mRNA_E-siliculosus-1a_M_contig9.16962.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.16962.1
Unique NamemRNA_E-siliculosus-1a_M_contig9.16962.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.16962.1 vs. uniprot
Match: D7FZB7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZB7_ECTSI)

HSP 1 Score: 466 bits (1200), Expect = 1.220e-161
Identity = 215/222 (96.85%), Postives = 217/222 (97.75%), Query Frame = 1
Query:    1 QACCLICVKDDPVPGSKLDAYYGNPNQFQIGMMEAPCKNCLWCAYGSLCLGCAQFAVRKRALGGRLDDYVCCQGYFPSHCCEPGDCGERRCPCFCLCMESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNCLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMTGQMMAEMEYQEGTSPEAQFITGREYGAMLDRGINSKEAMEERRGY 666
             ACCLICVKDDPVPGSKLDAYYGNPNQFQIGMMEAPCK  LWCAYGSLCLGCAQFAVRKRALGGRLDDYVCCQGYFP+HCCEPGDCGERRCPCFCLCMESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNCLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMTGQMMAEMEYQEGTSPEAQ ITGREYGAMLDRGINSKEAM+E RGY
Sbjct:    1 MACCLICVKDDPVPGSKLDAYYGNPNQFQIGMMEAPCKTFLWCAYGSLCLGCAQFAVRKRALGGRLDDYVCCQGYFPTHCCEPGDCGERRCPCFCLCMESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNCLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMTGQMMAEMEYQEGTSPEAQCITGREYGAMLDRGINSKEAMDEGRGY 222          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16962.1 vs. uniprot
Match: D7FZB6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZB6_ECTSI)

HSP 1 Score: 325 bits (833), Expect = 2.000e-106
Identity = 145/200 (72.50%), Postives = 167/200 (83.50%), Query Frame = 1
Query:    1 QACCLICVKDDPVPGSKLDAYYGNPNQFQIGMMEAPCKNCLWCAYGSLCLGCAQFAVRKRALGGRLDDYVCCQGYFPSHCCEPGDCGERRCPCFCLCMESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNCLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMTGQMMAEMEYQEGTSPEAQFITGR 600
             ACCLICVKDDPVPGSKLD +YGNPNQFQIG+MEAPCKNC W  +G LC  CAQF VRKRAL G L++Y+CCQGY+P  C   GDCGER CPCFCLC+ESF C SCAVSSSRMYLMDKF V PDPWDNRIIRFNN LQLLSCIC+ AAI +++ RELAR+ D++A+LVY++ VGCMTGQM+ EM+YQ   +P+AQ I GR
Sbjct:    1 MACCLICVKDDPVPGSKLDPFYGNPNQFQIGLMEAPCKNCPWFCFGCLCTCCAQFIVRKRALDGNLENYLCCQGYYPMCCMSAGDCGERSCPCFCLCLESFCCNSCAVSSSRMYLMDKFSVMPDPWDNRIIRFNNFLQLLSCICNIAAICIEEIRELARIIDLIADLVYMTTVGCMTGQMIYEMDYQASVAPKAQAIAGR 200          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16962.1 vs. uniprot
Match: D7FZB5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZB5_ECTSI)

HSP 1 Score: 311 bits (797), Expect = 3.280e-101
Identity = 141/182 (77.47%), Postives = 155/182 (85.16%), Query Frame = 1
Query:    1 QACCLICVKDDPVPGSKLDAYYGNPNQFQIGMMEAPCKNCLWCAYGSLCLGCAQFAVRKRALGGRLDDYVCCQGYFPSHCCEPGDCGERRCPCFCLCMESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNCLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMTGQMMA 546
             ACCLICV D+PVPGSKLDAYY NPN+FQIGMMEAPCKNC WC +G LC+ CAQF VRKRAL G L +YVCCQGYFP  C EPGDCGER CPCFCLCMESF C SCAVSSSRMYLMDKF VQPDPWDNRIIRFNN LQ+LSCICH AAI V++ RELAR+ D++A+LVY++ VGCMT   MA
Sbjct:    1 MACCLICVNDEPVPGSKLDAYYENPNKFQIGMMEAPCKNCPWCTFGCLCMCCAQFIVRKRALDGNLANYVCCQGYFPMCCFEPGDCGERDCPCFCLCMESFACTSCAVSSSRMYLMDKFGVQPDPWDNRIIRFNNALQVLSCICHIAAICVREVRELARIIDLIADLVYMTTVGCMTVAGMA 182          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16962.1 vs. uniprot
Match: A0A835YWZ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWZ0_9STRA)

HSP 1 Score: 288 bits (736), Expect = 8.020e-92
Identity = 129/198 (65.15%), Postives = 157/198 (79.29%), Query Frame = 1
Query:    1 QACCLICVKDDPVPGSKLDAYYGNPNQFQIGMMEAPCKNCLWCAYGSLCLGCAQFAVRKRALGGRLDDYVCCQGYFPSHCC-EPGDCGERRCPCFCLCMESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNCLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMTGQMMAEMEYQEGTSPEAQFI 591
             ACCLIC  D+PV GSKL+ +YGN  QFQIGMMEAPCK  L C YGSLC  CAQ+ VRKRAL G LD+Y+CCQGYFP  CC +PG CGE+  P  CLC+ESF C SCAVSSSRM++MDK+ + PDPWDNRIIRFNN LQLLSCIC+C AI V++ RE AR+ D++A +V+ + VGCMTGQMM E++YQ+  +P+A+ I
Sbjct:    1 MACCLICFSDEPVRGSKLEQFYGNNQQFQIGMMEAPCKATLCCCYGSLCSCCAQYTVRKRALDGNLDNYICCQGYFPGCCCMKPGHCGEKSSPACCLCLESFCCLSCAVSSSRMFIMDKYRLLPDPWDNRIIRFNNALQLLSCICNCLAICVEELREFARILDLIAEIVFYTTVGCMTGQMMHELDYQQNMAPKAEAI 198          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16962.1 vs. uniprot
Match: A0A7S2UXX8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXX8_9STRA)

HSP 1 Score: 194 bits (492), Expect = 3.700e-55
Identity = 90/185 (48.65%), Postives = 116/185 (62.70%), Query Frame = 1
Query:   10 CLICVKDDPVPGSKLDAYYGNPNQFQIGMMEAPCKNCLWCAYGSLCLGCAQFAVRKRALGGRLDDYVCCQGYFPSHCCEPGDCGERRCPCFCLCMESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNCLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMTGQMMAEMEYQE 564
            C IC  D P+ G K   +    N FQ+ M + PC+    C     C  CAQ+ VRK+AL G + +Y CCQGY+   C + G CGE  CP  CLC+E+  C SCAVSS+RM +MD + +Q DPWD RIIRFNNC+Q+LSCICH AAI     R+ A L D +A+ VY S   CMT Q+  E++YQ+
Sbjct:    3 CCICFDDGPIEGDKYGQF---SNTFQLSMADVPCQQPACCLGAFFCCPCAQYMVRKKALDGDMTNYKCCQGYYDCLCFKAGHCGEESCPDVCLCLEAVFCNSCAVSSTRMLVMDTYFLQSDPWDRRIIRFNNCMQMLSCICHIAAIIDPSLRDCAVLIDRIADCVYYSVQACMTAQVNFELDYQK 184          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16962.1 vs. uniprot
Match: A0A6V1R716_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1R716_HETAK)

HSP 1 Score: 189 bits (480), Expect = 2.020e-53
Identity = 86/191 (45.03%), Postives = 121/191 (63.35%), Query Frame = 1
Query:    1 QACCLICVKDDPVPGSKLDAYYGNPNQFQIGMMEAPCKNCLWCAYGSLCLGCAQFAVRKRALGGRLDDYVCCQGYFPSHCCEPGDCGERRCPCFCLCMESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNCLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMTGQMMAEMEYQEGTS 573
             AC L C  D+P+ G   D  Y  PN F IGM++AP +  L C YG +   CA + +R++AL G L +Y CCQGY+    C+ G CGE +CP  CLC+E++ C SC++S++RM++MD + +Q DP D R+IRFNN LQ LSCICH  A F ++ R+LA        +VY S  GCM  Q+  E+E+++  S
Sbjct:    1 MACLLFCFSDEPIEG---DERYDRPNMFNIGMIDAPTREPLCCLYGCIFPCCAFYQLREKALDGDLSNYRCCQGYYDRGPCKSGSCGEEQCPALCLCIEAWWCSSCSISATRMFVMDNYFLQSDPMDRRLIRFNNALQCLSCICHVLAAFDRNLRDLAXXXXXXXXIVYYSTAGCMNAQVNHELEFRKAPS 188          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16962.1 vs. uniprot
Match: A0A2R5GIB4_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIB4_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.920e-50
Identity = 88/200 (44.00%), Postives = 127/200 (63.50%), Query Frame = 1
Query:    4 ACCLICVKDDPVPGSKLDAYYGNPNQFQIGMMEAPCKNCLWCAYGSLCLGCAQFAVRKRALGGRLDDYVCCQGYFPSHCCEPGDCGERRCPCFCLCMESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNCLQLLSCICHCAAIFVQD-----FRELARLTDVLANLVYLSAVGCMTGQMMAEMEYQE--GTSPEA 582
            ACC  C  DDPV     D    + N++++ M +AP +  LWC YG+ C  CA + +R RALG  +++Y CCQGY    C  PG+ GE  CP FCLCME   C SC++S++R  +MD++ +  DP DNRIIRFNN +Q+LSC+ +  +I +++     FRE A++ D++A +VY+   GCM  QM +EME++E  G  P A
Sbjct:    6 ACCF-CFPDDPVED---DPRIQHANRWKVLMKDAPTEETLWCCYGAFCPVCAAYQLRTRALGYNMNNYRCCQGYLQFCCISPGNMGEENCPEFCLCMEVCCCLSCSISATRFMIMDQYSIVSDPCDNRIIRFNNFMQILSCVLNLLSICIEELYVRIFREAAQIVDLIAKIVYMVTFGCMAAQMKSEMEFREKQGQGPNA 201          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16962.1 vs. uniprot
Match: A0A7S2UXW4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXW4_9STRA)

HSP 1 Score: 181 bits (460), Expect = 2.330e-50
Identity = 83/187 (44.39%), Postives = 113/187 (60.43%), Query Frame = 1
Query:    1 QACCLICVKDDPVPGSKLDAYYGNPNQFQIGMMEAPCKNCLWCAYGSLCLGCAQFAVRKRALGGRLDDYVCCQGYFPSHCCEPGDCGERRCPCFCLCMESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNCLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMTGQMMAEMEYQ 561
              CCL+C  DDP+ G K   Y  NPN FQ+ + +A C     C     C  CAQ+ +RK+AL   + +Y CCQGY+   C + G+ GE  CP  CLC+E++ C SCAVSS+RM +MD + +  DPWD RIIRFNN  Q+LSC+C   A+     ++ A L  ++A  VY S   CMT Q+  E++YQ
Sbjct:    1 MVCCLLCFSDDPIEGDK---YGQNPNTFQVSLKDAACAEPACCIGTFFCPCCAQYYIRKKALNDDMSNYTCCQGYYDCACFKAGNLGESSCPELCLCLEAYCCESCAVSSTRMLVMDTYMLASDPWDRRIIRFNNFCQVLSCVCQILAMVEPSLQDCAELIRLIAECVYYSVQACMTSQVHHELKYQ 184          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16962.1 vs. uniprot
Match: A0A484EEY5_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EEY5_BRELC)

HSP 1 Score: 177 bits (450), Expect = 2.460e-49
Identity = 85/187 (45.45%), Postives = 113/187 (60.43%), Query Frame = 1
Query:   10 CLICVKDDPVPGSKLDAYYGNPNQFQIGMMEAPCKNCLWCAYGSLCLGCAQFAVRKRALGGRLDDYVCCQGYFPS--HCCEPGDCGERRCPCFCLCMESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNCLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMTGQMMAEMEYQE 564
            C++C   DPV     D    NP  FQ+GMM AP  + L C    LC  CAQ  +R++AL   + +Y CCQGY      C   G CGE  CP FCLC+ESF C  CAVS++RM +MD++ +QPD WDNRIIR NNC+QL+SC+C   +I + +  +LA L   +A   Y +  GCMT Q+  E+  +E
Sbjct:    2 CILC-SGDPVED---DVRKNNPGSFQVGMMHAPGADPLCCMSACLCPCCAQIVIRRKALNYDMSNYTCCQGYMDGLVPCARSGQCGESSCPNFCLCLESFCCNGCAVSATRMLVMDRYRLQPDKWDNRIIRCNNCIQLVSCVCSLLSICISELGDLADLMYCIAQCTYATTQGCMTAQVNVELRERE 184          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16962.1 vs. uniprot
Match: A0A024G979_9STRA (Uncharacterized protein n=3 Tax=Albugo candida TaxID=65357 RepID=A0A024G979_9STRA)

HSP 1 Score: 171 bits (434), Expect = 5.330e-47
Identity = 81/184 (44.02%), Postives = 109/184 (59.24%), Query Frame = 1
Query:   10 CLICVKDDPVPGSKLDAYYGNPNQFQIGMMEAPCKNCLWCAYGSLCLGCAQFAVRKRALGGRLDDYVCCQGYFPS--HCCEPGDCGERRCPCFCLCMESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRIIRFNNCLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMTGQMMAEME 555
            C++C    PV G   D    N N+F +GMM APC +   C     C  CAQ+ +R++AL   +  YVC QGY      C   G CGER CP  CLC+ES+LC  CAVS++RM +MD++ ++PD WDNRIIR NNC+QLLSC+C C AI + +           A   Y++  GCMT Q+  E++
Sbjct:    2 CILC-SGSPVDG---DVRGQNSNEFMVGMMSAPCSSPCCCLASCFCPCCAQYIIRRKALDNDMSKYVCFQGYLDGVIPCLRSGQCGERSCPHCCLCLESWLCNGCAVSATRMLVMDRYNLRPDKWDNRIIRCNNCIQLLSCVCSCLAICISELGNXXXXXXXXAQCTYMTTQGCMTAQVNVELK 181          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.16962.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZB7_ECTSI1.220e-16196.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZB6_ECTSI2.000e-10672.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FZB5_ECTSI3.280e-10177.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YWZ0_9STRA8.020e-9265.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2UXX8_9STRA3.700e-5548.65Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V1R716_HETAK2.020e-5345.03Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2R5GIB4_9STRA1.920e-5044.00Uncharacterized protein n=1 Tax=Hondaea fermentalg... [more]
A0A7S2UXW4_9STRA2.330e-5044.39Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A484EEY5_BRELC2.460e-4945.45Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A024G979_9STRA5.330e-4744.02Uncharacterized protein n=3 Tax=Albugo candida Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:437813..441415 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size576
Model size1568
Exons6
Ec32 orthologEc-07_001640.1
Ec32 ortholog descriptionconserved unknown protein
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelPeronosporales
EggNOG OGs2BWTM@1,2S2DX@2759,3QDY9@4776
Seed eggNOG ortholog67593.Physo134533
Seed ortholog evalue2.3e-35
Seed ortholog score155.6
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.16962.1prot_E-siliculosus-1a_M_contig9.16962.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig9 437906..440516 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936380.413583-UTR-E-siliculosus-1a_M_contig9:437812..4379051622936380.413583-UTR-E-siliculosus-1a_M_contig9:437812..437905Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig9 437813..437905 +
1696251051.8051276-UTR-E-siliculosus-1a_M_contig9:437812..4379051696251051.8051276-UTR-E-siliculosus-1a_M_contig9:437812..437905Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig9 437813..437905 +
1622936380.5249681-UTR-E-siliculosus-1a_M_contig9:440516..4414151622936380.5249681-UTR-E-siliculosus-1a_M_contig9:440516..441415Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig9 440517..441415 +
1696251051.8760095-UTR-E-siliculosus-1a_M_contig9:440516..4414151696251051.8760095-UTR-E-siliculosus-1a_M_contig9:440516..441415Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig9 440517..441415 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936380.4288-CDS-E-siliculosus-1a_M_contig9:437905..4379361622936380.4288-CDS-E-siliculosus-1a_M_contig9:437905..437936Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 437906..437936 +
1696251051.8153336-CDS-E-siliculosus-1a_M_contig9:437905..4379361696251051.8153336-CDS-E-siliculosus-1a_M_contig9:437905..437936Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 437906..437936 +
1622936380.4435172-CDS-E-siliculosus-1a_M_contig9:438172..4382801622936380.4435172-CDS-E-siliculosus-1a_M_contig9:438172..438280Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 438173..438280 +
1696251051.824741-CDS-E-siliculosus-1a_M_contig9:438172..4382801696251051.824741-CDS-E-siliculosus-1a_M_contig9:438172..438280Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 438173..438280 +
1622936380.4631636-CDS-E-siliculosus-1a_M_contig9:438684..4387871622936380.4631636-CDS-E-siliculosus-1a_M_contig9:438684..438787Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 438685..438787 +
1696251051.8336923-CDS-E-siliculosus-1a_M_contig9:438684..4387871696251051.8336923-CDS-E-siliculosus-1a_M_contig9:438684..438787Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 438685..438787 +
1622936380.478658-CDS-E-siliculosus-1a_M_contig9:439098..4391561622936380.478658-CDS-E-siliculosus-1a_M_contig9:439098..439156Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 439099..439156 +
1696251051.8428319-CDS-E-siliculosus-1a_M_contig9:439098..4391561696251051.8428319-CDS-E-siliculosus-1a_M_contig9:439098..439156Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 439099..439156 +
1622936380.4907937-CDS-E-siliculosus-1a_M_contig9:439655..4397931622936380.4907937-CDS-E-siliculosus-1a_M_contig9:439655..439793Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 439656..439793 +
1696251051.8526435-CDS-E-siliculosus-1a_M_contig9:439655..4397931696251051.8526435-CDS-E-siliculosus-1a_M_contig9:439655..439793Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 439656..439793 +
1622936380.506521-CDS-E-siliculosus-1a_M_contig9:440378..4405161622936380.506521-CDS-E-siliculosus-1a_M_contig9:440378..440516Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 440379..440516 +
1696251051.8631659-CDS-E-siliculosus-1a_M_contig9:440378..4405161696251051.8631659-CDS-E-siliculosus-1a_M_contig9:440378..440516Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 440379..440516 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig9.16962.1

>prot_E-siliculosus-1a_M_contig9.16962.1 ID=prot_E-siliculosus-1a_M_contig9.16962.1|Name=mRNA_E-siliculosus-1a_M_contig9.16962.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=192bp
MMEAPCKNCLWCAYGSLCLGCAQFAVRKRALGGRLDDYVCCQGYFPSHCC
EPGDCGERRCPCFCLCMESFLCPSCAVSSSRMYLMDKFEVQPDPWDNRII
RFNNCLQLLSCICHCAAIFVQDFRELARLTDVLANLVYLSAVGCMTGQMM
AEMEYQEGTSPEAQFITGREYGAMLDRGINSKEAMEERRGY*
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mRNA from alignment at E-siliculosus-1a_M_contig9:437813..441415+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig9.16962.1 ID=mRNA_E-siliculosus-1a_M_contig9.16962.1|Name=mRNA_E-siliculosus-1a_M_contig9.16962.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=3603bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:437813..441415+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CAGGCGTGCTGCTTGATCTGCGTGAAGGATGACCCCGTGCCGGGCTCGAA GCTCGACGCCTACTACGGAAACCCCAACCAGTTCCAGATCGGAATGATGG AGGCACCGTGCAAGAACTGCCTATGTGAGAACTCGGTCCATCCTTCAACC TTGCGTCTCCTGTAGCATGCTCTCGTGTACAGCAATGATCGATCATTCTT TTTAAGCACACAAGGAAGTTTTCTGGGAGGCCTGGGTCCATCGTCTGTTG CTGAAGCTCGCCACGCCCTTCACACTCAACCCTCCATCTGGCCCTCCACT TCATGACGCCGCCCTCCCGCACTTGCGATGTCGTTGTTTGTGTCGAATTT TCGGGAGCAGGGTGTGCCTACGGGAGCCTGTGTTTGGGCTGCGCGCAGTT CGCCGTCAGGAAAAGAGCCCTGGGCGGCAGGCTTGACGACTACGTGTGCT GCCAAGGGTACTTCCCATGTGCGCGGTGTGCATCGGATACCGTCCCAGAG TTGTTTTCGATGTTGTGGCAATTTTGCTTCAGGAGGGCCTATGCCGATGT GTTGAGACTGACTGTCACTGCGACCTCCTGTGGTACGCATTTCCAACGAA AATGGCGCCGGATCGCACCCGTGTTGAAGGAGTCTCTGTGCTGACCAGGG TAGCGCAAATTCGCTTGTTCTCCGCTCGCTCGGGGTAAGCCCAAATCCCC GTCCCCCCCCCCGCGCCCTAGTATCAGGTGGCTCCAGTTGCATGCATACC CGCTTCGTGCAGTGGGCTTGAAGCTCACAGCGAACCTTTCGACGCATGTG TTGGAGTGCGACAGGTCGCTTCTGACCGCTCCACCTTCGCCCCGACTGCA TGGGCACTGTTTGTTCCTCCAGCACACTGTTGTGAACCAGGTGACTGCGG GGAGAGACGTTGTCCGTGCTTCTGCCTCTGCATGGAATCTTTCTTGTGCC CCAGCTGTGCTGTTAGCTCAAGCAGGTGAGTATTTGTTGCTTCCGCGCCC AAGTTGGCCGAAAGTGATACTGCTGTCTTGTTCTTCCTTGCTCTCGACCC GGCGAATCAAGGAGCTCGTGTACGAAAACCCTACACGCACCCCCCCTGCC GCCCGCAAGCGGGGTAAACGCGTGAGATACGTCAATCGTATTGAGCGCTT TGGAATGGACGATGTAGAAGTGTGGAGTGGGTTAATGTGAATAAGCACAG GATGATTCACGCTCAAGTGACCCCCTCGTGTTCAGCCCGCCTCCCTCTTC CTCTCTCGGTGGACGGCGGGTCTCGTTGTACGGCAGGATGTATCTCATGG ACAAGTTCGAGGTGCAGCCTGACCCGTGGGACAACCGCATCATCGTGAGT TAGGTCATCATCAATTGTTTACCGTATGGCAGTGTTGTTGTTGTTCGAAT ATTTATAGACCTACCCTAGATTACAAAAAAAAACACTCGAGCACTGTATC CGCACCACCAACGAATACGTAACGCATGTGCGGCGTAGCCAGGTGTACAG ATTGCGAGAAAGGTTACTCCGTTTATGAGCGGGGTTTTCTTTGCGCTGTG CATCTGTGGCCCCTGTTGAACATGTTTGAGGGGATCGCACCCCTTCAACA CCGACGTCCCCTTCTTAGAACAGCTGACGCGCCTTGTGAGGGCGATGCTC GGAACAGATGTAAGCACGACAACGTGCAGTACTCGCATACTACCTCGTGC ATTGTGGCAAGATACACAGCCAATCAATAAATCCAAGTTTGTCTTCGTGA ACTTGGTTGATTTTTTCCAGGCCTTCCTTCAAGCCCCTGAGTCGTGGAAT CATGCCCGACCCCCCGCCCATGCCGTGTCGTTTCGTATTGCAGCGCTTCA ACAACTGCCTGCAGCTGCTCTCGTGCATCTGCCACTGTGCCGCAATCTTC GTCCAGGACTTCCGCGAGCTGGCGAGGCTCACCGATGTCCTCGCGAACCT GGTTTACTTGTCTGCGGTCGGCTGTATGACTGTGAGATTACCCCCGGGTC TTGGCGTTGGTGTAGGTGGTGTGGCTTCCCTGCAAGAGACAGTCGCCCAA GGAACCTCGTTCGTGCAACGCAAGTAGGCTGGACAGAAAAGGTTTTCCGC GCTCGGCCTCAACACAAACTGTTGCGGTCAGCGTGTCACGCGATTTGCTT AGTGTTCGTTCAAACGGATGACGTTTAACCTGCAAAAATGAAACAACTGA AACATGCGAAAAACGTCAAACATTGGTTCTCTACACCGTTCGAGAGCGTT CGTCACGACGCAAACCGTCGAACATCAGGCAATGCGCAGGCGTCCCAAGG GTCTCGCCATTTGCTTCGAAGCGGCAACACAAGAACAGTATTAACATTCT GATCATTTCACCGCCGCCGATGTTCAAGCCTCATGTAGGGAAATCACTAC GATTCCCGTTCCTTGTCGTAAGTTGACCCCGCCCGCTCACATGCAGAACA CCTGTAGCAATGAGTATGCGATCTATCCAAGCCGTAAGAAGCGACGGGAA AAAATGATGTGTCTCATCCTTGCTCCCCCGCACGTTGGGTGAAATTTCTC GTTCGATGACCCCCAGGGCCAAATGATGGCCGAGATGGAGTACCAAGAAG GAACCTCCCCGGAGGCCCAATTCATCACGGGGCGTGAATACGGCGCCATG CTCGACCGTGGTATCAATTCGAAGGAAGCGATGGAAGAACGTCGGGGGTA TTGAGTGGACCTGTTTCGGGGGGGACATGCCTCGTGTTGGGAGGAAGCAT CGCACATACCATTTATTCGCGAAGATTGGTGGGATACATATTGTGGAGAT GAACCAAATCCTCAGAAATCGACCTCCAAGCTTCGTGAGTTGTGGCGTTT CCCCGAAACTGAGTAAGCGGTGTTGCCCAACCGCGAGTTCGTTGCAGGCT CTGTTTTAGACTATCATGCAGTAGGGTGGGATATTTTCTACGATGATGAC ATCACTAGAGCTGCTGTACCTGTTTTTTGTAGGTCAAACCCCACAGGGGC TGGCGTGTTGTGTCACGATTTCCGTGCTTCTTGGGCAAGACAGGGACTTG AACGGTGAGAGGTCGGCTTTTCCTGTCGTTGTTGCCCAAGATCATGCCAT CATTTTGAGTCAAGTATGGCTTGCGTGCATCCGCTGCTTTAGCTTGACTT GAAGTTGAGTGCGCGCGAAGCCCCCATTGTTGCCTGCGCTCGACGCTGGA CGGCACCCAACGTGGTTTTTCAGTGTTTGGTTGGAGGTCGACTCTTCGTG TTCGAAGGGATTCCACTATTTGCGCTTTGTTCGTTTGGTGAGGGAAAGAG GGTATTGACAGCGACTTTCAGAGAGTCGGGGCGCGAGGAGACAAAATTGA ATCAATGGGTGCTCTTTCTGTAAGATTACCATCATCAATGAATACTAGTC TAATTCATTCATTGATTTGACGTTTAGACTAAGGGATTTGAGTAATGTTT CTTGGAGTGCCGCCAGACTTACTATTCTACGGATTTGTTCGTCCTCCGCC TTCGAACAGTGGGGCAAAGGAGGTGGGTGTGCGTGTGCTGCTGATGGTGG ATAGCTGTCGAGGTCAGGTTTCACCTTGAACAAATAAATCAGACCAACTA CGG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig9:437813..441415+

>mRNA_E-siliculosus-1a_M_contig9.16962.1 ID=mRNA_E-siliculosus-1a_M_contig9.16962.1|Name=mRNA_E-siliculosus-1a_M_contig9.16962.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1152bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:437813..441415+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGATGGAGGCACCGTGCAAGAACTGCCTATATGATGGAGGCACCGTGCA
AGAACTGCCTATGGTGTGCCTACGGGAGCCTGTGTTTGGGCTGCGCGCAG
TTCGCCGTCAGGAAAAGAGCCCTGGGCGGCAGGCTTGACGACTACGTGTG
CTGCCAAGGGTACTTCCCATGGTGTGCCTACGGGAGCCTGTGTTTGGGCT
GCGCGCAGTTCGCCGTCAGGAAAAGAGCCCTGGGCGGCAGGCTTGACGAC
TACGTGTGCTGCCAAGGGTACTTCCCATCACACTGTTGTGAACCAGGTGA
CTGCGGGGAGAGACGTTGTCCGTGCTTCTGCCTCTGCATGGAATCTTTCT
TGTGCCCCAGCTGTGCTGTTAGCTCAAGCAGCACACTGTTGTGAACCAGG
TGACTGCGGGGAGAGACGTTGTCCGTGCTTCTGCCTCTGCATGGAATCTT
TCTTGTGCCCCAGCTGTGCTGTTAGCTCAAGCAGGATGTATCTCATGGAC
AAGTTCGAGGTGCAGCCTGACCCGTGGGACAACCGCATCATCGATGTATC
TCATGGACAAGTTCGAGGTGCAGCCTGACCCGTGGGACAACCGCATCATC
CGCTTCAACAACTGCCTGCAGCTGCTCTCGTGCATCTGCCACTGTGCCGC
AATCTTCGTCCAGGACTTCCGCGAGCTGGCGAGGCTCACCGATGTCCTCG
CGAACCTGGTTTACTTGTCTGCGGTCGGCTGTATGACTCGCTTCAACAAC
TGCCTGCAGCTGCTCTCGTGCATCTGCCACTGTGCCGCAATCTTCGTCCA
GGACTTCCGCGAGCTGGCGAGGCTCACCGATGTCCTCGCGAACCTGGTTT
ACTTGTCTGCGGTCGGCTGTATGACTGGCCAAATGATGGCCGAGATGGAG
TACCAAGAAGGAACCTCCCCGGAGGCCCAATTCATCACGGGGCGTGAATA
CGGCGCCATGCTCGACCGTGGTATCAATTCGAAGGAAGCGATGGAAGAAC
GTCGGGGGTATTGAGGCCAAATGATGGCCGAGATGGAGTACCAAGAAGGA
ACCTCCCCGGAGGCCCAATTCATCACGGGGCGTGAATACGGCGCCATGCT
CGACCGTGGTATCAATTCGAAGGAAGCGATGGAAGAACGTCGGGGGTATT
GA
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