mRNA_E-siliculosus-1a_M_contig9.17000.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.17000.1 vs. uniprot
Match: A0A6H5JS45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS45_9PHAE) HSP 1 Score: 368 bits (944), Expect = 3.360e-126 Identity = 182/212 (85.85%), Postives = 188/212 (88.68%), Query Frame = 1
Query: 103 MCPSRTKGVSFYSVPHYQENAYHLHNDNFMPTSTNILSTPCLCDGVELSSCNRFEKTNVRTPQVKQKHGSTNPEFLDVFNTLFNHTLHLNKGAHGTNLVIFLHRNAVGSGKDKTSRFMRDLKPLRDAWAAEGIHMNDWRYSGSDSLKKMVGSLSGYDIYLGVHGAELTNVLYGNQGLVLVEVMSEGWDKEIFHKVAQARRGGYIKLRTLPAS 738
MCPSRTKGVSFYSVPHYQENAYHLHNDNFMPTSTNILSTPCLCDGVELSSCNR EKTNVRTPQ+KQKHGSTNPEFLDVFNTLFNHTLHLNKGAHGTNL + G + FMRD+KPLRDAWAAEGIHMNDWRY+GSDSLKKMVGSLSGYDIYLGVHGAELTNVLYGNQGLVLVEVMSEGWDK ARRGG+IKLRTLPAS
Sbjct: 1 MCPSRTKGVSFYSVPHYQENAYHLHNDNFMPTSTNILSTPCLCDGVELSSCNRIEKTNVRTPQLKQKHGSTNPEFLDVFNTLFNHTLHLNKGAHGTNL------GEMRVGFIFHAAFMRDVKPLRDAWAAEGIHMNDWRYNGSDSLKKMVGSLSGYDIYLGVHGAELTNVLYGNQGLVLVEVMSEGWDK--------ARRGGFIKLRTLPAS 198 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17000.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig9.17000.1 >prot_E-siliculosus-1a_M_contig9.17000.1 ID=prot_E-siliculosus-1a_M_contig9.17000.1|Name=mRNA_E-siliculosus-1a_M_contig9.17000.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=300bp MPGLRSLRPQKCRRKGVQKSGSPIVVHDGPLEETMCPSRTKGVSFYSVPHback to top mRNA from alignment at E-siliculosus-1a_M_contig9:892797..900369+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig9.17000.1 ID=mRNA_E-siliculosus-1a_M_contig9.17000.1|Name=mRNA_E-siliculosus-1a_M_contig9.17000.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=7573bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:892797..900369+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig9:892797..900369+ >mRNA_E-siliculosus-1a_M_contig9.17000.1 ID=mRNA_E-siliculosus-1a_M_contig9.17000.1|Name=mRNA_E-siliculosus-1a_M_contig9.17000.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1800bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:892797..900369+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |