mRNA_E-siliculosus-1a_M_contig9.17002.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.17002.1
Unique NamemRNA_E-siliculosus-1a_M_contig9.17002.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.17002.1 vs. uniprot
Match: D7G1I8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I8_ECTSI)

HSP 1 Score: 297 bits (761), Expect = 2.010e-92
Identity = 161/210 (76.67%), Postives = 162/210 (77.14%), Query Frame = 1
Query:    1 HAAKEQFVDTMAVLANAGVVDTGIALIGAIKENRERSIKFLLRQQQLQGKPTGAYVDEARDPFGRTPLLCSIEDEGDRWCFPRIVRMIIDAGADTTSAVRVSKLGFLPVEETPLGLVDHYLGENRVIGRDITEEQAHNLNAVHRLLLRVEAVHAASWLWVSDSPDIAHTAEVTNRPMVTPSARSRMLPVLGLSTRRNALLPAVLRYSSKT 630
            HAAKEQFVDTMAVLANAGVVDTGIALIGAIKENRE SIKFLLRQQQLQG PTGAYVDEARDPFGRTPLLCSIEDEG                                       LVDHYLGENRVIGRDITEEQAH LNAVHRLLLRVEAVHAASWLWVSD+PDIAHTAEVT R  VTPS RSRM PVLGLSTRRNALL AVLRYSSKT
Sbjct:  224 HAAKEQFVDTMAVLANAGVVDTGIALIGAIKENREGSIKFLLRQQQLQGNPTGAYVDEARDPFGRTPLLCSIEDEG---------------------------------------LVDHYLGENRVIGRDITEEQAHKLNAVHRLLLRVEAVHAASWLWVSDAPDIAHTAEVTKRTKVTPSPRSRMFPVLGLSTRRNALLSAVLRYSSKT 394          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17002.1 vs. uniprot
Match: A0A6H5JWZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWZ8_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 8.700e-76
Identity = 141/209 (67.46%), Postives = 153/209 (73.21%), Query Frame = 1
Query:    1 HAAKEQFVDTMAVLANAGVVDTGIALIGAIKENRERSIKFLLRQQQLQGKPTGAYVDEARDPFGRTPLLCSIEDEGDRWCFPRIVRMIIDAGADTTSAVRVSKLGFLPVEETPLGLVDHYLGENRVIGRDITEEQAHNLNAVHRLLLRVEAVHAASWLWVSDSPDIAHTAEVTNRPMVTPSARSRMLPVLGLSTRRNALLPAVLRYSSK 627
            HAAKEQFVDTMAVLA AG+VDTGIALIGAIKEN E SIKFLLRQ   +G P                 + +IEDEG RWCFPRIVRMI+DA ADTTSAVRV KLG LPV+ETPLGL                   AH L+AVHRLLLRVEA+HAASWLWVSD+PDIAHTAEVT R  V P ARSRMLPVLGLSTRRNALL AVLR++ +
Sbjct:  158 HAAKEQFVDTMAVLATAGMVDTGIALIGAIKENLEGSIKFLLRQSSCKGNPP----------------VPTIEDEGGRWCFPRIVRMIVDAVADTTSAVRVLKLGLLPVKETPLGL-------------------AHKLSAVHRLLLRVEALHAASWLWVSDAPDIAHTAEVTKRTKVIPPARSRMLPVLGLSTRRNALLSAVLRWAGR 331          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17002.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 6.760e-38
Identity = 97/224 (43.30%), Postives = 123/224 (54.91%), Query Frame = 1
Query:   16 QFVDTMAVLANAGVVDT-GIALIGAIKENRERSIKFLLRQQQLQGKPTGAYVDEARDPFGRTPLLCSIEDEGDRWCF---PRIVRMIIDAGADTTSAVRVSKL-GFLPVEETPLGLVDHYLGENRVIGRDITEEQAHNLNAVHRLLLRVEAVHAASWLWVSDSPDIAHTAEVTNRPMVTPSARSRMLPVLGLSTRRNALLPAVLRYSSKT*PPLSGESRIFASL 672
            Q +D MA+L  AGV D  G  L+G     RE S++FLLRQ++ + + +      + D  G TPL CSIE     WC    PRIVR+++DAGADTTS VRV+ L G +   +TPL +    L E  V G+  TEEQ H L A+ RLLLRV+AVHA SWLW SD+P I H  E +  P       S  LP+L    +   +  A L  SS   P  SG     A L
Sbjct:    3 QHMDIMAILTGAGVRDAMGYVLLGTAGLGREASVQFLLRQRRKESEMSVHAYANSSDGSGMTPLSCSIE-----WCSSGNPRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSLLREKVVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVERSCGPEPRRPPLSLTLPILKRRAKTCHVFVATLLRSS---PISSGRGSRRADL 218          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17002.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 3.620e-37
Identity = 94/213 (44.13%), Postives = 124/213 (58.22%), Query Frame = 1
Query:    4 AAKEQFVDTMAVLANAGVVDTGIALIGAIKENRERSIKFLLRQQQLQGKPTGAYVDEARDPFGRTPLLCSIEDEGDRWCFPRIVRMIIDAGADTTSAVRVSKLG-FLPVEETPLGLVDHYLGENRVIGRDITEEQAHNLNAVHRLLLRVEAVHAASWLWVSDSPDIAHTAEVTN---RPMVTPSARSRMLPVLGLST-RRNALLPAVLRYSSK 627
            AA EQ+VD M +L   GVVDTG AL+ A + +RE S+KFLL+ Q   G     YV+   DPFGRTPL+C+IE  G     PRI R +ID GADT S V V++ G +    +TPLG     L +N+V G++ TEEQ  +L A+HRLL ++EAVHA SWLW S    I H     +   +P        RM  VL  +  +R  +L AV R + +
Sbjct:  221 AATEQYVDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQAGGGT---WYVNNTLDPFGRTPLVCTIEACGSS--SPRIARFLIDDGADTKSTVLVTRSGEWTTSRDTPLGFATRSLRQNKVGGKNATEEQLRSLKAIHRLLSQIEAVHAVSWLWRSSDTPIGHAVGAASSRMKPTTAGPTLKRMSTVLRTTVGKRGVVLRAVYRAAEE 428          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17002.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 1.890e-34
Identity = 92/205 (44.88%), Postives = 117/205 (57.07%), Query Frame = 1
Query:    4 AAKEQFVDTMAVLANAGVVDTGIALIGAIKENRERSIKFLLRQQQLQGKPTGAYVDEARDPFGRTPLLCSIEDEGDRWCFPRIVRMIIDAGADTTSAVRVSKLG-FLPVEETPLGLVDHYLGENRVIGRDITEEQAHNLNAVHRLLLRVEAVHAASWLWVSDSPDIAHTAEVTNRPMVTPSARSRMLPVLGLSTRRNALLPAVLR 615
            A  EQ VD M +L   GVVDTG AL+ A + +RE S+KFLL+ Q   G     YV+   DPFGRTPL+C+IE  G     PRI R +IDA ADT S V V+K G +    +TPLG   H L +N+V  ++ TEEQ  +L A+HRLL +V+AVHA SWLW S           T       +A SRM P +     +   +P VLR
Sbjct:  211 ATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQAGGG---AWYVNNTLDPFGRTPLVCTIEACGSS--SPRIARFLIDAEADTKSTVLVTKSGQWTTSRDTPLGFATHSLRQNKVGRKNATEEQLRSLKAIHRLLSQVDAVHAVSWLWRSSD---------TRNSYAVGAASSRMKPTIAGPLLKR--MPTVLR 399          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17002.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 1.820e-33
Identity = 90/216 (41.67%), Postives = 124/216 (57.41%), Query Frame = 1
Query:    4 AAKEQFVDTMAVLANAG-VVDTGIALIGAIKENRERSIKFLLRQQQLQGKPTGAYVDEARDPFGRTPLLCSIEDEGDRWCFPRIVRMIIDAGADTTSAVRVSKLG--FLPVEETPLGLVDHYLGENRVIGRDITEEQAHNLNAVHRLLLRVEAVHAASWLWVS-DSPDIAHTAEVTNRPMVTPSARSRMLPVLGLSTR----RNALLPAVLRYSSK 627
            AA E+ ++ MAVL +AG VVDTG ALI A +  R  ++KFLLR++Q       AYV+  RDP+GRTP++C+++    R C P+IVR+++DAGA+TT AV V+++   +    ETPL      L E RV G   T+EQ   L     LL R EAVHA SWLW S + P IA  A  T     + +  + +  +  +  R    R  LL  + RYS K
Sbjct:  223 AADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQADAD---AYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRYSRK 435          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17002.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 7.180e-33
Identity = 90/216 (41.67%), Postives = 118/216 (54.63%), Query Frame = 1
Query:    4 AAKEQFVDTMAVLANAGVVDTGIALIGAIKENRERSIKFLLRQQQLQGKPTGAYVDEARDPFGRTPLLCSIEDEGDRWCFPRIVRMIIDAGADTTSAVRVS-KLGFLPVEETPLGLVDHYLGENRVIGRDITEEQAHNLNAVHRLLLRVEAVHAASWLWVSDSPDIAHTA------EVTNRPMVTPSARSRMLPVLGLSTRRNALLPAVL-RYSSK 627
            AA +  +D M  L  AGVVDTGIAL+ A        +KFLL+QQ        AYV   RDP GRTPL+C+I+   ++ C P++VR+++DAGADTTS VR + + G LPV  TPL L    L       + I +E    L  + RLLLRVEAVHA SWLW +  P +   A      E  +     P  R+ +LP+L    R    + A L RY+ K
Sbjct:  224 AAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRT-VLPILRRRARGRGFVSASLCRYAVK 438          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17002.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 7.850e-32
Identity = 98/217 (45.16%), Postives = 123/217 (56.68%), Query Frame = 1
Query:    4 AAKEQFVDTMAVLANAGVVDTGIALIGAIKENRERSIKFLLRQQQLQGK--PTGAYVDEARDPFGRTPLLCSIEDEGDRWCF---PRIVRMIIDAGADTTSAVRVSKL-GFLPVEETPLGLVDHYLGENRVI-GRDITEEQAHNLNAVHRLLLRVEAVHAASWLWVSDSPDIAHTAEVTNRPMVTPSARSRMLPVLGLSTRRNA-LLPAVLRYSSKT 630
            AA  Q +D MA+L  AGVVDTG AL  A     E S+KFLLR +  +G     GAY++ ARD  G TPL+   +      CF   PRIVRM++DAGADTTS V+V  L G +   +TPL      L +  V  G+  T+E    L A+ RLLLRV+AVHA SWLW S +P I    E    P +   A   MLP+L   T+R   L+  +LRYS KT
Sbjct:  319 AASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLN-ARDVNGYTPLVVCTQG-----CFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRATETDPEPPLP--ALKLMLPILKRRTKRRCGLVATLLRYSVKT 527          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17002.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 2.840e-30
Identity = 86/206 (41.75%), Postives = 120/206 (58.25%), Query Frame = 1
Query:   22 VDTMAVLANAGVVD-TGIALIGAIKENRERSIKFLLRQQQLQGKPTGAYVDEARDPFGRTPLLCSIEDEGDRWCFPRIVRMIIDAGADTTSAVRV-SKLGFLPVEETPLGLVDHYLGENRVIGRDITEEQAHNLNAVHRLLLRVEAVHAASWLWVSDSPDIAHTAEVTNRPMVTPSARSRMLPVLGLSTRRNALL-PAVLRYSSKT 630
            VD M++L +AGVVD  G+AL+ A+   +E ++ FLLRQQ+ + + +  YV+ ARD  G T LL S     ++ C PRI R ++DAGADTTSAV++ +K     V  TPL  V+ +           T+EQ   L A  R+LLRV AVHA SW+W SD+P +A  A        +P+  + +LPVL     R ALL   + RYS K+
Sbjct:  203 VDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQQEERWQTS--YVNIARDDDGLTALLWSFRGNKNKPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPANSPRTAKHSPTQLTTVLPVLRRRAGRRALLWDTLFRYSKKS 406          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17002.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 4.870e-29
Identity = 87/216 (40.28%), Postives = 116/216 (53.70%), Query Frame = 1
Query:    4 AAKEQFVDTMAVLANAGVVDTGIALIGAIKENRERSIKFLLRQQQLQGKPTGAYVDEARDPFGRTPLLCSIEDEGDRWCFPRIVRMIIDAGADTTSAVRVSKLGFLPVEETPLGLVDHYLGENRVIGRDI-TEEQAHNLNAVHRLLLRVEAVHAASWLW-------VSDSPDIAHTAEVTNRPMVTPSARSRMLPVLGLSTRRNALLPAVLRYSSK 627
            AA +Q +D MA+L +AGVVDTG AL+  +   RER++KFLL +Q+ +G     Y    RD  G TPLL ++       C PR+VR+++DAGAD T AVRV        + TPL      L E +V+  D  T +Q  NL A  RLLL+VE VHA SWLW        +     A T     +P+     +SR+  +   S RR A LP V R + K
Sbjct:  222 AAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLL-EQKGEGTARTTYASTPRDGRGHTPLLSAVTTGP---CSPRVVRLLVDAGADATLAVRVPDGFGRSTKYTPLDCATRCLAE-KVVDEDFATAQQLRNLRASRRLLLQVEVVHATSWLWGGHAGCPAAPGKKRAQTESTNGKPL-----KSRLPIMWRRSARRGAALPGVFRLAKK 427          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17002.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1I8_ECTSI2.010e-9276.67EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JWZ8_9PHAE8.700e-7667.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSC5_ECTSI6.760e-3843.30EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G1U9_ECTSI3.620e-3744.13EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5K037_9PHAE1.890e-3444.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1H7_ECTSI1.820e-3341.67EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1... [more]
D7FVK3_ECTSI7.180e-3341.67EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FT11_ECTSI7.850e-3245.16EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FVU3_ECTSI2.840e-3041.75EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LL76_ECTSI4.870e-2940.28EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:915830..918262 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size603
Model size1657
Exons2
Ec32 orthologEc-07_001190.1
Ec32 ortholog descriptionEsV-1-199-related ankyrin repeat protein
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.G
EggNOG OGsCOG0666@1,KOG4177@2759
EggNOG free text desc.response to abiotic stimulus
Seed eggNOG ortholog2880.D7G1I8
Seed ortholog evalue2.5e-72
Seed ortholog score278.5
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.17002.1prot_E-siliculosus-1a_M_contig9.17002.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig9 915860..917238 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936390.2245138-UTR-E-siliculosus-1a_M_contig9:915829..9158591622936390.2245138-UTR-E-siliculosus-1a_M_contig9:915829..915859Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig9 915830..915859 +
1696251056.2520823-UTR-E-siliculosus-1a_M_contig9:915829..9158591696251056.2520823-UTR-E-siliculosus-1a_M_contig9:915829..915859Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig9 915830..915859 +
1622936390.2725158-UTR-E-siliculosus-1a_M_contig9:917238..9182621622936390.2725158-UTR-E-siliculosus-1a_M_contig9:917238..918262Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig9 917239..918262 +
1696251056.2772775-UTR-E-siliculosus-1a_M_contig9:917238..9182621696251056.2772775-UTR-E-siliculosus-1a_M_contig9:917238..918262Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig9 917239..918262 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936390.2433016-CDS-E-siliculosus-1a_M_contig9:915859..9164431622936390.2433016-CDS-E-siliculosus-1a_M_contig9:915859..916443Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 915860..916443 +
1696251056.261566-CDS-E-siliculosus-1a_M_contig9:915859..9164431696251056.261566-CDS-E-siliculosus-1a_M_contig9:915859..916443Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 915860..916443 +
1622936390.2598045-CDS-E-siliculosus-1a_M_contig9:917219..9172381622936390.2598045-CDS-E-siliculosus-1a_M_contig9:917219..917238Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 917220..917238 +
1696251056.269453-CDS-E-siliculosus-1a_M_contig9:917219..9172381696251056.269453-CDS-E-siliculosus-1a_M_contig9:917219..917238Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 917220..917238 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig9.17002.1

>prot_E-siliculosus-1a_M_contig9.17002.1 ID=prot_E-siliculosus-1a_M_contig9.17002.1|Name=mRNA_E-siliculosus-1a_M_contig9.17002.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=201bp
MAVLANAGVVDTGIALIGAIKENRERSIKFLLRQQQLQGKPTGAYVDEAR
DPFGRTPLLCSIEDEGDRWCFPRIVRMIIDAGADTTSAVRVSKLGFLPVE
ETPLGLVDHYLGENRVIGRDITEEQAHNLNAVHRLLLRVEAVHAASWLWV
SDSPDIAHTAEVTNRPMVTPSARSRMLPVLGLSTRRNALLPAVLRYSSKT
*
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mRNA from alignment at E-siliculosus-1a_M_contig9:915830..918262+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig9.17002.1 ID=mRNA_E-siliculosus-1a_M_contig9.17002.1|Name=mRNA_E-siliculosus-1a_M_contig9.17002.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2433bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:915830..918262+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CACGCCGCCAAGGAACAGTTTGTAGACACCATGGCCGTTTTGGCTAATGC TGGAGTGGTCGACACGGGTATCGCCCTTATCGGCGCGATCAAGGAAAATC GGGAAAGGTCGATCAAATTCCTCTTGCGGCAGCAGCAGCTGCAAGGGAAA CCCACCGGTGCCTACGTGGACGAAGCGCGCGACCCTTTCGGCAGAACTCC ACTGCTATGCAGCATTGAAGATGAAGGTGATAGATGGTGCTTTCCCAGGA TCGTGCGGATGATTATTGACGCCGGCGCGGACACGACATCGGCAGTTCGA GTGTCGAAACTTGGGTTTTTACCTGTGGAAGAAACCCCCCTAGGGCTCGT GGACCACTACCTCGGCGAGAACAGGGTCATAGGAAGGGACATCACAGAAG AGCAGGCCCACAATCTGAACGCCGTCCACCGTTTGCTGCTGAGGGTTGAG GCAGTTCACGCAGCCTCTTGGCTGTGGGTAAGCGATTCCCCAGATATCGC TCATACTGCAGAGGTTACAAATAGGCCCATGGTGACTCCGTCCGCGCGCA GCAGGATGCTGCCGGTTCTAGGATTGAGCACAAGACGCAACGCCCTTCTG CCGGCCGTGCTCAGGTGGGCAGGATGTATTGGTTCAGGGCCGGAACTATT GCGCTTATCTCTTGGGTATGTTGAATAGATCTAGTGGACAGTAGTTCATC GAAAGGTTGATCGGCACTCAAACAGTAGTCAGGAACCTATCGATGTGTCT AGATCAATCTTGCGGGGGTTCGAACTGTGAAGTTGTCCGGGGGGCGTCCA TCGCGTAGAATTCGACAGATAAGCACCTCGAAAAGGAGTAATCATATCCA TACTAGGAATCCACCAGATGGCGGTAGCAGTCCCTTGTCACGTTGAACTT CCTTGGTTTAGACGTGGTTTTCTGCTGCGACAATCACCATGAGAATACAC TGGCTGTTTGTCGCGGTGCCAACTTGACGTGTGACATGGTACGTTTGCGG CAAGGTACTATGGCCCGTTTCTCTACATCATTGATACCGCTATAGTCCTG TTTGTATTGATGTAGACTGGCTGCCATCCTGCCGTCTCGAATCCCGTTCT GTAAATATGCGATTTTTGGTGGGTGTGTCGACGAAATCGTAAATGTCTTG TTTTACCTCTAGAACCTATTTTGGTTGCTACTGCCACACCAAGGTTCGAG CCATGTTTGACCTGCCGACGTCCACACCGACCGGCGGTCAAGTCGATCTG ATTATTGACCTTGGCAGGCGTCCGCATCATTGGAGATGTTTGAAGGTACT GAGCAGAGCCCGCAAGGGTTTTATTGTTGAAGAAACAACAGTCAACAGTA GCGCCATTGTTCTTGGCGCTCTCACATGTGTCTTTTACAGGTATTCATCG AAGACCTGACCTCCCTTGAGCGGTGAGAGCCGCATTTTCGCCAGTCTACC TGCTTGCTCCATGGACTGGCGCTTCGTGCATTGCTCCCCCTGGGCATGCA CGGGAGATGGGTTGCCAGTTAACGAGGCACGACATTATGCGGTGGATGGC ACATCCAGCACACGAGAGTTGCGAAGCGGTTCCAACGGTGGTGCGTGCGC CACAATGGCGGCATGTGCAGTGGCTCGATGTGGTGGTGTTTTTTGTCGAT GTTCTCAGTGTTTCGTTTTTTTGTTTGGTGCAGATGATTAACTGGACGCA CAGGGCGCTCGCTACCCATGCAGGTTGCGTTTCAATGTACCAGTCTTAGG CCTCGCTTGATTGAATTTCCCTCCGTTACCCACCAAGGTGGCCATTGCTG TTAATAATATATCCCAAAAAAGTGTTGTTAACGGTATAGTTATGATTTTT CGATTCCGAGGACTTCACTTCACTGGCACGACACTGCGTTCTCGTTGTTG TATTAGTTATTTTCCTGTTGCAATCGGGACGTTGACCGCTTGACGGTCCA AGCAGTTCTGGTTTCGTCGCTGATTGGTCGTTCGAAGCGTTGTGGCAACC GCACGGCTCGTGTTCGTGCATTCTGACGATATAAAAAGCGACGCATGCAG CTGTCGCCATGCTCCAAGAGATGAGATAATTCTTTGTTAAAGTCGACGCT GCAACACTGCGTCGTGTACTTGTTTCAGTAGTTAGAACAAGAGGGTACAG GTTGGACACGTGCACTTTTGTGAGTCCGCTTCCGCTGGATGTACCGATAG CGTGATTTCGCCAAAATGTGAAGAAAATGCGCTGAATATTGGCATTGCGT CCTCTTGCTCTTGCTCATCGCGGTACTAGCCAGAATGTCGCTAGAACAGA AATCAGATAATTTGTCGACACGCATGAATTATATCTGCAAAGAATATCAA GGTAACAAAATCGGATTGGGTTCGCACAACCTTTTGCAACGTTCGCGAGT ATGCGGATGAATTTGAATATGTCGGCGTAGCGG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig9:915830..918262+

>mRNA_E-siliculosus-1a_M_contig9.17002.1 ID=mRNA_E-siliculosus-1a_M_contig9.17002.1|Name=mRNA_E-siliculosus-1a_M_contig9.17002.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1206bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:915830..918262+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGCCGTTTTGGCTAATGCTGGAGTGGTCGACACGGGTATCGCCCTTAT
CGGCGCGATCAAGGAAAATCGGGAAAGGTCGATCAAATTCCTCTTGCGGC
AGCAGCAGCTGCAAGGGAAACCCACCGGTGCCTACGTGGACGAAGCGCGC
GACCCTTTCGGCAGAACTCCACTGCTATGCAGCATTGAAGATGAAGGTGA
TAGATGGTGCTTTCCCAGGATCGTGCGGATGATTATTGACGCCGGCGCGG
ACACGACATCGGCAGTTCGAGTGTCGAAACTTGGGTTTTTACCTGTGGAA
GAAACCCCCCTAGGGCTCGTGGACCACTACCTCGGCGAGAACAGGGTCAT
AGGAAGGGACATCACAGAAGAGCAGGCCCACAATCTGAACGCCGTCCACC
GTTTGCTGCTGAGGGTTGAGGCAGTTCACGCAGCCTCTTGGCTGTGGGTA
AGCGATTCCCCAGATATCGCTCATACTGCAGAGGTTACAAATAGGCCCAT
GGTGACTCCGTCCGCGCGCAGCAGGATGCTGCCGGTTCTAGGATTGAGCA
CAAGACGCAACGCCCTTCTGCCGGCCGTGCTCAGATGGCCGTTTTGGCTA
ATGCTGGAGTGGTCGACACGGGTATCGCCCTTATCGGCGCGATCAAGGAA
AATCGGGAAAGGTCGATCAAATTCCTCTTGCGGCAGCAGCAGCTGCAAGG
GAAACCCACCGGTGCCTACGTGGACGAAGCGCGCGACCCTTTCGGCAGAA
CTCCACTGCTATGCAGCATTGAAGATGAAGGTGATAGATGGTGCTTTCCC
AGGATCGTGCGGATGATTATTGACGCCGGCGCGGACACGACATCGGCAGT
TCGAGTGTCGAAACTTGGGTTTTTACCTGTGGAAGAAACCCCCCTAGGGC
TCGTGGACCACTACCTCGGCGAGAACAGGGTCATAGGAAGGGACATCACA
GAAGAGCAGGCCCACAATCTGAACGCCGTCCACCGTTTGCTGCTGAGGGT
TGAGGCAGTTCACGCAGCCTCTTGGCTGTGGGTAAGCGATTCCCCAGATA
TCGCTCATACTGCAGAGGTTACAAATAGGCCCATGGTGACTCCGTCCGCG
CGCAGCAGGATGCTGCCGGTTCTAGGATTGAGCACAAGACGCAACGCCCT
TCTGCCGGCCGTGCTCAGGTATTCATCGAAGACCTGAGTATTCATCGAAG
ACCTGA
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