mRNA_E-siliculosus-1a_M_contig89.16878.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig89.16878.1 vs. uniprot
Match: D8LSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK2_ECTSI) HSP 1 Score: 276 bits (707), Expect = 5.550e-93 Identity = 139/144 (96.53%), Postives = 139/144 (96.53%), Query Frame = 1
Query: 172 MGSAGLSRSRGDLERLAESIDIYHVHGQIFIHSTFDGIAKPKIVPTGDQARAFVEGMRAGTGSLEELLTTALSELCKVKPEGLDAVRWLAEWLLENNPNKPKVAHADDERDGGEDGDEAGGGEAALGDGPVVGMVATVESRLQE 603
MGSAGLSRSRGDLERLAESI IYHVHGQIFIHSTFDGIAKPKIVPTGDQARAFVEGMRAGTGSLEELLTT SELCKVKPEGLDAVRWLAEWLLENNPNKPKVAHADDERD GEDGDEAGGGE ALGDGPVVGMVATVESRLQE
Sbjct: 1 MGSAGLSRSRGDLERLAESIGIYHVHGQIFIHSTFDGIAKPKIVPTGDQARAFVEGMRAGTGSLEELLTTPFSELCKVKPEGLDAVRWLAEWLLENNPNKPKVAHADDERDSGEDGDEAGGGETALGDGPVVGMVATVESRLQE 144
BLAST of mRNA_E-siliculosus-1a_M_contig89.16878.1 vs. uniprot
Match: A0A7S2XW71_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW71_9STRA) HSP 1 Score: 175 bits (443), Expect = 1.500e-52 Identity = 86/151 (56.95%), Postives = 111/151 (73.51%), Query Frame = 1
Query: 31 LYTVGRKLEDGAMYILHLEDMYPAGVLVQAYKQETSDRYTLSVSEGEMGSAGLSRSRGDLERLAESIDIYHVHG-QIFIHSTFDGIAKPKIVPTGDQARAFVEGMRAGTGSLEELLTTALSELCKVKPEGLDAVRWLAEWLLENNPNKPKV 480
LY GR+L DG MYI+ + D+ PAGVL++AY Q TS Y LS SE E+ AGLSR + DL+ L ESID+ + G + F+ S+ GI PK++P G +A F++ + AGT +L ELLTTALSELCKVKP GLDAVRWL +WLLENNPN+P++
Sbjct: 6 LYVQGRQLSDGGMYIISVTDLDPAGVLIKAYNQVTSSEYYLSPSEDELEEAGLSRQKEDLKTLVESIDLTELSGGRTFLRSSLAGIKDPKVIPQGAEAAQFIKSIPAGTDTLPELLTTALSELCKVKPSGLDAVRWLGQWLLENNPNQPQI 156
BLAST of mRNA_E-siliculosus-1a_M_contig89.16878.1 vs. uniprot
Match: A0A836CDF1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDF1_9STRA) HSP 1 Score: 159 bits (402), Expect = 1.620e-46 Identity = 79/151 (52.32%), Postives = 104/151 (68.87%), Query Frame = 1
Query: 52 LEDGAMYILHLEDMYPAGVLVQAYKQETSDRYTLSVSEGEMGSAGLSRSRGDLERLAESIDIYHVHGQIFIHSTFDGIAKPKIVPTGDQARAFVEGMRAGTGSLEELLTTALSELCKVKPEG---LDAVRWLAEWLLENNPNKPKVAHADD 495
L+DG MY + + DM PAGV+++A T+ Y L +E E+ +A L R+ DL RLAES+D+ V G FI+S+ GI KPKI+PTG+ A+ F+ G+ GSL +LLTT LSELCKVKP+G +DAVRWL EWLL NNPN+P V +D
Sbjct: 1 LQDGDMYTIGIFDMEPAGVVIRALNNATAKYYALGPTESELAAAKLGRNESDLARLAESVDLLEVGGTTFIYSSLPGICKPKIIPTGETAKDFMNGLTLRDGSLVQLLTTGLSELCKVKPQGPGGIDAVRWLGEWLLANNPNQPAVEEPED 151
BLAST of mRNA_E-siliculosus-1a_M_contig89.16878.1 vs. uniprot
Match: A0A7S2WUZ4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUZ4_9STRA) HSP 1 Score: 157 bits (397), Expect = 1.610e-45 Identity = 79/163 (48.47%), Postives = 108/163 (66.26%), Query Frame = 1
Query: 7 PWAKKSASLYTVGRKLEDGAMYILHLEDMYPAGVLVQAYKQETSDRYTLSVSEGEMGSAGLSRSRGDLERLAESIDIYHVHGQIFIHSTFDGIAKPKIVPTGDQARAFVEGMRAGTGSLEELLTTALSELCKVKPEGLDAVRWLAEWLLENNPNKPKVAHADD 495
P K A++YTVGR+L DG MYI + D+ PAG+L++AY TS T S SE E+ +A ++R+ L +L +S DI G + S GI KPK+VP GD R F+ AG+ +L ELLTTAL+ELCK KP L+AVRWL +WL++NNPN+P+VA ++
Sbjct: 7 PPRMKKAAIYTVGRQLNDGDMYIFSVYDLEPAGLLIRAYCASTSSELTTSPSESELYAASITRAEKHLAQLCDSYDIVTKGGTPLLESNLTGINKPKLVPQGDGVRQFITATPAGSETLPELLTTALTELCKQKPAKLEAVRWLGQWLIDNNPNQPQVAEPEE 169
BLAST of mRNA_E-siliculosus-1a_M_contig89.16878.1 vs. uniprot
Match: A0A8J2WSR2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WSR2_9STRA) HSP 1 Score: 152 bits (384), Expect = 1.490e-43 Identity = 72/161 (44.72%), Postives = 108/161 (67.08%), Query Frame = 1
Query: 13 AKKSASLYTVGRKLEDGAMYILHLEDMYPAGVLVQAYKQETSDRYTLSVSEGEMGSAGLSRSRGDLERLAESIDIYHVHGQIFIHSTFDGIAKPKIVPTGDQARAFVEGMRAGTGSLEELLTTALSELCKVKPEGLDAVRWLAEWLLENNPNKPKVAHADD 495
A + ++Y R L+D +YIL + D P+G+LV+AY+Q S Y + ++E E+ +A LSRS+ L +LAES+ + + G++ + S+ GI KPK++P+GD R F+ +AG +L + L+ ALSELCK KP GLDAVRWL +W+L+NNPN+P V D
Sbjct: 2 AGRKVAIYNCARALDDNDIYILQMFDTSPSGLLVKAYRQTESVEYFMPITESELDNAALSRSQQALSKLAESLSLVELSGKLVLMSSITGIIKPKVLPSGDGVRQFIGRTKAGRDTLSDFLSEALSELCKEKPVGLDAVRWLGQWILKNNPNQPTVEEPTD 162
BLAST of mRNA_E-siliculosus-1a_M_contig89.16878.1 vs. uniprot
Match: A0A024UQM8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQM8_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 4.470e-20 Identity = 48/142 (33.80%), Postives = 81/142 (57.04%), Query Frame = 1
Query: 61 GAMYILHLEDMYPAGVLVQAYKQETSDRYTLSVSEGEMGSAGLSRSRGDLERLAESIDIYHVHG--QIFIHSTFDGIAKPKIVPTGDQARAFVEGMRAGTGSLEELLTTALSELCKVKPEGLDAVRWLAEWLLENNPNKPKV 480
G +++ L D P+GV+ A T++++T + S E+ +A L+++ D L ES+ + G ++ +HS+ G+ P + T A+ ++ +AG + ++L+ L LC KP GL A+ L +WLLENNPNKPKV
Sbjct: 16 GEDHVVTLYDTEPSGVVCMAVNSATTNKFTRAFSSAELKAAKLTKTPSDYFHLVESLYFVAIGGVNELQLHSSLPGMRPPAAIATATAAQHYLTNAQAGNENFTQVLSRGLIMLCNDKPMGLQAITRLGKWLLENNPNKPKV 157
BLAST of mRNA_E-siliculosus-1a_M_contig89.16878.1 vs. uniprot
Match: W4HE35_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HE35_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 1.210e-19 Identity = 51/142 (35.92%), Postives = 79/142 (55.63%), Query Frame = 1
Query: 61 GAMYILHLEDMYPAGVLVQAYKQETSDRYTLSVSEGEMGSAGLSRSRGDLERLAESIDIYHVHG--QIFIHSTFDGIAKPKIVPTGDQARAFVEGMRAGTGSLEELLTTALSELCKVKPEGLDAVRWLAEWLLENNPNKPKV 480
G +++ L D PAGVL T++RYT + S E+ +A L++++ D L ES+ G ++ +HS+ G+ P T A+ ++ ++G ++L+ L LCK KP GL A+ L +WLLENNPNKPKV
Sbjct: 16 GEDHVVALYDTEPAGVLCTVINTTTTNRYTRAFSADELKAAKLTKTQADYFHLVESLFFAPSGGVNELQLHSSLAGMRPPVAFATAAAAQHYLTNAQSGNERFSQVLSRGLMMLCKDKPMGLQAITRLGKWLLENNPNKPKV 157
BLAST of mRNA_E-siliculosus-1a_M_contig89.16878.1 vs. uniprot
Match: A0A6G0XFQ6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XFQ6_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 4.060e-17 Identity = 45/143 (31.47%), Postives = 80/143 (55.94%), Query Frame = 1
Query: 58 DGAMYILHLEDMYPAGVLVQAYKQETSDRYTLSVSEGEMGSAGLSRSRGDLERLAESIDIYHVHG--QIFIHSTFDGIAKPKIVPTGDQARAFVEGMRAGTGSLEELLTTALSELCKVKPEGLDAVRWLAEWLLENNPNKPKV 480
+G + + L D P G++ T+ +Y + S + + +++++ D RLAES+ + G ++ IHS+ G+++P+ + T + A ++ +G ++L+ L LCK KP GL AV L +WL+ENNPN+PKV
Sbjct: 16 EGNDHSISLYDAEPGGLVAIVVNTGTNAKYIRAFSTANLRATQVTKTKPDYYRLAESLYLAPAGGTHELQIHSSLRGMSQPEAIATAEAAHHYLTNASSGPEKFTQVLSRGLVMLCKDKPMGLQAVTRLGKWLVENNPNRPKV 158
BLAST of mRNA_E-siliculosus-1a_M_contig89.16878.1 vs. uniprot
Match: A0A485LA18_9STRA (Aste57867_18178 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LA18_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 1.840e-14 Identity = 47/134 (35.07%), Postives = 73/134 (54.48%), Query Frame = 1
Query: 82 LEDMYPAGVLVQAYKQETSDRYTLSVSEGEMGSAGLSRSRGDLERLAESIDIYHVHGQ-IFIHSTFDGIAKPKIVPTGDQARAFVEGMRAGTGSLEELLTTALSELCKVKPEGLDAVRWLAEWLLENNPNKPKV 480
L D P G++ A + +Y + S E+ +A L++S D L ES+ + + +HS+ G+ P+ + T A ++ + AG+ L ++L+ L LCK KP GL A+ L +WLLENNPNKPKV
Sbjct: 59 LYDTEPGGLVCIAVNTHNNIKYVRTFSYAELRAAKLTKSTADYFHLVESLYFTPTGTKDLLLHSSLAGMRTPEPLATAAAADHYLNNVAAGS-KLTQVLSKGLIALCKDKPMGLQAITRLGKWLLENNPNKPKV 191
BLAST of mRNA_E-siliculosus-1a_M_contig89.16878.1 vs. uniprot
Match: A0A3L6V9Q6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V9Q6_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 4.600e-10 Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 1
Query: 181 AGLSRSRGDLERLAESIDIYHVHG--QIFIHSTFDGIAKPKIVPTGDQARAFVEGMRAGTGSLEELLTTALSELCKVKPEGLDAVRWLAEWLLENNPNKPKV 480
A L++++ D L ES+ G ++ +HS+ G+ P T A+ ++ ++G ++L+ L LCK KP GL A+ L +WLLENNPNKPKV
Sbjct: 1 AKLTKTQADYFHLVESLFFAPSGGVNELQLHSSLAGMRPPVAFATAAAAQHYLTNAQSGNERFSQVLSRGLMMLCKDKPMGLQAITRLGKWLLENNPNKPKV 102 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig89.16878.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig89.16878.1 >prot_E-siliculosus-1a_M_contig89.16878.1 ID=prot_E-siliculosus-1a_M_contig89.16878.1|Name=mRNA_E-siliculosus-1a_M_contig89.16878.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=202bp MTPWAKKSASLYTVGRKLEDGAMYILHLEDMYPAGVLVQAYKQETSDRYTback to top mRNA from alignment at E-siliculosus-1a_M_contig89:226777..228887- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig89.16878.1 ID=mRNA_E-siliculosus-1a_M_contig89.16878.1|Name=mRNA_E-siliculosus-1a_M_contig89.16878.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2111bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig89:226777..228887- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig89:226777..228887- >mRNA_E-siliculosus-1a_M_contig89.16878.1 ID=mRNA_E-siliculosus-1a_M_contig89.16878.1|Name=mRNA_E-siliculosus-1a_M_contig89.16878.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1212bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig89:226777..228887- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |