mRNA_E-siliculosus-1a_M_contig9.17025.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.17025.1 vs. uniprot
Match: D7G1G1_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G1_ECTSI) HSP 1 Score: 853 bits (2205), Expect = 1.280e-307 Identity = 458/468 (97.86%), Postives = 462/468 (98.72%), Query Frame = 2
Query: 179 MMGMTAWSGSAAAGLLWCLLLAGTRVQTGSAGSIRLTECPADAPEATFSWENDGDYLYVEGDGSCVTLPDIYNGVDNPPLTHHTVDGDESDTETGIWLLTKHLYMRPGTTLLLHDDLGCTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEMTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGSGSACIAIFESFGIEISDNVCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRSLWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMVIGNTMVGVGESLIDDSDGLVWSVRE 1582
MMGMTAWSGSAAAGLL LLLAGTRVQTGSAGSIRLTECPADAPEATFSW NDGDYLYVEGDGSCVTLPDIYNGVDNPPLT+HTVDGDESDTETGIWLLTKHLYMRPGTTLLLHDDLGCTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEMTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV+GSGSACIAIFESFGIEISDNVCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRSLWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNM+IGNTMVGV ESLIDDSDGL+WS E
Sbjct: 1 MMGMTAWSGSAAAGLLLFLLLAGTRVQTGSAGSIRLTECPADAPEATFSWTNDGDYLYVEGDGSCVTLPDIYNGVDNPPLTYHTVDGDESDTETGIWLLTKHLYMRPGTTLLLHDDLGCTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEMTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTGSGSACIAIFESFGIEISDNVCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRSLWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMLIGNTMVGVEESLIDDSDGLLWSDNE 468
BLAST of mRNA_E-siliculosus-1a_M_contig9.17025.1 vs. uniprot
Match: D7G1G2_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G2_ECTSI) HSP 1 Score: 466 bits (1200), Expect = 2.260e-157 Identity = 269/369 (72.90%), Postives = 292/369 (79.13%), Query Frame = 2
Query: 464 IWLLTKHLYMRPGTTLLLHDDLGCTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEMTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGSGSACIAIFESFGIEISDNVCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRSLWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMVIGNTMVGVGESLIDDSDGLVW 1570
IWL+TK+++M GTTLLLHDDLGC +TSWSV N+ PD GAYDG N RS++SAVSEMTHPSDTCDGAADDDAGEAR+DIINS+V YLGYQA+ESYG++YKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQ YGFDPHDDSDNLRIHNNIVYENGNHGIIASKRC XXXXXXXXXXXXXXXXXXXXXXXXXXXXX SGSGSACIAIFESF IEISDN+CT NEEGIRLSMGSSYNKIFDNQVIDTAGRS+W+YLGSDE+ ASAATDGMCTGNLFQNNYL+G+ GV +ETRD M+IGNT + + DSDGLVW
Sbjct: 3 IWLMTKNIFMESGTTLLLHDDLGCD---------------------------LTSWSVGNRAPDNGAYDGLNARSFISAVSEMTHPSDTCDGAADDDAGEARMDIINSEVAYLGYQASESYGISYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQQ-------------------YGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCNDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSGSACIAIFESFDIEISDNLCTQNEEGIRLSMGSSYNKIFDNQVIDTAGRSIWMYLGSDEVEASAATDGMCTGNLFQNNYLEGSETGVAMTETRDTMLIGNTFIDTDNNEWKDSDGLVW 325
BLAST of mRNA_E-siliculosus-1a_M_contig9.17025.1 vs. uniprot
Match: A0A6H5K9I9_9PHAE (MEP6 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9I9_9PHAE) HSP 1 Score: 312 bits (799), Expect = 2.260e-95 Identity = 216/442 (48.87%), Postives = 282/442 (63.80%), Query Frame = 2
Query: 311 EATFSWENDGDYLYVEGDGSCVTLPDIY-----NGVDNP------------PLTHHTVDGDESDTETGIWLLTKHLYMRPGTTLLLHDDLGCTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSE-MTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGSGSACIAIFESFGIEISDNVCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRSLWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMVIGNTMVGVGESLIDDSDGLVWSVRE 1582
+A+ + + D LY+EG G C+T DIY N ++ P+T T DG+ SD ETG WL T +Y+ G L LH + G T +R+ S S + L GG++S+LNT+++SW V E D A + S PRSY++A+SE + P TC G A +DAGEAR DIINS+V +LG+ E+YG+T+KVRG+C D SN ++FDRVNVRGDIRFSDIHHN+FG Y+YGHQDGLWEYN M + YGFDPHDDSDNLRIHNNIV+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AIFES + S+N CTDN+ G R S+G+S+NKI+DN+V D+ +++Y GSD S DG+ + N+ NN +D A+ G+K +T N GN + + +S ++W +
Sbjct: 36 KASLRFNIETDRLYLEG-GGCITPSDIYLAKLTNVTEDDGNTLTAEEAAAIPITPITKDGEFSDAETGYWLFTSDVYIYDGVKLELHAESGTTGMRLKSDS-KVIELRAHGGWLSLLNTELSSWDVD--EADY-ASNYSAPRSYVTAISEVLDSPPQTCVGHAKNDAGEARFDIINSEVHHLGHYGTEAYGITWKVRGFCVDLSNEDLFDRVNVRGDIRFSDIHHNYFGMYTYGHQDGLWEYNLMHENAKYGFDPHDDSDNLRIHNNIVWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIFESMEGDYSNNKCTDNKYGFRWSVGASHNKIYDNEVYDSQQYGIYMYEGSDLPYVS---DGLPSYNIIANNIIDTATEGIKMGDTVGNEFTGNVITNTADLRFRNSSEVIWKDND 469
BLAST of mRNA_E-siliculosus-1a_M_contig9.17025.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 283 bits (724), Expect = 3.640e-84 Identity = 180/456 (39.47%), Postives = 247/456 (54.17%), Query Frame = 2
Query: 278 IRLTECPADAPEATFSWENDGDYLYVEGD-----GSCVTLPDIYNG-VDNPPLTHHTVD---GDESDTETGIWLLTKHLYMRPGTTLLLH--DDLG-CTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEM-THPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VSGSGSACIAIFESFGIEISDNVCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRSLWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMVIGNTMVGVGESLIDDSDGLVWSVRESFSCVV 1600
I +C +D E + + LY+E G C TL I+ PL + VD GD S+TETG WLLT+ LY+ G TL ++ D+ G ELR+ S+S ++L GG + + TKV SW S PD DG RSY+SAVSE+ T +TC+G A + GEAR+DI NS++GYLG+Q +ESYGLT+KVRG+C D+SNPE+FD VNV G++ SDIHH FG Y+YGHQ G W N M ++ YGFDPHDDSD L IH+N VY NG HGIIASKRC V +G A +A+ ESF ++S+N +N+ G+R+S+G + N +N + + + + + YLGSDE + G N+F N GA +K E + N + D+DGLV ++ + V+
Sbjct: 38 ISKPDCDSDI-EVSIRYAGTTKRLYLESADGETRGGCATLGQIWESRAGKAPL--YAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDG---RSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDE--PDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFE------VGDADGLVVRFDDAMNSVM 479
BLAST of mRNA_E-siliculosus-1a_M_contig9.17025.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE) HSP 1 Score: 273 bits (697), Expect = 1.140e-80 Identity = 169/406 (41.63%), Postives = 221/406 (54.43%), Query Frame = 2
Query: 347 LYVEGD-----GSCVTLPDIYNG-VDNPPLTHHTVD---GDESDTETGIWLLTKHLYMRPGTTLLLHDDLG---CTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEM-THPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VSGSGSACIAIFESFGIEISDNVCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRSLWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMVIGNT 1519
LY+E G CVTL I+ VD PL + VD GD S + TG WLLT+ +Y+ G TL +H ELR+ S+S +HL +GG + L+TKV +W S PD DG RSY+SAVSE+ T TC+G A ++ GEAR+DI NS++ YLGY E+YGLT+KVRG+C D+ NPE+FD VNV G+I SDIHHN FG Y+YGHQ G W N M ++ YGFDPHDDSD L IH+N V+ NG HGIIASKRC V +G A +A+ ESF ++SDN +N+ G+RLS+G N N + +A + + YLG+D+ G N+F N + G + E I NT
Sbjct: 27 LYIESANGRTRGGCVTLEQIWEQQVDGSPL--YAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDG---RSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADK--PEVVDSGRSQDNVFMENNIIGGVESILLKEADGTQFIDNT 425
BLAST of mRNA_E-siliculosus-1a_M_contig9.17025.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE) HSP 1 Score: 271 bits (692), Expect = 1.250e-79 Identity = 173/393 (44.02%), Postives = 226/393 (57.51%), Query Frame = 2
Query: 365 GSCVTLPDIYNGV--DNPPLTHHTVDGDESDTETGIWLLTKHLYMRPGTTLLLHDDLG---CTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEM-THPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGSG--SACIAIFESFGIEISDNVCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRSLWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMVIGNT 1519
G CVTL I+ + P + GD SD+ TG WLLT+ L++ G TL +H ELR+ S+S ++L GG + L+TKV +W S PD DG RSY+SAVSE+ T S TC+G A ++ GEAR+DI +S++GYLGY +ESYGLT+KVRG+C D+SN ++F+ VNV G+I SDIHHN FG Y+YGHQ G W N M ++ YGFDPHDDSD L IH+N VY+NG HGIIASKRC XXXXXXXXX A +A+ ESF ++SDN+ +N+ GIR S+GS N F+N + + S + YLGSD G N+FQ N + G +K + I NT
Sbjct: 64 GGCVTLEQIWEHQRGEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDG---RSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDA--PDVVDSGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNT 451
BLAST of mRNA_E-siliculosus-1a_M_contig9.17025.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 270 bits (690), Expect = 3.110e-79 Identity = 167/411 (40.63%), Postives = 227/411 (55.23%), Query Frame = 2
Query: 365 GSCVTLPDIYNG-VDNPPLTHHTVD---GDESDTETGIWLLTKHLYMRPGTTLLLH-DDLG--CTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEM-THPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VSGSGSACIAIFESFGIEISDNVCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRSLWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMVIGNTMVGVGESLIDDSDGLV 1567
G CVTL I+ PL + VD G+ S + TG WLLT+ LY+ G TL ++ + G ELR+ S++ ++L GG + ++TKV SW S PD DG RSY+SA+SE+ T +TC+G A + GEAR+DI +S++GYLGY +ESYGLT+KVRG+C D+SNPEVFD VNV G++ SDIHH FG Y+YGHQ G W N M ++ YGFDPHDDSD L IH+N VY NG HGIIASKRC V +G A +A+ ESF ++S+N +N+ G+R S+G + N +N + + A + + YLG+DE + G N+F N GA +K E + N + D+DGLV
Sbjct: 67 GGCVTLGQIWESRAGKGPL--YAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDG---RSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDE--PDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFE------VGDADGLV 464
BLAST of mRNA_E-siliculosus-1a_M_contig9.17025.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 256 bits (655), Expect = 7.770e-75 Identity = 168/425 (39.53%), Postives = 229/425 (53.88%), Query Frame = 2
Query: 353 VEGDGS-CVTLPDIY-------NGVDNPPL----THHTVDGDESDTETGIWLLTKHLYMRPGTTLLLHDD-LG--CTELRIASSS-TNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEMTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VSGSGSACIAIFESFGIEISDNVCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRSLWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMVIGNTMVGVGESLIDDSDGLVWS 1573
EGDG C TL D+Y NG P+ ++ VD + + T TG WLLT L++ G TL +G C ELRI S+S ++ + GG + +T VTSW V ++P DG RS++ VSE+ DTC A ++ GE R+DII+S++GYLGY A+E+YG+T+KVRG+C+D SNP+VFD VNV GD++ SDIHH ++G YS+GHQ G+W N M ++ YGFDPHDDSD L I N VY N NHGIIASKRC ++ G A IA+ E+ G +I DN E GIR+ +GSS NK+ DN + ++ Y+GSDE G N F NN + GVK E+ + + N G E +++ +VWS
Sbjct: 4 AEGDGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVD-ETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDG---RSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG---GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWS 418
BLAST of mRNA_E-siliculosus-1a_M_contig9.17025.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA) HSP 1 Score: 255 bits (652), Expect = 8.530e-74 Identity = 161/350 (46.00%), Postives = 210/350 (60.00%), Query Frame = 2
Query: 365 GSCVTLPDIYNGVDN--PPLTHHTVDGDESDTETGIWLLTKHLYMRPGTTLLLHDDLG---CTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEM-THPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VSGSGSACIAIFESFGIEISDNVCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRSLWLYLGSD 1390
G CVTL DI+ +D P GD S + TG WLLT+ LY+ G TL +H ELR+ S+S + ++L GG + ++TKV +W S + D S RSY+SAVSE+ T CDG A + GEAR+DI +S++ YLGY +ESYGLT+KVRG C D SN EVFD VNV G+I SDIHHN+FG Y+YGH+ G W N M ++ YGFDPHDDSD L IH+N VY NGNHGIIASKRC XXXXXXXXXX V +G A +A+ E+F ++S+N DN+ GIR+S+G + N N + ++ +++ Y GSD
Sbjct: 64 GGCVTLEDIWRDLDGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRT---DDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSSKYNVYTYQGSD 410
BLAST of mRNA_E-siliculosus-1a_M_contig9.17025.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 263 bits (673), Expect = 1.930e-73 Identity = 169/428 (39.49%), Postives = 226/428 (52.80%), Query Frame = 2
Query: 347 LYVEGDGSCVTLPDIYN--GVDNPPLTHHTV-----DGDESDTETGI---WLLTKHLYMRPGTTLLLHDDLG---CTELRIASSSTNALH-LNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEMTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VSGSGSACIAIFESFGIEISDNVCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRSLWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMVIGNTMVGVGESLIDDSDGLVWSVRE 1582
LY EG+G C T+ D+YN G +N + V DG + D +GI WLL LY+ G C +LRI S+ ++ H + GG + +T VTSW NKEP Y+ N RS+++ VSE D C+G A ++ GE R+DIINS++ YLGY +ESYG+T+KVRG+C D SNPEVF+ NV GD+ SDIHH ++G YSYGHQ G+W N M ++ YGFDPHDDSD L I N VY N NHGIIASKRC ++ A IA+ ESF +I N+ + GIR+S+GS N+++ N D + L+ Y GSDE S DG +GN+ N ++ IGVK E DN NT + V +S +WS +
Sbjct: 442 LYAEGEG-CFTMTDLYNFRGTENDGSSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQE-TYE--NGRSFLNCVSEKL-TGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS---DGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGND 861 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17025.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig9.17025.1 >prot_E-siliculosus-1a_M_contig9.17025.1 ID=prot_E-siliculosus-1a_M_contig9.17025.1|Name=mRNA_E-siliculosus-1a_M_contig9.17025.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=557bp MMGMTAWSGSAAAGLLWCLLLAGTRVQTGSAGSIRLTECPADAPEATFSWback to top mRNA from alignment at E-siliculosus-1a_M_contig9:1206104..1216605- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig9.17025.1 ID=mRNA_E-siliculosus-1a_M_contig9.17025.1|Name=mRNA_E-siliculosus-1a_M_contig9.17025.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=10502bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:1206104..1216605- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig9:1206104..1216605- >mRNA_E-siliculosus-1a_M_contig9.17025.1 ID=mRNA_E-siliculosus-1a_M_contig9.17025.1|Name=mRNA_E-siliculosus-1a_M_contig9.17025.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=3342bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:1206104..1216605- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |