mRNA_E-siliculosus-1a_M_contig9.16991.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.16991.1 vs. uniprot
Match: D7G1J7_ECTSI (Ubiquinone Biosynthesis Monooxygenase COQ6 (C-terminal region) Ubiquinone Biosynthesis Monooxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J7_ECTSI) HSP 1 Score: 1010 bits (2612), Expect = 0.000e+0 Identity = 551/594 (92.76%), Postives = 561/594 (94.44%), Query Frame = 2
Query: 92 MLGSGMAWRHSRVAASRNMTRLRSHRAFSSAPAGLGDKAAGWEFDHDVIVVGGGIVGCTLACRLAKDLSSTTPSTSGLPPLSTGKDDXXXXXXXXXXXXXXPAVGLIEARPPPSLEAALARGSPDPRVYSLAPSSVEILGKLGVWDDGGGVLKGRSQPFGGMQVWDDRGAGHLRFDGEGKEGKTAALGFISEHGVIHSSLFERVQELEADGLAELTCPAQARGMQVTFPPVGAGGATGPLKVTIETASGETSDTTCRLLVAADGGDSKARSRRFCQRGPKSCACTASVAKMMGLSSFGWGYGQRAVVATVKLAESHGEVAFQRYLSRGPLAMLPLPGGNLASLVWSTTPEHAESLKSMSPTEFVKEVNDALRLPPTIGTSPSSSAEPASFSGTVPPFAGDHGLFGGVSSLAALPFATASALGEGVAKSAEGVAGALAGLSLGLQEGAGGGGRGGFCTPPEAIEVVTPRLGFDLSLRQAHKYTGDRMALVGDAAHTVHPMAGQGLNLGIADADALARAVLEGRLSGTDVGSKTLLGRYEEERKTEALVMMGALDVLHRLFGSDARTVAAARSAGLSALNAAGPLKRRLARHAMGG 1873
MLGSGMAWRHSRVAASRNMTRLRSHRAFSSAPAGLGDKAAGWE+DHDV+VVGGGIVGCTLACRLAKDLSSTTPST GLPPLSTGKDD XXXXXXXXXXXXXPAVGLIEARPPPSLEAALARG+PDPRVYSLAPSSVEILGKLGVWD+GGGVLKGRSQPFGGMQVWDDRGAGHLRFDGEGK GKT ALGFISEHGVIHSSLFERV+ELEADGLAELTCPAQ + +VTFPPVGAGGATGPL VT+ETASGETSDTTCRLLVAADGGDSK VAKMMGLSSFGWGYGQRAVVATVKLAESHGEVAFQRYLSRGPLAMLPLPGG LASLVWSTTPEHAESLKSMS TEFVKEVNDALRLPPTIGTSPSSSAEPASFSGTVPPFAG+HGLFGGVSSLAALPFATASALGEGVAK AEG+AGALAGLSLGLQEGAG GGRGGFCTPPEA EVVTPRLGFDLSLRQAHKYTGDRMALVGDAAHTVHPMAGQGLNLGIADADALARAVLEGRLSGTDVGSKTLLGRYEEERKTEALVMMGALDVLHRLFGSDAR VAAARSAGLSALNAAGPLKRRLARHAMGG
Sbjct: 1 MLGSGMAWRHSRVAASRNMTRLRSHRAFSSAPAGLGDKAAGWEYDHDVLVVGGGIVGCTLACRLAKDLSSTTPSTIGLPPLSTGKDDGXXXXXXXXXXXXXPAVGLIEARPPPSLEAALARGAPDPRVYSLAPSSVEILGKLGVWDEGGGVLKGRSQPFGGMQVWDDRGAGHLRFDGEGKGGKTTALGFISEHGVIHSSLFERVRELEADGLAELTCPAQVK--RVTFPPVGAGGATGPLTVTVETASGETSDTTCRLLVAADGGDSK-------------------VAKMMGLSSFGWGYGQRAVVATVKLAESHGEVAFQRYLSRGPLAMLPLPGGKLASLVWSTTPEHAESLKSMSTTEFVKEVNDALRLPPTIGTSPSSSAEPASFSGTVPPFAGEHGLFGGVSSLAALPFATASALGEGVAKGAEGIAGALAGLSLGLQEGAGDGGRGGFCTPPEATEVVTPRLGFDLSLRQAHKYTGDRMALVGDAAHTVHPMAGQGLNLGIADADALARAVLEGRLSGTDVGSKTLLGRYEEERKTEALVMMGALDVLHRLFGSDARAVAAARSAGLSALNAAGPLKRRLARHAMGG 573
BLAST of mRNA_E-siliculosus-1a_M_contig9.16991.1 vs. uniprot
Match: A0A6H5KUH3_9PHAE (FAD_binding_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUH3_9PHAE) HSP 1 Score: 731 bits (1888), Expect = 1.950e-258 Identity = 396/438 (90.41%), Postives = 405/438 (92.47%), Query Frame = 2
Query: 578 QVWDDRGAGHLRFDGEGKEGKTAALGFISEHGVIHSSLFERVQELEADGLAELTCPAQARGMQVTFPPVGAGGATGPLKVTIETASGETSDTTCRLLVAADGGDSKARSRRFCQRGPKSCA-----CTASVAKMMGLSSFGWGYGQRAVVATVKLAESHGEVAFQRYLSRGPLAMLPLPGGNLASLVWSTTPEHAESLKSMSPTEFVKEVNDALRLPPTIGTSPSSSAEPASFSGTVPPFAGDHGLFGGVSSLAALPFATASALGEGVAKSAEGVAGALAGLSLGLQEGAGGGGRGGFCTPPEAIEVVTPRLGFDLSLRQAHKYTGDRMALVGDAAHTVHPMAGQGLNLGIADADALARAVLEGRLSGTDVGSKTLLGRYEEERKTEALVMMGALDVLHRLFGSDARTVAAARSAGLSALNAAGPLKRRLARHAMGGK 1876
+VWDDRGAGHLRFDGEGK G+TAALGFISEH VIHSSLFERV+E EADGLAEL C R VTFPPVGAGGATGPL VT+ETASGETSDTTCRLLVAADGGDSKAR+RRF RGPKS A C VAKMMGLSSFGWGYGQRAVVATVKLAESHGEVAFQRYLSRGPLAMLPLPGG LASLVWSTTP HAESLKSMS TEFVKEVNDALRLPPTIGTSPSSSAEPASFSGTVPPFAGDHGLFG VSSLAALPFATASALGEG AKSAEGVAGALAGLSLGLQEGAGGGG GGFCTPPEA+EVVTPRLGFDLSLRQAH+YTG RMALVGDAAHTVHPMAGQGLNLGIADADALARAVLEGRLSGTDVGS TLLG YE++RKTEALVMMGALDVLHRLFGSDAR VAAARSAGLSALNAAGPLKRRLARHAMGGK
Sbjct: 42 KVWDDRGAGHLRFDGEGKGGRTAALGFISEHSVIHSSLFERVREFEADGLAELACMQVKR---VTFPPVGAGGATGPLTVTVETASGETSDTTCRLLVAADGGDSKARNRRFYLRGPKSFASSLRGCRPRVAKMMGLSSFGWGYGQRAVVATVKLAESHGEVAFQRYLSRGPLAMLPLPGGKLASLVWSTTPVHAESLKSMSTTEFVKEVNDALRLPPTIGTSPSSSAEPASFSGTVPPFAGDHGLFGRVSSLAALPFATASALGEGFAKSAEGVAGALAGLSLGLQEGAGGGGTGGFCTPPEAVEVVTPRLGFDLSLRQAHRYTGARMALVGDAAHTVHPMAGQGLNLGIADADALARAVLEGRLSGTDVGSTTLLGHYEQDRKTEALVMMGALDVLHRLFGSDARAVAAARSAGLSALNAAGPLKRRLARHAMGGK 476
BLAST of mRNA_E-siliculosus-1a_M_contig9.16991.1 vs. uniprot
Match: A0A835Z6E6_9STRA (Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6E6_9STRA) HSP 1 Score: 317 bits (811), Expect = 4.600e-96 Identity = 234/582 (40.21%), Postives = 300/582 (51.55%), Query Frame = 2
Query: 185 PAGLGDKAAG--WEFDHDVIVVGGGIVGCTLACRLAKDLSSTTPSTSGLPPLSTGKDDXXXXXXXXXXXXXXPAVGLIEARPPPSLEAALARGSPDPRVYSLAPSSVEILGKLGVWDDGGGVLKGRSQPFGGMQVWDDRGAGHLRFDGEGKEGKTAA-----LGFISEHGVIHSSLFERVQELEADGLAELTCPAQARGMQVTF----PPVGAGGATGPLKVTIE-------TASGETSDTTCRLLVAADGGDSKARSRRFCQRGPKSCACTASVAKMMGLSSFGWGYGQRAVVATVKLAESHGEVA--FQRYLSRGPLAMLPLPGGNLASLVWSTTPEHAESLKSMSPTEFVKEVNDALRLPPTIGTSPSSSAEPASFSGTVPPFAGDHGLFGGVSSLAALPFATASALGEGVAKSAEGVAGALAGLSLGLQEGAGGGGRGGFCTPPEAIEVVTPRLGFDLSLRQAHKYTGDRMALVGDAAHTVHPMAGQGLNLGIADADALARAVLEGRLSGTDVGSKTLLGRYEEERKTEALVMMGALDVLHRLFGSDARTVAAARSAGLSALNAAGPLKRRLARHAMG 1870
PA L AAG W++D+DV+VVGGGIVG LAC+LA+ P G +GL+E R PP++ +AR +PD RVY+LAPSSV L +G W + R+ F M VWD RG G LRFD +A LG +EH + ++LFER++ L ADG L CP + + PP GP++ T+ L+VAADGG SK R ++ GL SFGWGYGQRAVV TV L E G+ A +QRYL RGPLA+LPL G AS+VWSTTPE AE LK++ P F++ +N ALR +A P PPFAG +P A+A EG A +GG P A+ + PRLGFDLSL Q+ YT R+ALVGDAAHTVHPMAGQGLNLG++DA+ALA A+ E LSG D+GS L RY+ +R+ M+G LD LHR+F + A VA AR+AG++ ++A+ LK +AR AMG
Sbjct: 19 PACLCTDAAGGAWDYDYDVLVVGGGIVGAALACKLAE-----IPKAGG-----------------------SFKIGLVEGRAPPTVADVMARPTPDARVYTLAPSSVHFLDSVGAW----AAVAPRAHAFSRMHVWDARGRGALRFDARTAAASASAAAPPALGHTAEHTALQAALFERLRALHADGALALLCPRELAALDFRGTEREPP-------GPMRATLSGXXXXXXXXXXXXXXXXXXLVVAADGGASKVR-------------------RLRGLRSFGWGYGQRAVVCTVAL-ERGGDAATAWQRYLPRGPLALLPLWDG-FASVVWSTTPEEAEELKALPPGAFLERLNAALR---------GDAAPPP------PPFAG-------------IPLLGAAA--EGAANXXXXXXXXXXXXXXXXXXXSGG---DTAVVSPLAVGLPGPRLGFDLSLAQSAAYTAPRVALVGDAAHTVHPMAGQGLNLGLSDAEALAAAIREAALSGGDIGSVQALSRYDSDRRMRNAAMLGGLDALHRVFATGAAPVALARNAGMALIDASPQLKAAIARVAMG 507
BLAST of mRNA_E-siliculosus-1a_M_contig9.16991.1 vs. uniprot
Match: A0A7S2S5V6_9STRA (Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5V6_9STRA) HSP 1 Score: 274 bits (700), Expect = 1.080e-79 Identity = 202/556 (36.33%), Postives = 276/556 (49.64%), Query Frame = 2
Query: 221 FDHDVIVVGGGIVGCTLACRLAKDLSSTTPSTSGLPPLSTGKDDXXXXXXXXXXXXXXPAVGLIEARPPPSLEAALARGSP-DPRVYSLAPSSVEILGKLGVWDDGGGVLKG--RSQPFGGMQVWDDRGAGHLRFDGEGKEG-KTAALGFISEHGVIHSSLFERVQELEADGLAELTCPAQARGMQVTFPPVG-AGGATGPLKVTIETASGETSDTTCRLLVAADGGDSKARSRRFCQRGPKSCACTASVAKMMGLSSFGWGYGQRAVVATVKLAESHGEVAFQRYLSRGPLAMLPLPGGNLASLVWSTTPEHAESLKSMSPTEFVKEVNDALRLPPTIGTSPSSSAEPASFSGTVPPFAGDHGLFGGVSSLAALPFATASALGEGVAKSAEGVAGALAGLSLGLQEGAGGGGRGGFCTPPEAIEVVTPRLGFDLSLRQAHKYTGDRMALVGDAAHTVHPMAGQGLNLGIADADALARAVLEGRLSGTDVGSKTLLGRYEEERKTEALVMMGALDVLHRLFGSDARTVAAARSAGLSALNAAGPLKRRLARHAMGG 1873
+DHDV VVGGG+VG A RLA+ SS ++ +G++E RPPP LE AL+ +P D R Y++ P S + L LGVW +L+ R QP+ MQ+W+ G G++RFD + LG I E+ + ++LF R++ELEA+G L CPAQ M P G GP ++ + + G D T RL++AADG S R + G+ ++GWGYGQ+AVVATV+L + H + A+QR++ GP+A+LPL G AS+VWST A L +S T+FVK +N AL P +EP + PFA L S A L G F + PE V + R DLSL QA YTG+R+ L+GDAAHTVHP+AGQGLNLG+ DA+ + + +GTD+GS L YE RK L MM LD +HRLF + + R+ G+S LNAA P+K ++ + AMGG
Sbjct: 54 WDHDVTVVGGGVVGAAAAIRLAE--SSIFQGSN---------------------------IGVVETRPPPGLEEALSPATPPDVRTYAMTPGSEKFLRSLGVWQ----LLEEAERLQPYSAMQIWEWGGDGYMRFDSHNHAPHEQQHLGTIVENRALQAALFHRLKELEANGRVTLYCPAQVASMSFPTAPRGDPNSPIGPARLRL-VSEGMDLDLTSRLVLAADGAKSPTR-------------------QAAGIPTWGWGYGQKAVVATVEL-QQHTDTAWQRFIRSGPIAILPLKGP-YASIVWSTDTAEANHLAKLSDTDFVKALNGALAAP----------SEPFASQYLPTPFAMVDSLLATASRAARLT------------------------------------GDQAFESAPEVCAVASRRFALDLSLSQARTYTGNRLCLLGDAAHTVHPLAGQGLNLGLGDAEHICEVIEAAARAGTDIGSPQHLISYEHTRKLANLQMMALLDGIHRLFAVEPGPLRWLRNTGMSVLNAAPPVKSQVVKFAMGG 508
BLAST of mRNA_E-siliculosus-1a_M_contig9.16991.1 vs. uniprot
Match: W7U180_9STRA (Ubiquinone biosynthesis monooxygenase coq6 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U180_9STRA) HSP 1 Score: 268 bits (686), Expect = 1.980e-77 Identity = 226/617 (36.63%), Postives = 284/617 (46.03%), Query Frame = 2
Query: 167 RAFSSAPAGLGDKAAGWEFDHDVIVVGGGIVGCTLACRLAKDLSSTTPSTSGLPPLSTGKDDXXXXXXXXXXXXXXPAVGLIEARPPPSLEAALARGS-PDPRVYSLAPSSVEILGKLGVWDDGGGVLKGRSQPFGGMQVWDDRGAGHLRFD------------------GEGKEGKTAALGFISEHGVIHSSLFERVQELEADGLAELTCPAQARGMQVTFPPVGAGGATGPLKVTIETASGETSDTTCRLLVAADGGDSKARSRRFCQRGPKSCACTASVAKMMGLSSFGWGYGQRAVVATVKLAE---------------------SHGE----VAFQRYLSRGPLAMLPLPGGNLASLVWSTTPEHAESLKSMSPTEFVKEVNDALRLPPTIGTSPSSSAEPASFSGTVPP-----FAGDHGLFGGVSSLAALPFATASALGEGVAKSAEGVAGALAGLSLGLQEGAGGGGRGGFCTPPEAIEVVTPRLGFDLSLRQAHKYTGDRMALVGDAAHTVHPMAGQGLNLGIADADALARAVLEGRLSGTDVGSKTLLGRYEEERKTEALVMMGALDVLHRLFGSDARTVAAARSAGLSALNAAGPLKRRLARHAMG 1870
R FSS A G W D+DVI++GGGIVG +LAC LA+++ G+ + L+E RPPP L A LA PDPRVY+LAP+SV L LG W ++K R + + MQVW+ G+G +RFD GEGKE K LG ++E+ + ++LF+ + L+A GL E+ CP Q + F G TGP +VT G S T RLLV ADG S+ V K GL S+GW Y QRAVVATV L E SH A+Q +L +GPLA LPL G S+VWSTTP A+ LK++ F+ E+N L+ P IG +P SF VP G H L V AAL GF P +V PRL FDL A Y G R ALVGDAAHT+HPMAGQGLNLG+ADA AL+ + G + G DVGS L RY+ R+ L M+G L LH LFG + R+ GL LNA P+K ++A AMG
Sbjct: 21 RLFSST-APHGTSTDSW--DYDVIILGGGIVGASLACSLAENVGQR----HGM------------------------KIALLEIRPPPPLAACLAPDRLPDPRVYALAPASVAFLESLGAWQ----LIKDRKRDYQYMQVWEGGGSGSIRFDAAKAKVMGLGSTRAEGSNGEGKERKK--LGTMAENSTLQAALFQCMISLQAQGLLEVLCPVQVEA--IAFDTSGTD-PTGPARVTWAGKDGVRSQVTTRLLVGADGAASR-------------------VKKARGLPSWGWDYAQRAVVATVSLDEQADAADAPSPRPSTTLSANKLSHSSSSPATAWQTFLPQGPLAFLPL-WGPYHSIVWSTTPAEADRLKALPREAFLAELNAKLQCP--IGL-----LDPPSFPSYVPQPLVKALVGAHHLVESVVVSAAL--------------------------------------SQGFHVAPIVRDVCGPRLSFDLRAEHASAYVGARAALVGDAAHTIHPMAGQGLNLGLADAMALSTLIEAGVVEGQDVGSPLFLRRYQNARQAANLGMLGGLTALHGLFGRKEGSWRWLRNVGLGTLNALDPVKAKMAEVAMG 532
BLAST of mRNA_E-siliculosus-1a_M_contig9.16991.1 vs. uniprot
Match: A0A024U7F0_9STRA (Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U7F0_9STRA) HSP 1 Score: 239 bits (610), Expect = 4.200e-67 Identity = 191/557 (34.29%), Postives = 270/557 (48.47%), Query Frame = 2
Query: 227 HDVIVVGGGIVGCTLACRLAKDLSSTTPSTSGLPPLSTGKDDXXXXXXXXXXXXXXPAVGLIEARPPPSLEAALAR-GSPDPRVYSLAPSSVEILGKLGVWDDGGGVLKGRSQPFGGMQVWDDRGAGHLRFDGEGKEGKTAA-LGFISEHGVIHSSLFERVQELEAD---GLAELTCPAQARGMQVTFPPVGAGGATGPLKVT----IETASGETSDTTCRLLVAADGGDSKARSRRFCQRGPKSCACTASVAKMMGLSSFGWGYGQRAVVATVKLAESHGEVAFQRYLSRGPLAMLPLPGGNLASLVWSTTPEHAESLKSMSPTEFVKEVNDALRLPPTIGTSPSSSAEPASFSGTVPPFAGDHGLFGGVSSLAALPFATASALGEGVAKSAEGVAGALAGLSLGLQEGAGGGGRGGFCTPPEAIEVVTPRLGFDLSLRQAHKYTGDRMALVGDAAHTVHPMAGQGLNLGIADADALARAVLEGRLSGTDVGSKTLLGRYEEERKTEALVMMGALDVLHRLFGSDARTVAAARSAGLSALNAAGPLKRRLARHAMG 1870
DV++VGGGIVG LAC L + P+ GK V +IE PP L+ A A G PD RVY++ P+S ++ +GVWD + PFG MQVWD G G +RFD + K LG++ EHGV+ +L R++EL + ++ PA+ R + GP +V + G + RL+VAADGG S R K+ L ++GW Y Q+AVVATVK + A+QR+L GP+A+LPL G +S+VWST HA LKS+SP EFV E+N+AL P S + P P G+ LF G+ LAA A AL + F +PP+A E V R+ F L L+ A +Y+ +AL+GD+AH++HP+AGQGLNLG+AD +L + +G +G +G + L Y+ +RK + M A+D LFG V AR+ G+S+LNA P+K ++ ++AMG
Sbjct: 42 QDVVIVGGGIVGSALACNLKSN------------PVFHGKK-----------------VTVIEPSPPNKLDDANAPLGIPDARVYTITPASKKLFEAIGVWDK---IKPEHIAPFGHMQVWDAMGDGFIRFDAAKAQVKNGRDLGYVLEHGVLQRALALRMEELASQDDPNPLQVLSPAEVRNFE------------GPGEVQRAGIVHLEDGR--EIRSRLVVAADGGKSMIR-------------------KLSALGTWGWTYDQQAVVATVK-TDQINTTAWQRFLPSGPIALLPLRDG-YSSVVWSTNENHAIELKSISPEEFVAELNEALNKP-------SETPSPPQI-----PILGN--LFQGIH-LAAQTVLAAGALADP------------------------------FQSPPKATEAVGRRVSFPLKLQHATRYSKYGVALIGDSAHSIHPLAGQGLNLGLADVTSLGNLLSQGVQAGVHLGDEQFLQNYDNDRKKANISMALAMDGFKNLFGPAPDAVLVARNVGMSSLNAVDPVKTQIMKYAMG 486
BLAST of mRNA_E-siliculosus-1a_M_contig9.16991.1 vs. uniprot
Match: A0A7I4CUP6_PHYPA (Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4CUP6_PHYPA) HSP 1 Score: 229 bits (583), Expect = 2.840e-63 Identity = 182/556 (32.73%), Postives = 261/556 (46.94%), Query Frame = 2
Query: 203 KAAGWEFDHDVIVVGGGIVGCTLACRLAKDLSSTTPSTSGLPPLSTGKDDXXXXXXXXXXXXXXPAVGLIEARPPPSLEAALARGSPDPRVYSLAPSSVEILGKLGVWDDGGGVLKGRSQPFGGMQVWDDRGAGHLRFDGEGKEGKTAALGFISEHGVIHSSLFERVQELEADGLAELTCPAQARGMQVTFPPVGAGGATGPLKVTIETASGETSDTTCRLLVAADGGDSKARSRRFCQRGPKSCACTASVAKMMGLSSFGWGYGQRAVVATVKLAESHGEVAFQRYLSRGPLAMLPLPGGNLASLVWSTTPEHAESLKSMSPTEFVKEVNDALRLPPTIGTSPSSSAEPASFSGTVPPFAGDHGLFGGVSSLAALPFATASALGEGVAKSAEGVAGALAGLSLGLQEGAGGGGRGGFCTPPEAIEVVTPRLGFDLSLRQAHKYTGDRMALVGDAAHTVHPMAGQGLNLGIADADALARAVLEGRLSGTDVGSKTLLGRYEEERKTEALVMMGALDVLHRLFGSDARTVAAARSAGLSALNAAGPLKRRLARHAMG 1870
K AG E ++DV++VGGG+VG + C LA +P + L V +I++ P + + PD RV ++ P++V ++G W+ V PF MQVWD G G+ R+ + + LG++ E+ V+ +L R++ G + CPAQ + V P G P + E + RL+V ADGG S R+ TA G + GW Y Q AV+ TV++ +H AFQR+L GP A+LPL +++VW+TTPE A++LK+MS +FV E N AL P ++ A G V L G + A+ PF QE PP ++ TPRL F LSL A Y G R+ALVGDAAHTVHP+AGQG+NLG DA +L++ + +G +G D+G LL YE ERK L MM LD +++ SD + ARS G +A++A GPLK+++ +AMG
Sbjct: 37 KQAGSEDEYDVVIVGGGMVGAAVGCGLA-----CSPLSRDL------------------------RVAIIDSSKPMAAPKHDPKAVPDQRVSAITPATVRFFKEVGAWES---VQAAMPTPFDAMQVWDYEGLGYTRYTAD--DVGAYVLGYVVENKVLLGALRSRIENA---GSVDFICPAQVKS--VLLPTPSGQGLDSP-QDRAEVGLNDGRSLRARLVVGADGGRSAVRA-------------TA------GFQTRGWEYKQSAVICTVRVETNHA-TAFQRFLPTGPFALLPL-NDTYSNIVWTTTPEKADALKTMSAEQFVVEANKAL----IDDHGPKPGSKIAEIVGNV---VTSSPLLGAMGPSASEPF----------------------------QE------------PPRIVDCATPRLSFPLSLMHASNYVGHRVALVGDAAHTVHPLAGQGVNLGFGDAASLSKVLQKGVETGHDIGQIDLLEEYERERKRTNLTMMAILDGFQKMYSSDFGPLKYARSFGFNAVHALGPLKKQIISYAMG 484
BLAST of mRNA_E-siliculosus-1a_M_contig9.16991.1 vs. uniprot
Match: A0A662YAA9_9STRA (Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YAA9_9STRA) HSP 1 Score: 225 bits (573), Expect = 7.670e-62 Identity = 185/552 (33.51%), Postives = 265/552 (48.01%), Query Frame = 2
Query: 227 HDVIVVGGGIVGCTLACRLAKDLSSTTPSTSGLPPLSTGKDDXXXXXXXXXXXXXXPAVGLIEARPPPSLEAALARGSPDPRVYSLAPSSVEILGKLGVWDDGGGVLKGRSQPFGGMQVWDDRGAGHLRFDGEGKEGKTAALGFISEHGVIHSSLFERVQELEADG----LAELTCPAQARGMQVTFPPVGAGGATGPLKVTIETASGETSDTTCRLLVAADGGDSKARSRRFCQRGPKSCACTASVAKMMGLSSFGWGYGQRAVVATVKLAESHGEVAFQRYLSRGPLAMLPLPGGNLASLVWSTTPEHAESLKSMSPTEFVKEVNDALRLPPTIGTSPSSSAEPASFSGTVPPFAGDHGLFGGVSSLAALPFATASALGEGVAKSAEGVAGALAGLSLGLQEGAGGGGRGGFCTPPEAIEVVTPRLGFDLSLRQAHKYTGDRMALVGDAAHTVHPMAGQGLNLGIADADALARAVLEGRLSGTDVGSKTLLGRYEEERKTEALVMMGALDVLHRLFGSDARTVAAARSAGLSALNAAGPLKRRLARHAMG 1870
+DV+VVGGGIVG TLAC+L + P GK V +IE PP + + + SPD RV+++ +S ++L VWD + + F MQ WD G G +RFD + K GKT LG + EH V+ +L +R+ +L + +L CPA+ + +K E + L+VAADGG+S RS + L ++GW Y Q+AVVATVK + E A+QR+ GP+A+LP+ G +S+VWS T + A+ L S+SP EFV +NDA PP + VPP F G+ L L +GV +A + A+A F PP+A+ V R F L ++ A +Y MALVGD+AHT+HP+AGQGLNLG+ D AL+ ++EG SG ++ ++ L +YE+ERK + M A+D RLFG + AR+ G+ LNA PLK ++ R+AMG
Sbjct: 42 YDVVVVGGGIVGSTLACQLKSN------------PAFRGK-----------------RVAVIETAAPP-VAPPVEQDSPDLRVFTITHASQKLLESAKVWDL---MTSDQKAVFKDMQAWDAMGDGFIRFDAK-KVGKTT-LGHVLEHRVLVRALHDRMNQLSSSTDDSEPLKLYCPAKVKHFHRP----------NMIKAISEIGLEDGQRMEADLVVAADGGNSIIRS-------------------LSALGTWGWDYDQQAVVATVK-TDRVNETAWQRFFPTGPVALLPMRDG-YSSVVWSCTADMAKELTSLSPEEFVARLNDAFFAPP---------------NAPVPP------EFPGIPVLTDLV--------KGVHHAASTIMSAVALTDP-------------FVAPPKAVTTVGHRFAFPLKMKHATQYVKPGMALVGDSAHTIHPLAGQGLNLGLGDVQALSNLLVEGVKSGENLSNEYFLAQYEDERKKANISMALAMDGFKRLFGPTPDALGVARNVGMGTLNAVEPLKNQIMRYAMG 485
BLAST of mRNA_E-siliculosus-1a_M_contig9.16991.1 vs. uniprot
Match: A0A6H5KHF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHF3_9PHAE) HSP 1 Score: 211 bits (536), Expect = 5.250e-61 Identity = 119/123 (96.75%), Postives = 122/123 (99.19%), Query Frame = 2
Query: 215 WEFDHDVIVVGGGIVGCTLACRLAKDLSSTTPSTSGLPPLSTGKDDXXXXXXXXXXXXXXPAVGLIEARPPPSLEAALARGSPDPRVYSLAPSSVEILGKLGVWDDGGGVLKGRSQPFGGMQV 583
WE+DHDV+VVGGGIVGCTLACRLAKDLSSTTPSTSGLPPLSTGKD XXXXXXXXXXXXXXPAVGLIEARPPPSLEAALARGSPDPRVYSLAPSSVEILGKLGVWD+GGGVLKGRSQPFGGMQV
Sbjct: 3 WEYDHDVLVVGGGIVGCTLACRLAKDLSSTTPSTSGLPPLSTGKDXXXXXXXXXXXXXXXPAVGLIEARPPPSLEAALARGSPDPRVYSLAPSSVEILGKLGVWDEGGGVLKGRSQPFGGMQV 125
BLAST of mRNA_E-siliculosus-1a_M_contig9.16991.1 vs. uniprot
Match: A0A835YJF8_9CHLO (Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YJF8_9CHLO) HSP 1 Score: 218 bits (555), Expect = 3.120e-59 Identity = 189/560 (33.75%), Postives = 263/560 (46.96%), Query Frame = 2
Query: 227 HDVIVVGGGIVGCTLACRLAKDLSSTTPSTSGLPPLSTGKDDXXXXXXXXXXXXXXPAVGLIEARPPP-SLEAALARGSPDPRVYSLAPSSVEILGKLGVWDDGGGVLKGRSQPFGGMQVWDDRGAGHLRFDGE--GKEGKTAALGFISEHGVIHSSLFERVQELEADGLAELTCPAQARGMQVTF----PPVGAGGATGPLKVTIETASGETSDTTCRLLVAADGGDSKARSRRFCQRGPKSCACTASVAKMMGLSSFGWGYGQRAVVATVKLAESHGEVAFQRYLSRGPLAMLPLPGGNLASLVWSTTPEHAESLKSMSPTEFVKEVNDALRLPPTIGTSPSSSAEPASFSGTVPPFAGDHGLFGGVSSLAALPFATASALGEGVAKSAEGVAGALAGLSLGLQEGAGGGGRGG-FCTPPEAIEVV--TPRLGFDLSLRQAHKYTGDRMALVGDAAHTVHPMAGQGLNLGIADADALARAVLEGRLSGTDVGSKTLLGR-YEEERKTEALVMMGALDVLHRLFGSDARTVAAARSAGLSALNAAGPLKRRLARHAMGG 1873
+DV++VGGG+VG +A L + + V +++ +P P S A G RV ++ P S+ +L G W++ ++ S PF MQVWD GH+R+ G+E +G ++E+ ++ +SL Q + G E PA+ RG+++ P G L + A G T RL+VAADG S+ R +M GL ++GWGYGQR VVATV AE H AFQR+L GPLA+LP+ GG L+S+VWSTTPE A +L+++ P EF VN AL PP + AA FA S+L E +LG GAG + PP A+E+V +P+ F L L+QA ++ R+ALVGDAAH VHP+AGQG+NLG+ DA ALA A+ G+D G LLG YE R+ L M A+D + R F A AA R GL +NA GP++ + +AM G
Sbjct: 50 YDVVIVGGGMVGAAVAALLGGNRMTQQMR-----------------------------VAVLDVKPQPLSFTPAPVPGL---RVSTITPGSIGVLKAAGAWEE----VEALSAPFVDMQVWDAAAPGHIRWSARDLGEE----RMGVVAENPLLQASLLRAAQR--SGGRTEFLWPAELRGLRLPDEQGRPHPGCSHGLAELDL----ADGRT--LVARLVVAADGSASRVR-------------------QMAGLRTWGWGYGQRGVVATVSTAEPH-VTAFQRFLPTGPLALLPVRGG-LSSIVWSTTPEAAAALEALGPREFAAAVNKALLDPP---------------------------------ASAASGFAPVSSLAE----------------ALGRMVGAGAXXXXXXWREPPRAVELVGSSPK-SFPLQLKQAGRFVLPRLALVGDAAHAVHPLAGQGVNLGLGDAGALAEALRGAVAGGSDPGDARLLGEAYEAPRRRAVLAMTAAMDGVKRAFAVQAPPFAAVRGLGLGLINAVGPVRNGIMNYAMMG 490 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.16991.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig9.16991.1 >prot_E-siliculosus-1a_M_contig9.16991.1 ID=prot_E-siliculosus-1a_M_contig9.16991.1|Name=mRNA_E-siliculosus-1a_M_contig9.16991.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=596bp MLGSGMAWRHSRVAASRNMTRLRSHRAFSSAPAGLGDKAAGWEFDHDVIVback to top mRNA from alignment at E-siliculosus-1a_M_contig9:776819..785229+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig9.16991.1 ID=mRNA_E-siliculosus-1a_M_contig9.16991.1|Name=mRNA_E-siliculosus-1a_M_contig9.16991.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=8411bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:776819..785229+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig9:776819..785229+ >mRNA_E-siliculosus-1a_M_contig9.16991.1 ID=mRNA_E-siliculosus-1a_M_contig9.16991.1|Name=mRNA_E-siliculosus-1a_M_contig9.16991.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=3576bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:776819..785229+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |