mRNA_E-siliculosus-1a_M_contig89.16867.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig89.16867.1
Unique NamemRNA_E-siliculosus-1a_M_contig89.16867.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig89.16867.1 vs. uniprot
Match: A0A835YZX1_9STRA (Flagellar C1a complex subunit C1a-32-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZX1_9STRA)

HSP 1 Score: 155 bits (392), Expect = 1.240e-43
Identity = 68/135 (50.37%), Postives = 97/135 (71.85%), Query Frame = 2 
Query:  407 EKERVVLDFHYYNYAFCKERRFDARATSTFLSIMKDILDEDMRTNDSTSSLRKSFNRFEELILRHAVDRPPWTTGVLSPKDIGAITDYVATRQDYYRHFTLYKHIFTTKINVVIEQRHPHGVEEPPLAPPLGGAL 811
            EK  V++DFH YNYAFCKE+RFD + TST++SIM D+L +D+  +D  S  + SF+RF +LILRH V+RPPW+ G+ + +D+  IT+YV     YYRH+ +YKH+FT ++   + QR+ HG EEP + PPL  A+
Sbjct:   15 EKTEVLVDFHLYNYAFCKEQRFDTQKTSTYMSIMTDVLKQDLSQDDPVSGQQASFDRFRDLILRHCVERPPWSVGIFTLEDVAGITEYVVN--SYYRHYRIYKHLFTARVETTLTQRNLHGTEEPRIPPPLCEAM 147
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BLAST of mRNA_E-siliculosus-1a_M_contig89.16867.1 vs. uniprot
Match: A0A6V1RZL7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RZL7_HETAK)

HSP 1 Score: 139 bits (351), Expect = 6.310e-37
Identity = 75/216 (34.72%), Postives = 116/216 (53.70%), Query Frame = 2 
Query:  209 MATSVAWKHFSPEQISCLEAALEHEQCKTLLALYLGLGGANCLEDGRTEGRGARIDYASARTNSLTEKERVVLDFHYYNYAFCKERRFDARATSTFLSIMKDILDEDMRTNDSTSSLRKSFNRFEELILRHAVDRPPWTTGVLSPKDIGAITDYVATRQDYYRHFTLYKHIFTTKINVVIEQRHPHGVEEPPLAPPLGGALMMINVPAVAGEEGDQ 856
            M  SV WKHF+  Q+  LEAA +  +CK LL  YL +  A    D                      ++ ++LDFH+YNYAFCK+  F     STFLSIMKD +D+D   +D+ ++++ SF + ++ +L H ++RPPW+ G+  P+D+  ++D+V     YYR F LYK++FT ++ V   Q   + V    +  PL   L  +   +V   E D+
Sbjct:    1 MTDSVLWKHFTEAQLRELEAARDPVECKGLLKSYLKIEDAGFDRD----------------------RQDILLDFHFYNYAFCKKLGFGPTKISTFLSIMKDTIDKDFSQHDAVNTIKASFEQLKKTLLMHCIERPPWSVGIFQPEDLQLLSDFVLN--GYYRQFRLYKYLFTRRVQVEFTQTLSNDVGCARMPRPLAEGLPQVVKTSVGEGEDDE 192
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BLAST of mRNA_E-siliculosus-1a_M_contig89.16867.1 vs. uniprot
Match: A0A7S2SS91_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS91_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.530e-28
Identity = 78/215 (36.28%), Postives = 108/215 (50.23%), Query Frame = 2 
Query:  209 MATSVAWKHFSPEQISCLEAALEHEQCKTLLALYLGLGGANCLEDGRTEGRGARIDYASARTNSLTEKERVVLDFHYYNYAFCKERRFDARATSTFLSIMKDILDEDMRTNDSTSSLRKSFNRFEELILRHAVDRPPWTTGVLSPKDIGAITDYVATRQDYYRHFTLYKHIFTTKINVVIEQRHPHGVEEPPLA-PPLGGALMMINVPAVAGEEG 850
            MA S+ +       +  L    E    K LL   LG+      ED R               +   E++ VV +F++Y YAFCKE  FDA  TSTF+SI K    +D   ++ +  +++SF RF+EL+L HAV+R PW   V S  D+  I  Y+     Y+RHF +YK IFT K+ V ++Q  PH VE P     PL  A+    +PA AG  G
Sbjct:    1 MAESLEFHDLPSGTVELLHVTYEPAAVKKLLRENLGV------EDDR---------------DLSAEQKEVVEEFYFYCYAFCKESGFDASKTSTFMSIAKATFHDDRSRDEFSCGMKQSFARFKELVLSHAVNRSPWAVRVFSEDDVARIISYMLN--SYFRHFKMYKLIFTRKLQVTLDQSEPHLVEPPRRNFEPLERAIFD-PLPASAGSRG 191
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BLAST of mRNA_E-siliculosus-1a_M_contig89.16867.1 vs. uniprot
Match: W2PIE1_PHYPN (Uncharacterized protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PIE1_PHYPN)

HSP 1 Score: 117 bits (293), Expect = 2.950e-28
Identity = 69/212 (32.55%), Postives = 107/212 (50.47%), Query Frame = 2 
Query:  209 MATSVAWKHFSPEQISCLEAALEHEQCKTLLALYLGLGGANCLEDGRTEGRGARIDYASARTNSLTEKERVVLDFHYYNYAFCKERRFDARATSTFLSIMKDILDEDMRTNDSTSSLRKSFNRFEELILRHAVDRPPWTTGVLSPKDIGAITDYVATRQDYYRHFTLYKHIFTTKINVVIEQRHPHGVEEPPLAPPLGGALMMINVPAVAGE 844
            M  ++ WKH S  +++ L      + CK+ LA    L     L D                     EK+R +LDFH +NY+FC++R F+   TS FL I + ++  D   +DST+ L+ SF  F+ ++L H+V+R P + G+ S +++  I DYVA    YYRHF LYK I+T   ++   QR  + V+ P    PL    ++   P  + E
Sbjct:    1 MTEAIVWKHASERELAQLATRHSVDDCKSALAEIFELD----LSD---------------------EKQRFLLDFHLHNYSFCRQRHFELNQTSVFLGICQTLMKRDF-ASDSTTDLKSSFEFFQAMLLTHSVNRSPKSVGIFSREEVATIVDYVAN--SYYRHFQLYKCIYTPYYHLHFVQREINDVQTPKALRPLSQGFLLTAKPMPSDE 184
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig89.16867.1 vs. uniprot
Match: A0A329RNJ7_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RNJ7_9STRA)

HSP 1 Score: 103 bits (257), Expect = 6.790e-23
Identity = 67/222 (30.18%), Postives = 103/222 (46.40%), Query Frame = 2 
Query:  209 MATSVAWKHFSPEQISCLEAALEHEQCKTLLALYLGLGGANCLEDGRTEGRGARIDYASARTNSLTEKERVVLDFHYYNYAF----------CKERRFDARATSTFLSIMKDILDEDMRTNDSTSSLRKSFNRFEELILRHAVDRPPWTTGVLSPKDIGAITDYVATRQDYYRHFTLYKHIFTTKINVVIEQRHPHGVEEPPLAPPLGGALMMINVPAVAGE 844
            M  ++ WKH S  +++ L      + CK+ LA    L  A+                         EK+  +LDFH +NY++          C +R F    TS  L I + ++  D    DST++L+ SF+ F+ ++L H+V+R P + G+ S +++ AI DYV     YYRHF LYK I+T   +V   QR  + V+ P    PL    +    P   GE
Sbjct:    1 MTEAIVWKHASERELAQLATRHSVDDCKSALAEIFELDLAD-------------------------EKQSFLLDFHLHNYSYPFFLHCAMDYCLQRHFQLNQTSVLLGICQTLMKRDF-ARDSTTNLKSSFDFFQAILLTHSVNRSPKSVGIFSREEVAAIVDYVTN--SYYRHFQLYKCIYTPYYHVHFVQREINDVQTPKTPRPLSQGFLHTVKPMPPGE 194
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig89.16867.1 vs. uniprot
Match: A0A6A3P3Y5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3P3Y5_9STRA)

HSP 1 Score: 101 bits (251), Expect = 4.570e-22
Identity = 70/235 (29.79%), Postives = 110/235 (46.81%), Query Frame = 2 
Query:  209 MATSVAWKHFSPEQISCLEAALEHEQCKTLLALYLGLGGANCLEDGRTEGRGARIDYASARTNSLTEKERVVLDFHYYNYAFCKE----RRFDARATSTFLSIMKDILDEDMRTNDSTSSLRKSFNRFEELILRHAVDRPPWTTGVLSPKDIGAITDYVATRQDYYRHFTLYKHIFTTKINVVIEQRHPHGVEEPPLAPPLGGALMMIN--VPAVAGEEGDQDAMAIGTDDVISP 895
            M  ++ WKH +  +++ L      + CK+ LA    L                  D++        EK+  +LDFH +NY++       R F    TS FL I + ++  D    +ST+ L+ SF+ F+E++L H+V+R P + GV S +++ AI DYV     YYRHF LYK I+T   +V + QR  + V+ P    PL    +     +P+V   E      A   D +  P
Sbjct:    1 MTEAIVWKHATENELAKLATRHSVDDCKSALAEIFDL------------------DFSD-------EKQSFLLDFHLHNYSYPSPTIHGRHFQLNQTSVFLGICQTLMRRDF-ARESTTDLKSSFDYFQEILLTHSVNRSPKSVGVFSREEVTAIVDYVTN--SYYRHFQLYKCIYTPYYHVHLVQREINDVQTPKAPRPLSHGFLHSTRPLPSVESTETPDKDTATAADTLEPP 207
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig89.16867.1 vs. uniprot
Match: A0A8J2SIJ6_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SIJ6_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 2.480e-19
Identity = 51/135 (37.78%), Postives = 75/135 (55.56%), Query Frame = 2 
Query:  407 EKERVVLDFHYYNYAFCKERRFDARATSTFLSIMKDILDEDMRTNDSTSSLRKSFNRFEELILRHAVDRPPWTTGVLSPKDIGAITDYVATRQDYYRHFTLYKHIFTTKINVVIEQRHPHGVEEPPLAPPLGGAL 811
            ++  +V D++++ YAF K + FDA+   T LSI ++I D D  TN  + S+ KSF R E  +LRHA  RPP    +    D+  I +++    +Y+RH+ LYK IFT + + V  Q  P  VE P    PL   L
Sbjct:   73 QQREIVQDYYFHLYAFAKAKGFDAKKAGTLLSICREIFDADAATNAPSESMEKSFERLEAQLLRHAEFRPPKALDIFDEGDVQEIIEWML--HNYFRHYKLYKAIFTKRRSDVFSQAAPFAVEAPRDPLPLSSFL 205
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BLAST of mRNA_E-siliculosus-1a_M_contig89.16867.1 vs. uniprot
Match: A0A7S2CZG1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CZG1_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 3.490e-17
Identity = 43/98 (43.88%), Postives = 63/98 (64.29%), Query Frame = 2 
Query:  536 TNDSTSSLRKSFNRFEELILRHAVDRPPWTTGVLSPKDIGAITDYVATRQDYYRHFTLYKHIFTTKINVVIEQRHPHGVEEPPLAPPLGGALMMINVP 829
            +N ST ++ +SF  F++L+  HAVDRPP    + S +D+  IT+++     Y+RHF LYK+IFT K+ V + QR P+ +E PP   PLG AL + N P
Sbjct:    1 SNKSTCTMTRSFELFKKLMFTHAVDRPPLFVKIFSEEDVKLITEFMLN--GYFRHFKLYKYIFTKKLKVTLVQRTPNQIEIPPQPRPLGEALPLENKP 96
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig89.16867.1 vs. uniprot
Match: T0R735_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R735_SAPDV)

HSP 1 Score: 87.8 bits (216), Expect = 4.500e-17
Identity = 58/166 (34.94%), Postives = 87/166 (52.41%), Query Frame = 2 
Query:  392 TNSLTEKERVVLDFHYYNYAFCKERRFDARATSTFLSIMKDIL--------DEDMRTNDSTSSLRKSFNRFEELILRHAVDRPPWTTGVLSPKDIGAITDYVATRQDYYRHFTLYKHIFTTKINVVIEQRHPHGVEE-PPLAPPLGGALMMINVPAVAGEEGDQDA 862
            T+       +V+D + Y YAF K+  F A  TST L+I+  ++        ++D+RT     +L  SF+RF+ ++LRH+V+RPP +TG+    D+  I DYV     YYRHF LY+ IF  + ++ I Q     V    P+AP + G      +PA    E   DA
Sbjct:   44 THKAPAPMHLVVDMYMYLYAFTKQHEFSAERTSTVLAIVHSLVLTDLFLHGEKDLRT---LPTLPASFSRFQAMLLRHSVERPPMSTGIFDAADVSRIVDYVT--HTYYRHFHLYQSIFLPQTHLSIVQVACMDVASVKPVAPLMVGLKQHPPLPAPVAHETIVDA 204
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig89.16867.1 vs. uniprot
Match: K3XA92_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XA92_GLOUD)

HSP 1 Score: 85.9 bits (211), Expect = 9.200e-17
Identity = 48/127 (37.80%), Postives = 74/127 (58.27%), Query Frame = 2 
Query:  458 KERRFDARATSTFLSIMKDILDEDMRTNDSTSSLRKSFNRFEELILRHAVDRPPWTTGVLSPKDIGAITDYVATRQDYYRHFTLYKHIFTTKINVVIEQRHPHGVEEPPLAPPLGGALMMINVPAVA 838
            ++R F  R TS  L I + ++D D    DS+S+L  SF+ F+ L+L H+V R P + G+ S +++ AI D+V     Y+RHF LYK I+T   +  I Q+  +GV+ P    PL  A++ +  P VA
Sbjct:   29 RQRNFTHRQTSVLLGICQSLMDRDFCV-DSSSNLNSSFSHFQTLLLTHSVQRSPKSVGIFSVQEVAAIVDFVT--HTYFRHFHLYKGIYTPYYHTHIVQKAVNGVQVPQQPRPLADAILHLESPFVA 152
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig89.16867.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YZX1_9STRA1.240e-4350.37Flagellar C1a complex subunit C1a-32-domain-contai... [more]
A0A6V1RZL7_HETAK6.310e-3734.72Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2SS91_9STRA1.530e-2836.28Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W2PIE1_PHYPN2.950e-2832.55Uncharacterized protein n=7 Tax=Phytophthora paras... [more]
A0A329RNJ7_9STRA6.790e-2330.18Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A6A3P3Y5_9STRA4.570e-2229.79Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A8J2SIJ6_9STRA2.480e-1937.78Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S2CZG1_9STRA3.490e-1743.88Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
T0R735_SAPDV4.500e-1734.94Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
K3XA92_GLOUD9.200e-1737.80Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig89contigE-siliculosus-1a_M_contig89:127676..132975 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size786
Model size907
Exons7
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EggNOG OGs29WM8@1,2S7XE@2759
EggNOG free text desc.Flagellar C1a complex subunit C1a-32
Preferred nameCCDC189
Seed eggNOG ortholog44056.XP_009037610.1
Seed ortholog evalue5.8e-21
Seed ortholog score108.2
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig89.16867.1prot_E-siliculosus-1a_M_contig89.16867.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig89 127797..132975 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936358.9904854-UTR-E-siliculosus-1a_M_contig89:127675..1277961622936358.9904854-UTR-E-siliculosus-1a_M_contig89:127675..127796Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig89 127676..127796 +
1696251041.8216977-UTR-E-siliculosus-1a_M_contig89:127675..1277961696251041.8216977-UTR-E-siliculosus-1a_M_contig89:127675..127796Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig89 127676..127796 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936359.0106373-CDS-E-siliculosus-1a_M_contig89:127796..1278071622936359.0106373-CDS-E-siliculosus-1a_M_contig89:127796..127807Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig89 127797..127807 +
1696251041.835139-CDS-E-siliculosus-1a_M_contig89:127796..1278071696251041.835139-CDS-E-siliculosus-1a_M_contig89:127796..127807Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig89 127797..127807 +
1622936359.027053-CDS-E-siliculosus-1a_M_contig89:128661..1287401622936359.027053-CDS-E-siliculosus-1a_M_contig89:128661..128740Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig89 128662..128740 +
1696251041.8465018-CDS-E-siliculosus-1a_M_contig89:128661..1287401696251041.8465018-CDS-E-siliculosus-1a_M_contig89:128661..128740Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig89 128662..128740 +
1622936359.0457819-CDS-E-siliculosus-1a_M_contig89:129333..1294161622936359.0457819-CDS-E-siliculosus-1a_M_contig89:129333..129416Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig89 129334..129416 +
1696251041.8572774-CDS-E-siliculosus-1a_M_contig89:129333..1294161696251041.8572774-CDS-E-siliculosus-1a_M_contig89:129333..129416Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig89 129334..129416 +
1622936359.0684583-CDS-E-siliculosus-1a_M_contig89:129938..1301701622936359.0684583-CDS-E-siliculosus-1a_M_contig89:129938..130170Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig89 129939..130170 +
1696251041.8683515-CDS-E-siliculosus-1a_M_contig89:129938..1301701696251041.8683515-CDS-E-siliculosus-1a_M_contig89:129938..130170Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig89 129939..130170 +
1622936359.0875344-CDS-E-siliculosus-1a_M_contig89:130709..1308701622936359.0875344-CDS-E-siliculosus-1a_M_contig89:130709..130870Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig89 130710..130870 +
1696251041.8794415-CDS-E-siliculosus-1a_M_contig89:130709..1308701696251041.8794415-CDS-E-siliculosus-1a_M_contig89:130709..130870Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig89 130710..130870 +
1622936359.1097376-CDS-E-siliculosus-1a_M_contig89:132010..1321461622936359.1097376-CDS-E-siliculosus-1a_M_contig89:132010..132146Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig89 132011..132146 +
1696251041.8911448-CDS-E-siliculosus-1a_M_contig89:132010..1321461696251041.8911448-CDS-E-siliculosus-1a_M_contig89:132010..132146Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig89 132011..132146 +
1622936359.1284761-CDS-E-siliculosus-1a_M_contig89:132891..1329751622936359.1284761-CDS-E-siliculosus-1a_M_contig89:132891..132975Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig89 132892..132975 +
1696251041.9021587-CDS-E-siliculosus-1a_M_contig89:132891..1329751696251041.9021587-CDS-E-siliculosus-1a_M_contig89:132891..132975Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig89 132892..132975 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig89.16867.1

>prot_E-siliculosus-1a_M_contig89.16867.1 ID=prot_E-siliculosus-1a_M_contig89.16867.1|Name=mRNA_E-siliculosus-1a_M_contig89.16867.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=262bp
MLEVCSCRTWCCSHIPHKQGGTHDAKEGPMATSVAWKHFSPEQISCLEAA
LEHEQCKTLLALYLGLGGANCLEDGRTEGRGARIDYASARTNSLTEKERV
VLDFHYYNYAFCKERRFDARATSTFLSIMKDILDEDMRTNDSTSSLRKSF
NRFEELILRHAVDRPPWTTGVLSPKDIGAITDYVATRQDYYRHFTLYKHI
FTTKINVVIEQRHPHGVEEPPLAPPLGGALMMINVPAVAGEEGDQDAMAI
GTDDVISPEEE*
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mRNA from alignment at E-siliculosus-1a_M_contig89:127676..132975+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig89.16867.1 ID=mRNA_E-siliculosus-1a_M_contig89.16867.1|Name=mRNA_E-siliculosus-1a_M_contig89.16867.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5300bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig89:127676..132975+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGAACCATCACCCTGCGGTAGCGGGGAACGCCCAACTCATTCCAATTTC
ATATAAATAGTACTTCCACGGTACACACGCAGTGCTAACCAACTGCGTCC
GCGGACAGCGAGCTGCGTGGTATGTTGGAGGTGTGGAGGCGCGTATGTGT
ACTGTTTAAATATGGATCGACTGGGCTCAATTACAGACCAGTGTAAAGCC
GTCAGTCTTCCGGTCGGCGTGAAGCGAACACCCTGTACTGCTGTACTGTA
TGTACTGTACTCAGCTGGTACTCTCTGAATGTTCTCTCAAAGCATCGATC
TCTACAATTTCCTGACTGAGTATACATCTTCAAGTCGCAAGGTTGTGAGG
GAACCGCCCGAGCCATGATGACGACTGCCTTGCTACAACGGAGCACATAC
ATATGTACCAGTAGCATGCTCTGCTGGTGGTGAATGGTTTTCTCTCTGCT
GTACCTCTAAAACGAGACTCCCAGGTTTCGTGTACCGCTTCCCCTCGGCT
ATCACCCAGCGATGCAAGTCACCTTGGGGTTGATGGGGGCGCATAATGCC
CTGCGTTCTGGAAACTAGATGATGGCCGAACGTACTCCCAGATGGTATCG
TCGCCCCCGTGGCTCATTTTGCCGAGGTGGCGCGCGTTCCTCCCCAAGAG
CGGATGGTCTAACACGTCTATACCCCGTACGCCTCCGCAGTGTACTCTGG
CCTCGCAGTATTCCTCTGTGGTTGGAAAGTATCAAGTGAAGCCCAAAAGG
TACCAAGGCCTTGCCTTCACACCACTACAGAACATGTTCCATGAGACTAT
GAGCACCTGAACACATAGCGGTATGCCTGTATGCCTGTATGTCTGTCGCC
TGTCACTGCAACATGTCAGGCGGGCAGGCGGGCGGGGAAATCATGTGTGA
ACCGTCAGCAATCGCCCCGCATTTTCCGATCTTATTCCCCCGCACTTCAG
TCAGGTTTCCGAGTAACGAGTAACAGAGTAAGATAGATGCTCCTGCCGCA
CGTGGTGCTGCAGTCATATTCCGCACAAGCAGGGAGGCACCCACGACGCG
AAGGAGGGTCCTATGGTAAGGACTTGCTGGTGGTGCTAGAATCGCTTGAC
CCACATGTTTCGTTCAGCAAAGGACGGATAGTCGTATTTAGGATAGCCGA
CACGCGACGCGCACGTCCGGGCGTGACAACTTATTTCAGCGTGAGTATAT
GGTCTAGACGACGAAGCTCCAGTTGGGCGGTAGATTGAGGTTGCCAGCGA
ATTGCGCTCTATAGTACGTTAGACTGGCTGGACTATGCTCTATGAATGCC
ATACTTTTCATACCGCTGGGACATTGTCGGCGGTCTCGACTCCACTTCGA
AACTGCATGCGCGTGCTGCTGCTGTCGGGCACGCGCTGCTGTACGCTATG
GACTACAGCGGTAACAAGGAACGCGATGGTCCGTTGTGTCGTGTGTATTT
ATTTAATATTATTATGGTCGACATCGCTAATCGACTGGCCAATGAAAACA
CGTCAGCCTGTGTATGCGTATGCATAGGAAAAGTACCCGTGTTTGTACGT
ACTTCGACTACAATTGTAGATGAGCGGCCAAGGTCATGCTCGCTGCCGAC
GTCATCATTCTGGAATACGAAACTCGTTCCGTCATGCTTACCGGTTGCTT
TCACAAAGGCCACGTCAGTCGCATGGAAGCACTTCAGCCCGGAGCAGATT
AGTTGCCTTGAGGCTGCGCTGGAACACGAGCAATGCAAAACGTGAGCGAG
TACATTGCAAGGGGTTCATTTGGAATCTGCGCAAGGCGATAGATTAGAAT
GGTAAATCCAGCTCACCCACGCAGAATGGAAAACAATTATGCATATCGGC
AGCGGGAAAGGCATGATTGTGGATCAACGAGCTTCTATTGACGAGAGGGG
CAGGATGAACGGCAGAAGACTGGTTGAAGCGCTAAATTCTCTGCGACAGG
CTGTGCAAGCAGGAACGGCACAGACGACACTATTTTTCCGCATTGTTGGT
AATCTTTTCGGAATTGCTGGTTCCTTCTGTGGCGGCCATTTGAATTTTCT
TCGATTCTCGTTTCGCCGTGGAGGCAAACCTTTCAAGATCCTCTCGTTTG
ACCACGGACTCAAGAAACGTTTGATATGCCGGGATCCATTGGGATGTGTA
TTGTAGTCTACCGAAACGCCGCCCGTAGGCAATGATCTACCCGTATCCAT
TCCCGGGCGGTAGTTGGTCTACACCTCATGGACATTTCCATGAAAAACTT
TGCCACGGTCCAGGCTTCTTGCGCTGTACCTTGGGCTTGGCGGGGCGAAC
TGCCTCGAAGATGGCAGGACTGAGGGACGCGGGGCAAGAATTGACTATGC
AAGCGCTCGAACAAATAGCTTGACGGAAAAGGAGAGGGTGGTGCTTGACT
TCCACTACTACAACTACGCGTTTTGCAAAGAGCGACGGTTCGACGCTCGC
GCCACATCGACCTTCTTGTCGATCATGAAGGACATCTTGGACGAGGTGCT
CGTACAACGTTGCGAAAAAGTAGGTTCGAGTAGCAGCGACGAGCTCTCAT
GAGAAACAGAGGTGGTTTCTCAGAGAGCGATAGCGACACCGACTGCCAAC
AATAGAAGTGCTGTGGATAGGAACCACCGCACGAAGTACGCGTGGAAGCG
AAATAGTTCGGACACTTCCGAGCCGGCAGTATTAGAAGAAAGAATTGGGC
ACTTATCCGTTGCGCTGTCCGGTGCGCGAGAGACCCAACAGTAGGACCCA
CGACATGCACGTTCGATCCTTGAACAATCCTCATTCATGATAACGATGTT
TGACAATGGTGTAACAATCTGGGTACACCCGTGGTTGCTTTGTAACGTTC
TCGAAAACAGAGTGATTGCGGCACAAGAGGGGTGGTCCCGCTGTTGAATA
ACACGTCAACTCGAGAGCCCTGCCAAAGTTCAAACGTACCTGTAGGTCGT
AGATGTTGACCACCCTCCCACTTCCCTGTGTCCCTTCCACCATGGAATTT
GCGCTCGCGCAACGTGTTGGTTGCGTCACACAAGGATATGCGAACGAACG
ACTCGACCTCGTCGCTGAGGAAGTCCTTCAATCGGTTCGAGGAGCTTATC
CTTCGACACGCGGTCGACCGCCCGCCATGGACGACTGGAGTGCTCAGCCC
GAAAGACATCGGAGCCATCACGGACTACGTGGCCACCAGGCAAGAGTTCG
AAGTTGATCCCTACAACAATCGTTGCTTGTGTGCAGCTACCCCAAGCTCT
GCCCAGGGTTTGCCAACGCCTTGAGGGCCTTAGCCTCCTTGATAAAGACA
GTTCGAATGGACTCGTGTACTTGCCAAGATGCCAGAAAATGCCAGGGAGA
GGAAAGAGAGCGCGAGCAAGCGAGAGAGAGAACATGACATGCATTGGAAA
TCAAAACAGGCGAGAAACGTGTGGCGTGGCGAAGCGTAGAGCAGGGTTGA
CGGCGTCGGCGACACAACCAAGACAGTCCACGAAAAACAGCGAACCGTTT
TGATACGAGTTCGTGGTGTGCGGGTGGAGGTTCGACTAGCGACATAGTCG
GACCAAACATGTGCGAATGATTTACCGCAAACAATAAAGTAGAGTCAGGC
TGCTAGAGTAGTAGATAATGTGCACATAATAATTTATCAAGGAGCTGCCG
ATCATCCAGTAGCATGAAGGAATCACGCGAGGGATGCCAGGACAGTCCTA
GTAGGCCTAACTGGGGGACAAAACGAAATGCACCGAAATGCCAGGCAATC
CCCAACATCAGCGAAGTACAGGTTTGGGGCATTCAGACGCATGCGGAGAT
ATCGTTGGTTCCATCTAACAGAGTGAGCCTCAGAGTTCTGGAGCGTGGAC
AGGCGAAGGAAGTTGGCATCCGGACTGGAAAAATTGCGTACAGTATGCCG
AAGGTCCTCCGCGAGACTGACAGCTGAATCCTAGATGACCCATCAGGGGT
AACTTGCGACAAAACATCAACTTATATATTGCAGTGCAGGCGAAGACTTT
GTCGGGACATCTTCTTTCGATCGTTTCTCGGTGCTGACGAACGCTTTCAC
CTGGACGTTATTTGACTGACCTGGATGTCTTGGTCTCGCACATCCATGTC
CCGTGGCATGTAGAATCGAGCGACATCGTTCACGGCGCCGCCAGCGTTGG
ATATTTGAGCTTCCTATTAAATAAAACTTGGTTCCGCGCCTTACGAACAC
CACCTTGGGATCTTTCCTGCTACGATGTGGTCGTTAAGCTTGCATCCAAC
AACTATGAGCATGTGGCCAACAACAACGTAGTACCCCCCCACGTCCTGTG
CATCGTCTGCTCTGCCTTGCCTTCTACAACAACAGCTACTACCGCCACTT
CACCCTCTACAAGCATATCTTCACGACGAAGATCAACGTGGTAATCGAAC
AAAGGCACCCGCACGGCGTCGAGGAGCCACCGCTGGCACCCCCCCTTGGC
GGTGCACTGATGATGATCAATGTGAGCCAAAGTCGAAGCTCGACGTGGCA
TGGCCCAGAATGGTGCGACTTTCAAACTTTCGGACCAGCGGGGAGGAACG
AAGCAACTCTCTTGGTCTGAACACGAACAACACATGACACAAGCTTCTTC
TCCCTCCAAACCCGGAGACAAGGGGTCTAGTTGTACGTTGAGAGTTCCCA
TACGTGCGATCGTCAGGTCAAGGTAGAGTTAAACTCTACAGCAACACTTT
GCGATCAATGTGTTCCGTCGTGTGTGAGTAAGCACCCACATAGGAGCCGA
TCCCGTACCAGAATATTCACCCGTCCTCACGACTTAGAAAGGACCTCTTG
GCATTTTTTTTGGAGGATTAGTTGTCGCACGCTCTCTGTTTGCGGTTCCA
TGGTCCGTGCAAAGGGATGGGGTGAACGTGTCTGGTTTAGCGCGACTGGT
TGCTGGTCTGGGCTCGGTATTCCCACAACGTGGACGCATTGTACACAACG
CTCAAGGCATGTGTAGAGCGTAGCATTGTCCATGCCTCGTTTCTGTTTCG
TTCTGCGCTACTTCGCGGAAGCATCGAAGGAGGAGGGAATGGTGCGCGGG
TCTGGATATTCTTCGTACGGGTGACCGATACCAATTTTCTTCACAATTTA
TGGTATTGTTGACGTAAGGATGGCGTTCGATTGTGTTGCGGCTTACGTAA
ATTTACGTCATATCCGCCTTTGTACATGAAACACTGGAGCAAAATAATCA
ATTCCCCGTTTGGCAGGTTCCTGCCGTGGCGGGTGAGGAAGGAGACCAAG
ATGCGATGGCCATCGGTACTGATGACGTTATTTCTCCCGAAGAGGAATAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig89:127676..132975+

>mRNA_E-siliculosus-1a_M_contig89.16867.1 ID=mRNA_E-siliculosus-1a_M_contig89.16867.1|Name=mRNA_E-siliculosus-1a_M_contig89.16867.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1572bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig89:127676..132975+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGTTGGAGGTATGTTGGAGGTATGCTCCTGCCGCACGTGGTGCTGCAGT
CATATTCCGCACAAGCAGGGAGGCACCCACGACGCGAAGGAGGGTCCTAT
GATGCTCCTGCCGCACGTGGTGCTGCAGTCATATTCCGCACAAGCAGGGA
GGCACCCACGACGCGAAGGAGGGTCCTATGGCCACGTCAGTCGCATGGAA
GCACTTCAGCCCGGAGCAGATTAGTTGCCTTGAGGCTGCGCTGGAACACG
AGCAATGCAAAACGCCACGTCAGTCGCATGGAAGCACTTCAGCCCGGAGC
AGATTAGTTGCCTTGAGGCTGCGCTGGAACACGAGCAATGCAAAACGCTT
CTTGCGCTGTACCTTGGGCTTGGCGGGGCGAACTGCCTCGAAGATGGCAG
GACTGAGGGACGCGGGGCAAGAATTGACTATGCAAGCGCTCGAACAAATA
GCTTGACGGAAAAGGAGAGGGTGGTGCTTGACTTCCACTACTACAACTAC
GCGTTTTGCAAAGAGCGACGGTTCGACGCTCGCGCCACATCGACCTTCTT
GTCGATCATGAAGGACATCTTGGACGAGGCTTCTTGCGCTGTACCTTGGG
CTTGGCGGGGCGAACTGCCTCGAAGATGGCAGGACTGAGGGACGCGGGGC
AAGAATTGACTATGCAAGCGCTCGAACAAATAGCTTGACGGAAAAGGAGA
GGGTGGTGCTTGACTTCCACTACTACAACTACGCGTTTTGCAAAGAGCGA
CGGTTCGACGCTCGCGCCACATCGACCTTCTTGTCGATCATGAAGGACAT
CTTGGACGAGGATATGCGAACGAACGACTCGACCTCGTCGCTGAGGAAGT
CCTTCAATCGGTTCGAGGAGCTTATCCTTCGACACGCGGTCGACCGCCCG
CCATGGACGACTGGAGTGCTCAGCCCGAAAGACATCGGAGCCATCACGGA
CTACGTGGCCACCAGGCAAGAGATATGCGAACGAACGACTCGACCTCGTC
GCTGAGGAAGTCCTTCAATCGGTTCGAGGAGCTTATCCTTCGACACGCGG
TCGACCGCCCGCCATGGACGACTGGAGTGCTCAGCCCGAAAGACATCGGA
GCCATCACGGACTACGTGGCCACCAGGCAAGACTACTACCGCCACTTCAC
CCTCTACAAGCATATCTTCACGACGAAGATCAACGTGGTAATCGAACAAA
GGCACCCGCACGGCGTCGAGGAGCCACCGCTGGCACCCCCCCTTGGCGGT
GCACTGATGATGATCAATCTACTACCGCCACTTCACCCTCTACAAGCATA
TCTTCACGACGAAGATCAACGTGGTAATCGAACAAAGGCACCCGCACGGC
GTCGAGGAGCCACCGCTGGCACCCCCCCTTGGCGGTGCACTGATGATGAT
CAATGTTCCTGCCGTGGCGGGTGAGGAAGGAGACCAAGATGCGATGGCCA
TCGGTACTGATGACGTTATTTCTCCCGAAGAGGAATAAGTTCCTGCCGTG
GCGGGTGAGGAAGGAGACCAAGATGCGATGGCCATCGGTACTGATGACGT
TATTTCTCCCGAAGAGGAATAA
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