mRNA_E-siliculosus-1a_M_contig9.16966.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.16966.1 vs. uniprot
Match: D7FZB4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZB4_ECTSI) HSP 1 Score: 360 bits (924), Expect = 2.660e-119 Identity = 185/190 (97.37%), Postives = 188/190 (98.95%), Query Frame = 1
Query: 1 MLRPAVSTLSGKSVAAAVSRSLFPGVCAAGDRLERSRTAGSGGVVGCRRGMMMAAKPGKIKKERSGKALDKKTMTLLKLLDARPEPMPELSAEEKQRNFDIGRRYNSKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKKDYGLSDDEDAEAELNRFRDGY 570
MLRPAVSTLSG+SVAAAVSR FPGVCAAGDRLERSRTAGSGGVVGCRRGMMMAAKPGKIKKERSGKALDKKTMTLLKLLDARPEPMPELSAEEKQRNFDIGRRYNSKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKKDYGLSDDEDA+A+LNRFRDGY
Sbjct: 1 MLRPAVSTLSGRSVAAAVSRRSFPGVCAAGDRLERSRTAGSGGVVGCRRGMMMAAKPGKIKKERSGKALDKKTMTLLKLLDARPEPMPELSAEEKQRNFDIGRRYNSKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKKDYGLSDDEDADAQLNRFRDGY 190
BLAST of mRNA_E-siliculosus-1a_M_contig9.16966.1 vs. uniprot
Match: A0A7S1DZY1_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DZY1_HEMAN) HSP 1 Score: 60.8 bits (146), Expect = 1.700e-7 Identity = 41/106 (38.68%), Postives = 56/106 (52.83%), Query Frame = 1
Query: 184 KERSGKALDKKTMTLLKLLDARPEPMPELSAEEKQRNFDIGRRYNSKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFD 501
K+ K LD K + K+L+AR E S E+ + +I + + + H E+ LT KI+LRD AIA LPE LQ + D PL+R + T PPI GFD
Sbjct: 18 KKGKSKGLDGKFLVHAKVLEARGEERYVRSEEQMGLDTEIAKEFARQSMKRHIEQQKWLTRKIRLRDQAIAALPEELQAEGKSMDEESFPLDRHIWTDFPPIKGFD 123
BLAST of mRNA_E-siliculosus-1a_M_contig9.16966.1 vs. uniprot
Match: A0A7S1SH10_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SH10_9CHLO) HSP 1 Score: 60.1 bits (144), Expect = 8.050e-7 Identity = 43/136 (31.62%), Postives = 69/136 (50.74%), Query Frame = 1
Query: 121 SGGVVGCRRGMMMAAKPGKIKK-ERSGKALDKKTMTLLKLLDARPEPMPELSAEEKQRNFDIGRRYNSKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKKDYGLSD 525
SGG G + K ++K E+ +L K ++K+L+ + P +LSA + + + G+ ++ K H L+ K++L+ AI LP L+ A D P PLNR VAT TPPI G+ + G++D
Sbjct: 40 SGGARGAKTETKAEKKAKAVQKDEQQSSSLGGKVQQMMKVLEPQKVPQAKLSAGDLEEHKQRGKEFSRKKMAEHRAWQKALSEKLRLKLAAIEALPVALREHAASDDFEPFPLNRWVATDTPPIEGYYESKSGVND 175
BLAST of mRNA_E-siliculosus-1a_M_contig9.16966.1 vs. uniprot
Match: A0A445ACG8_ARAHY (Uncharacterized protein n=3 Tax=Arachis TaxID=3817 RepID=A0A445ACG8_ARAHY) HSP 1 Score: 61.2 bits (147), Expect = 8.410e-7 Identity = 37/93 (39.78%), Postives = 55/93 (59.14%), Query Frame = 1
Query: 229 LKLLDARPEPMPELSAEEKQRNFDIGRRYNSKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKK 507
L L+D P EL+ E+ ++ + + Y+ + H ER A TT ++L+ +AI LPE L+ AA PD P P+NR +AT TPPI G+ +K
Sbjct: 138 LGLVDEEKIPKYELTVEDGRK---LAKEYSRVLMRKHRERQAKETTLLRLKKEAIEALPEGLREAALVPDLTPFPVNRFMATLTPPIEGYMEK 227
BLAST of mRNA_E-siliculosus-1a_M_contig9.16966.1 vs. uniprot
Match: A0A834YQV3_9MAGN (Uncharacterized protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834YQV3_9MAGN) HSP 1 Score: 61.2 bits (147), Expect = 9.290e-7 Identity = 38/93 (40.86%), Postives = 55/93 (59.14%), Query Frame = 1
Query: 229 LKLLDARPEPMPELSAEEKQRNFDIGRRYNSKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKK 507
L L+DA P EL+ E+ +R + + Y+ + H R A TT ++L+ +AI LPE L+ AA PD P P+NR +AT TPPI G+ +K
Sbjct: 146 LGLVDAEDVPKYELTVEDGRR---LAKEYSRALMRRHRARRAAETTLLRLKKEAIEALPENLKAAALVPDLTPFPVNRFMATLTPPIEGYIEK 235
BLAST of mRNA_E-siliculosus-1a_M_contig9.16966.1 vs. uniprot
Match: A0A7S2IRI2_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IRI2_9EUKA) HSP 1 Score: 58.5 bits (140), Expect = 1.580e-6 Identity = 32/65 (49.23%), Postives = 38/65 (58.46%), Query Frame = 1
Query: 313 YNSKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKK 507
Y+ H+ A LT I+LR+ AIA LPE LQH ARQPD P+ RR+ T T PIP F K
Sbjct: 80 YSRAKMHEHHRVNAHLTKMIRLREAAIAALPEALQHEARQPDYTTLPIQRRIFTETAPIPDFQLK 144
BLAST of mRNA_E-siliculosus-1a_M_contig9.16966.1 vs. uniprot
Match: A0A1S4BHU9_TOBAC (uncharacterized protein LOC107808434 n=12 Tax=Solanaceae TaxID=4070 RepID=A0A1S4BHU9_TOBAC) HSP 1 Score: 60.1 bits (144), Expect = 2.080e-6 Identity = 36/93 (38.71%), Postives = 55/93 (59.14%), Query Frame = 1
Query: 229 LKLLDARPEPMPELSAEEKQRNFDIGRRYNSKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKK 507
L L+D P E++ E+ +R + + Y+ + H +R A TT ++L+ +AI LPE L+ AA PD P P+NR +AT TPPI G+ +K
Sbjct: 139 LGLVDVEKLPKYEMTVEDGRR---LAKEYSRVLMRKHRQRQAAETTLLRLKKEAIEALPENLKAAALVPDLTPFPVNRFMATLTPPIEGYIEK 228
BLAST of mRNA_E-siliculosus-1a_M_contig9.16966.1 vs. uniprot
Match: A0A6T7YBG7_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A6T7YBG7_9CRYP) HSP 1 Score: 57.8 bits (138), Expect = 2.410e-6 Identity = 33/97 (34.02%), Postives = 54/97 (55.67%), Query Frame = 1
Query: 208 DKKTMTLLKLLDARPEPMPELSAEEKQRNFDIGRRYNSKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGF 498
D + L+K L+ + A++ + + I + + + N+ +A++ KI+LRD A+A LP LQ R D P P++R +AT+TPPIPGF
Sbjct: 38 DSRFKLLIKALEQKGPKKYVRDAKQMEIDQQIAKEFTRQSFRRENKFLANMQQKIRLRDIAVAALPAELQAEGRTNDMEPYPMDRHMATHTPPIPGF 134
BLAST of mRNA_E-siliculosus-1a_M_contig9.16966.1 vs. uniprot
Match: A0A1U8DSZ5_CAPAN (uncharacterized protein LOC107839242 n=4 Tax=Capsicum TaxID=4071 RepID=A0A1U8DSZ5_CAPAN) HSP 1 Score: 59.7 bits (143), Expect = 2.700e-6 Identity = 36/90 (40.00%), Postives = 53/90 (58.89%), Query Frame = 1
Query: 229 LKLLDARPEPMPELSAEEKQRNFDIGRRYNSKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGF 498
L L+D P EL+ E+ +R + + Y+ + H +R A TT ++L+ +AI LPE L+ AA PD P P+NR +AT TPPI G+
Sbjct: 136 LGLVDVEKLPKYELTVEDGRR---LAKAYSRVLMRKHRQRQAAETTLLRLKKEAIEALPENLKTAALVPDYTPFPVNRFMATLTPPIEGY 222
BLAST of mRNA_E-siliculosus-1a_M_contig9.16966.1 vs. uniprot
Match: UPI001CFB45A2 (uncharacterized protein LOC123217938 n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CFB45A2) HSP 1 Score: 59.3 bits (142), Expect = 3.540e-6 Identity = 37/93 (39.78%), Postives = 55/93 (59.14%), Query Frame = 1
Query: 229 LKLLDARPEPMPELSAEEKQRNFDIGRRYNSKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKK 507
L L+DA P EL+ E+ +R + + Y+ + H R A +T ++L+ +AI LPE L+ AA PD P P+NR +AT TPPI G+ +K
Sbjct: 134 LGLVDAEKIPKYELTVEDGRR---LAKEYSRVLMRRHRARQAAESTLLRLKKEAIEALPEGLKEAALVPDLTPFPVNRFMATLTPPIEGYLEK 223 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.16966.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig9.16966.1 >prot_E-siliculosus-1a_M_contig9.16966.1 ID=prot_E-siliculosus-1a_M_contig9.16966.1|Name=mRNA_E-siliculosus-1a_M_contig9.16966.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=191bp MLRPAVSTLSGKSVAAAVSRSLFPGVCAAGDRLERSRTAGSGGVVGCRRGback to top mRNA from alignment at E-siliculosus-1a_M_contig9:474897..477672+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig9.16966.1 ID=mRNA_E-siliculosus-1a_M_contig9.16966.1|Name=mRNA_E-siliculosus-1a_M_contig9.16966.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2776bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:474897..477672+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig9:474897..477672+ >mRNA_E-siliculosus-1a_M_contig9.16966.1 ID=mRNA_E-siliculosus-1a_M_contig9.16966.1|Name=mRNA_E-siliculosus-1a_M_contig9.16966.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1146bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:474897..477672+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |