mRNA_E-siliculosus-1a_M_contig9.16951.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.16951.1 vs. uniprot
Match: A0A6H5JED9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JED9_9PHAE) HSP 1 Score: 256 bits (653), Expect = 1.520e-77 Identity = 126/132 (95.45%), Postives = 128/132 (96.97%), Query Frame = 2
Query: 773 CXXXLQVPGEKAGAGLKPICVKVTVTANNPSPKEVVDAAVFGFVFDEDSTSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPDEDFSMKKLKFKSLKAISYAGGQQYGAITECEMNPLAAECDFD 1168
C QVPGEKAGAGLKP+CVKVTVTANNPSPKEVVDAAVFGFVFDEDSTSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPDEDFS+KKLKFKSLKAISYAGGQQYGAITECEMNPLAAECDFD
Sbjct: 112 CPPKTQVPGEKAGAGLKPVCVKVTVTANNPSPKEVVDAAVFGFVFDEDSTSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPDEDFSLKKLKFKSLKAISYAGGQQYGAITECEMNPLAAECDFD 243
BLAST of mRNA_E-siliculosus-1a_M_contig9.16951.1 vs. uniprot
Match: A0A835YQZ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQZ7_9STRA) HSP 1 Score: 173 bits (439), Expect = 2.070e-46 Identity = 83/131 (63.36%), Postives = 102/131 (77.86%), Query Frame = 2
Query: 773 CXXXLQVPGEKAGAGLKPICVKVTVTANNPSPKEVVDAAVFGFVFDEDSTSVVANNPDGASDAGQFAIIDKI-PKGSSRVSFQFVAAIEPDEDFSMKKLKFKSLKAISYAGGQQYGAITECEMNPLAAECD 1162
C QVPG+KAGAGL+P+C+KV A+NP+ K++ + A+FG VFDED TSVVANNPDG +DAGQFA+I+ + P G S++ FQFVAAI P E+ S K L F S+KAISY G +YGAITECEMNPLA ECD
Sbjct: 95 CPPNTQVPGQKAGAGLRPVCIKVKADADNPAKKDLENPAIFGRVFDEDGTSVVANNPDGGTDAGQFAMIEGVVPPGKSKIEFQFVAAIGPKEELSKKTLTFPSIKAISYPGAGRYGAITECEMNPLADECD 225
BLAST of mRNA_E-siliculosus-1a_M_contig9.16951.1 vs. uniprot
Match: A0A7S4D819_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D819_HETAK) HSP 1 Score: 128 bits (322), Expect = 7.070e-30 Identity = 64/121 (52.89%), Postives = 82/121 (67.77%), Query Frame = 2
Query: 800 EKAGAGLKPICVKVTVTANNPSPKEVVDAAVFGFVFDEDSTSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPDEDFSMKKLKFKSLKAISYAGGQQYGAITECEMNPLAAECD 1162
K+ AGL CV+VT NP K ++DA+VFGFVFD +SVV NNPD SDAGQFAII KI G S + F+ VAA+ P E + +L+F+S+KAISY GG +Y AI++C+ NP CD
Sbjct: 129 SKSTAGLVSYCVEVTADVFNPEKKTIIDASVFGFVFDNTGSSVVLNNPDARSDAGQFAIIPKIVPGKSNIKFEMVAAV-PSERGDVGELRFESIKAISYPGGDRYKAISDCDFNPSGDGCD 248
BLAST of mRNA_E-siliculosus-1a_M_contig9.16951.1 vs. uniprot
Match: K0THP2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0THP2_THAOC) HSP 1 Score: 124 bits (312), Expect = 2.390e-28 Identity = 64/156 (41.03%), Postives = 97/156 (62.18%), Query Frame = 2
Query: 713 PVSCSAVHPSSVLGCFGVSCCXXXLQVPGEKAGAGLKPICVKVTVTANNPSPKEVVDAAVFGFVFDEDST-SVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPDEDFSMKK-----LKFKSLKAISYAGGQQYGAITECEMNPLAAECD 1162
P+ ++PS V + C +PGEKA G++ +CV+V SPK++ ++G+V D +ST SV+ANNPD +DAGQFAII +I ++ F+F+AA+ ++D S + L FKSL+ +S+ GGQQYGAI+ CEMN ++EC+
Sbjct: 94 PIKIDIINPSYV-----AAPCPKDKPIPGEKAMKGMRGLCVQVKAELAENSPKDLEKVGIYGYVDDAESTESVLANNPDSGTDAGQFAIIPEIKTTDKKIEFEFIAAVPMEKDISKYEDGIGPLSFKSLRIVSFPGGQQYGAISPCEMNEFSSECE 244
BLAST of mRNA_E-siliculosus-1a_M_contig9.16951.1 vs. uniprot
Match: A0A7S2SGX2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGX2_9STRA) HSP 1 Score: 118 bits (295), Expect = 1.200e-27 Identity = 56/113 (49.56%), Postives = 79/113 (69.91%), Query Frame = 2
Query: 827 ICVKVTVTANNPSPKEVVDAAVFGFVFDE-DSTSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPDEDFSMKKLKFKSLKAISYAGGQQYGAITECEMNPLAAECD 1162
+C++VT + NP+ K +VD AVFGFV D SV+ANNPD SDAGQFA ID++P G RVSF FVA + + + + L+F+S+KAISY GG ++ ++ CE++ LA EC+
Sbjct: 1 VCLQVTCSVTNPTKKSLVDTAVFGFVLDPITGASVIANNPDLRSDAGQFASIDEVPPGDQRVSFIFVATLGKESEGKLPPLEFRSIKAISYPGGARFAELSPCELDSLAPECE 113
BLAST of mRNA_E-siliculosus-1a_M_contig9.16951.1 vs. uniprot
Match: A0A1Z5J9N6_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J9N6_FISSO) HSP 1 Score: 121 bits (304), Expect = 1.620e-27 Identity = 58/136 (42.65%), Postives = 88/136 (64.71%), Query Frame = 2
Query: 773 CXXXLQVPGEKAGAGLKPICVKVTVTANNPSPKEVVDAAVFGFVFDEDS-TSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPDEDFS-----MKKLKFKSLKAISYAGGQQYGAITECEMNPLAAECD 1162
C +PG+KA G++ +CV V T N+P PKE+ V+GF+ D D+ SV+ANNPD ++DAGQFAI++K+ + F+F+AA+ ++D + + L F+SL+ +S+ GGQQYG I CEMN + EC+
Sbjct: 85 CPPNKPIPGQKAMQGMRGLCVTVQATLNDPVPKELEKVGVYGFITDGDTGDSVLANNPDLSTDAGQFAIVEKVKTTDKTIEFEFIAAVPREKDLTQYDNGIGPLHFESLRLVSFPGGQQYGEINPCEMNEFSIECE 220
BLAST of mRNA_E-siliculosus-1a_M_contig9.16951.1 vs. uniprot
Match: A0A8J5XAI3_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XAI3_DIALT) HSP 1 Score: 119 bits (297), Expect = 6.930e-27 Identity = 63/124 (50.81%), Postives = 76/124 (61.29%), Query Frame = 2
Query: 797 GEKAGAGLKPICVKVTVTANNPSPKEVVDAAVFGFVFDEDSTSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPDEDFSMKKLKFKSLKAISYAGGQQYGAITECEMNPLAAECDFD 1168
G A G+K CV+VTVT NPS K++ D+AVFG VF+E S+VANN DG +DAGQFA+I I G S F FVA D M KL+F+SLKAI+Y GG +Y CE NP C D
Sbjct: 95 GAAASKGVKQRCVRVTVTGVNPSGKQLTDSAVFGRVFNEAGNSIVANNQDGRTDAGQFAMIPNIATGESTFDFVFVAT---DNQAEMGKLRFESLKAIAYPGGDRYKVYDPCEQNPAMEGCGMD 215
BLAST of mRNA_E-siliculosus-1a_M_contig9.16951.1 vs. uniprot
Match: A0A7S2SGY2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGY2_9STRA) HSP 1 Score: 119 bits (299), Expect = 1.490e-26 Identity = 58/112 (51.79%), Postives = 78/112 (69.64%), Query Frame = 2
Query: 830 CVKVTVTANNPSPKEVVDAAVFGFVFDE-DSTSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPDEDFSMKKLKFKSLKAISYAGGQQYGAITECEMNPLAAECD 1162
CVKVT + NP+ K +VD AVFGFV D SV+ANNPD SDAGQFA ID++P G RVSF FVA + + + + L+F+S+KAISY GG ++ ++ CE++ LA EC+
Sbjct: 144 CVKVTCSVTNPTKKSLVDTAVFGFVLDPITGASVIANNPDLRSDAGQFASIDEVPPGDQRVSFIFVATLGKESEGKLPPLEFRSIKAISYPGGARFAELSPCELDSLAPECE 255
BLAST of mRNA_E-siliculosus-1a_M_contig9.16951.1 vs. uniprot
Match: B8BWP2_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWP2_THAPS) HSP 1 Score: 117 bits (294), Expect = 6.860e-26 Identity = 61/156 (39.10%), Postives = 95/156 (60.90%), Query Frame = 2
Query: 713 PVSCSAVHPSSVLGCFGVSCCXXXLQVPGEKAGAGLKPICVKVTVTANNPSPKEVVDAAVFGFVFD-EDSTSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPDEDFSMKK-----LKFKSLKAISYAGGQQYGAITECEMNPLAAECD 1162
P+ + ++P+ + + C +PGEKA G++ +CV+VT PKE+ V+G+V D E S SV+ANNPD +DAGQF +I+ + +V F+F+AA+ ++D + + L+FKSL+ IS+ GGQQ+GAI CEMN + EC+
Sbjct: 97 PIKINILNPT-----YTAAPCPPSKPIPGEKAMKGMRGLCVQVTAELEELPPKELEKVGVYGYVNDAETSESVLANNPDSGTDAGQFGMIESVGIKDKKVEFEFIAAVPMEKDVTSYENGIGPLEFKSLRIISFPGGQQFGAINPCEMNEFSEECE 247
BLAST of mRNA_E-siliculosus-1a_M_contig9.16951.1 vs. uniprot
Match: A0A7S1DBN0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DBN0_CYCTE) HSP 1 Score: 117 bits (292), Expect = 8.040e-26 Identity = 61/156 (39.10%), Postives = 93/156 (59.62%), Query Frame = 2
Query: 713 PVSCSAVHPSSVLGCFGVSCCXXXLQVPGEKAGAGLKPICVKVTVTANNPSPKEVVDAAVFGFVFDEDS-TSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPDEDFSMKK-----LKFKSLKAISYAGGQQYGAITECEMNPLAAECD 1162
P+ + V+P + C +PGEKA G++ +CV V +PK++ V+GFV D D+ SV+ANNPD ++DAGQFA+++ + +V+F FVAA+ ++D S + L F SL+ IS+ GGQQYGAI+ CEM+ + EC+
Sbjct: 77 PIKVALVNPV-----YSAQPCPPNRPIPGEKAMKGMRGLCVTVQADLETETPKDLDKVGVYGFVTDSDTGESVLANNPDLSTDAGQFAMVESVTTSDKKVTFDFVAAVPREKDISQYENGIGPLTFGSLRVISFPGGQQYGAISPCEMDEFSMECE 227 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.16951.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig9.16951.1 >prot_E-siliculosus-1a_M_contig9.16951.1 ID=prot_E-siliculosus-1a_M_contig9.16951.1|Name=mRNA_E-siliculosus-1a_M_contig9.16951.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=263bp MHGYMDVRCGELLACYLAYGAEDSRSCAKCRRCPMYSPISSEPTYRMPGEback to top mRNA from alignment at E-siliculosus-1a_M_contig9:336244..340032- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig9.16951.1 ID=mRNA_E-siliculosus-1a_M_contig9.16951.1|Name=mRNA_E-siliculosus-1a_M_contig9.16951.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=3789bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:336244..340032- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig9:336244..340032- >mRNA_E-siliculosus-1a_M_contig9.16951.1 ID=mRNA_E-siliculosus-1a_M_contig9.16951.1|Name=mRNA_E-siliculosus-1a_M_contig9.16951.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1578bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:336244..340032- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |