP 239
BLAST of mRNA_E-siliculosus-1a_M_contig9.17045.1 vs. uniprot
Match: D8RZI8_SELML (Uncharacterized protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RZI8_SELML) HSP 1 Score: 140 bits (352), Expect = 1.460e-35 Identity = 68/131 (51.91%), Postives = 89/131 (67.94%), Query Frame = 1
Query: 298 VEEVKKGIEGDFLSRRYYVTGDLTPSLYRPDCLFTDPTTRVESVERYTAAVKLLFDPDNAQVDLLSLVVKDNTHIFAEWRLQGYLKFPWHPYVKPYTGTTLYTLDSDGLISRHEETWSISALEAARATITP 690
V+E+++ I D R+YYVTGDLT S+Y DC F DPTT V+ V+ Y AAVK LFDP +++ +LL + V T I A+WRLQG LK PW P++ Y GTT YTL+ DG ++ H+ETW IS L A +TP
Sbjct: 37 VDEIEQIIRQDIEDRQYYVTGDLTRSIYSDDCRFIDPTTNVQGVDSYVAAVKSLFDPSDSKHELLEIRVTSPTTIEAKWRLQGSLKLPWKPHIAAYEGTTTYTLNDDGFVASHKETWDISLLTAFIEFLTP 167
BLAST of mRNA_E-siliculosus-1a_M_contig9.17045.1 vs. uniprot
Match: A0A8J4BNC2_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BNC2_9CHLO) HSP 1 Score: 135 bits (339), Expect = 2.400e-32 Identity = 65/140 (46.43%), Postives = 91/140 (65.00%), Query Frame = 1
Query: 286 TARGVEEVKKGIEGDFLSRRYYVTGDLTPSLYRPDCLFTDPTTRVESVERYTAAVKLLFDPDNAQVDLLSLVVKDNTHIFAEWRLQGYLKFPWHPYVKPYTGTTLYTLDSDGLISRHEETWSISALEAARATITPTAGPQ 705
T EEV + + D + +Y+VTGDLT ++ DC F DPT V + +Y A+K+LFDP ++V+LL + V + A+WRL GYL FPW+P V+P+TG T+YTL+ DGL+S +TWSISA A + TPT GP+
Sbjct: 144 TGLSAEEVAEVLRRDLATGQYFVTGDLTREVFADDCRFIDPTNDVTGLSKYLTALKVLFDPQYSKVELLDIRVAGPRTVEADWRLGGYLVFPWNPRVEPFTGHTVYTLNDDGLVSEQRQTWSISAATALIESFTPTFGPR 283
BLAST of mRNA_E-siliculosus-1a_M_contig9.17045.1 vs. uniprot
Match: A0A7J7Q3V0_9CHLO (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q3V0_9CHLO) HSP 1 Score: 129 bits (325), Expect = 2.470e-31 Identity = 67/132 (50.76%), Postives = 92/132 (69.70%), Query Frame = 1
Query: 298 VEEVKKGIEGDFLSRRYYVTGDLTPSLYRPDCLFTDPTTRVESVERYTAAVKLLFDPDNAQVDLLSLVVKDNTHIFAEWRLQGYLKFPWHPYVKPYTGTTLYTLDS-DGLISRHEETWSISALEAARATITP 690
+E++++ IE DF +YYVTG+LT SLY P+C F DPTT V+ V++YTAAV LFDP ++ DL+S V I WRL+G LK P +KPYTG+T+YT+D GLI+RH+E W ISA++A +T+ P
Sbjct: 58 LEDIRQAIERDFSDGQYYVTGNLTSSLYDPNCTFKDPTTNVKGVQKYTAAVAALFDPAVSRADLVSSSVAGPNSISLRWRLEGRLKIGNLP-IKPYTGSTVYTVDEGSGLITRHDEAWDISAVDAFVSTLFP 188
BLAST of mRNA_E-siliculosus-1a_M_contig9.17045.1 vs. uniprot
Match: A0A7S0HE91_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HE91_9CRYP) HSP 1 Score: 130 bits (328), Expect = 5.600e-31 Identity = 63/123 (51.22%), Postives = 85/123 (69.11%), Query Frame = 1
Query: 301 EEVKKGIEGDFLSRRYYVTGDLTPSLYRPDCLFTDPTTRVESVERYTAAVKLLFDPDNAQVDLLSLVVKDNTHIFAEWRLQGYLKFPWHPYVKPYTGTTLYTLDSDGLISRHEETWSISALEA 669
E + + IE D +Y+VTG+LT S+YR DC F DPTT V ++RY AV+ LFDP +++V L S+ ++ I A+W LQG LK PW PY++PY GTT Y +D +GLI H+ETWSI+A EA
Sbjct: 136 EALVRIIERDLSMSQYFVTGNLTRSIYRDDCRFKDPTTDVRGLKRYILAVQNLFDPKDSKVILRSISSIEDNKILAKWSLQGSLKLPWKPYIQPYEGTTTYWIDPEGLIEFHDETWSITATEA 258 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17045.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig9.17045.1 >prot_E-siliculosus-1a_M_contig9.17045.1 ID=prot_E-siliculosus-1a_M_contig9.17045.1|Name=mRNA_E-siliculosus-1a_M_contig9.17045.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=197bp MHHDASHSDESGGYGSHVTSSRRAFLNHVAGAAVAAAAAAAGGTPPSFGAback to top mRNA from alignment at E-siliculosus-1a_M_contig9:1431465..1434581+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig9.17045.1 ID=mRNA_E-siliculosus-1a_M_contig9.17045.1|Name=mRNA_E-siliculosus-1a_M_contig9.17045.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=3117bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:1431465..1434581+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig9:1431465..1434581+ >mRNA_E-siliculosus-1a_M_contig9.17045.1 ID=mRNA_E-siliculosus-1a_M_contig9.17045.1|Name=mRNA_E-siliculosus-1a_M_contig9.17045.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1182bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:1431465..1434581+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |