mRNA_E-siliculosus-1a_M_contig88.16846.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig88.16846.1
Unique NamemRNA_E-siliculosus-1a_M_contig88.16846.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig88.16846.1 vs. uniprot
Match: A0A6H5KH83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH83_9PHAE)

HSP 1 Score: 701 bits (1809), Expect = 3.200e-252
Identity = 381/404 (94.31%), Postives = 386/404 (95.54%), Query Frame = 1
Query:  193 MNTQEQVSGXXXXXXXXXXXADQVQDGEPRAALTAVLTSKALEVARNGFAGATAGAVSRVLTAPLDVAKIRFQLDHGATRRYDSTLWAAMRSIYGEEGLVTLWRGNLPAMFLWSAYTAVQFSAYEHLRAMDFLRSRERDNGVSGGGVRHRGSSCPSSSPPHERRGAGRVGEVGGWRTGGREGENRYQALRRQQDGRGRGLPPALANFVYGAMAAFTATLATYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGFRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPLAFSGSGSGASPAAALSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMMERNSAYGVLPKYAGPVHALKTVLREEGAAALFRGTVPAMWKTGVSTAVTYAVYEWVRAGTAVTLD 1404
            MNTQEQVS XXXXXXXXXX ADQVQDGEPRAALTAVLTSKALEVAR+GFAGATAGAVSRVLTAPLDVAKIRFQLDHGATRRYDSTLWAAMRSIYGEEGLVTLWRGNLPAMFLW+AYTAVQFSAYE LRA DFL SR+  N VSGGGVR+RGSSCPSSS PHERRGAGRVGEVGGWRTGGREGEN+YQALRRQQDGRGRGLPPALANFVYGAMAAFTATL TYPLDITRTALAFQGVPKRYNSMSEFLRRTARESG RGLFRGATPTLAMITPQMGVSFAVWEAL GGAP AFSGSGSGASPAA LSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMMERNS YGVLPKYAGPVHA KTVLREEGAAALFRGTVPAMWKTGVSTAVTYAVYEWVR GTAV LD
Sbjct:    1 MNTQEQVSSXXXXXXXXXX-ADQVQDGEPRAALTAVLTSKALEVARSGFAGATAGAVSRVLTAPLDVAKIRFQLDHGATRRYDSTLWAAMRSIYGEEGLVTLWRGNLPAMFLWAAYTAVQFSAYEQLRATDFLLSRQH-NSVSGGGVRYRGSSCPSSSSPHERRGAGRVGEVGGWRTGGREGENQYQALRRQQDGRGRGLPPALANFVYGAMAAFTATLVTYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGVRGLFRGATPTLAMITPQMGVSFAVWEALTGGAPRAFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMMERNSTYGVLPKYAGPVHAFKTVLREEGAAALFRGTVPAMWKTGVSTAVTYAVYEWVRVGTAVALD 402          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16846.1 vs. uniprot
Match: D8LK96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK96_ECTSI)

HSP 1 Score: 552 bits (1423), Expect = 2.260e-194
Identity = 294/315 (93.33%), Postives = 299/315 (94.92%), Query Frame = 1
Query:  265 QDGEPRAALTAVLTSKALEVARNGFAGATAGAVSRVLTAPLDVAKIRFQLDHGATRRYDSTLWAAMRSIYGEEGLVTLWRGNLPAMFLWSAYTAVQFSAYEHLRAMDFLRSRERDNGVSGGGVRHRGSSCPSSSPPHERRGAGRVGEVGG-WRTGGREGENRYQALRRQQDGRGRGLPPALANFVYGAMAAFTATLATYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGFRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPL-AFSGSGSGASPAAALSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAV 1203
            QDGEP AALTAVLTSKALEVARNGFAGATAGAVSRVLTAPLDVAKIRFQLDHGATRRYDSTLWAAMRSIYGEEGLVTLWRGNLPAMFLWSAYTAVQFSAYE LRA DFLRSR+ D+ VSGGGVRHRGS CPSSSPPHERRGAGRVG+VGG WRTGGREGE+  QA RRQQDGRGRGLPPALANF YGAMAAFTAT+ TYPLDITRTALAFQGVPKRYNSMSEFLRRTARESG RGLFRGATPTLAMITPQMGVSFAVWEALKGGAP  AFSGSGSGASPAA LSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAV
Sbjct:    6 QDGEPCAALTAVLTSKALEVARNGFAGATAGAVSRVLTAPLDVAKIRFQLDHGATRRYDSTLWAAMRSIYGEEGLVTLWRGNLPAMFLWSAYTAVQFSAYEQLRATDFLRSRQHDSSVSGGGVRHRGSICPSSSPPHERRGAGRVGKVGGGWRTGGREGESPCQARRRQQDGRGRGLPPALANFAYGAMAAFTATVVTYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPPAFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAV 320          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16846.1 vs. uniprot
Match: A0A836C8L1_9STRA (Mitochondrial substrate/solute carrier n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8L1_9STRA)

HSP 1 Score: 203 bits (516), Expect = 4.520e-58
Identity = 143/352 (40.62%), Postives = 182/352 (51.70%), Query Frame = 1
Query:  331 NGFAGATAGAVSRVLTAPLDVAKIRFQLDHG-ATRRYDSTLWAAMRSIYGEEGLVTLWRGNLPAMFLWSAYTAVQFSAYEHLRAMDFLRSRERDNGVSGGGVRHRGSSCPSSSPPHERRGAGRVGEVGGWRTGGREGENRYQALRRQQDGRGRGLPPALANFVYGAMAAFTATLATYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGFRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPLAFSGSGSGASPAAALSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMMERNSAYGVLPKYAGPVHALKTVLREEGAA-ALFRGTVPAMWKTGVSTAVTYAVYEWVR 1380
            N  AG  AGAVSR+ TAPLDVAKIR QLD G A+ RY S L    RS+Y EEGL+ LWRGN  AM LW AYTAVQF  Y  +R  D L +                S   + + P                              RQ D            F+ GA AA  AT  TYPLD+ RTA A QGVP+R+ ++  F   T   +G RG + G +  L  + PQMG++F  +EA+K   P A +     A+P  A  W   AG  AG++ K VV+PLDT+KKRVQ  V++       V    AG + +    + +EGAA AL+RG VPA+WK  +S AVT+  YEWV+
Sbjct:   18 NAVAGGVAGAVSRISTAPLDVAKIRCQLDGGKASPRYGSLL-KTFRSVYAEEGLIGLWRGNPAAMALWIAYTAVQFGLYPLVR--DALSA----------------SRASAYARP------------------------------RQTD-----------KFLAGAAAACVATTCTYPLDVMRTAFAGQGVPRRHPTLRAFAANTLHVAGVRGFYAGLSAALVQVAPQMGIAFMAYEAVKDHPPQALA-----AAPGLATWWPGVAGFSAGLLSKTVVYPLDTLKKRVQARVVLSCAGDQAVAQ--AGNLRSAAATVWQEGAAVALYRGLVPALWKASLSAAVTFGTYEWVK 302          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16846.1 vs. uniprot
Match: A0A836C9B4_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9B4_9STRA)

HSP 1 Score: 202 bits (514), Expect = 1.860e-57
Identity = 141/353 (39.94%), Postives = 184/353 (52.12%), Query Frame = 1
Query:  337 FAGATAGAVSRVLTAPLDVAKIRFQLDHG-ATRRYDSTLWAAMRSIYGEEGLVTLWRGNLPAMFLWSAYTAVQFSAYEHLRAMDFLRSRERDNGVSGGGVRHRGSSCPSSSPPHERRGAGRVGEVGGWRTGGREGENRYQALRRQQDGRGRGLPPALANFVYGAMAAFTATLATYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGFRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPLAFSGSGSGASPAAALSWQLGAGMVAGMVGKLVVFPLDTVKKRVQT-AVMMERNSAY--GVLPKYAGPVHALKTVLREEGA-AALFRGTVPAMWKTGVSTAVTYAVYEWVR 1380
            FAG  +GAVSR+ TAPLDVAKIR QLD G  + RYD  L    RS+Y EEGLV+LWRG+  AM LW +Y+ VQF  Y   R +  +R                                        WR    + E    +L  QQ  R          F+ GA A   AT ATYP D+ RTA A QGVP+++ ++  F+  T R  G RGL+ G TP +  + PQ+G++F  +EA++   P A       A PA    W   AG  AG+V K+ V+P+DT+KKR+Q  AV+  R  A   G     +G V A    +  EGA  AL+RG VPA+WK+ VSTAVT+  YEWV+
Sbjct:   33 FAGCVSGAVSRLATAPLDVAKIRCQLDGGRGSARYDGLLMT-FRSVYAEEGLVSLWRGSPAAMMLWVSYSGVQFGVYPVFRRL-LMR----------------------------------------WRRWAHQEE---ASLFLQQRDR----------FLAGAAAGCVATTATYPFDVMRTAFAGQGVPRQHETLHAFVAGTLRTKGARGLYAGLTPAIMQMAPQIGIAFVCYEAMRDNVPAALR-----ALPAVGAWWPAAAGFTAGLVSKIAVYPVDTLKKRMQAQAVLAGRGVAESGGAGGAXSGGVRAAALSVWREGARVALYRGMVPALWKSSVSTAVTFGTYEWVK 325          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16846.1 vs. uniprot
Match: M4B5N0_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B5N0_HYAAE)

HSP 1 Score: 175 bits (443), Expect = 4.950e-47
Identity = 131/378 (34.66%), Postives = 182/378 (48.15%), Query Frame = 1
Query:  271 GEPRAALTAVLTSKALEVARNGFAGATAGAVSRVLTAPLDVAKIRFQL-------DHGATRRYDSTLWAAMRSIYGEEGLVTLWRGNLPAMFLWSAYTAVQFSAYEHLRAMDFLRSRERDNGVSGGGVRHRGSSCPSSSPPHERRGAGRVGEVGGWRTGGREGENRYQALRRQQDGRGRGLPPALANFVYGAMAAFTATLATYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGFRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPLAFSGSGSGA----SPAAALSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMMERNSAYGVLPKYAGPVHALKTVLREEGAAALFRGTVPAMWKTGVSTAVTYAVYE 1371
            G PR   +   T++A        +GA +G V+R++ AP D+ KIRFQ+       +     +Y+  L AA RSIY EEGL T WRGNL A  LW  Y+A+QF+ Y  L      R  E+D                                                     QDG     PP   + + GA+A  TA +ATYPLD+ RTA A QG+PKR+ +M           G RG + G   T   I P MG+SF+++  L   A    S   S A    +P +     +G+G VAG++ KLVV+P+DTVKKR+Q    + R+ AYGV+P Y+        VL+ EG   L++GTVP++ K+ VS + T+A YE
Sbjct:    7 GTPRDKRSTTTTTEA------AVSGAVSGGVTRLVAAPFDLLKIRFQVQPTPRINNKQVKLQYEGLLQAA-RSIYAEEGLRTFWRGNLAASGLWVGYSALQFATYRIL-----TRCWEQD-----------------------------------------------------QDGTAAATPPFRVSALNGAVAGVTAAVATYPLDLFRTAFASQGMPKRFPTMRSLALHIWTSQGVRGFYSGLGATTFQIAPYMGLSFSIYSTLNDVASKHRSKQESSAINTWTPLSRALSYVGSGAVAGLLSKLVVYPMDTVKKRMQMR-HVPRSEAYGVIPMYSSSWRCFVDVLQREGVRGLYKGTVPSLLKSVVSASATFATYE 318          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16846.1 vs. uniprot
Match: A0A329T089_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T089_9STRA)

HSP 1 Score: 174 bits (442), Expect = 6.920e-47
Identity = 126/355 (35.49%), Postives = 175/355 (49.30%), Query Frame = 1
Query:  337 FAGATAGAVSRVLTAPLDVAKIRFQLD-----HGATRRYDSTLWAAMRSIYGEEGLVTLWRGNLPAMFLWSAYTAVQFSAYEHLRAMDFLRSRERDNGVSGGGVRHRGSSCPSSSPPHERRGAGRVGEVGGWRTGGREGENRYQALRRQQDGRGRGLPPALANFVYGAMAAFTATLATYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGFRGLFRGATPTLAMITPQMGVSFAVWEAL-----KGGAPLAFSGSGSGASPAAALSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMMERNSAYGVLPKYAGPVHALKTVLREEGAAALFRGTVPAMWKTGVSTAVTYAVYE 1371
            FAGA +GAV+R++ APLD+ KIRFQ+      +G      + L  A+RSIY EEGL + WRGNL A  LW  Y+A+QF++Y  L    + RS   D                                                           G P  +     GA+A  TAT+ TYPLD+ RTA A QG+PKR+ +M   +  T    G RG + G   T+  I P +G+SF ++  L     K  +    S +G+      ALS+ +G G VAG+V KL V+PLDTVKKR+Q    + R + YGV+P Y+        VLR EG   L++GTVP++ K+ V+ + T+A YE
Sbjct:   18 FAGAVSGAVTRLVAAPLDLLKIRFQVQPAPIANGHVEAKYAGLLQAVRSIYAEEGLRSFWRGNLAASGLWVGYSALQFASYRELNRR-WERSENSDT---------------------------------------------------------LGAPAVVITAASGAVAGVTATVVTYPLDLFRTAFASQGMPKRFPTMHSLVLHTWATQGIRGFYSGLGATVFQIAPYIGLSFGIYSTLSEMSVKNRSKQEESETGAWLPLMTALSY-VGNGAVAGLVSKLAVYPLDTVKKRMQMR-HVPRCATYGVIPMYSSSWSCFLDVLRREGVRGLYKGTVPSLLKSVVAASTTFATYE 312          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16846.1 vs. uniprot
Match: A0A5D6Y0B7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0B7_9STRA)

HSP 1 Score: 172 bits (436), Expect = 4.780e-46
Identity = 126/353 (35.69%), Postives = 171/353 (48.44%), Query Frame = 1
Query:  340 AGATAGAVSRVLTAPLDVAKIRFQLDHGATRRYDS--------TLWAAMRSIYGEEGLVTLWRGNLPAMFLWSAYTAVQFSAYEHLRAMDFLRSRERDNGVSGGGVRHRGSSCPSSSPPHERRGAGRVGEVGGWRTGGREGENRYQALRRQQDGRGRGLPPALANFVYGAMAAFTATLATYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGFRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPLAFS-GSGSGASPAAALSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMMERNSAYGVLPKYAGPVHALKTVLREEGAAALFRGTVPAMWKTGVSTAVTYAVYE 1371
            AGA AG V+R++ APLD+ KIRFQ+      R           TL  ++RSI+ EEGL + WRGNL A  LW +Y+A+QF  Y  L  +      ER                                                                A  + + GA+A   AT ATYPLD+ RT LA QGVPK++ +M      T    G RG + G   TL  I P MG+SF ++ +L   A         SGA  A ALS+ +GAG VAG++ KL V+PLDTVKKR+Q    + R + YGV+P YA  +  L+ +LR EG   L++GT P++ K+ V+ + T+A YE
Sbjct:   23 AGAVAGGVTRMIAAPLDLIKIRFQVQQAPISRATGHQHAAKYVTLLQSLRSIHSEEGLRSFWRGNLAATGLWVSYSAIQFGCYRSLGGLWSEHFVERHG--------------------------------------------------------------AAVSTLNGALAGVVATAATYPLDLFRTVLASQGVPKQFPTMRSLAAHTWAARGVRGFYSGLGATLFQIAPYMGLSFGLYASLNAAAAARVDLAHASGA--ALALSY-VGAGAVAGLLSKLAVYPLDTVKKRMQMR-QVPRCATYGVIPHYASSLACLRGILRREGLRGLYKGTAPSLLKSVVAHSSTFATYE 309          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16846.1 vs. uniprot
Match: A0A067CVE4_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CVE4_SAPPC)

HSP 1 Score: 172 bits (436), Expect = 5.160e-46
Identity = 128/355 (36.06%), Postives = 177/355 (49.86%), Query Frame = 1
Query:  316 LEVARNGFAGATAGAVSRVLTAPLDVAKIRFQLDHGATRRYD--STLWAAMRSIYGEEGLVTLWRGNLPAMFLWSAYTAVQFSAYEHLRAMDFLRSRERDNGVSGGGVRHRGSSCPSSSPPHERRGAGRVGEVGGWRTGGREGENRYQALRRQQDGRGRGLPPALANFVYGAMAAFTATLATYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGFRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPLAFSGSGSGASPAAALSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMMERNSAYGV-LPKYAGPVHALKTVLREEGAAALFRGTVPAMWKTGVSTAVTYAVYE 1371
            L+V     AGA AG  +RVL APLD+ KIRFQ+    +  +D  + L  A+  IYGEEG+ T WRGN+ A  LW +Y A+QF+ Y+ L+           N V    VRH           H       +  V  W +G                               GA+A   AT+ATYPLD+ RT LA QGVPK + +M  F        G RG F+G +PT+  I P MG+SF ++  L            +  S    +   +G G +AG V KL+V+PLDTVKKR+Q   +  R +AYG  +P+YA        ++R EG A L++GTVP++ K+GV+ + T+ VYE
Sbjct:   49 LDVWEGAVAGAVAGGATRVLAAPLDLLKIRFQVHAAPSTPHDLGTRLLRAVAHIYGEEGVRTFWRGNVAATGLWVSYAAIQFACYQALQ-----------NSV----VRH----------DHT------LSWV--WYSGS------------------------------GAIAGVVATVATYPLDLCRTVLASQGVPKVFPNMRSFASHMYANQGPRGFFQGLSPTVLQIAPYMGLSFGIYSTL------------ADLSTTHPVLHAIGNGAIAGFVSKLIVYPLDTVKKRMQMQGI-PRPAAYGASIPRYASSWRCGLDIVRREGIAGLYKGTVPSLIKSGVTHSCTFTVYE 327          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16846.1 vs. uniprot
Match: A0A2D4C4T9_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4T9_PYTIN)

HSP 1 Score: 170 bits (430), Expect = 2.300e-45
Identity = 124/358 (34.64%), Postives = 173/358 (48.32%), Query Frame = 1
Query:  340 AGATAGAVSRVLTAPLDVAKIRFQLD-------HGATRRYDSTLWAAMRSIYGEEGLVTLWRGNLPAMFLWSAYTAVQFSAYEHLRAM--DFLRSRERDNGVSGGGVRHRGSSCPSSSPPHERRGAGRVGEVGGWRTGGREGENRYQALRRQQDGRGRGLPPALANFVYGAMAAFTATLATYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGFRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPLAFSGSGSGASPA--AALSWQL---GAGMVAGMVGKLVVFPLDTVKKRVQTAVMMERNSAYGVLPKYAGPVHALKTVLREEGAAALFRGTVPAMWKTGVSTAVTYAVYE 1371
            AGA AG VSR++ AP D+ KIRFQL        H  + +Y S L  ++RSI+ EEGL + WRGNL A  LW  Y+A+QF +Y  L A   D +R++ +                                                                 + + V GA A   AT+ TYPLD+ RT  A QGVPKR+ +++   R T    G RGL+ G  P L  I P MG+SF ++ +L   A +A   +   A P    +L W L   G G  AG++ K VV+PLDTVKKR+Q   M  R   YGV+P Y       + +LR EG   L++GT+P++ K+ V+ + T+A +E
Sbjct:   16 AGAVAGGVSRLVAAPFDLVKIRFQLQQAPISSSHQGSAKYVSLL-QSVRSIHSEEGLRSFWRGNLAATKLWVGYSAIQFGSYRALNAAWSDDMRTQHK----------------------------------------------------------------TVVSSVNGACAGVIATIVTYPLDLFRTIFASQGVPKRFPTLASLARHTLSTRGVRGLYSGIGPALFQIAPYMGLSFGIYSSLN--AAIAEHNASIHAEPPRPGSLVWLLSYVGTGAAAGLLSKTVVYPLDTVKKRMQMREMT-RCETYGVIPHYKTSWACFRDILRREGVRGLYKGTLPSLLKSVVTHSSTFATFE 305          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16846.1 vs. uniprot
Match: A0A3M6VWB3_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VWB3_9STRA)

HSP 1 Score: 170 bits (431), Expect = 6.570e-45
Identity = 127/360 (35.28%), Postives = 173/360 (48.06%), Query Frame = 1
Query:  337 FAGATAGAVSRVLTAPLDVAKIRFQLDHGATRRYDS-----TLWAAMRSIYGEEGLVTLWRGNLPAMFLWSAYTAVQFSAYEHLRAMDFLRSRERDNGVSGGGVRHRGSSCPSSSPPHERRGAGRVGEVGGWRTGGREGENRYQALRRQQDGRGRGLPPALANFVYGAMAAFTATLATYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGFRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPLAFSGSGSGAS----PAAALSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMMERNSAYGVLPKYAGPVHALKTVLREEGAAALFRGTVPAMWKTGVSTAVTYAVYEWVRAGT 1389
            FAGA +G V+R++ APLD+ KIRFQ+  G+     S     TL+ A+ SIY EEGL + WRGNL A  LW  Y+A+QF+ Y  L                        + C                    W+  G              D    G+   L +   GAMA  TAT+ TYPLD+ RTA A QG+PKR+ +M           GFRG + G   T   I P MG+SF ++  L   A    S   +  +    P +     +G+G VAG V KLVV+PLDTVKKR+Q    + R   YGV+P Y+        VL+ EG   L++GTVP++ K+ V+ + T+A YE+    T
Sbjct:   53 FAGAISGGVTRLIAAPLDLLKIRFQVQPGSLSSTSSGLKYSTLYQAIHSIYAEEGLRSFWRGNLAASGLWVGYSALQFATYRVLN-----------------------TRC--------------------WKKDG--------------DDVKVGISTVLISAFNGAMAGVTATVVTYPLDLFRTAFASQGMPKRFPTMRSLALHMWTTQGFRGFYSGLGATTFQIAPYMGLSFGIYSTLNEVAAQHRSKQENVDADVWMPLSTGLSYVGSGAVAGFVSKLVVYPLDTVKKRMQMR-HVPRCETYGVIPMYSSSWTCFFDVLQREGIRGLYKGTVPSLLKSVVTASTTFATYEFTLEAT 354          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig88.16846.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KH83_9PHAE3.200e-25294.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK96_ECTSI2.260e-19493.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C8L1_9STRA4.520e-5840.63Mitochondrial substrate/solute carrier n=1 Tax=Tri... [more]
A0A836C9B4_9STRA1.860e-5739.94Mitochondrial carrier domain-containing protein n=... [more]
M4B5N0_HYAAE4.950e-4734.66Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A329T089_9STRA6.920e-4735.49Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A5D6Y0B7_9STRA4.780e-4635.69Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A067CVE4_SAPPC5.160e-4636.06Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A2D4C4T9_PYTIN2.300e-4534.64Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A3M6VWB3_9STRA6.570e-4535.28Uncharacterized protein n=2 Tax=Peronospora effusa... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig88contigE-siliculosus-1a_M_contig88:603137..609740 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1215
Model size1407
Exons6
Ec32 orthologEc-16_002560.1
Ec32 ortholog descriptionMitochondrial carrier domain
Hectar predicted targeting categoryother localisation
BRITEko00000,ko02000
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.U
EggNOG OGsKOG0752@1,KOG0752@2759
EggNOG free text desc.mitochondrial transport
KEGG TC2.A.29.16,2.A.29.28
KEGG koko:K15108
Seed eggNOG ortholog2880.D8LK96
Seed ortholog evalue1.5e-156
Seed ortholog score559.3
Taxonomic scopeEukaryota
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936352.6918502-CDS-E-siliculosus-1a_M_contig88:603136..6033431622936352.6918502-CDS-E-siliculosus-1a_M_contig88:603136..603343Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig88 603137..603343 -
1696251039.1499264-CDS-E-siliculosus-1a_M_contig88:603136..6033431696251039.1499264-CDS-E-siliculosus-1a_M_contig88:603136..603343Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig88 603137..603343 -
1622936352.712641-CDS-E-siliculosus-1a_M_contig88:603684..6039901622936352.712641-CDS-E-siliculosus-1a_M_contig88:603684..603990Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig88 603685..603990 -
1696251039.1620746-CDS-E-siliculosus-1a_M_contig88:603684..6039901696251039.1620746-CDS-E-siliculosus-1a_M_contig88:603684..603990Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig88 603685..603990 -
1622936352.729911-CDS-E-siliculosus-1a_M_contig88:605674..6060651622936352.729911-CDS-E-siliculosus-1a_M_contig88:605674..606065Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig88 605675..606065 -
1696251039.1713636-CDS-E-siliculosus-1a_M_contig88:605674..6060651696251039.1713636-CDS-E-siliculosus-1a_M_contig88:605674..606065Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig88 605675..606065 -
1622936352.7496648-CDS-E-siliculosus-1a_M_contig88:606782..6068811622936352.7496648-CDS-E-siliculosus-1a_M_contig88:606782..606881Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig88 606783..606881 -
1696251039.1804664-CDS-E-siliculosus-1a_M_contig88:606782..6068811696251039.1804664-CDS-E-siliculosus-1a_M_contig88:606782..606881Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig88 606783..606881 -
1622936352.7743456-CDS-E-siliculosus-1a_M_contig88:607125..6071711622936352.7743456-CDS-E-siliculosus-1a_M_contig88:607125..607171Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig88 607126..607171 -
1696251039.1897728-CDS-E-siliculosus-1a_M_contig88:607125..6071711696251039.1897728-CDS-E-siliculosus-1a_M_contig88:607125..607171Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig88 607126..607171 -
1622936352.8023949-CDS-E-siliculosus-1a_M_contig88:609382..6095481622936352.8023949-CDS-E-siliculosus-1a_M_contig88:609382..609548Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig88 609383..609548 -
1696251039.203142-CDS-E-siliculosus-1a_M_contig88:609382..6095481696251039.203142-CDS-E-siliculosus-1a_M_contig88:609382..609548Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig88 609383..609548 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936352.824423-UTR-E-siliculosus-1a_M_contig88:609548..6097401622936352.824423-UTR-E-siliculosus-1a_M_contig88:609548..609740Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig88 609549..609740 -
1696251039.2239635-UTR-E-siliculosus-1a_M_contig88:609548..6097401696251039.2239635-UTR-E-siliculosus-1a_M_contig88:609548..609740Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig88 609549..609740 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig88.16846.1prot_E-siliculosus-1a_M_contig88.16846.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig88 603137..609548 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig88.16846.1

>prot_E-siliculosus-1a_M_contig88.16846.1 ID=prot_E-siliculosus-1a_M_contig88.16846.1|Name=mRNA_E-siliculosus-1a_M_contig88.16846.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=405bp
MNTQEQVSGGGGAAVAAAAAADQVQDGEPRAALTAVLTSKALEVARNGFA
GATAGAVSRVLTAPLDVAKIRFQLDHGATRRYDSTLWAAMRSIYGEEGLV
TLWRGNLPAMFLWSAYTAVQFSAYEHLRAMDFLRSRERDNGVSGGGVRHR
GSSCPSSSPPHERRGAGRVGEVGGWRTGGREGENRYQALRRQQDGRGRGL
PPALANFVYGAMAAFTATLATYPLDITRTALAFQGVPKRYNSMSEFLRRT
ARESGFRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPLAFSGSGSGAS
PAAALSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMMERNSAYGVLPK
YAGPVHALKTVLREEGAAALFRGTVPAMWKTGVSTAVTYAVYEWVRAGTA
VTLD*
back to top

mRNA from alignment at E-siliculosus-1a_M_contig88:603137..609740-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig88.16846.1 ID=mRNA_E-siliculosus-1a_M_contig88.16846.1|Name=mRNA_E-siliculosus-1a_M_contig88.16846.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=6604bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig88:603137..609740- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CGAAAGTATACACTCATCCAGCTGGGTAGCGTCTGTCACGCTCTGGATAG ACTCAAAGCTTCCTTGAGGTTGATTTGACACGGCACTGCTGGTGGCACTC TTTCGTGTAAGCAGCCAGAAGTCGCGGTACTCGCGGAGTCCGGCGTGTGG TAAAGAGCGGAAAAACCAACCACCAGAGAGCAGACCCGACACATGAACAC GCAGGAACAAGTGAGTGGCGGGGGCGGTGCTGCTGTTGCTGCTGCTGCTG CTGCTGACCAAGTGCAGGATGGAGAGCCCCGCGCTGCGCTGACGGCCGTG CTCACGTCGAAGGCGCTCGAGGTCGCACGCAATGGCTTCGCCGGGGCGAC GGCTGGCGGTGAGAACAAAACTGCTGTATGTCGTATGTCGTGATCACGTC ACGAACCGTCACGTCACTCGTGATTGCTGTGCTGCTGCTGCTGCTGCTGG TGGTAAGGTGGTTCTCGCCTAGCTTCAGTTGGGCCAACAAAGGCGGCCGG TTGAAGCAGGTGTTGCCTAGAAGGAAGCAGTAGCAGCTCTAGCTGTTGCT GTCATGGCGGCCATGAACAATTCAGCGCAGTACCAACCAGAGACCTGTCG AGATGTTTCAGCACATGTTGCTCATCAGCCGCAACAGGAAACTTGCAATT GCGCCGCAGTTTCCTCGAGGCTGCCGGCTCTTGGGCCTTTTCAGCCAGGC TCGCGAGAACCATCCACACGCGTGCAGAATGAGGAATGAGGCCCTTATCT ACCATTTTGTAGAAAAGTACCTGGTACATGCACAACACCGGACAAAGACT ACCGGAAAATACCCGGCTGTCTGGCGTGCTGAGCAAGAAACACTACCTGC TGCTGGTGCTGGTGCTGCAGCTGTATCAGCAGCGAACACTGCCTGTTGCT GTCTACATACAGCAGTACTTGATAGGAGAAAGTAGATTCCAGCAGGGGTA GCTTTCCAGGTAAGAGAAGAGCAGAGCAAGAGGTCAGGGAGCGCTTCATG ACGAGCTATCGTCGGCAGTTGATATACGTTGGGGCAATCGTGGAAAGTTG AGCGAACGATGGTTGATGTACGTATGGCACAGCTCCGCGTCCATGAATGA TCTGAGAGTATATGCATATTGTGCCTCTGAGGTTTTTATCGAAGAGCATC GCGACCTGCAAATCAAACGACACGCCCACCCTGGTGGCATCACTTCCTCA GGAAGGTGGGATGGTGCCGTGTTTTGAGTGGCCAAGCCCGGAGCACCAAG AGGGTGCCAATGCCGAAACAATACGATCTGATTTATTTGTTGTATGCAGA CATCACACTCGGAACGGTCTTGATGAGATATCGGAAAGAGGCGCAGAGAT GGCACCCACCCTATGTAGATCGACTCTCAAATCTCGATTGCTGCATAACC AAGGGGATGCACAAAGAGCCCGATACGACTACGGAAAGCCCTCGACGAGA TGCTTCCAAAACGAACATTCTTGGTGTTGGCACAATCCTGGTTGTTGAGC AATGGAGCTTTGAAAGGTCGCTCTAGGGGGGCTGCCATCTCTCCGCCTCT TACGGAATACCACGGTACGGTATACGGTACGGTACAGACAAGTTTGGTTG TGGAGCGATGGAGCTTTGAAAGGTCGCTCTAGGGGGGCTGCCATCTCTCC GCCTCTTGCGGAATACCACGGTACGGTATACGGTACGGTACAGACAAGTT TGGTTGTGGAGCGATGGAGCTTTGAAAGGCGCTCTAGGGGGGCTGCCATC TCTCCGCCTCTTACGGAATACCACGGTACGGTATACGGTACGGTACAGAC AAGTTTGGTTGTGGAGCGATGGAGCTTTGAAAGGCGCTCTAGGGGGGGTG CCATCTCTCCGCCTCTTGCGGAATACCACGGTACGGTATACGGTACGGTA CAGACAAGTTTGGTTGTGGAGCGATGGAGCTTTGAAAGGCGCTCTAGGGG GGGTGCCATCTCTCCGCCTCTTACGGAATACCACGGTACGGTATACGGTA CGGTACAGACAAGTTTGGTTGTGGAGCGATGGAGCTTTGAAAGGCGCTCT AGGGGGGCTGCCATCTCTCCGCCTCTTGCGGTATCTCCACCTCCACCCTC TTCGGCTCGCCCGCTCCGGCACCGGCACCTCTTGTCAAATAGTCTCCACG CGCCCTTCTGGCACAGACAATGACTGAAAAGGGTTTGGGTTAGGGTTGTT AGGGAAAAAGCCCCCTCCCTCTTGTTGTGTGCGGCAATCGAGCTTTGAAC TTCGGCCCAGGAGGGTCTGGCATAGACTACACCGTCCAACACCGATTGTA TACCCTGACTGCGGTTGCCGCTGATCGACGCTTTCGACTACACCACGTAC ATCCCCGATGGACAAGTACTCCCGTTGGAGATACGCGTATCAGCTGTGTA CGGTGCTACAAAAACAGTAGTGCGAACAAGCAGAAACTATTGCACTTGTG CTTACTTGCTCGCACAGCAACTCCTGACCGCTGTCTGACGCATGTACACC TTCTCTGGTGGTGTGTTGCCCCCACTGCCCCACGCCGTCCCTATTTGTCA ATCCGCTGGGCCCCTCCAGCGGTGTCCCGCGTGCTTACTGCTCCCCTGGA CGTGGCAAAAATAAGGTGAGAGATATAGCTGCAGTGGGCAAATTCGCAAT GTGGTAAGACCCCCCGTTCCCTCACCTCGCGTAGAACCGGGTGTTCGATA GAATAGGTGGAAGCGCCCGTACTCCGTTTCTCAACAAGGAACGCGGCCCG GAAGGGGAAAAACTACGTGCATACTACAAGCGACGGAATGAACGACCCTC CCCCCCTCCTCCCCTCTCCCCAATCGCGTCCCCCCCCCCCGTGCCTCCCG TGTTGTCAGGTTCCAGCTGGACCACGGCGCGACGAGACGCTACGACTCGA CCCTGTGGGCGGCGATGCGGAGCATCTACGGCGAGGAGGGGTTGGTCACG TTGTGGAGGTACGGCAGTCGAACCTCGGATAAGGACATACCATATCACAC CTGGTATTTTGCTAAGATTAGTGTCCTCAAGCCGGGGAGGTGTCCTTAAG GTTGATATATATGATACCCCTCCTTGTGTTGTACGTTCTCCGAGCCACCT ATGCCTATTGAAGAAAATTTTGTCCTTAGCCGGGGGGAGTTTCGTTAGTT TTGAAGTCCTTACGCGAGGCCGACTGTACATACGTACGTATGTAGGTGGA CTAAACGCTTGTGATCATCTCCCCTCCCTCGGCATTCCACCAACCAACCC CAACCGTCGGCCAAGGTCATGCATGCGCACGTACCCAATCCCGACTAAAC CATGCTAAATATTTCACCTCTTGACGCGCCGCCAAGAGGTAGACGGGGCA GGCTGCTGTGTCTCGGTGCGTACTTTTTTTTATGTCTGTCAGAAGAACGC ATCGTAGTATCATACCGAAGGAGAAGCTGGACGCCCGTGGCATATTCTCC ACTTTTTGGTATCACCTGCTTGGTCTTGGCTCCGTTGGCATCATTTACTT TTTTGTCGCCCCCGGTAGATATGACCTGCTTTCGACATAGGACAACAACC GCCAAATCTTGGACGGCCACGTGATATCCAAACACACACCACATCATGTC CGACTAATTTTACCCTTTGAAACCCGCCACAATAATAAAAAAAAAAACAC GGGACCCCGCCGGGCGGGGGGATAGAGGGAACCTACCGGCGATGTTTCTT TGGTCCGCCTACACGGCGGTCCAGTTTAGCGCGTACGAGCACCTTCGAGC CATGGACTTCCTCCGCTCCCGAGAGCGCGACAACGGCGTCAGCGGCGGCG GCGTCAGGCACCGCGGCAGTAGCTGTCCGTCTTCGTCGCCCCCTCACGAA CGGCGGGGGGCCGGCAGAGTCGGGGAGGTGGGGGGGTGGAGGACGGGAGG GCGGGAAGGCGAGAATCGGTACCAAGCGCTTCGGCGGCAACAGGACGGGC GAGGCCGAGGTCTGCCCCCAGCGCTGGCGAACTTCGTGTACGGTGCGATG GCCGCCTTCACCGCCACCCTCGCCACGTACCCGCTCGACATCACTCGCAC AGCGCTCGCGTTTCAAGTGAGAGAGGGCTGGATAATTCTATTTTGTTCTT TGCCTTGCCCCCCCCTCCCCCATGTGAGAGCCTGGTCCGGTGAGAACCCG GCGTGCTCCGTCCCGGCTTTGTAGGGATGCGACGTCAATGGTCTTAACGA CTACGGCATGCACGACTATGAGTACACCCCCCCCTCATCCCGCCCCGGTG TTTGCCATCGGGGTTGGGTTTTCGTCGCTTGGCAACGACGTTGTAAAACA AGCCGCCCCCCCCGGTGTTTGCCATCGGGGTTGGGTTTTCGTCGCTTGGC AGCGATGTTGTAAAACAAGCCGATCACTTCGTGAGCTCGGCAACCAGGTT ACCGCTTCTTTTTTTTTTGCCTCTTTTTTTTTTTGCGGTACCCATGAATG GTTGTCGAGTAGATTATGGTGTGCGGGGTCGAGTACCCTCACTCCGCGCA AAGGGGATAATCGCACGTTCGATTTAAGTTGGTCAAGCACCCTCGAGGCA GTTACACAGCGCTTACAACTGTCTCTGGAAGTGAAAGCACCAGAAAATAA AATAAGTCATACGCAGCTGTCATCTGTACCCAAGGAAGTAAGCACAAGAT GCCGAACACCCTTAGCAGGATGAACACCCTTAGCAGGATGCAGCTCACCC TTCATGCGACTCGCCGACTACCTCACGGTGCTTCGCGCTTGGTGATGTGA GAGCCTGGTCCGGTGAAAGTCCGGCGTGCTCCGTCCCGGCTTTGAGGGAT GCGAGGTCTATGGTCTAACGACTACGGCATGCACGACTATGAGTACACCC CCCCCCCGACCTTTTGTTTAAGCGTAGCCTGGGCCGGCGAAAGCCCGGCA TACGTATCGCTCCGTCCTGACAATGTTTGGATGCGAGGTTAATGGTCTAA CGACCACGGCGTGCGTTCGCATGTGCGTTTACCTCCCCCCCGCGACTCAC CCACCCTGCTGCCTCTTATTGACCTTCTCCAGAAAGTGCCGTTTTGTCTA CGAAGTCTTTGTTCTTAGAGCGCTGCTTTGATTTGACTTTTGCGCGCAAG CGCATGCTTCTTCCCCGGTGTGCGGTCCCCTTGTGTGTGGCAAAAAAAAA AATGTTCACAGACTCGAGGAGGCTGGTTGCCAAGAGTATGGCTTGTCGAG GTTCTTTGGCGTGGATGCTCAGAAGACCCGGTGACTCGGACCGAGCACGG GCACACTGAGCGGTTTCGAAAGTTGTTTATAACTCGTCAATAGGGCAAAA AGAAGGCATAATGTGACGCAAGATACCGCACCCCCCGGACCGAACTTCAA ACCTCGATTACCCCCCCAACGAAGATGCCAACAACCAAATGGGGAGTATT TTCGGAAAGCCGTCGACGAGACGATTCCAACGCCGCCGCCATCTTCGGTA TATTCCGTCGGCGTTTGTGCGAAAGAGTAGCCCAGCTTGGAAAATCGGGC CAGGGGGGAGTGATATCTCGTGCGACCTTTCGTATTTTGTCCATTCGATT TTCCCGGCGGTGACGTGTTTTTTTTTTTCGTTTGTTCTCCTGCAGGCTGG AAAACAACGGGGGGGGCTATTTTCCTATCACGCTTCTTCAGTGAAGCTTG GGTACACCCCAGCGTGTTGCGGCTCTCGCTCCACGACTGTACTGTAGAAC ATCATATATCAATACGCGTGTTTCCCACTCGCTGTCCTCCCCACGCGCAG GGAGTTCCGAAGCGATACAACAGCATGTCGGAGTTCTTGCGGCGCACGGC CCGCGAGTCCGGGTTCAGGGGACTGTTCAGGGGCGCGACACCGACGCTGG CCATGATCACCCCGCAGATGGGAGTGAGCTTCGCGGTGTGGGAGGCCCTC AAGGGCGGCGCGCCCCTCGCGTTTTCTGGGTCGGGTTCGGGTGCGTCGCC GGCGGCGGCGTTGTCGTGGCAGCTGGGCGCGGGCATGGTCGCCGGGATGG TCGGGAAGCTGGTGGTTTTCCCTCTGGACACGGTGAAGAAGAGAGTGCAG ACTGCGGTGAGAACAAGGATTCGCGGGGAGGAGAGGGGGGGGGGGGGCTC TTCCGCTGGGGAGACGCTGCGCAGTCCCACCGATTGTAGGGGGAAGGGAG GACGTACTCTTATGTTTTGCATGCCTTAGCGGCTAGACAATTGACCACGC TTCCTAATGGTAGGAGGGGGGACGGGGGGAATCAAAACCCGTAGCACTGT ACAATCGTTGAGTGTGGAAGCTAAACCTCCGAGCCTACCAATCAAGACAT TTCAGGATGTATTTGTTGCAGCTACATACATAGAGCAAGCAAAGCATCAT CTTCCGGCCATACCCTGCATGACACCGCGTGCCCCCCCCCCGTCCAGGTG ATGATGGAGCGCAACTCGGCCTACGGCGTTCTCCCCAAGTACGCGGGACC CGTTCACGCGTTGAAGACGGTGTTGAGGGAGGAGGGCGCCGCCGCGCTGT TCCGGGGAACGGTCCCCGCCATGTGGAAAACCGGGGTCTCGACCGCGGTG ACCTATGCGGTGTACGAGTGGGTCAGGGCGGGCACGGCTGTCACACTGGA CTAA
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig88:603137..609740-

>mRNA_E-siliculosus-1a_M_contig88.16846.1 ID=mRNA_E-siliculosus-1a_M_contig88.16846.1|Name=mRNA_E-siliculosus-1a_M_contig88.16846.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2430bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig88:603137..609740- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGAACACGCAGGAACAAGTGAGTGGCGGGGGCGGTGCTGCTGTTGCTGC
TGCTGCTGCTGCTGACCAAGTGCAGGATGGAGAGCCCCGCGCTGCGCTGA
CGGCCGTGCTCACGTCGAAGGCGCTCGAGGTCGCACGCAATGGCTTCGCC
GGGGCGACGGCTGGCGATGAACACGCAGGAACAAGTGAGTGGCGGGGGCG
GTGCTGCTGTTGCTGCTGCTGCTGCTGCTGACCAAGTGCAGGATGGAGAG
CCCCGCGCTGCGCTGACGGCCGTGCTCACGTCGAAGGCGCTCGAGGTCGC
ACGCAATGGCTTCGCCGGGGCGACGGCTGGCGCGGTGTCCCGCGTGCTTA
CTGCTCCCCTGGACGTGGCAAAAATAAGCGGTGTCCCGCGTGCTTACTGC
TCCCCTGGACGTGGCAAAAATAAGGTTCCAGCTGGACCACGGCGCGACGA
GACGCTACGACTCGACCCTGTGGGCGGCGATGCGGAGCATCTACGGCGAG
GAGGGGTTGGTCACGTTGTGGAGGTTCCAGCTGGACCACGGCGCGACGAG
ACGCTACGACTCGACCCTGTGGGCGGCGATGCGGAGCATCTACGGCGAGG
AGGGGTTGGTCACGTTGTGGAGAGGGAACCTACCGGCGATGTTTCTTTGG
TCCGCCTACACGGCGGTCCAGTTTAGCGCGTACGAGCACCTTCGAGCCAT
GGACTTCCTCCGCTCCCGAGAGCGCGACAACGGCGTCAGCGGCGGCGGCG
TCAGGCACCGCGGCAGTAGCTGTCCGTCTTCGTCGCCCCCTCACGAACGG
CGGGGGGCCGGCAGAGTCGGGGAGGTGGGGGGGTGGAGGACGGGAGGGCG
GGAAGGCGAGAATCGGTACCAAGCGCTTCGGCGGCAACAGGACGGGCGAG
GCCGAGGTCTGCCCCCAGCGCTGGCGAACTTCGTGTACGGTGCGATGGCC
GCCTTCACCGCCACCCTCGCCACGTACCCGCTCGACATCACTCGCACAGC
GCTCGCGTTTCAAAGGGAACCTACCGGCGATGTTTCTTTGGTCCGCCTAC
ACGGCGGTCCAGTTTAGCGCGTACGAGCACCTTCGAGCCATGGACTTCCT
CCGCTCCCGAGAGCGCGACAACGGCGTCAGCGGCGGCGGCGTCAGGCACC
GCGGCAGTAGCTGTCCGTCTTCGTCGCCCCCTCACGAACGGCGGGGGGCC
GGCAGAGTCGGGGAGGTGGGGGGGTGGAGGACGGGAGGGCGGGAAGGCGA
GAATCGGTACCAAGCGCTTCGGCGGCAACAGGACGGGCGAGGCCGAGGTC
TGCCCCCAGCGCTGGCGAACTTCGTGTACGGTGCGATGGCCGCCTTCACC
GCCACCCTCGCCACGTACCCGCTCGACATCACTCGCACAGCGCTCGCGTT
TCAAGGAGTTCCGAAGCGATACAACAGCATGTCGGAGTTCTTGCGGCGCA
CGGCCCGCGAGTCCGGGTTCAGGGGACTGTTCAGGGGCGCGACACCGACG
CTGGCCATGATCACCCCGCAGATGGGAGTGAGCTTCGCGGTGTGGGAGGC
CCTCAAGGGCGGCGCGCCCCTCGCGTTTTCTGGGTCGGGTTCGGGTGCGT
CGCCGGCGGCGGCGTTGTCGTGGCAGCTGGGCGCGGGCATGGTCGCCGGG
ATGGTCGGGAAGCTGGTGGTTTTCCCTCTGGACACGGTGAAGAAGAGAGT
GCAGACTGCGGGAGTTCCGAAGCGATACAACAGCATGTCGGAGTTCTTGC
GGCGCACGGCCCGCGAGTCCGGGTTCAGGGGACTGTTCAGGGGCGCGACA
CCGACGCTGGCCATGATCACCCCGCAGATGGGAGTGAGCTTCGCGGTGTG
GGAGGCCCTCAAGGGCGGCGCGCCCCTCGCGTTTTCTGGGTCGGGTTCGG
GTGCGTCGCCGGCGGCGGCGTTGTCGTGGCAGCTGGGCGCGGGCATGGTC
GCCGGGATGGTCGGGAAGCTGGTGGTTTTCCCTCTGGACACGGTGAAGAA
GAGAGTGCAGACTGCGGTGATGATGGAGCGCAACTCGGCCTACGGCGTTC
TCCCCAAGTACGCGGGACCCGTTCACGCGTTGAAGACGGTGTTGAGGGAG
GAGGGCGCCGCCGCGCTGTTCCGGGGAACGGTCCCCGCCATGTGGAAAAC
CGGGGTCTCGACCGCGGTGACCTATGCGGTGTACGAGTGGGTCAGGGCGG
GCACGGCTGTCACACTGGACTAAGTGATGATGGAGCGCAACTCGGCCTAC
GGCGTTCTCCCCAAGTACGCGGGACCCGTTCACGCGTTGAAGACGGTGTT
GAGGGAGGAGGGCGCCGCCGCGCTGTTCCGGGGAACGGTCCCCGCCATGT
GGAAAACCGGGGTCTCGACCGCGGTGACCTATGCGGTGTACGAGTGGGTC
AGGGCGGGCACGGCTGTCACACTGGACTAA
back to top