mRNA_E-siliculosus-1a_M_contig9.16962.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.16962.1 vs. uniprot
Match: D7FZB7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZB7_ECTSI) HSP 1 Score: 466 bits (1200), Expect = 1.220e-161 Identity = 215/222 (96.85%), Postives = 217/222 (97.75%), Query Frame = 1
Query: 1 QACCLICVKDDPVPGSKLDAYYGNPNQFQIGMMEAPCKNCLWCAYGSLCLGCAQFAVRKRALGGRLDDYVCCQGYFPSHCCEPGDCGERRCPCFCLCMESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNCLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMTGQMMAEMEYQEGTSPEAQFITGREYGAMLDRGINSKEAMEERRGY 666
ACCLICVKDDPVPGSKLDAYYGNPNQFQIGMMEAPCK LWCAYGSLCLGCAQFAVRKRALGGRLDDYVCCQGYFP+HCCEPGDCGERRCPCFCLCMESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNCLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMTGQMMAEMEYQEGTSPEAQ ITGREYGAMLDRGINSKEAM+E RGY
Sbjct: 1 MACCLICVKDDPVPGSKLDAYYGNPNQFQIGMMEAPCKTFLWCAYGSLCLGCAQFAVRKRALGGRLDDYVCCQGYFPTHCCEPGDCGERRCPCFCLCMESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNCLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMTGQMMAEMEYQEGTSPEAQCITGREYGAMLDRGINSKEAMDEGRGY 222
BLAST of mRNA_E-siliculosus-1a_M_contig9.16962.1 vs. uniprot
Match: D7FZB6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZB6_ECTSI) HSP 1 Score: 325 bits (833), Expect = 2.000e-106 Identity = 145/200 (72.50%), Postives = 167/200 (83.50%), Query Frame = 1
Query: 1 QACCLICVKDDPVPGSKLDAYYGNPNQFQIGMMEAPCKNCLWCAYGSLCLGCAQFAVRKRALGGRLDDYVCCQGYFPSHCCEPGDCGERRCPCFCLCMESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNCLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMTGQMMAEMEYQEGTSPEAQFITGR 600
ACCLICVKDDPVPGSKLD +YGNPNQFQIG+MEAPCKNC W +G LC CAQF VRKRAL G L++Y+CCQGY+P C GDCGER CPCFCLC+ESF C SCAVSSSRMYLMDKF V PDPWDNRIIRFNN LQLLSCIC+ AAI +++ RELAR+ D++A+LVY++ VGCMTGQM+ EM+YQ +P+AQ I GR
Sbjct: 1 MACCLICVKDDPVPGSKLDPFYGNPNQFQIGLMEAPCKNCPWFCFGCLCTCCAQFIVRKRALDGNLENYLCCQGYYPMCCMSAGDCGERSCPCFCLCLESFCCNSCAVSSSRMYLMDKFSVMPDPWDNRIIRFNNFLQLLSCICNIAAICIEEIRELARIIDLIADLVYMTTVGCMTGQMIYEMDYQASVAPKAQAIAGR 200
BLAST of mRNA_E-siliculosus-1a_M_contig9.16962.1 vs. uniprot
Match: D7FZB5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZB5_ECTSI) HSP 1 Score: 311 bits (797), Expect = 3.280e-101 Identity = 141/182 (77.47%), Postives = 155/182 (85.16%), Query Frame = 1
Query: 1 QACCLICVKDDPVPGSKLDAYYGNPNQFQIGMMEAPCKNCLWCAYGSLCLGCAQFAVRKRALGGRLDDYVCCQGYFPSHCCEPGDCGERRCPCFCLCMESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNCLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMTGQMMA 546
ACCLICV D+PVPGSKLDAYY NPN+FQIGMMEAPCKNC WC +G LC+ CAQF VRKRAL G L +YVCCQGYFP C EPGDCGER CPCFCLCMESF C SCAVSSSRMYLMDKF VQPDPWDNRIIRFNN LQ+LSCICH AAI V++ RELAR+ D++A+LVY++ VGCMT MA
Sbjct: 1 MACCLICVNDEPVPGSKLDAYYENPNKFQIGMMEAPCKNCPWCTFGCLCMCCAQFIVRKRALDGNLANYVCCQGYFPMCCFEPGDCGERDCPCFCLCMESFACTSCAVSSSRMYLMDKFGVQPDPWDNRIIRFNNALQVLSCICHIAAICVREVRELARIIDLIADLVYMTTVGCMTVAGMA 182
BLAST of mRNA_E-siliculosus-1a_M_contig9.16962.1 vs. uniprot
Match: A0A835YWZ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWZ0_9STRA) HSP 1 Score: 288 bits (736), Expect = 8.020e-92 Identity = 129/198 (65.15%), Postives = 157/198 (79.29%), Query Frame = 1
Query: 1 QACCLICVKDDPVPGSKLDAYYGNPNQFQIGMMEAPCKNCLWCAYGSLCLGCAQFAVRKRALGGRLDDYVCCQGYFPSHCC-EPGDCGERRCPCFCLCMESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNCLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMTGQMMAEMEYQEGTSPEAQFI 591
ACCLIC D+PV GSKL+ +YGN QFQIGMMEAPCK L C YGSLC CAQ+ VRKRAL G LD+Y+CCQGYFP CC +PG CGE+ P CLC+ESF C SCAVSSSRM++MDK+ + PDPWDNRIIRFNN LQLLSCIC+C AI V++ RE AR+ D++A +V+ + VGCMTGQMM E++YQ+ +P+A+ I
Sbjct: 1 MACCLICFSDEPVRGSKLEQFYGNNQQFQIGMMEAPCKATLCCCYGSLCSCCAQYTVRKRALDGNLDNYICCQGYFPGCCCMKPGHCGEKSSPACCLCLESFCCLSCAVSSSRMFIMDKYRLLPDPWDNRIIRFNNALQLLSCICNCLAICVEELREFARILDLIAEIVFYTTVGCMTGQMMHELDYQQNMAPKAEAI 198
BLAST of mRNA_E-siliculosus-1a_M_contig9.16962.1 vs. uniprot
Match: A0A7S2UXX8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXX8_9STRA) HSP 1 Score: 194 bits (492), Expect = 3.700e-55 Identity = 90/185 (48.65%), Postives = 116/185 (62.70%), Query Frame = 1
Query: 10 CLICVKDDPVPGSKLDAYYGNPNQFQIGMMEAPCKNCLWCAYGSLCLGCAQFAVRKRALGGRLDDYVCCQGYFPSHCCEPGDCGERRCPCFCLCMESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNCLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMTGQMMAEMEYQE 564
C IC D P+ G K + N FQ+ M + PC+ C C CAQ+ VRK+AL G + +Y CCQGY+ C + G CGE CP CLC+E+ C SCAVSS+RM +MD + +Q DPWD RIIRFNNC+Q+LSCICH AAI R+ A L D +A+ VY S CMT Q+ E++YQ+
Sbjct: 3 CCICFDDGPIEGDKYGQF---SNTFQLSMADVPCQQPACCLGAFFCCPCAQYMVRKKALDGDMTNYKCCQGYYDCLCFKAGHCGEESCPDVCLCLEAVFCNSCAVSSTRMLVMDTYFLQSDPWDRRIIRFNNCMQMLSCICHIAAIIDPSLRDCAVLIDRIADCVYYSVQACMTAQVNFELDYQK 184
BLAST of mRNA_E-siliculosus-1a_M_contig9.16962.1 vs. uniprot
Match: A0A6V1R716_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1R716_HETAK) HSP 1 Score: 189 bits (480), Expect = 2.020e-53 Identity = 86/191 (45.03%), Postives = 121/191 (63.35%), Query Frame = 1
Query: 1 QACCLICVKDDPVPGSKLDAYYGNPNQFQIGMMEAPCKNCLWCAYGSLCLGCAQFAVRKRALGGRLDDYVCCQGYFPSHCCEPGDCGERRCPCFCLCMESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNCLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMTGQMMAEMEYQEGTS 573
AC L C D+P+ G D Y PN F IGM++AP + L C YG + CA + +R++AL G L +Y CCQGY+ C+ G CGE +CP CLC+E++ C SC++S++RM++MD + +Q DP D R+IRFNN LQ LSCICH A F ++ R+LA +VY S GCM Q+ E+E+++ S
Sbjct: 1 MACLLFCFSDEPIEG---DERYDRPNMFNIGMIDAPTREPLCCLYGCIFPCCAFYQLREKALDGDLSNYRCCQGYYDRGPCKSGSCGEEQCPALCLCIEAWWCSSCSISATRMFVMDNYFLQSDPMDRRLIRFNNALQCLSCICHVLAAFDRNLRDLAXXXXXXXXIVYYSTAGCMNAQVNHELEFRKAPS 188
BLAST of mRNA_E-siliculosus-1a_M_contig9.16962.1 vs. uniprot
Match: A0A2R5GIB4_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIB4_9STRA) HSP 1 Score: 182 bits (462), Expect = 1.920e-50 Identity = 88/200 (44.00%), Postives = 127/200 (63.50%), Query Frame = 1
Query: 4 ACCLICVKDDPVPGSKLDAYYGNPNQFQIGMMEAPCKNCLWCAYGSLCLGCAQFAVRKRALGGRLDDYVCCQGYFPSHCCEPGDCGERRCPCFCLCMESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNCLQLLSCICHCAAIFVQD-----FRELARLTDVLANLVYLSAVGCMTGQMMAEMEYQE--GTSPEA 582
ACC C DDPV D + N++++ M +AP + LWC YG+ C CA + +R RALG +++Y CCQGY C PG+ GE CP FCLCME C SC++S++R +MD++ + DP DNRIIRFNN +Q+LSC+ + +I +++ FRE A++ D++A +VY+ GCM QM +EME++E G P A
Sbjct: 6 ACCF-CFPDDPVED---DPRIQHANRWKVLMKDAPTEETLWCCYGAFCPVCAAYQLRTRALGYNMNNYRCCQGYLQFCCISPGNMGEENCPEFCLCMEVCCCLSCSISATRFMIMDQYSIVSDPCDNRIIRFNNFMQILSCVLNLLSICIEELYVRIFREAAQIVDLIAKIVYMVTFGCMAAQMKSEMEFREKQGQGPNA 201
BLAST of mRNA_E-siliculosus-1a_M_contig9.16962.1 vs. uniprot
Match: A0A7S2UXW4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXW4_9STRA) HSP 1 Score: 181 bits (460), Expect = 2.330e-50 Identity = 83/187 (44.39%), Postives = 113/187 (60.43%), Query Frame = 1
Query: 1 QACCLICVKDDPVPGSKLDAYYGNPNQFQIGMMEAPCKNCLWCAYGSLCLGCAQFAVRKRALGGRLDDYVCCQGYFPSHCCEPGDCGERRCPCFCLCMESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNCLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMTGQMMAEMEYQ 561
CCL+C DDP+ G K Y NPN FQ+ + +A C C C CAQ+ +RK+AL + +Y CCQGY+ C + G+ GE CP CLC+E++ C SCAVSS+RM +MD + + DPWD RIIRFNN Q+LSC+C A+ ++ A L ++A VY S CMT Q+ E++YQ
Sbjct: 1 MVCCLLCFSDDPIEGDK---YGQNPNTFQVSLKDAACAEPACCIGTFFCPCCAQYYIRKKALNDDMSNYTCCQGYYDCACFKAGNLGESSCPELCLCLEAYCCESCAVSSTRMLVMDTYMLASDPWDRRIIRFNNFCQVLSCVCQILAMVEPSLQDCAELIRLIAECVYYSVQACMTSQVHHELKYQ 184
BLAST of mRNA_E-siliculosus-1a_M_contig9.16962.1 vs. uniprot
Match: A0A484EEY5_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EEY5_BRELC) HSP 1 Score: 177 bits (450), Expect = 2.460e-49 Identity = 85/187 (45.45%), Postives = 113/187 (60.43%), Query Frame = 1
Query: 10 CLICVKDDPVPGSKLDAYYGNPNQFQIGMMEAPCKNCLWCAYGSLCLGCAQFAVRKRALGGRLDDYVCCQGYFPS--HCCEPGDCGERRCPCFCLCMESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNCLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMTGQMMAEMEYQE 564
C++C DPV D NP FQ+GMM AP + L C LC CAQ +R++AL + +Y CCQGY C G CGE CP FCLC+ESF C CAVS++RM +MD++ +QPD WDNRIIR NNC+QL+SC+C +I + + +LA L +A Y + GCMT Q+ E+ +E
Sbjct: 2 CILC-SGDPVED---DVRKNNPGSFQVGMMHAPGADPLCCMSACLCPCCAQIVIRRKALNYDMSNYTCCQGYMDGLVPCARSGQCGESSCPNFCLCLESFCCNGCAVSATRMLVMDRYRLQPDKWDNRIIRCNNCIQLVSCVCSLLSICISELGDLADLMYCIAQCTYATTQGCMTAQVNVELRERE 184
BLAST of mRNA_E-siliculosus-1a_M_contig9.16962.1 vs. uniprot
Match: A0A024G979_9STRA (Uncharacterized protein n=3 Tax=Albugo candida TaxID=65357 RepID=A0A024G979_9STRA) HSP 1 Score: 171 bits (434), Expect = 5.330e-47 Identity = 81/184 (44.02%), Postives = 109/184 (59.24%), Query Frame = 1
Query: 10 CLICVKDDPVPGSKLDAYYGNPNQFQIGMMEAPCKNCLWCAYGSLCLGCAQFAVRKRALGGRLDDYVCCQGYFPS--HCCEPGDCGERRCPCFCLCMESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNCLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMTGQMMAEME 555
C++C PV G D N N+F +GMM APC + C C CAQ+ +R++AL + YVC QGY C G CGER CP CLC+ES+LC CAVS++RM +MD++ ++PD WDNRIIR NNC+QLLSC+C C AI + + A Y++ GCMT Q+ E++
Sbjct: 2 CILC-SGSPVDG---DVRGQNSNEFMVGMMSAPCSSPCCCLASCFCPCCAQYIIRRKALDNDMSKYVCFQGYLDGVIPCLRSGQCGERSCPHCCLCLESWLCNGCAVSATRMLVMDRYNLRPDKWDNRIIRCNNCIQLLSCVCSCLAICISELGNXXXXXXXXAQCTYMTTQGCMTAQVNVELK 181 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.16962.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig9.16962.1 >prot_E-siliculosus-1a_M_contig9.16962.1 ID=prot_E-siliculosus-1a_M_contig9.16962.1|Name=mRNA_E-siliculosus-1a_M_contig9.16962.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=192bp MMEAPCKNCLWCAYGSLCLGCAQFAVRKRALGGRLDDYVCCQGYFPSHCCback to top mRNA from alignment at E-siliculosus-1a_M_contig9:437813..441415+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig9.16962.1 ID=mRNA_E-siliculosus-1a_M_contig9.16962.1|Name=mRNA_E-siliculosus-1a_M_contig9.16962.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=3603bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:437813..441415+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig9:437813..441415+ >mRNA_E-siliculosus-1a_M_contig9.16962.1 ID=mRNA_E-siliculosus-1a_M_contig9.16962.1|Name=mRNA_E-siliculosus-1a_M_contig9.16962.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1152bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:437813..441415+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |