mRNA_E-siliculosus-1a_M_contig9.17041.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_M_contig9.17041.1
Unique Name	mRNA_E-siliculosus-1a_M_contig9.17041.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig9.17041.1 vs. uniprot
Match: A0A6H5JFC7_9PHAE (PPIase cyclophilin-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC7_9PHAE)

HSP 1 Score: 524 bits (1350), Expect = 2.110e-178
Identity = 297/372 (79.84%), Postives = 309/372 (83.06%), Query Frame = 1

Query:    1 MDINNCGGECVRMRYFVTYSQVFNNRITNCGTHDFVMDGGSKNGEGIYLGTSSNQWDDGKNPSDEADESSYNHFFKNHFDTQGNEGIDIKEGSRYNIVEDNYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGHKIDGHQYGQNNEVYENLLENNDYAGIKITMSPQGAVCSNDILGSKYDSRGSSYAEKLSPEDSCEKLSADLSADGCSDCQDVERLEEELREAKKKCRRNRGERRGERAELDLLENDSKNNDXXXXXXXSDSSXXXXXXXXXXXXSDSXXXXXXXXXSDSDXXXXXXXXXXXXXXXXXXXXXXXXXDGGEKQESDG--TYTTGRIIEETKQSERTQHPTVEYPKYTEFVPPTI 1110
            MDINNCGGECVRMRYFVTYSQV+NNRITNCGTHD+VM+G SKNGEGIYLGTSSNQWDDGKNPSDE DESSYNHFFKNHFDTQGNEGIDIKEG+RYNIVEDNYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGHKIDGHQYGQNNEVYENLLENN YAGIKITMSPQGAVCSNDILGSKYDSRGSSYAEKL PEDSCEKLS D+S D CSDCQDVERLE+ELREAK++CR+N+GER    A LDLLEND KNNDXXXXXXX    XXXXXXXXXXXX   XX                                      GEKQESDG   + TGRIIEETK+SER QHPTVEYPKYTEFVPPTI
Sbjct:  465 MDINNCGGECVRMRYFVTYSQVYNNRITNCGTHDYVMNGSSKNGEGIYLGTSSNQWDDGKNPSDEPDESSYNHFFKNHFDTQGNEGIDIKEGARYNIVEDNYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGHKIDGHQYGQNNEVYENLLENNGYAGIKITMSPQGAVCSNDILGSKYDSRGSSYAEKLKPEDSCEKLSGDISVDDCSDCQDVERLEKELREAKRECRKNKGER----AVLDLLENDGKNNDXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------------GEKQESDGKGAHVTGRIIEETKKSERAQHPTVEYPKYTEFVPPTI 794

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BLAST of mRNA_E-siliculosus-1a_M_contig9.17041.1 vs. uniprot
Match: D7G3L7_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3L7_ECTSI)

HSP 1 Score: 432 bits (1112), Expect = 3.010e-148
Identity = 209/213 (98.12%), Postives = 210/213 (98.59%), Query Frame = 1

Query:    1 MDINNCGGECVRMRYFVTYSQVFNNRITNCGTHDFVMDGGSKNGEGIYLGTSSNQWDDGKNPSDEADESSYNHFFKNHFDTQGNEGIDIKEGSRYNIVEDNYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGHKIDGHQYGQNNEVYENLLENNDYAGIKITMSPQGAVCSNDILGSKYDSRGSSYAEKLSPEDSCEKLSADLSA 639
            MDINNCGGECVRMRYFVTYSQV+NNRITNCGTHDFVMDGGSKNGEGIYLGTSSNQWDDGKNPSDE DESSYNHFFKNHFDTQGNEGIDIKEGSRYNIVEDNYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGHKIDGHQYGQNNEVYENLLENNDYAGIKITMSPQGAVCSNDILGSKYDSRGSSYAEKLSPE SCEKLS DLSA
Sbjct:  161 MDINNCGGECVRMRYFVTYSQVYNNRITNCGTHDFVMDGGSKNGEGIYLGTSSNQWDDGKNPSDEPDESSYNHFFKNHFDTQGNEGIDIKEGSRYNIVEDNYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGHKIDGHQYGQNNEVYENLLENNDYAGIKITMSPQGAVCSNDILGSKYDSRGSSYAEKLSPEGSCEKLSGDLSA 373

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BLAST of mRNA_E-siliculosus-1a_M_contig9.17041.1 vs. uniprot
Match: UPI00036AEC55 (right-handed parallel beta-helix repeat-containing protein n=1 Tax=Hahella ganghwensis TaxID=286420 RepID=UPI00036AEC55)

HSP 1 Score: 227 bits (578), Expect = 8.830e-68
Identity = 111/204 (54.41%), Postives = 140/204 (68.63%), Query Frame = 1

Query:    1 MDINNCGGECVRMRYFVTYSQVFNNRITNCGTHDFVMDGGSKNGEGIYLGTSSNQWDDGKNPSDEADESSYNHFFKNHFDTQGNEGIDIKEGSRYNIVEDNYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGHKIDGHQYGQNNEVYENLLENNDYAGIKITMSPQGAVCSNDILGSKYDSRGSSYAEKLSPEDSC 612
            M + N GGECVR+RY+VT +++F+N   NCG +DF  + G KNGE IY+GTSSNQWDDGKNP+   D S++N    N F T GNE +DIKEG+ YN+VE N C+GQ+DPNSA  D+RGD NIFR+N   DN GAG+R+GG+ +DG QYG NN+VY NLL NN  AG+K+  +PQ  VC N    +       S A    PE SC
Sbjct:  164 MSLKNAGGECVRLRYYVTEAEIFDNTFYNCGVYDFKFNNGGKNGEAIYVGTSSNQWDDGKNPTGGPDPSNHNWIHHNKFLTNGNECVDIKEGAEYNLVEYNICSGQQDPNSAGFDSRGDHNIFRYNVSHDNKGAGVRLGGNTVDGRQYGVNNQVYGNLLYNNAQAGVKLMAAPQEKVCGNPTSDNTEGDIMGSSAMSYDPELSC 367

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BLAST of mRNA_E-siliculosus-1a_M_contig9.17041.1 vs. uniprot
Match: A0A1F7IR59_9BACT (Uncharacterized protein n=1 Tax=Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_38_12 TaxID=1802061 RepID=A0A1F7IR59_9BACT)

HSP 1 Score: 209 bits (531), Expect = 1.020e-61
Identity = 106/204 (51.96%), Postives = 135/204 (66.18%), Query Frame = 1

Query:    1 MDINNCGGECVRMRYFVTYSQVFNNRITNCGTHDFVMDGGSKNGEGIYLGTSSNQWDDGKNPSDEADESSYNHFFKNHFDTQGNEGIDIKEGSRYNIVEDNYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGHKIDGHQYGQNNEVYENLLENNDYAGIKITMSPQGAVCSNDILGSKYDSRGSSYAEKLSPEDSC 612
            M I N GGECVR+RY+   +++  N IT+CG HD+  D G KNGEG+Y+GT+  Q DDGKNP+++ DES+ N    N FDTQGNE +DIKE S+YNIVE+N CTGQKDP S  LD+RG  NIFR+N    N GAGIR+GG  +D +     NEVYEN++ NN   GIKI  +PQG +C N + G+   +    Y E   P   C
Sbjct:   91 MTIKNAGGECVRLRYYAQNNEIAYNTITSCGRHDYKFDDGGKNGEGVYIGTAPEQRDDGKNPTNDNDESNGNWIHHNFFDTQGNECVDIKENSKYNIVENNECTGQKDPESGGLDSRGGYNIFRYNNIYGNSGAGIRLGGDTVDENIM---NEVYENIIVNNKKGGIKIMTAPQGKMCDNIMSGNDGGNAVGEYGEDYDPTKGC 291

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BLAST of mRNA_E-siliculosus-1a_M_contig9.17041.1 vs. uniprot
Match: A0A261GHV7_9GAMM (DUF1565 domain-containing protein n=1 Tax=Hahella sp. CCB-MM4 TaxID=1926491 RepID=A0A261GHV7_9GAMM)

HSP 1 Score: 210 bits (535), Expect = 2.970e-61
Identity = 106/206 (51.46%), Postives = 135/206 (65.53%), Query Frame = 1

Query:    1 MDINNCGGECVRMRYFVTYSQVFNNRITNCGTHDFVMDGGSKNGEGIYLGTSSNQWDDGKNPSDEADESSYNHFFKNHFDTQGNEGIDIKEGSRYNIVEDNYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGHKIDGHQYGQNNEVYENLLENNDYAGIKITMSPQGAVCSNDILGSKYDSRGSSYAEKLSPEDSCEK 618
            M I N GGECVR+RY VT +++F N   NCG +DF  DG  KNGE IY+GTSS QWDDGKNPS + D S+YN    N+F T+GNE +DIKEG+ +N+VE+N C GQ+DP S   DARGD NI R+N    N GAGIR+GG+ ++G QYG  NEVY N + +ND +GIKI   PQ  VC N +  +   +     A    P   C++
Sbjct:  170 MRIRNAGGECVRLRYHVTRAEIFGNTFYNCGAYDFQFDGRGKNGEAIYIGTSSEQWDDGKNPSADPDHSNYNWVHHNYFLTRGNECVDIKEGAAHNLVENNICAGQQDPASGGFDARGDYNIIRYNVSYSNKGAGIRVGGNMVNGRQYGVFNEVYGNKIFDNDNSGIKIMTYPQRYVCGNSMTDNSKGNITGESATFYDPATGCQQ 375

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BLAST of mRNA_E-siliculosus-1a_M_contig9.17041.1 vs. uniprot
Match: A0A1G2MDL9_9BACT (F5/8 type C domain-containing protein n=1 Tax=Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_49_25 TaxID=1802305 RepID=A0A1G2MDL9_9BACT)

HSP 1 Score: 213 bits (542), Expect = 1.450e-60
Identity = 101/205 (49.27%), Postives = 137/205 (66.83%), Query Frame = 1

Query:    1 MDINNCGGECVRMRYFVTYSQVFNNRITNCGTHDFVMDGGSKNGEGIYLGTSSNQWDDGKNPSDEADESSYNHFFKNHFDTQGNEGIDIKEGSRYNIVEDNYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGHKIDGHQYGQNNEVYENLLENNDYAGIKITMSPQGAVCSNDILGSKYDSRGSSYAEKLSPEDSCE 615
            M + N GGEC+R+RYF T S++  N I NCG +DF+ + G KNGEGIY+GTS+ QW DGKNP+++ DE+  N    N+ DTQGNE IDIKEG+  NI+E N C GQKD  S   D+RGD NIFR+N    ++G GIR+GG  ++G QYG+NN+VYEN + +N   GI+   +PQG +C N + G+        +A +  P  SC+
Sbjct:    1 MTLKNSGGECLRLRYFATKSEIAYNTIANCGAYDFLFNAGGKNGEGIYIGTSNKQWGDGKNPTNDPDETKDNLVHHNYIDTQGNECIDIKEGATANIIEYNTCRGQKDSESGGFDSRGDGNIFRYNDVRGSVGGGIRLGGASVNGIQYGKNNDVYENTIVDNKNGGIRFQTTPQGKICGNTMSGNTTGDSAGGFASEFDPIKSCD 205

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BLAST of mRNA_E-siliculosus-1a_M_contig9.17041.1 vs. uniprot
Match: A0A1Y0IFB0_9GAMM (Secreted protein n=2 Tax=Oleiphilus messinensis TaxID=141451 RepID=A0A1Y0IFB0_9GAMM)

HSP 1 Score: 205 bits (522), Expect = 4.610e-59
Identity = 97/183 (53.01%), Postives = 126/183 (68.85%), Query Frame = 1

Query:    1 MDINNCGGECVRMRYFVTYSQVFNNRITNCGTHDFVMDGGSKNGEGIYLGTSSNQWDDGKNPSDEADESSYNHFFKNHFDTQGNEGIDIKEGSRYNIVEDNYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGHKIDGHQYGQNNEVYENLLENNDYAGIKITMSPQGAVCSNDIL 549
            M + N GGECVR++YFVT +++F N I NCG +DF    G KNGEGIY+GT+  QWD+GKNPS + D S+ N  + N F T GNE +DIKEG+ YN++E N C  Q DPNS   DARGD+NIFR+N    N GAG+R+GG    G QYG NN+VY N++  N +AG+K+   PQ  +CSN + 
Sbjct:  186 MILQNAGGECVRLKYFVTQAEIFGNLIRNCGVYDFQFAAGGKNGEGIYIGTAPEQWDNGKNPSADPDHSNGNWVWGNKFYTYGNECVDIKEGAEYNLIEYNACQNQLDPNSGGFDARGDNNIFRYNIAHTNTGAGVRLGGDLHQGRQYGINNQVYGNIIYGNGHAGVKVMSYPQDQICSNMLF 368

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BLAST of mRNA_E-siliculosus-1a_M_contig9.17041.1 vs. uniprot
Match: A0A0G1XWI5_9BACT (Beta_helix domain-containing protein n=3 Tax=Candidatus Moranbacteria TaxID=1752737 RepID=A0A0G1XWI5_9BACT)

HSP 1 Score: 200 bits (508), Expect = 3.810e-57
Identity = 102/201 (50.75%), Postives = 134/201 (66.67%), Query Frame = 1

Query:    1 MDINNCGGECVRMRYFVTYSQVFNNRITNCGTHDFVMDGGSKNGEGIYLGTSSNQWDDGKNPSDEADESSYNHFFKNHFDTQGNEGIDIKEGSRYNIVEDNYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGHKIDGHQYGQNNEVYENLLENNDYAGIKITMSPQGAVCSNDILGSKYDSRGSSYAEKLSPE 603
            M + N GGECVR+RYF   +++ +N IT CG +DF++DG  KNGEGIY+GT+  Q DDGKNP+DE D S+ N    N  DTQGNE +D+KEGS  N+VE+N CTGQKD  S  LD+RG+ NIFR N    N GAGIR+GG + D    G+NN+VY N + +N+  GIK+   PQG +C N + G+        YAE ++ E
Sbjct:  186 MSLKNAGGECVRLRYFAQKNEIADNTITGCGAYDFLLDGKGKNGEGIYIGTAPEQTDDGKNPTDERDHSNGNWVHGNTIDTQGNECVDVKEGSSGNLVENNVCTGQKDSESGGLDSRGNGNIFRNNLVYGNAGAGIRLGGDEDDD---GKNNDVYLNTIRDNEGVGIKVQRYPQGKICGNVLSGNDGGEITEEYAEDIANE 383

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BLAST of mRNA_E-siliculosus-1a_M_contig9.17041.1 vs. uniprot
Match: A0A1F7IHP9_9BACT (Uncharacterized protein n=1 Tax=Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_35_13 TaxID=1802055 RepID=A0A1F7IHP9_9BACT)

HSP 1 Score: 200 bits (508), Expect = 4.450e-57
Identity = 107/204 (52.45%), Postives = 132/204 (64.71%), Query Frame = 1

Query:    1 MDINNCGGECVRMRYFVTYSQVFNNRITNCGTHDFVMDGGSKNGEGIYLGTSSNQWDDGKNPSDEADESSYNHFFKNHFDTQGNEGIDIKEGSRYNIVEDNYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGHKIDGHQYGQNNEVYENLLENNDYAGIKITMSPQGAVCSNDILGSKYDSRGSSYAEKLSPEDSC 612
            M+I N GGECVR+RYF   +++  N I  CG  DF   GG KNGEGIY+GT+  Q  DGKNP+ + DES+ N    N  +TQGNE +DIKEGS  NIVE N CTGQKD  SA LD+RG  NIFR+N    NLGAG+R+GG   D    G NN+VYEN ++NN   GIK   +PQG +C N + G+K      S AE+ +P  SC
Sbjct:  191 MNIKNAGGECVRLRYFAQNNEIAYNSINRCGIVDFEFKGGGKNGEGIYIGTAPEQLKDGKNPTSDIDESNNNLIHHNTINTQGNECVDIKEGSSGNIVEYNNCTGQKDKESAGLDSRGSKNIFRYNEVYGNLGAGVRLGG---DEDNDGINNDVYENTIKNNVSGGIKFQRAPQGKICGNKMEGNKGGDSVGSEAEEFNPTKSC 391

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BLAST of mRNA_E-siliculosus-1a_M_contig9.17041.1 vs. uniprot
Match: UPI0019FF4931 (DUF1565 domain-containing protein n=1 Tax=Chloroflexi bacterium AL-N15 TaxID=2686370 RepID=UPI0019FF4931)

HSP 1 Score: 202 bits (513), Expect = 9.850e-57
Identity = 99/207 (47.83%), Postives = 135/207 (65.22%), Query Frame = 1

Query:    1 MDINNCGGECVRMRYFVTYSQVFNNRITNCGTHDFV---MDGGSKNGEGIYLGTSSNQWDDGKNPSDEADESSYNHFFKNHFDTQGNEGIDIKEGSRYNIVEDNYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGHKIDGHQYGQNNEVYENLLENNDYAGIKITMSPQGAVCSNDILGSKYDSRGSSYAEKLSPEDSC 612
            M   N GGEC+R+RYF   +++  +   NCG  D+      GG KNGE IY+GTS+NQW DGKNP++E D+S+ N    N  +TQGNE +DIKEG+  NIVE N CTGQKD NSA LD+RGD N FR+N    N+G G+R+GG  +DG QYG+NN VY+N++ +N   G+K  ++PQG +C N +  +        +A +  P+ SC
Sbjct:  159 MTFKNAGGECLRLRYFAQNNEIAYSTFLNCGQDDYPGGEWAGGGKNGEAIYIGTSNNQWGDGKNPTNEPDQSNNNWVHNNFMNTQGNECVDIKEGATGNIVEYNECTGQKDENSAGLDSRGDGNTFRYNETYGNVGGGVRLGGALVDGEQYGKNNNVYDNIIYDNIAGGVKFMVTPQGKICGNTMWNNTGGDSFGDFANQFDPKASC 365

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig9.17041.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig9.17041.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JFC7_9PHAE	2.110e-178	79.84	PPIase cyclophilin-type domain-containing protein ...	[more]
D7G3L7_ECTSI	3.010e-148	98.12	FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2...	[more]
UPI00036AEC55	8.830e-68	54.41	right-handed parallel beta-helix repeat-containing...	[more]
A0A1F7IR59_9BACT	1.020e-61	51.96	Uncharacterized protein n=1 Tax=Candidatus Roizman...	[more]
A0A261GHV7_9GAMM	2.970e-61	51.46	DUF1565 domain-containing protein n=1 Tax=Hahella ...	[more]
A0A1G2MDL9_9BACT	1.450e-60	49.27	F5/8 type C domain-containing protein n=1 Tax=Cand...	[more]
A0A1Y0IFB0_9GAMM	4.610e-59	53.01	Secreted protein n=2 Tax=Oleiphilus messinensis Ta...	[more]
A0A0G1XWI5_9BACT	3.810e-57	50.75	Beta_helix domain-containing protein n=3 Tax=Candi...	[more]
A0A1F7IHP9_9BACT	4.450e-57	52.45	Uncharacterized protein n=1 Tax=Candidatus Roizman...	[more]
UPI0019FF4931	9.850e-57	47.83	DUF1565 domain-containing protein n=1 Tax=Chlorofl...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig9	contig	E-siliculosus-1a_M_contig9:1375821..1384289 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Properties


Property Name	Value
Start	1
Stop	1
Cds size	1113
Model size	1113
Exons	10
Ec32 ortholog	Ec-07_000700.1
Ec32 ortholog description	Pectin lyase fold/virulence factor
Hectar predicted targeting category	other localisation
Best eggNOG OG	NA\|NA\|NA
Best tax level	Gammaproteobacteria
COG Functional cat.	P
EggNOG OGs	1NHJ7@1224,1SHNB@1236,COG3420@1,COG3420@2
EggNOG free text desc.	Parallel beta-helix repeats
Seed eggNOG ortholog	1121935.AQXX01000136_gene4114
Seed ortholog evalue	2.4e-57
Seed ortholog score	229.6
Taxonomic scope	Bacteria

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig9.17041.1	prot_E-siliculosus-1a_M_contig9.17041.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	polypeptide	E-siliculosus-1a_M_contig9 1375821..1384289 +

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_M_contig9:1375821..1384289+
coding sequence from alignment at E-siliculosus-1a_M_contig9:1375821..1384289+

protein sequence of mRNA_E-siliculosus-1a_M_contig9.17041.1

>prot_E-siliculosus-1a_M_contig9.17041.1 ID=prot_E-siliculosus-1a_M_contig9.17041.1|Name=mRNA_E-siliculosus-1a_M_contig9.17041.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=371bp
MDINNCGGECVRMRYFVTYSQVFNNRITNCGTHDFVMDGGSKNGEGIYLG
TSSNQWDDGKNPSDEADESSYNHFFKNHFDTQGNEGIDIKEGSRYNIVED
NYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGHKIDGHQYGQ
NNEVYENLLENNDYAGIKITMSPQGAVCSNDILGSKYDSRGSSYAEKLSP
EDSCEKLSADLSADGCSDCQDVERLEEELREAKKKCRRNRGERRGERAEL
DLLENDSKNNDSDSDSDSSDSSDSSSDSDSDSDSSDSSDSSSDSDSSDSD
SSDSDSSDSDSNDSDDKKKDSSDSGDGGEKQESDGTYTTGRIIEETKQSE
RTQHPTVEYPKYTEFVPPTI*

mRNA from alignment at E-siliculosus-1a_M_contig9:1375821..1384289+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_M_contig9.17041.1 ID=mRNA_E-siliculosus-1a_M_contig9.17041.1|Name=mRNA_E-siliculosus-1a_M_contig9.17041.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=8469bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:1375821..1384289+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGACATCAACAACTGCGGTGGCGAGTGTGTCCGAATGCGCTACTTCGT
CACCTACTCTCAGGTGCTTTGGATTCGGTTGCACCCGCTGATTCGAACGA
AGATGCGCATGATGATGCAGTTCTCAGATTGCTGCCCTGCACACACGTGT
TGTGTGCTAGCAGGGGGTCTCTGAAGCAAGCTAACATCAAGGAAAGGGAT
CCTGTAATCGTGTGGTCATGCCTCAGCATCAACGCGTGGTGAATATGAAG
ACAGGGCTCACCATCATCAGCACTTCTTGCAACGCAGTGCCAAATATACG
TTGTATAGAAGTTGCATGTTGCACCAAACACACACACACACGGCACGAGA
CTTACCCATCTCATCAAACATGCGTCCAACCCGTATTTGCTTGGCCAATC
TCGATATGACCCTGCCGCCGTACAGGTTTTCAACAACAGGATCACCAACT
GCGGTACCCACGACTTCGTCATGGACGGCGGTTCCAAGAACGGCGAGGGG
ATTTACCTTGGTAAGGAGTGTTCCATGTTCCGTGATGCTTCTTGGTCTGC
GTGAGATGACCGGCCGCTGCTGGTCTTCCGGTTCGTGTACTACACTATAA
TAGTGAAACGGTGGCAAACTTGAGCTGCCTCCTCATTGGTCGGGTTGTGA
AAGCTAAGAATAGTTGAGAAGTGGTCCCGAGTAGATCTCCGCCATACGGA
CTCCACAAATGCAAAGTGGGCTTGTCGCATTCACGACCGTTCGCATGAAG
TCAACAAAGCTAACGATTTTACGACTCGGTCGTGCCGCGTGGAAACAGGG
ACCTCGTCAAACCAGTGGGATGATGGCAAGAACCCAAGCGACGAAGCCGA
CGAAAGCAGCTACAACCACTTCTTCAAGAACCACTTCGACACACAGGTAG
ACCCTCCTCGCGGTTAGAAGCAGAATGGTTGGGTTCAATGAGGCGTAGAA
CGGGGACAAACGGCGGTTGTCGATCGAAATTCTTGGCACGCTGCGGCGTG
CGCCTTTGAGCCACGCCCAACAACGGGTCGGACGATCCCACCAGCGCATG
GTAGAGCTACGCCGTCGCTCGAGTAAACGTCAAGTGCACAATTTCATATC
GGGAATGATGCATGCTACATCAATGCAACAAGAAAATACTGGTTTGACCA
CATGCGCAAAAACATTGTCGGAACCTGATTAATCGAAGGACAAAAAATAC
ATGCGATGGCGCCCGGGTCTCGGAGCTTTTCAAGGCCGGGGTTCCGTCAG
GAACTTTCCTCGCCAACTCCTCACTGCTGTTCATTCGCTTCTGTACGGAT
TGCCTACAGCCGATGTCTGGCATATTTCGAGGCATCCCGGCTGTCTGATG
CACAACTCGCTCCAAAACACCACCAATTTGTCTGTCGCGAACAAGTTCGT
TCAAAGCGGCAAGCCGGTGGACATCGAAGAGACATCCACGTTCCGAGGCT
ACAAGACATCCAAATGACGCAGGGAGAAAAACACACTGATGACATGGCAG
GGCAGACATTGTCAAGATGATATCATTGGTCGGGGCATGGAGGCTAATTG
TGTTGCCAACTCTCACCATAAGCCCACGGCTTCATCGACAATGCACCGAT
GAAACGTCACGCTTCTGAATCTTTCGAAACGAAACTGTCCAGGGTAACGA
GGGGATCGACATCAAGGAAGGTTCAAGGTACAACATCGTCGAGGACAACT
ACTGCACAGGCCAAAAGGACCCGAACTCTGCATGTGAGGGAAAACTTTAG
GAACGTATTTTCGATGTGGGACTTACTTTTGTGTTGACATCGGCTACACG
TTGATGGCGAAACTCCGAAACATCTTGTGTCGATGCACACGCGAAGCAAC
ACCACGGAGGCATTAACAATGAGGTGTCGTCGAATTTTTCAGTGTGTCCG
TGTAAACCTCAAAGCCAAGCTGCAGTGTTCGGTTTCCAAGTATATCGTAT
AACAGATTGATTTTCAATGGAGAAGTTGAACGGGAGATTGACAATGAAGA
GTTGAACTTCAACCTCCTACGGTTCGATTCGAGGTCGTATTCAACATCCT
TTTCGTACTGGTTGGCGTGAAACTTTCAATCGTCCTGCACGGTACGCCTT
AGACTTGAGGTTTTTGATGGACGGTCGATTTCCTCCTTCACCTGCCCGTT
TTTGTCTGCCGTAGTCAGGCATTCCTACGTAGAGAGGCTCGACTATCTTC
CGATTCAACGCGACGACATTCGTCCGACAACTACGAGCGGGGAAGAAAAC
TGCGTTCGACAAGCCTGTCTTTTTAGATAAACTCAACCTCCTCGTTGCTA
CTCATTTCAGACAATGCTTGTCTGTTGACTCTAACTCGTTTGCTACCGCC
ACCCCAGATGACGGGAACGCCACCACGATCCCGCCGTAACCGGTCAAAAC
AGAACCGGACGATGATATCGACTCTTTCATCATGCTCGTGTATAGAGAAA
ATCACAGGTCTTTCACCTCGTCTCATGCGCCCTCTTTTTACGTTATCGCC
GCTGTGCGATCCACTAGGCCTCGACGCTCGCGGCGACTCCAACATCTTCC
GGTTCAACACCTGCGAGGACAATCTTGGCGCCGGCATCCGCATCGGGGGC
CACAAGATCGACGGCCACCAGTACGGCCAGAATAACGAGGTCTACGAGAA
CCTTCTCGAGAACAACGACTACGCTGGCATCAAGATCACGGTAAGAGCCT
CCCTCATCCTGTCGACACCGATGTGCTTGCTCTAGAAACCACAAGCCTCC
CGAATCTATGCCCTCCCCAGGTTCGCGATCGGGATTGGGTTGCTGTCGAT
AGGCAACGACGTTGTAAAACAAGACGATGACTTCGCGCGCGCTCGGCAAC
CCGGTTACCTCGTGATTTTCTTGCCTTTGTCGGTTTCTTTGTGCGGTAAC
CACAATGGTGGTCGAGCCATTTGATATTGTGCGGGGTCGAGAACCCCCCA
CTCCGGGCAAAGGGGATGATCGGACAACGTTGCGTGAAGTTGGTCAAGCA
CCCTTGAGGCAGTTGCATACTGCGTATCTCTACCGCTGGAAGCGAAAGCA
CCAGAAAAATATCGCATCTCTTATCCGTATGGAAGTAAGAATGCACAAGA
TGCCAAACGCCCTTAGCAGGATGCAGGGCACCCTCCATGCGACTCGCCGA
ATACCTCACGGCGCTTCGCGATTGGTGATGTAAGAGCCTGGCCCAGTGAT
AACCCGGCGTGCTCCGTCCCGGCTTTGTAGGGACGCGAGGTCAATGGTCT
AACGACTACCTGCGGCATGCACGAGTATGAGTACACCCCCCTCCAATCAA
TATCTGTTGCGTCCATAGCGCCCTTAACCGACACCAAGAGTCAAAGTAGC
TGTCAGGTCCATGCCCGTCTGAAGCATTGTTCGTGAAACACCTCGAGTAT
GTTATGCGACCCCATCCCGCCTTTCCTCGAGCCGTTGATTTGTCATTGGC
GTTGCCGTCGTGTCTCTCTCGCTCACGCCGAACACATACGCAGCACCAAC
GAAATTCGACAGCAGGCAGCACAAGCCGTGTTTTTTTAGACACGTGAACG
AATCGCGTGTTTTACGGAAGGGGCGAGAATTCCCGGCCCCCTTGACCCTT
TTCTCGTAGAAAATGCTGTGACACAAACACCTGTAAAATTGTTTCTCCAT
GGTCACAATACTGTAGTTGCCAACTGCAATCGATCATGTTCTTGACCCCG
ACCGCATTTTTAACGCCATTCCAGATGAGCCCTCAAGGGGCAGTGTGCAG
CAACGACATCCTGGGAAGCAAATACGACAGCAGGGGAAGCAGCTACGCCG
AAAAGCTCAGCCCTGAGGACAGCTGCGAGAAGCTGAGCGCCGACCTCTCA
GGTGGGGACCCTACCACCTCTGCGCAGTCGCTCAAAGCACATATCCACAA
CATTTATGAGGACTACTGTAATCTGCATGTGTTGTTGCACATTAATGTAT
TCTGTATCCTCGATGTCCTGGCTCTCTGATGAACAGCCGATGGCTGCAGC
GATTGCCAAGACGTGGAGAGGCTTGAAGAGGAACTTAGGGAAGCCAAGAA
GAAGTGCAGGCGGAACAGGGGGGAACGCAGGGGGGAACGTGCCGAGCTCG
ACCTGCTCGAAAACGACAGCAAAAACAACGACAGCGACAGCGACAGCGAC
AGCAGTGACAGCAGCGACAGCAGCAGCGACAGCGACAGGTGAGTGTTCAG
TGGTTGTTGTGGCCCTTCTTCGCGTTGTTGTGGGTGATTCTCCTGTTCTT
TGACTCCCGGCAACAAACTCTATCGAGTCGGTGGCGCGTAACAGTCGCTT
TTGCCGCGTGCTGTGCGATCGGGGAGTGTGTATCGTACATGGGTACAGCC
GAGGGCAACGGAAGAGATAAAAAACATCAACGGAAATACTGCACCACCAG
AAGGAGGCCACTGCAAGAAAACGACAAACAAACGTGTTTCCGAATACATG
GAAAAGCCGATTTCGCCTCTGAAAAAGCCACGTTCGCTGTTCTCCCCGCG
CTCGCATACTTCTCATTGACGGCGGCAATAAACAATGAATGACCAATATC
TCGGCGTAGGGACGACGAGCTGAAAGGCGCTCACGTACTCTTTGGCATAG
TCCTCTCGGTGTTGCTTGAAGAATTGTTGTCTTCACTGTGCTGCGAAAAC
AATCAAATCCGGCTGCCAATCACAACAGAGGACGCGACCAAAGCTTATAC
CCAAAGTCATAACTCACGTGCCAACTTTGTTGAAAGATGTCGGATACGCT
CGGCCGTTTTCGTGTGGGAATCTCTTTCAAACGCAACTATTTCGTTGAAC
ACCCGCCGGGATAAAAAAAAAACCTGAATATTGACATTAAAGGAGAAGCT
GTCCGCACCAAAAGAGACCATTGAACGTACCGCCATTAAGAAAAATTGGG
AGACACGATAAGAGGACTTCTCTCAACTATGTACATACATGCATACATAC
ATACATATGCAGTACGTAGTCCAGCACGGGCCCTACAAAGAAATCGGTGG
AAGAAGTAGTGTACTGTACATATGTTTTGTGAGACTACGACTTCAGCATT
TACTTATTGGCGACTTCGAAGGTGGGAGGATGTCTTCTTTGTTTCGACCA
TAGCACCGACGGCCCGTTCCCAAGAAAACGTGTCATCATGGGTGTCCAAT
CGCAATATTTCCCCCGAAAAACATGAAATAAAAGATACTTCACAATTTTC
TGCGGTGGATCCTATGTTTCATCCTGTAGGGAAGCCTATGCTCGGGCTAC
GAAATATGAAATTGGGCCCAGACCCGAACTTGACTATTCTATGTTCCGTC
CGGTGCGTTGTAGGGCACGGTAACACTGATAACCTTGTTCGATGGGCACC
TGGATGAGAAGGATTGGTTATCGCCAACTGACAAACAGACTGCATGGAGT
GCACAGTCGTTGGCTAGTCGAACCGAGGGGTTGGAACCCACCGTTGCTGG
CGGTTTCCCGTCCGCCCGGGATGAGCACACAGATGCGTGAATCGAAACAT
ATTTTCTTTTCGCACAGAATCGGTGGTGATTGTCGAACACCCTCTTTTCC
TCGATGTTGTTCCTCGAAAAACTGGAAAAGAAATAGTCTACATTACCACG
AACGGCGATGGAAGGGACGTCTGGGCCCCATTACTGATTGTCATCCCAGC
GGCCTGAATCAAGCCACAGTCACTTCCGAGAGATAAGAGTGTGTTTGGAA
TGTGGTGTGGTGCGCCTTCAAGTGATAACCTTGAGATCGCCGAGACTGAC
CTTAACTTTCCGCGCAAACGACACCCACCCACCGTGCGCGCGACGGATGA
TGACGTGACCGATGACTACGGTAGTGACAGTGACAGCAGTGACAGCAGCG
ACAGTGACAGCAGTGACAGCAGCGACAGCAGCAGTGACAGCGACAGCAGT
GACAGTGACAGCAGTGACAGCGACAGCAGTGACAGCGACTCCAACGACAG
GTGTGCTTCAAAAACCTTGTCCGCAATCAAGTCAACGTCGGATCGAGGCT
CAGTTTCATTTCTATCGTCGATTTTGTTGAGCATAGACTAGCCAATGAAC
CGTAGGATCCACCGCTGAGCTGCGTTTCGTAACCCCACTTGCATATTTCC
GTATACGTGTGGCCCTCTCACAGTAAGTGGACTATGTCTTGCGCCCTTGT
TTTGTGAGAGAAACTCGAAAATCCTACACAACTAAAAAAAACTGAAAACA
CGGTCCCTGAAAGAGCGGTACCAATTTCACTTCTTCCCCCCCGAGTCCGT
GATCAGTTTATCGAGGGTATATGAGTCTGCGATAAGCTCTATCGACACAC
AACACACCACGATGGTCGCTGACTGGGGTGACTCTCACATAGGTGGCCGT
GTGGCGACACGCCATGGCCGGATCACGCTGACCCGTCCACCTCTGCACTG
ATGTTCGAATTGTTTTTTTTGTCCAAGAGCTCGGAGACGTCATCTACAAT
AGACGCATGTATGACTGACCCACCACAAATCAACATGGAACTGTTTCTCA
GCTCAAGAGTGGCAATCCAGGTTGTTTCGACAACACCGACCCGACAATGT
CCTCATTCCTCGTCTTTGAGTGCGATTCCTTCCCATCCATTGACGAACAG
ATAAACCCGCTATAGTGAGTGACCGAAACCTCTCGAGGGGAGTGTTGCAG
CCAAGCTTTGTCGGTCGCTTCGATCGATTTGGTCACCCGTGGCCGACAAA
GAGAGCAAACTTTCAACCCCCTGGTTCATTGCTGCATTTTGCTTGGCCTC
GTGTTTCGAGCGGGGTGACAACCGGTGGTCTCGATGTATCGATCTCCTTC
GCCCTTCAAAACAGTTTGCATGCGACGTCTGACGTACGAGGGGCTCATTT
CTGCCTATGATTCTGTCGTCTTTCCGCATGAATTTGCCTGGGCCCTTCTT
CTGTGATTTTTCATGTATTGTCAACATCGTTTTCTTGGGGGCACTGTCTA
CAGCGGCCTGTGATCAATGCACATCGACCAGTTACGGATATTGAAGGGTA
CTGGGCATTGATCCGACGCTCTTCCAATGTGAAACAACAACTTAACAGCA
TGTGACATCTTACATATTTCCCTGGATGCACCCATACGGTAACATATACC
ATCAGAAACATTTCTTTTGAGTAGGTCGATGGACACTATTGTGGCGGTCG
ATCTCGACCCCCGGGCTGGCCAAACTGTTTACGACGGACTTGTTCCCACA
ACGAGAAGTATTCTTCACAAGTTGGACCGACGGGTCTTCCGAAAGTTGTT
GATGATGGCGATGACGACGATGATGAAGAAGCCGAAATGGTAACTACCTC
GACACTAACACGACCACCGTCTGTGCCAACTTCAACTTTTAGCAGCGACG
ACAAGAAGAAGGACAGCTCCGACAGCGGCGACGGGGGCGAGAAGCAGGAG
AGCGATGGTACGTACACAGTTGTTCCTGCTGACGTGTTCGCCGATTTTCG
GTTCACGCCGTTGTAGTTGAATTAATTTGTCGTCGGGTTCGCAGAATATC
CAAAGATCACTCTCCTGGCGTGATTTTGATGTGTGACGATGCTTGCTGCT
GACAAAAGTGAGATATCAAAGTGAGATACGACTGGGACCGGGATATTAGG
CCGTACAACTACAAATAGATGTGAGAGTGGAACGTTTTTCAACCTCTTGT
GTCACCGATTTGGACCCGAGCGTACTCATCTCTTCGTGTTATGAGCTGAG
AAATGCTTGACCGCCTGTGGTATCGTCAAGCACCAATCAATACTCAAAAC
ATGCTGCAACTGACGGCTACTTCTACCGGACTCCCTTCCTCTTGGTTTGT
AACTGTGGAGGGGGTTGGAGACAGAGAAGATTGAAAAAGGGTCATCGCCC
GCTTTTTAGAACCGAAAGAAATTTCTTTCGCAATCATCGTGTGTACCTCA
ATATGCTGGCACATGTACATATAGTAGCTTGACTCCGGGAGCATGACGAG
CTGTTCCCGGCGTGTATGTAGGACCGATTTCAGAATCGTGACCTGAACAA
CATGAAAGCCCACAGACTAACCTATTGCGTTTCTGCCGATGCCCCGTCGC
GTGGACGCTTGTTCCGCGTTTGTTTGTGTGTTCGACTGTCCGCAGACAAG
GGATCCAACGGAGCCCGTGTGGTAAGTAGGAAATCTGGATTTGTTGTGGT
CATCGTCGGATCGAATTACAACTTGCGCCATTACCCATTACGTGCTGTGT
GAAATATCGAGGTACCCGGCTCGCAGCCCACCTGTCCTTCCCATACATAC
TAAACTATCAACCCCCCCGACCTTGTGATCTGTACCACTGCTTTGGCCGG
CACTGAAATATCCCGCCTTGACACCGAATTCATTGATATGCTGCTCTGCG
CGCATGAAATCATTGACCAGACCGGGCGCATCATCGAAGAAACCAAGCAG
AGCGAGAGGACCCAGCACCCGACCGTCGAGTACCCCAAGTACACCGAATT
CGTGCCGCCCACCATCTAA

Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig9:1375821..1384289+

>mRNA_E-siliculosus-1a_M_contig9.17041.1 ID=mRNA_E-siliculosus-1a_M_contig9.17041.1|Name=mRNA_E-siliculosus-1a_M_contig9.17041.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2226bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:1375821..1384289+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGACATCAACAACTGCGGTGGCGAGTGTGTCCGAATGCGCTACTTCGT
CACCTACTCTCAGATGGACATCAACAACTGCGGTGGCGAGTGTGTCCGAA
TGCGCTACTTCGTCACCTACTCTCAGGTTTTCAACAACAGGATCACCAAC
TGCGGTACCCACGACTTCGTCATGGACGGCGGTTCCAAGAACGGCGAGGG
GATTTACCTTGGTTTTCAACAACAGGATCACCAACTGCGGTACCCACGAC
TTCGTCATGGACGGCGGTTCCAAGAACGGCGAGGGGATTTACCTTGGGAC
CTCGTCAAACCAGTGGGATGATGGCAAGAACCCAAGCGACGAAGCCGACG
AAAGCAGCTACAACCACTTCTTCAAGAACCACTTCGACACACAGGGACCT
CGTCAAACCAGTGGGATGATGGCAAGAACCCAAGCGACGAAGCCGACGAA
AGCAGCTACAACCACTTCTTCAAGAACCACTTCGACACACAGGGTAACGA
GGGGATCGACATCAAGGAAGGTTCAAGGTACAACATCGTCGAGGACAACT
ACTGCACAGGCCAAAAGGACCCGAACTCTGCATGGTAACGAGGGGATCGA
CATCAAGGAAGGTTCAAGGTACAACATCGTCGAGGACAACTACTGCACAG
GCCAAAAGGACCCGAACTCTGCATGCCTCGACGCTCGCGGCGACTCCAAC
ATCTTCCGGTTCAACACCTGCGAGGACAATCTTGGCGCCGGCATCCGCAT
CGGGGGCCACAAGATCGACGGCCACCAGTACGGCCAGAATAACGAGGTCT
ACGAGAACCTTCTCGAGAACAACGACTACGCTGGCATCAAGATCACGGCC
TCGACGCTCGCGGCGACTCCAACATCTTCCGGTTCAACACCTGCGAGGAC
AATCTTGGCGCCGGCATCCGCATCGGGGGCCACAAGATCGACGGCCACCA
GTACGGCCAGAATAACGAGGTCTACGAGAACCTTCTCGAGAACAACGACT
ACGCTGGCATCAAGATCACGATGAGCCCTCAAGGGGCAGTGTGCAGCAAC
GACATCCTGGGAAGCAAATACGACAGCAGGGGAAGCAGCTACGCCGAAAA
GCTCAGCCCTGAGGACAGCTGCGAGAAGCTGAGCGCCGACCTCTCAGATG
AGCCCTCAAGGGGCAGTGTGCAGCAACGACATCCTGGGAAGCAAATACGA
CAGCAGGGGAAGCAGCTACGCCGAAAAGCTCAGCCCTGAGGACAGCTGCG
AGAAGCTGAGCGCCGACCTCTCAGCCGATGGCTGCAGCGATTGCCAAGAC
GTGGAGAGGCTTGAAGAGGAACTTAGGGAAGCCAAGAAGAAGTGCAGGCG
GAACAGGGGGGAACGCAGGGGGGAACGTGCCGAGCTCGACCTGCTCGAAA
ACGACAGCAAAAACAACGACAGCGACAGCGACAGCGACAGCAGTGACAGC
AGCGACAGCAGCAGCGACAGCGACAGCCGATGGCTGCAGCGATTGCCAAG
ACGTGGAGAGGCTTGAAGAGGAACTTAGGGAAGCCAAGAAGAAGTGCAGG
CGGAACAGGGGGGAACGCAGGGGGGAACGTGCCGAGCTCGACCTGCTCGA
AAACGACAGCAAAAACAACGACAGCGACAGCGACAGCGACAGCAGTGACA
GCAGCGACAGCAGCAGCGACAGCGACAGCGACAGTGACAGCAGTGACAGC
AGCGACAGCAGCAGTGACAGCGACAGCAGTGACAGTGACAGCAGTGACAG
CGACAGCAGTGACAGCGACTCCAACGACAGCGACAGTGACAGCAGTGACA
GCAGCGACAGCAGCAGTGACAGCGACAGCAGTGACAGTGACAGCAGTGAC
AGCGACAGCAGTGACAGCGACTCCAACGACAGCGACGACAAGAAGAAGGA
CAGCTCCGACAGCGGCGACGGGGGCGAGAAGCAGGAGAGCGATGGTACGT
ACACACGACGACAAGAAGAAGGACAGCTCCGACAGCGGCGACGGGGGCGA
GAAGCAGGAGAGCGATGGTACGTACACAACCGGGCGCATCATCGAAGAAA
CCAAGCAGAGCGAGAGGACCCAGCACCCGACCGTCGAGTACCCCAAGTAC
ACCGAATTCGTGCCGCCCACCATCTAAACCGGGCGCATCATCGAAGAAAC
CAAGCAGAGCGAGAGGACCCAGCACCCGACCGTCGAGTACCCCAAGTACA
CCGAATTCGTGCCGCCCACCATCTAA