mRNA_E-siliculosus-1a_M_contig88.16840.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig88.16840.1 vs. uniprot
Match: D8LKE1_ECTSI (Similar to retinitis pigmentosa GTPase regulator n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKE1_ECTSI) HSP 1 Score: 1234 bits (3192), Expect = 0.000e+0 Identity = 878/971 (90.42%), Postives = 886/971 (91.25%), Query Frame = 2
Query: 458 KEPRICASVQETPKAVPLDRFVKKGDSPAFAAAGANHSILRTSEGKLFRWGVEDGDVHPFPTGVCTQIPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGKLGLQDAEKTVCIPQEVTFFSDKPLVQAAAGDFHMVALSRKREVFSWGYGAEGQGGHGSLLHMRMPRRVSSLQEVPVAQVVCGPWWSMAVTVDGYCYAWGSADGGWTGLKRPPGLRVVDPGPSTDRAVETQSFDSTHNVHVPALVYSLAPYKVLQVGCGGGHTLVVAKRRARPVSPGTNGEPGAVPTEVAGGGGAKAACP------------ESSPLISSLSPRVPSXXXXXXXXXXXXXXXXXXXXXXXXXXRNLSLSSVKHARQQXXXXXXXXXXXXXXXXXXXXRR----RRAPTGPDLTASTSESGWESGAVDEVATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARERVDAARVRSRANSVPVPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV----VRGADGRRASPIHGVALPAVPAAKSDGLRSAAVTAVPRRPESPVAXXXXXXXXXXDESPPEVTPGGRTGGRRFLSLPGGRASRSSSRTRDGGGGXXXXXXXXXXXXXXXXXVGXGKTVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVRCEEEYVAKVFSYCRHGRLAEVQEALGSGFDVCRRRDENGNTLLHCAAQNGLRGMCKSVLQEGRGQPLNVKNNRGNTALHYAFAFGFQQLGKYLASKGADDTLLNDQGLTCYEGLERQDLESL 3310
KEPRICASVQETPKAVPLDRFVKKGDSPAFAAAGANHSILRTSEGKLFRWGVEDGDVHPFPTGVCTQIPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGKLGLQDAEKTVCIPQEVTFFSDKPLVQAAAGDFHMVALSRKREVFSWGYGAEGQGGHGSLLHMRMPRRVSSLQEVPVAQVVCGPWWSMA+TVDGYCYAWGSADGGWTGL RPPGLRVVDPGPS DRAVETQSFDSTHNVHVPALVYSLAPYKVLQVGCGGGHTLVVAKRRARPVSPGTNG+PGAVPTEV GG ESSPL+SSLSPRVP XXXXXXXXXXXXXXXXXXXXXXX RN+SLSSVKHARQQXXXXXXXXXXXXXXXXXXXX RRAPTGPD+TASTSESGWESGAVDEVATAXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXA ER DAARVRSRANSV VPGG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VR ADGRRASP HGVALPAVPAAKSDGLRSAAV AVPRRPESPVAXXXXX DE PPEVTPGGR G R+FLSLPGGRASRSSSRT D XXXX G +A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AAVRCEEEYVAKVFSYCRHGRLAEVQEALGSGFDVCRRRDENGNTLLHCAAQNGLRGMCKSVLQEGRGQPLNVKNNRGNTALHYAFAFGFQQLGKYLASKGADD+LLNDQGLTCYEGLERQDLESL
Sbjct: 25 KEPRICASVQETPKAVPLDRFVKKGDSPAFAAAGANHSILRTSEGKLFRWGVEDGDVHPFPTGVCTQIPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGKLGLQDAEKTVCIPQEVTFFSDKPLVQAAAGDFHMVALSRKREVFSWGYGAEGQGGHGSLLHMRMPRRVSSLQEVPVAQVVCGPWWSMAITVDGYCYAWGSADGGWTGLTRPPGLRVVDPGPSADRAVETQSFDSTHNVHVPALVYSLAPYKVLQVGCGGGHTLVVAKRRARPVSPGTNGQPGAVPTEVPGGXXXXXXXXXXXXXXXXXXXXESSPLMSSLSPRVPXXXXXXXXXXXXXXXXXXXXXXXXA--RNVSLSSVKHARQQXXXXXXXXXXXXXXXXXXXXXXXXXXRRAPTGPDVTASTSESGWESGAVDEVATAXXXXXXXXXXXXXXXXXXKWASTXXXXXXXXXXXXXXXXXXXXXXXXXAGERFDAARVRSRANSVTVPGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRRADGRRASPAHGVALPAVPAAKSDGLRSAAVAAVPRRPESPVAXXXXXR----DEPPPEVTPGGRAGDRKFLSLPGGRASRSSSRTGDXXXXXXXXECAGRRRGGVEGQTG------SAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAVRCEEEYVAKVFSYCRHGRLAEVQEALGSGFDVCRRRDENGNTLLHCAAQNGLRGMCKSVLQEGRGQPLNVKNNRGNTALHYAFAFGFQQLGKYLASKGADDSLLNDQGLTCYEGLERQDLESL 983
BLAST of mRNA_E-siliculosus-1a_M_contig88.16840.1 vs. uniprot
Match: K8Z8W0_NANGC (Hect domain and rld 4 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z8W0_NANGC) HSP 1 Score: 356 bits (914), Expect = 2.970e-105 Identity = 180/381 (47.24%), Postives = 241/381 (63.25%), Query Frame = 2
Query: 479 SVQETPKAVPLDRFVKKGDSPAF-AAAGANHSILRTSEGKLFRWGVEDGDVHPFPTGVCTQIPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLG-ERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGKLGLQDAEKTVCIPQEVTFFSDKPLVQAAAGDFHMVALSRKREVFSWGYGAEGQGGHGSLLHMRMPRRVSSLQEVPVAQVVCGPWWSMAVTVDGYCYAWGSADGGWTGLKRPPGLRVVDPGPSTDRAVETQSFDSTHNVHVPALVYSLAPYKVLQVGCGGGHTLVVAKRRAR 1615
SV P+ + L+R+V + D A GA +I TS G ++WG +G +P P+ V +PL C++V CGRKH +ALM+GGFV SWG GYFGQLG GDN S PRL+ LDP RLG +RVV VACGG HSAV T VF +GFNRYGQ G G N + P V++S + ++ +++CGRHH++++T G +++WGA SFG+LGL D +K V +P EV F PL A GDFH++ L ++WGYG+EGQGG G+ LH+R PR V L+ +AQ+ CG WWSM VT G Y WG DGGW GL+R L V+P P + T SFDS N +PA+V +L+ +V +V GGGHT+++A+R R
Sbjct: 107 SVLHLPQPLALERYVAEEDGLVQDIACGATFTIALTSRGVPYQWGTVNGRAYPEPSRVSLGVPLRCLQVSCGRKHALALMEGGFVTSWGVGYFGQLGQGDNLSSDRPRLIHHLDPPRLGGDRVVAVACGGQHSAVHTAGQSVFCFGFNRYGQVGQGQACNKISTPRPVNMSGI---GSSQIRQLVCGRHHTSVLTDKGQVFSWGASSFGRLGLPDPKKIVGLPTEVPAFRCCPLAALACGDFHVLGLGVDGRAYAWGYGSEGQGGLGATLHLRTPRPVEGLEGSRIAQIACGAWWSMVVTEAGRLYTWGYGDGGWLGLERASKLPYVEPCPPVTKYGATCSFDSDFNACLPAVVSTLSHLRVEKVVAGGGHTIIMARRIQR 484
BLAST of mRNA_E-siliculosus-1a_M_contig88.16840.1 vs. uniprot
Match: W7U0Q3_9STRA (Putative e3 ubiquitin-protein ligase herc4 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0Q3_9STRA) HSP 1 Score: 356 bits (914), Expect = 5.920e-105 Identity = 180/381 (47.24%), Postives = 241/381 (63.25%), Query Frame = 2
Query: 479 SVQETPKAVPLDRFVKKGDSPAF-AAAGANHSILRTSEGKLFRWGVEDGDVHPFPTGVCTQIPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLG-ERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGKLGLQDAEKTVCIPQEVTFFSDKPLVQAAAGDFHMVALSRKREVFSWGYGAEGQGGHGSLLHMRMPRRVSSLQEVPVAQVVCGPWWSMAVTVDGYCYAWGSADGGWTGLKRPPGLRVVDPGPSTDRAVETQSFDSTHNVHVPALVYSLAPYKVLQVGCGGGHTLVVAKRRAR 1615
SV P+ + L+R+V + D A GA +I TS G ++WG +G +P P+ V +PL C++V CGRKH +ALM+GGFV SWG GYFGQLG GDN S PRL+ LDP RLG +RVV VACGG HSAV T VF +GFNRYGQ G G N + P V++S + ++ +++CGRHH++++T G +++WGA SFG+LGL D +K V +P EV F PL A GDFH++ L ++WGYG+EGQGG G+ LH+R PR V L+ +AQ+ CG WWSM VT G Y WG DGGW GL+R L V+P P + T SFDS N +PA+V +L+ +V +V GGGHT+++A+R R
Sbjct: 61 SVLHLPQPLALERYVAEEDGLVQDIACGATFTIALTSRGVPYQWGTVNGRAYPEPSRVSLGVPLRCLQVSCGRKHALALMEGGFVTSWGVGYFGQLGQGDNLSSDRPRLIHHLDPPRLGGDRVVAVACGGQHSAVHTAGQSVFCFGFNRYGQVGQGQACNKISTPRPVNMSGI---GSSQIRQLVCGRHHTSVLTDKGQVFSWGASSFGRLGLPDPKKIVGLPTEVPAFRCCPLAALACGDFHVLGLGVDGRAYAWGYGSEGQGGLGATLHLRTPRPVEGLEGSRIAQIACGAWWSMVVTEAGRLYTWGYGDGGWLGLERASKLPYVEPCPPVTKYGATCSFDSDFNACLPAVVSTLSHLRVEKVVAGGGHTIIMARRIQR 438
BLAST of mRNA_E-siliculosus-1a_M_contig88.16840.1 vs. uniprot
Match: A0A835Z434_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z434_9STRA) HSP 1 Score: 319 bits (818), Expect = 1.310e-94 Identity = 168/328 (51.22%), Postives = 207/328 (63.11%), Query Frame = 2
Query: 659 IPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGS-KDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGKLGLQDAEKTVCIPQEVTFFSDKPL--VQAAAGDFHMVALSRKREVFSWGYGAEGQGGHGSLLHMRMPRRVSSLQEVPVAQVVCGPWWSMAVTVDGYCYAWGSADGGWTGLKRPPG-LRVVDPGP-------STDRAVETQSFDSTHNVHVPALVYSLAPYKVLQVGCGGGHTLVVAKRR 1609
+PL +++ CGR+H+VALM+GGFVM+WG GYFGQLGHGDNAS +PRLL +L+PQ++ V VA GGYHS T AGR F WGFNRYGQCG G D V EP V L + G V CGRHH V GG +Y WGA FG+LG+ D K P EV + + V+ A G++H +A + + V+SWGYG +GQ GHG H+R PR V L+ PV QV CG WSMAVT G+ YAWG ADGGWTGL+ PPG LR V+PGP + A ++FDS H V +P V SL V V CGGGHTLV+A++R
Sbjct: 3 VPLAAVQIACGRRHSVALMEGGFVMTWGIGYFGQLGHGDNASCTNPRLLHQLEPQQI----VSVAAGGYHSVAVTRAGRGFAWGFNRYGQCGVGDCADAVVSEPRAVALRELRARGEG-VRAAACGRHHCVAVGTGGGVYAWGAGGFGRLGVADPPKVAPYPVEVGALRGQRVAEVRVACGEYHNLARTERGAVYSWGYGLDGQCGHGGAQHLRTPRIVERLKGNPVVQVACGSLWSMAVTSTGHLYAWGCADGGWTGLQCPPGVLRCVEPGPVAALDSEAGAAASSARTFDSDHIVLLPERVASLPGVAVEAVACGGGHTLVLARQR 325
BLAST of mRNA_E-siliculosus-1a_M_contig88.16840.1 vs. uniprot
Match: A0A4D9DAH8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAH8_9STRA) HSP 1 Score: 320 bits (819), Expect = 1.000e-92 Identity = 162/345 (46.96%), Postives = 215/345 (62.32%), Query Frame = 2
Query: 629 HPFPTGVCTQIPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLG-ERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGKLGLQDAEKTVCIPQEVTFFSDKPLVQAAAGDFHMVALSRKREVFSWGYGAEGQGGHGSLLHMRMPRRVSSLQEVPVAQVVCGPWWSMAVTVDGYC---------------YAWGSADGGWTGLKRPPGLRVVDPGPSTDRAVETQSFDSTHNVHVPALVYSLAPYKVLQVGCGGGHTLVVAKRRAR 1615
+P P+ V +PL C++V CGRKH +ALM+GG+V SWG GYFGQLG GDN S PRL+ LDP RLG +RVV VACGG HSAV T VF +GFNRYGQ G G N + P V++S + ++ +++CGRHH++++T G +++WGA SFG+LGL D +K V +P EV F PL A GDFH++ L ++WGYG+EGQGG G+ LH+R PR V L+ +AQ+ CG WWSM VT G Y WG DGGW GL+R L V+P P + T SFDS N +PA+V +L+ +V +V GGGHT+++A+R R
Sbjct: 28 YPEPSRVSLGVPLRCLQVSCGRKHALALMEGGYVTSWGVGYFGQLGQGDNLSSDRPRLIHHLDPPRLGGDRVVAVACGGQHSAVHTAGQSVFCFGFNRYGQVGQGQACNKISTPRPVNMSGI---GSSQIRQLVCGRHHTSVLTDKGQVFSWGASSFGRLGLPDPKKIVGLPTEVPAFRCCPLAALACGDFHVLGLGVDGRAYAWGYGSEGQGGLGATLHLRTPRPVEGLEGSRIAQIACGAWWSMVVTEAGCVGGKGRGGWRGVLVRLYTWGYGDGGWLGLERASKLPYVEPCPPVTKYGATCSFDSDFNACLPAVVSTLSHLRVEKVVAGGGHTIILARRIQR 369
BLAST of mRNA_E-siliculosus-1a_M_contig88.16840.1 vs. uniprot
Match: A0A7S3GVQ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GVQ9_9STRA) HSP 1 Score: 225 bits (573), Expect = 2.350e-63 Identity = 106/216 (49.07%), Postives = 146/216 (67.59%), Query Frame = 2
Query: 737 WGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNG----SKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGKLGLQDAEKTVCIPQEVTFFSDKPLVQAAAGDFHMVALSRKREVFSWGYGAEGQGGHGSLLHMRMPRRVSSLQEVPVAQVVCGPWWSMAVT 1372
WGTGYFGQLGHGD++S+ PR++ L+P+RLG +V+ VACGG HS V TD+GRVF WG NR GQCG G K ++V EP VD S + V ++ GR+HSA+++ G ++TWG FG+LGL D +KT IP EV FS P+V +AGDFHM+AL++ +V+SWGYG +GQ GH +L++R PRR+ + + V CG +S+ +T
Sbjct: 1 WGTGYFGQLGHGDDSSWDSPRMISVLEPKRLGAKVINVACGGSHSGVITDSGRVFMWGLNRSGQCGQGLSAKGKSDSVLEPRPVDFSHLANHGTLGVKSLVLGRNHSAMLSTTGRVFTWGEAGFGRLGLNDVKKTQLIPAEVMAFSKNPVVTLSAGDFHMLALTQDGQVYSWGYGVDGQTGHCVMLNVRCPRRIDFFDTMHIRDVCCGAGYSLVLT 216
BLAST of mRNA_E-siliculosus-1a_M_contig88.16840.1 vs. uniprot
Match: B7G795_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G795_PHATC) HSP 1 Score: 165 bits (418), Expect = 5.100e-41 Identity = 100/302 (33.11%), Postives = 153/302 (50.66%), Query Frame = 2
Query: 551 AAGANHSILRTSEGKLFRWGVED------GD-----VHPFPTGVCTQIPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGKLGLQDAEKTVCIPQEVTFFSDKPLVQAAAGDFHMVALSRKREVFSWGYGAEGQGGHGSLLHMRMPRRVSSLQEVPVAQVVCGPWWSMAVTVDGYCYAWGSADGGWTG 1423
A G+ H+++ T++G++F WG D GD V + QI L +V CG HT A+ G + +WG G +G+LGHGD A + P+ + L +G V Q+ACG H+A+ T +G ++TWG G G+G + P L++ A V ++ H+A+VT G L+TWG FG+LG +E+ P V + K Q + G FH +S ++++G G GQ GH ++ P V +L + V+Q+ CG S+A+TV G Y WG+ D G G
Sbjct: 39 ACGSGHTVVLTTDGEVFTWGRGDDGRLGHGDNGWKYVPRMTQSLAGQIVL---QVTCGSYHTAAVTGNGDLYTWGGGMYGKLGHGDEAGHATPKRVEAL----VGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETEGHQYLPRLLESM-----AAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLGHM-SERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPTFVEALDGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLG 327
BLAST of mRNA_E-siliculosus-1a_M_contig88.16840.1 vs. uniprot
Match: A0A2C9URU1_MANES (Uncharacterized protein n=4 Tax=Crotonoideae TaxID=235631 RepID=A0A2C9URU1_MANES) HSP 1 Score: 160 bits (406), Expect = 1.890e-38 Identity = 112/362 (30.94%), Postives = 173/362 (47.79%), Query Frame = 2
Query: 551 AAGANHSILRTSEGKLFRWGV-EDGDV-------HPFPTGVCTQIPLPCIEVCCGRKHTVALMKG-GFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGKLGLQDAEKTVCIPQEVTFFSDKPLVQAAAGDFHMVALSRKREVFSWGYGAEGQGGHGSLLHMRMPRRVSSLQEVPVAQVVCGPWWSMAVTVDGYCYAWGSADGGWTGLKRPPGLRVVDPGPSTDRAVETQSFDSTHNVHVPALVYSLAPYKVLQVGCGGGHTLVVAKRR 1609
+AGA+HS+ S + WG EDG + P PT + T L + V CG HT+A + V SWG G FG+LGHG+++ P+ +R L G R+ Q+ACG H T G+V +WG N+ GQ G G+ ++++ + ++ + V G H+A VT G LY WG +G LGL D + +P++V+ + +V A G H +++S ++++G+ GQ GHG +P ++ +LQ ++Q+ G +MAVT DG Y WG G G+ G + D S V P KV+Q+ CG HTL V +++
Sbjct: 20 SAGASHSVALLSGNIVCTWGRGEDGQLGHGDAEDRPSPTQLNTLDGLEIVSVTCGADHTIAYSESHANVYSWGWGDFGRLGHGNSSDLFTPQPIRALH----GLRIKQIACGDSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQKIP------IKMVAAGAEHTAAVTESGELYGWGWGRYGNLGLGDRRDRL-VPEKVSLSHGEKMVMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFADHLIPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGV-----------GDNVDHC-------SPEQVKFPN------EQKVIQISCGWRHTLAVTEQQ 346
BLAST of mRNA_E-siliculosus-1a_M_contig88.16840.1 vs. uniprot
Match: J3LDS2_ORYBR (Uncharacterized protein n=15 Tax=Oryzinae TaxID=1648021 RepID=J3LDS2_ORYBR) HSP 1 Score: 160 bits (404), Expect = 3.460e-38 Identity = 109/368 (29.62%), Postives = 173/368 (47.01%), Query Frame = 2
Query: 536 SPAFAAAGANHSILRTSEGKLFRWGV-EDGDV-------HPFPTGVCTQIPLP-CIEVCCGRKHTVALMKGGFVM-SWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGKLGLQDAEKTVCIPQEVTFFSDKPLVQAAAGDFHMVALSRKREVFSWGYGAEGQGGHGSLLHMRMPRRVSSLQEVPVAQVVCGPWWSMAVTVDGYCYAWGSADGGWTGLKRPPGLRVVDPGPSTDRAVETQSFDSTHNVHVPALVYSLAPYKVLQVGCGGGHTLVVAKRR 1609
S +AGA+HS+ + G + WG EDG + P PT + + P + V CG HT A + SWG G FG+LGHG+++ +P+ ++ L G RV Q+ACG H T AG V +WG N+ GQ G G+ D+++ + V V + G H+A VT G LY WG +G LGL D + + IP++V+ + +V A G H + +S ++++G+ GQ GHG +P ++ +L++ ++Q+ G +MA+ DG Y WG G G+ + + S +V+ P K++QV CG HTL + + +
Sbjct: 20 SVVLISAGASHSVALLTGGVVCSWGRGEDGQLGHGDAEDRPAPTALTAALAAPGIVSVICGADHTTAYCDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQ----GVRVAQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTDDSLIPQKIQAFEGV------RVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRL-IPEKVSSVEGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVG------------------DNEDHCSPVHVNFPN------GQKIVQVACGWRHTLALTETK 352
BLAST of mRNA_E-siliculosus-1a_M_contig88.16840.1 vs. uniprot
Match: D8SKI2_SELML (Uncharacterized protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SKI2_SELML) HSP 1 Score: 159 bits (401), Expect = 7.700e-38 Identity = 118/362 (32.60%), Postives = 169/362 (46.69%), Query Frame = 2
Query: 557 GANHSILRTSEGKLFRWGVEDGDVHPFPTGVCTQIPL--PCIE----VCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNR-YGQCGNGSKDNTVPEPSLVD---LSRVTPGAVGEVP--KVLCGRHHSALVTRGGALYTWGACSFGKLGLQDAEKTVCIPQEVTFFSDKPLVQAAAGDFHMVALSRKREVFSWGYGAEGQGGHGSLLHMRMPRRVSSLQEVPVAQVVCGPWWSMAVTVDGYCYAWGSADGGWTGLKRPPGLRVVDPGPSTDRAVETQSFDSTHNVHVPALVYSLAPYKVLQVGCGGGHTLVVAKR 1606
G HS+L +E +F WG DG T P P I+ G H +AL + G V +WG G FG LGHG PRLL P + +R+V V+ GG HSA T++G ++TWG + G+ G+G+ P ++D LSR T +VP V CG + +T+ G L++WG + +LG P+ V D LVQ A G FH AL++ +V +WGYG GQ GHG+L + + P V ++ + + CGP W+ A+T +G Y WG G+ PGL+ P V P ++ P +VL V CG H + + R
Sbjct: 94 GLFHSVL-FAEQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKRVQMASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLE--GPWK--DRIVHVSAGGSHSAAVTESGELYTWGRDEGEGRLGHGN-------PDIMDEGALSRPTKVQALDVPIASVYCGGFFTMALTKSGQLWSWGGNANHELG-HGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRDYQLGI---PGLKDEQLDPVL--------------VQFPQALHEKTPVEVLGVSCGANHGVCIVSR 425 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig88.16840.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig88.16840.1 >prot_E-siliculosus-1a_M_contig88.16840.1 ID=prot_E-siliculosus-1a_M_contig88.16840.1|Name=mRNA_E-siliculosus-1a_M_contig88.16840.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1041bp MPSLGAPILLSFGVGFSYQLGLEEPPESSKRRAKEGGGPERKETPTRSGDback to top mRNA from alignment at E-siliculosus-1a_M_contig88:532081..546711- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig88.16840.1 ID=mRNA_E-siliculosus-1a_M_contig88.16840.1|Name=mRNA_E-siliculosus-1a_M_contig88.16840.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=14631bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig88:532081..546711- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig88:532081..546711- >mRNA_E-siliculosus-1a_M_contig88.16840.1 ID=mRNA_E-siliculosus-1a_M_contig88.16840.1|Name=mRNA_E-siliculosus-1a_M_contig88.16840.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=6246bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig88:532081..546711- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |