mRNA_E-siliculosus-1a_M_contig9.16942.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.16942.1
Unique NamemRNA_E-siliculosus-1a_M_contig9.16942.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.16942.1 vs. uniprot
Match: D8LQX1_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX1_ECTSI)

HSP 1 Score: 488 bits (1256), Expect = 1.320e-173
Identity = 246/267 (92.13%), Postives = 255/267 (95.51%), Query Frame = 1
Query:    1 MPYFVRAVRLVIAYNRNYRLQYAKFVKRKHATGVLVLTAIGLTIRAGLFFGDDPAHYSSLLLPMARAHRGGVQEWFRATVVPVEEVFMVQASDECGVLRLASGGGELAQQFGKFCRENLCMESWDFLVDVVRYERIAPSLIANHPEDEQFNSFLLILNQYLLPTSPDEINISSSMSKRILSFGTREVFNELSLEERVGILKEPFDEIVRMLEQNLLNKFQRRVALDREAQLLTAADGDVDLVTVMKASDHRVGSSKPEISVSGYTFG 801
            MPYF+RAVRLVIAYNR YRL+YAKFVKRKHATGVLVLT I LTIRAGLFFGDDPAHYSSLLLPMARAHRGGVQEWFRATVVPVEEVF VQASDECGVLRLASGGGELAQQFGKFC+ENLCMESWDFLVDVVRYERIAPSL+AN PEDEQFNSFL ILNQYLLPTSPDEINISSSMS RIL+FGTR+ FNELSLEER+GIL EPFDEIVRMLEQNLLNKFQRRVA+DREAQLL AADGDVDLVTV+KASDHRV SSKPEISVSGYT G
Sbjct:    1 MPYFIRAVRLVIAYNRKYRLKYAKFVKRKHATGVLVLTFIVLTIRAGLFFGDDPAHYSSLLLPMARAHRGGVQEWFRATVVPVEEVFTVQASDECGVLRLASGGGELAQQFGKFCQENLCMESWDFLVDVVRYERIAPSLVANDPEDEQFNSFLFILNQYLLPTSPDEINISSSMSTRILAFGTRDAFNELSLEERIGILGEPFDEIVRMLEQNLLNKFQRRVAVDREAQLLAAADGDVDLVTVLKASDHRVCSSKPEISVSGYTLG 267          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16942.1 vs. uniprot
Match: D8LQW8_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW8_ECTSI)

HSP 1 Score: 373 bits (957), Expect = 4.900e-129
Identity = 189/204 (92.65%), Postives = 193/204 (94.61%), Query Frame = 1
Query:  190 MARAHRGGVQEWFRATVVPVEEVFMVQASDECGVLRLASGGGELAQQFGKFCRENLCMESWDFLVDVVRYERIAPSLIANHPEDEQFNSFLLILNQYLLPTSPDEINISSSMSKRILSFGTREVFNELSLEERVGILKEPFDEIVRMLEQNLLNKFQRRVALDREAQLLTAADGDVDLVTVMKASDHRVGSSKPEISVSGYTFG 801
            MARAHRGGVQEWF ATVVPVEEVF VQASDECGVLRLASGGGELAQQFGKFC+ENLCMESWDFLVDVVRYERIAPSLIAN PEDEQFNSFL ILNQYLLPTSPDEINISSSMS RIL+FGTRE FNELSLEERVGILKEPFDEIVRMLEQNLLNKFQRRVA+DREAQLL AADGD DLVTV+KASDHRV  SKPEISVSGYT G
Sbjct:    1 MARAHRGGVQEWFGATVVPVEEVFTVQASDECGVLRLASGGGELAQQFGKFCQENLCMESWDFLVDVVRYERIAPSLIANDPEDEQFNSFLFILNQYLLPTSPDEINISSSMSTRILAFGTREAFNELSLEERVGILKEPFDEIVRMLEQNLLNKFQRRVAVDREAQLLAAADGDADLVTVLKASDHRVCGSKPEISVSGYTLG 204          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16942.1 vs. uniprot
Match: A0A6H5K5R8_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5R8_9PHAE)

HSP 1 Score: 305 bits (781), Expect = 3.320e-100
Identity = 173/324 (53.40%), Postives = 192/324 (59.26%), Query Frame = 1
Query:    4 PYFVRAVRLVIAYNRNYRLQYAKFVKRKHATGVLVLTAIGLTIRAGLFFGDDPAHYSS------------------------------------------------------------------------------------------------LLLPMARAHRGGVQEWFRATVVPVEEVFMVQASDECGVLRLASGGGELAQQFGKFCRENLCMESWDFLVDVVRYERIAPSLIANHPEDEQFNSFLLILNQYLLPTSPDEINISSSMSKRILSFGTREVFNELSLEERVGILKEPFDEIVRMLEQNLLNKFQRRVALDREA 687
            PY +RAVRLV+AYNR YRL+YA+FVKR +A G   +  IGLTIRAG+FFG DPAHYSS                                                                                                LLLPM RAHRGGV+ WFRATVVPV+E   V A D  GV+ LAS GGE+A+QFGKFCRENLCMESWDFLVDVVRYER+APS IA +PEDEQFN FL ILN YLLPTSPDEINISS+M KRI  F TRE FN+L LEERV I KEPFDEIVR+LEQNLLNKFQ+ +ALDR A
Sbjct:    6 PYVIRAVRLVVAYNRKYRLKYARFVKRNYALGFWAVGCIGLTIRAGIFFGTDPAHYSSDMRECFYWDDIMLMGAVLLFGGAPMSCLAIRISRVHDAFKLREELCFVFIGCSCCVAVLWVIQVLVELELLSDTSALHVVVEVQALLIGMNIGLSGLLLPMVRAHRGGVKAWFRATVVPVDETVAVSALDVDGVVGLASSGGEMAEQFGKFCRENLCMESWDFLVDVVRYERMAPSPIARNPEDEQFNCFLHILNHYLLPTSPDEINISSAMHKRIAPFRTREAFNKLGLEERVSIFKEPFDEIVRVLEQNLLNKFQKLIALDRGA 329          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16942.1 vs. uniprot
Match: A0A6H5KE83_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE83_9PHAE)

HSP 1 Score: 233 bits (594), Expect = 3.160e-70
Identity = 127/204 (62.25%), Postives = 139/204 (68.14%), Query Frame = 1
Query:  172 SSLLLPMARAHRGGVQEWFRATVVPVEEVFMVQASDECGVLRLASGGGELAQQFGKFCRENLCMESWDFLVDVVRYERIAPS--------------------------------LIANHPEDEQFNSFLLILNQYLLPTSPDEINISSSMSKRILSFGTREVFNELSLEERVGILKEPFDEIVRMLEQNLLNKFQRRVALDREA 687
            S LLLPM R HRGGV+ WFRATVVPV+E   V A D  GV+ LAS  GE+A+QFGKFCRENLCMESWD LVDVVRYER+ PS                                    +PEDEQ   FL ILN YLLPTSPDEINISS+M KRI  F TRE FN+LSLEERV I KEPFDEIVR+LEQNLLNKFQ+R+ALDR A
Sbjct:  284 SGLLLPMVRTHRGGVKAWFRATVVPVDETVAVSALDVDGVVGLASSVGEMAEQFGKFCRENLCMESWDLLVDVVRYERMVPSPSNIFCRVGFDTRWSCLWNFSHPNGLTWFVRFADRENPEDEQLKCFLHILNHYLLPTSPDEINISSAMHKRIAPFRTREAFNKLSLEERVSIFKEPFDEIVRVLEQNLLNKFQKRIALDRGA 487          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16942.1 vs. uniprot
Match: A0A6H5L0L8_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0L8_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 4.050e-61
Identity = 140/354 (39.55%), Postives = 180/354 (50.85%), Query Frame = 1
Query:    1 MPYFVRAVRLVIAYNRNYRLQYAKFVKRKHATGVLVLTAIGLTIRAGLFFGDDPAHYSS-----------LLLPMARAHRG------------------------------------------------------------------GVQE-----------------WFRATVVPVEEVFMVQASDECGVLRLASGGGELAQQFGKFCRENLCMESWDFLVDVVRYERIAPSLIANHPEDEQFNSFLLILNQYLLPTSPDEINISSSMSKRILSFGTREVFNELSLEERVGILKEPFDEIVRMLEQNLLNKFQRRVALDREAQL---LTAADGDVDLVTVMKASDHRVGSSKP 771
            +PYF+R VRLV+AYN++YR ++A+FVK      +     IGL +RA  FFG  P H+SS           LL+  A A  G                                                                  G+Q                  W + +V+PVE+       D  GV  LA  GG++A +FG+F +ENLCMESWDF++D V+YE     + ++   D+QF+ FL++LNQYLLPTSPDE+NISS MSKR+ SF TRE F +L  EER GILKEP DEIVRMLEQNLLNKFQ R+AL+REA+       A GD  L+ +MK S   V  SKP
Sbjct:   92 IPYFIRVVRLVVAYNQSYRAKFARFVKWTPMMRIWAGATIGLVLRAVFFFGSKPVHFSSNAHECFYFDDILLMTGACAFTGVPILLIARSLIHVFDAFRIRQEMERAIGICMSLSMVIVLLQVLVYFEVLADSSELHFAVEAMAFLFGIQVFTHGLMVPLLAHYKEYGWVKPSVLPVEDETSSN-EDVDGVYALAVKGGDMADRFGRFVQENLCMESWDFILDAVKYE-----MESSCEPDDQFDEFLILLNQYLLPTSPDEVNISSKMSKRMASFKTREAFTQLEQEERRGILKEPLDEIVRMLEQNLLNKFQSRIALEREAKREAQQAEAKGDPALMALMKVSQ-TVPRSKP 438          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16942.1 vs. uniprot
Match: D8LQY9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY9_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 9.740e-31
Identity = 85/212 (40.09%), Postives = 111/212 (52.36%), Query Frame = 1
Query:   13 VRAVRLVIAYNRNYRLQYAKFVKRKHATGVLVLTAIGLTIRAGLFFGDDPAHYSSLLLPMARAHRGGVQEWFRATVVPVEEVFMVQASDECGVLRLA-SGGGELAQQFGKFCR-----ENLCMESWDFLVDVVRYERIAPSLIANH-------------------------PEDEQFNSFLLILNQYLLPTSPDEINISSSMSKRILSFGTR 555
            +RA+RLVIAYNR YRL+YAKFVKRK A G   + +IGLT+RAGLFFG DPAHYSS            ++E F    + V  + ++       +L +  S   +  Q   + CR       + +  W  ++ V+    + P   A H                           +EQFNSFL ILNQYLLPTSPDEINISS+MSK + +F TR
Sbjct:    2 IRAIRLVIAYNRKYRLKYAKFVKRKRALGFWAVISIGLTVRAGLFFGTDPAHYSS-----------DMRECFYWDDIFVVGIGLIFGGAPVSLLVIRISRVNDAFQLREELCRTIMGCSGIAVILW--VIQVLVELEVWPDTPALHVVVEVLILLLGMNAGYWGLLLPMMSSPEEQFNSFLYILNQYLLPTSPDEINISSAMSKHMATFRTR 200          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16942.1 vs. uniprot
Match: A0A6H5JLH7_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLH7_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 1.170e-26
Identity = 68/172 (39.53%), Postives = 95/172 (55.23%), Query Frame = 1
Query:  223 WFRATVVPVEEVFMVQASDEC-------GVLRLASGGGELAQQFGKFCRENLCMESWDFLVDVVRYERIAPSLIANHPEDEQFNSFLLILNQYLLPTSPDEINISSSMSKRILSFGTREVFNELSLEERVGILKEPFDEIVRMLEQNLLNKFQRRVALDREAQLLTAADGDV 717
            WF  + V   E + V AS+         GVL  A  GG +A  F ++C  +LC ESWDF+V   +YE I+       PE EQ+  FL I  +YL PTSP E+NISS M  +++S      F+ L  + R  +L+EP  E+VRMLE+NLLNKF++   + +  + L   D  V
Sbjct:  164 WFGTSTVVPTEGWAVSASNRSSGPTHGDGVLGYAQEGGSVASMFEQYCMRSLCAESWDFIVAACKYEEISD------PE-EQYKMFLRITEEYLRPTSPQEVNISSKMQAKMVSLQDSVKFSSLDGDSRRNVLQEPLKEVVRMLEENLLNKFKQTPEMRKRREDLEREDWQV 328          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16942.1 vs. uniprot
Match: A0A6H5KD71_9PHAE (RGS domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD71_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 5.430e-25
Identity = 73/186 (39.25%), Postives = 98/186 (52.69%), Query Frame = 1
Query:  223 WFRATVVPVEEVFMVQASDEC-------GVLRLASGGGELAQQFGKFCRENLCMESWDFLVDVVRYERIAPSLIANHPEDEQFNSFLLILNQYLLPTSPDEINISSSMSKRILSFGTREVFNELSLEERVGILKEPFDEIVRMLEQNLLNKFQR-------RVALDREAQLL-----TAADGDVDL 723
            WF    V   E + V AS          GVL  A  GG +A  F  FC  +LC ESWDF+V   +YE I+       PE EQ+  FL I  +YL PTSP E+NI S M  +++S      F+ L  + R  +L+EP  EIVRMLE+NLLNKF++       R  L+R+   +      AA+GD ++
Sbjct:  126 WFGTPRVVPTEGWAVSASTRSSGPTHGDGVLGYAQEGGSVASMFKHFCTRSLCAESWDFIVAACKYEEISD------PE-EQYEMFLRITEEYLQPTSPQEVNIGSKMQAKMVSLQDSVKFSSLDGDSRRNVLQEPLKEIVRMLEENLLNKFKQTPEMRKWREDLERQDWFIEQANSAAAEGDENM 304          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16942.1 vs. uniprot
Match: D7FYH4_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYH4_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 4.370e-20
Identity = 44/90 (48.89%), Postives = 62/90 (68.89%), Query Frame = 1
Query:  286 GVLRLASGGGELAQQFGKFCRENLCMESWDFLVDVVRYERIAPSLIANHPEDEQFNSFLLILNQYLLPTSPDEINISSSMSKRILSFGTR 555
            GVL L   GG+++++F  +C+ NLC+ESWDFLVD   YE +  +       DEQF +F +I ++YLL TSPDE+NISS+ SK + +F TR
Sbjct:    6 GVLALVREGGDMSKRFEHYCKTNLCLESWDFLVDATLYEMMDAT-----DADEQFMTFTMISDRYLLATSPDEVNISSATSKHVAAFRTR 90          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16942.1 vs. uniprot
Match: D7FYH3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYH3_ECTSI)

HSP 1 Score: 84.3 bits (207), Expect = 2.670e-17
Identity = 40/90 (44.44%), Postives = 60/90 (66.67%), Query Frame = 1
Query:  286 GVLRLASGGGELAQQFGKFCRENLCMESWDFLVDVVRYERIAPSLIANHPEDEQFNSFLLILNQYLLPTSPDEINISSSMSKRILSFGTR 555
            GVL L   GG+++++F  +C+ NLC+ESWDFL+D   YE     ++     DEQF +F +I ++YLL TSPDE+NI+ +  K + +F TR
Sbjct:    6 GVLALVREGGDMSKRFEHYCKMNLCLESWDFLIDRALYE-----MMDTTHADEQFMAFTMISDRYLLATSPDEVNIAGATRKHMAAFRTR 90          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.16942.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LQX1_ECTSI1.320e-17392.13RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LQW8_ECTSI4.900e-12992.65RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K5R8_9PHAE3.320e-10053.40RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KE83_9PHAE3.160e-7062.25RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L0L8_9PHAE4.050e-6139.55RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LQY9_ECTSI9.740e-3140.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JLH7_9PHAE1.170e-2639.53RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KD71_9PHAE5.430e-2539.25RGS domain-containing protein n=3 Tax=Ectocarpus s... [more]
D7FYH4_ECTSI4.370e-2048.89RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FYH3_ECTSI2.670e-1744.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:220255..223431 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size804
Model size804
Exons5
Hectar predicted targeting categorymitochondrion
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
Ec32 orthologEc-07_001900.1
Ec32 ortholog descriptionRGS domain
EggNOG OGs2D0MX@1,2SERP@2759
EggNOG free text desc.Regulator of G protein signaling domain
Seed eggNOG ortholog2880.D8LTR6
Seed ortholog evalue2.8e-10
Seed ortholog score72.8
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.16942.1prot_E-siliculosus-1a_M_contig9.16942.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig9 220255..223431 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936376.262953-CDS-E-siliculosus-1a_M_contig9:220254..2204301622936376.262953-CDS-E-siliculosus-1a_M_contig9:220254..220430Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 220255..220430 +
1696251049.6450174-CDS-E-siliculosus-1a_M_contig9:220254..2204301696251049.6450174-CDS-E-siliculosus-1a_M_contig9:220254..220430Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 220255..220430 +
1622936376.3942456-CDS-E-siliculosus-1a_M_contig9:221824..2220681622936376.3942456-CDS-E-siliculosus-1a_M_contig9:221824..222068Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 221825..222068 +
1696251049.6587098-CDS-E-siliculosus-1a_M_contig9:221824..2220681696251049.6587098-CDS-E-siliculosus-1a_M_contig9:221824..222068Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 221825..222068 +
1622936376.4548662-CDS-E-siliculosus-1a_M_contig9:222413..2225471622936376.4548662-CDS-E-siliculosus-1a_M_contig9:222413..222547Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 222414..222547 +
1696251049.6690018-CDS-E-siliculosus-1a_M_contig9:222413..2225471696251049.6690018-CDS-E-siliculosus-1a_M_contig9:222413..222547Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 222414..222547 +
1622936376.5123615-CDS-E-siliculosus-1a_M_contig9:222815..2229431622936376.5123615-CDS-E-siliculosus-1a_M_contig9:222815..222943Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 222816..222943 +
1696251049.6830075-CDS-E-siliculosus-1a_M_contig9:222815..2229431696251049.6830075-CDS-E-siliculosus-1a_M_contig9:222815..222943Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 222816..222943 +
1622936376.5380726-CDS-E-siliculosus-1a_M_contig9:223309..2234311622936376.5380726-CDS-E-siliculosus-1a_M_contig9:223309..223431Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 223310..223431 +
1696251049.6934292-CDS-E-siliculosus-1a_M_contig9:223309..2234311696251049.6934292-CDS-E-siliculosus-1a_M_contig9:223309..223431Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 223310..223431 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig9.16942.1

>prot_E-siliculosus-1a_M_contig9.16942.1 ID=prot_E-siliculosus-1a_M_contig9.16942.1|Name=mRNA_E-siliculosus-1a_M_contig9.16942.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=268bp
MPYFVRAVRLVIAYNRNYRLQYAKFVKRKHATGVLVLTAIGLTIRAGLFF
GDDPAHYSSLLLPMARAHRGGVQEWFRATVVPVEEVFMVQASDECGVLRL
ASGGGELAQQFGKFCRENLCMESWDFLVDVVRYERIAPSLIANHPEDEQF
NSFLLILNQYLLPTSPDEINISSSMSKRILSFGTREVFNELSLEERVGIL
KEPFDEIVRMLEQNLLNKFQRRVALDREAQLLTAADGDVDLVTVMKASDH
RVGSSKPEISVSGYTFG*
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mRNA from alignment at E-siliculosus-1a_M_contig9:220255..223431+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig9.16942.1 ID=mRNA_E-siliculosus-1a_M_contig9.16942.1|Name=mRNA_E-siliculosus-1a_M_contig9.16942.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=3177bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:220255..223431+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGCCGTACTTTGTCCGGGCCGTCCGATTGGTGATCGCGTACAATCGCAA CTATCGGCTACAGTACGCCAAATTCGTGAAGAGAAAACATGCAACGGGTG TTTTGGTCCTGACCGCCATTGGGCTCACCATCCGAGCCGGGCTGTTCTTC GGGGACGATCCTGCACACTACTCGAGGTGACACGACACAATCACCGCTTG AGCCTATCAGAGCGGACGTCTTCTTTGTACGCATATGAGTGTTTGATGTA AACGATTTTCTCCTAAATATATCTAGTAGACACCCACGAAAGATTGCGTC GCACTCATATCTAATCTAATACTAATGGGCTTGGATGGAGGTGCACGGTG GAAAGTTCGCTTCACCGCCTGACGTTTCCCTCTGCCCCGACGACACCGAC ATCTATCTGTGACAGCATGTATGCATTACGGTGGAGTAGCTGCGACTGTT ACCGAACACGATAAACGTGTGTTGAAGATACTGTAGGTGCGCTCCTCCAA CCTCGTGTACCCGCCTGCTTAACCGAATAATATGGTATCTCTTCTCTACA GTGACATGCGAGAGTGCTTCTACTTTGATGACGTCATGCTGGGGGGAGCA GTCCTCATTGTGGCCGGAGGGCCACTATCCATTTTGGTCATTCGAATATC ACGGGTAAACGACGCTTTCAAGCTTCGCGAGGAATTGTGCTGTTCGATGA TCGGTGGCAGCACCATCGCAAGTGAGGAAAATACGTACGCAGAAATGACC CCATATTTACTATCTATCGAGGGTTTCGGAGGCAAGCATACGTATATAGG GCACACGGACGTCCTGGTGCAGAGTGAATAACTGATAATCAATAGACTAA GATGTCTTCCACACGGTGGTTCTGTCTGGTAAACGGGTGTTCGTTCGTAC AGCAATGTTGTATTTGCCATCCATTCACGAACACGCTCCATGTAGGGAGG TGGGTTGAGGCCGTTGGTGGCTACGGGTATTTCCGTGCTGTGAATCAAGG ACAGAAAGACCCAACGCCGGCATGTTCTAGAGTACCACAGTTCCAGCGAC GACTGCGAAAAGCTGTTTCGATTCATTCATCACTTGCTGGAGCACGCGCT ACTCACTCTTTTCCTGAATATTCCACCTCCTTGTCTCTCCCTGCGCTCCA CCCAGCTACACATTTTGTGCTCCAAGTACTGTTGGAGTTGGACGTTTTGT CAAACACGCCTGCACTTCATCTGGTAGTCGAAGTGCTATCGCTCCTGTTC GGAATCAACGCAGTGGTTTGGGGGTGAGATGAAAAGTAGTGCGAAGTTTA TGGTTTTGGATCACGACACGTCTGTGTGTGTCCTATGTAGACTGATGTAA GTTTTGACTTCCTAGGGGAACGTGATACTATGTAGCACATCCAATGTCAT GAGGCCTCCCTCCCTCTTTGCGAGGACGCACGACAGCTTATGGGTATGCC AAGGGGTAATTCGATCCTCTCCTGCTGCCGGGGTGTCCATGAAGCCAACC CTCCATTTCTATTTTGGTCGCCTTCGCGATAATAATCTCACCCAATGCGT TGGCGCTTGCTTCGACGCAGCTTGTTGCTTCCCATGGCGAGAGCTCACCG TGGTGGGGTGCAGGAATGGTTCAGGGCCACCGTGGTTCCCGTTGAAGAAG TCTTTATGGTGCAGGCGTCGGATGAGTGCGGCGTGTTACGGCTCGCAAGC GGCGGTGGAGAACTGGCTCAGCAGTTTGGAAAGTTCTGTCGGGAAAACTT GTGCATGGAGAGCTGGGATTTCCTCGTCGACGTTGTCCGCTACGAACGGA TTGCGCCAAGCCTCGTGCGTATTCTTTGAAGTGTGCAAGACACAGAATAC GAAAGATATAGTGCTCCTTTGACCCAGTGACACACACAAGCTACAGCTCA TTCACTCTCTGCGCTCTGCGGGATGGACTCTGTAGGGGTTACATATGCAT ATCGGTTCGGCGGCGTGCTTGAGATGTCGGGGTATCTATTCCTTGTGCAG GATCGAGGATCGAATTCCTCGCGAACAGAGATACCGCCTGCTATCCGACG TGAACTAACACGGTGTTGGTCGTTTTGTGTGTATAGTTTCGGTACGGTCG ATCATCTTCTCTGCTCCATGGGCTCACCGCAGGTGCCCACCATGTTGTGT TACCCACAGATCGCGAACCACCCTGAGGACGAGCAGTTCAACTCTTTCTT GCTCATCCTGAACCAATACCTGCTTCCCACGTCACCCGACGAGATCAACA TATCGAGCTCGATGAGCAAACGCATCTTGTCGTTCGGAACAAGGTGATCC TGTGGCCGCTGTCACCGTAGGCTACCTCGGTAACCCCAAGCCCTTTGGGC GACGCGATTCAAAGATGGGTACCCGCGTATAAAAACACGCGCACCCGGCG GTGTGAAGCACATCGCTTCACCTTGATTTCAGCGTACGCTAGAGTGCCAA AGTACTGGTATCATGGGCTCGGGGGTCTCAGTAGACGTCTGCAACGATCG GTGGTCCTCGATGCATTCGTACTGCAGAGTTCATTCGGTTGGTCTTTGCC CCGAACCACAGGGAGGTCTTCAACGAGCTCAGCCTCGAGGAGCGGGTCGG CATACTAAAGGAACCCTTCGACGAGATCGTCCGGATGCTGGAGCAAAATC TGCTAAACAAGTTCCAGAGACGCGTAGCTCTGGACCGGGGTGCGTTTGCC TGTGACTGTATGTAGGGGGGGATTCTAACGCAGAAACCTCTGGGATGCGC TCCAACAGTTTTCGAGTGCGGTCCTGTTATTAACCCAGTAAATACTGCAG AAAAATGGGTGACTGCGCTGATATCAACCCTAGGGGGCATACCCCGCGGG GTCAATATCTTTCAGAGAGAATCGGCAGAAGTTAAATACTCTTAGACGGA TGAAATCAGAGTTGTCCCGTCGTATGACTGTACCTTTTGTCGCGGCTACA ATATCTCTTCACCTACTCAATCAACCTTTTTCGCGTGTCGCGGTTTTCCT AAGCTACACATTGCGCTCACGCTTTCATCTCCTCCCGCGCAATTTGCCCT GTCAGAGGCCCAGCTGCTCACGGCTGCGGATGGGGATGTGGATCTGGTGA CCGTTATGAAGGCATCGGACCATCGCGTTGGTAGTTCGAAGCCGGAAATA TCTGTTTCCGGATACACTTTCGGCTAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig9:220255..223431+

>mRNA_E-siliculosus-1a_M_contig9.16942.1 ID=mRNA_E-siliculosus-1a_M_contig9.16942.1|Name=mRNA_E-siliculosus-1a_M_contig9.16942.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1608bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:220255..223431+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGCCGTACTTTGTCCGGGCCGTCCGATTGGTGATCGCGTACAATCGCAA
CTATCGGCTACAGTACGCCAAATTCGTGAAGAGAAAACATGCAACGGGTG
TTTTGGTCCTGACCGCCATTGGGCTCACCATCCGAGCCGGGCTGTTCTTC
GGGGACGATCCTGCACACTACTCGAGATGCCGTACTTTGTCCGGGCCGTC
CGATTGGTGATCGCGTACAATCGCAACTATCGGCTACAGTACGCCAAATT
CGTGAAGAGAAAACATGCAACGGGTGTTTTGGTCCTGACCGCCATTGGGC
TCACCATCCGAGCCGGGCTGTTCTTCGGGGACGATCCTGCACACTACTCG
AGCTTGTTGCTTCCCATGGCGAGAGCTCACCGTGGTGGGGTGCAGGAATG
GTTCAGGGCCACCGTGGTTCCCGTTGAAGAAGTCTTTATGGTGCAGGCGT
CGGATGAGTGCGGCGTGTTACGGCTCGCAAGCGGCGGTGGAGAACTGGCT
CAGCAGTTTGGAAAGTTCTGTCGGGAAAACTTGTGCATGGAGAGCTGGGA
TTTCCTCGTCGACGTTGTCCGCTACGAACGGATTGCGCCAAGCCTCCTTG
TTGCTTCCCATGGCGAGAGCTCACCGTGGTGGGGTGCAGGAATGGTTCAG
GGCCACCGTGGTTCCCGTTGAAGAAGTCTTTATGGTGCAGGCGTCGGATG
AGTGCGGCGTGTTACGGCTCGCAAGCGGCGGTGGAGAACTGGCTCAGCAG
TTTGGAAAGTTCTGTCGGGAAAACTTGTGCATGGAGAGCTGGGATTTCCT
CGTCGACGTTGTCCGCTACGAACGGATTGCGCCAAGCCTCATCGCGAACC
ACCCTGAGGACGAGCAGTTCAACTCTTTCTTGCTCATCCTGAACCAATAC
CTGCTTCCCACGTCACCCGACGAGATCAACATATCGAGCTCGATGAGCAA
ACGCATCTTGTCGTTCGGAACAAGATCGCGAACCACCCTGAGGACGAGCA
GTTCAACTCTTTCTTGCTCATCCTGAACCAATACCTGCTTCCCACGTCAC
CCGACGAGATCAACATATCGAGCTCGATGAGCAAACGCATCTTGTCGTTC
GGAACAAGGGAGGTCTTCAACGAGCTCAGCCTCGAGGAGCGGGTCGGCAT
ACTAAAGGAACCCTTCGACGAGATCGTCCGGATGCTGGAGCAAAATCTGC
TAAACAAGTTCCAGAGACGCGTAGCTCTGGACCGGGGGAGGTCTTCAACG
AGCTCAGCCTCGAGGAGCGGGTCGGCATACTAAAGGAACCCTTCGACGAG
ATCGTCCGGATGCTGGAGCAAAATCTGCTAAACAAGTTCCAGAGACGCGT
AGCTCTGGACCGGGAGGCCCAGCTGCTCACGGCTGCGGATGGGGATGTGG
ATCTGGTGACCGTTATGAAGGCATCGGACCATCGCGTTGGTAGTTCGAAG
CCGGAAATATCTGTTTCCGGATACACTTTCGGCTAAAGGCCCAGCTGCTC
ACGGCTGCGGATGGGGATGTGGATCTGGTGACCGTTATGAAGGCATCGGA
CCATCGCGTTGGTAGTTCGAAGCCGGAAATATCTGTTTCCGGATACACTT
TCGGCTAA
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