mRNA_E-siliculosus-1a_M_contig88.16822.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig88.16822.1
Unique NamemRNA_E-siliculosus-1a_M_contig88.16822.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig88.16822.1 vs. uniprot
Match: A0A6H5J856_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J856_9PHAE)

HSP 1 Score: 358 bits (920), Expect = 2.080e-124
Identity = 174/177 (98.31%), Postives = 176/177 (99.44%), Query Frame = 1 
Query:   49 MNLKEHVLEELELHEYYVRDALQCLLHTILFVRAPGSLRPRESHCENFGLSFARCGARDVDVAVDGALEDFWRSLRPAGPDLSKGWIAVSFFMRREKKSFGLFLKEEKVVWEQWVVPVLVNTSPRPTEADDTSVLARGRLQEMAVRLVQGRMLDILTSVNDCIDHVPPVGTEYEFEV 579
            MNLKEHVLEELELHEYYVRDALQCLLHTILFVRAPGSLRPRESHCENFGLSFARCGARDVDVAVD ALE+FWRSLRPAGPDLSKGWIAVSFFMRREKKSFGLFLKEEKVVWEQWVVPVLVNTSPRPTEADDTSVLARGRLQEMAVRLVQGRMLDILTSVNDCIDHVPPVGTEYEFE+
Sbjct:    1 MNLKEHVLEELELHEYYVRDALQCLLHTILFVRAPGSLRPRESHCENFGLSFARCGARDVDVAVDRALEEFWRSLRPAGPDLSKGWIAVSFFMRREKKSFGLFLKEEKVVWEQWVVPVLVNTSPRPTEADDTSVLARGRLQEMAVRLVQGRMLDILTSVNDCIDHVPPVGTEYEFEM 177
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BLAST of mRNA_E-siliculosus-1a_M_contig88.16822.1 vs. uniprot
Match: D8LK81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK81_ECTSI)

HSP 1 Score: 279 bits (714), Expect = 4.980e-94
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 1 
Query:   49 MNLKEHVLEELELHEYYVRDALQCLLHTILFVRAPGSLRPRESHCENFGLSFARCGARDVDVAVDGALEDFWRSLRPAGPDLSKGWIAVSFFMRREKKSFGLFLKEEKVVWEQWVVPVLVNTSPRPTEADDTSV 450
            MNLKEHVLEELELHEYYVRDALQCLLHTILFVRAPGSLRPRESHCENFGLSFARCGARDVDVAVDGALEDFWRSLRPAGPDLSKGWIAVSFFMRREKKSFGLFLKEEKVVWEQWVVPVLVNTSPRPTEADDTSV
Sbjct:    1 MNLKEHVLEELELHEYYVRDALQCLLHTILFVRAPGSLRPRESHCENFGLSFARCGARDVDVAVDGALEDFWRSLRPAGPDLSKGWIAVSFFMRREKKSFGLFLKEEKVVWEQWVVPVLVNTSPRPTEADDTSV 134
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BLAST of mRNA_E-siliculosus-1a_M_contig88.16822.1 vs. uniprot
Match: A0A7S2UB45_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UB45_9STRA)

HSP 1 Score: 170 bits (430), Expect = 8.670e-50
Identity = 89/189 (47.09%), Postives = 118/189 (62.43%), Query Frame = 1 
Query:   49 MNLKEHVLEELELHEYYVRDALQCLLHTILFVRAPGSLRPRESHCENFGLSFARCGAR----------DVDVAVDGALEDFWRSLRPAGPDLSKGWIAVSFFMRREKKS-FGLFLKEEKVVWEQWVVPVLVNTSPRPTEADDTSVLARGRLQEMAVRLVQGRMLDILTSVNDCIDHVPPVGTEYEFEVR 582
            MN KEH L ELEL  Y VR+ALQC+LHTILF+R+PG + PR+ HCE F L++ R  +           DVD  VD A+E F RSL   GP+L  G + +SFF RR  +  FGL   E+K++WEQW++ V+VN +PRP   D  SV+ R R+Q+ A  +++  +L I       IDHVPPV   YEFE+ 
Sbjct:    1 MNCKEHHLPELELATYQVREALQCILHTILFIRSPGPVAPRDVHCEGFDLTYTRIASDSENRSNRLEFDVDKKVDDAIESFLRSLSQIGPELLSGCLTLSFFERRATRQLFGLVSHEDKIIWEQWILRVVVNNTPRPVNDDKASVIERQRIQDTAEGMLKFVLLKIFDISGGAIDHVPPVM--YEFEIN 187
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BLAST of mRNA_E-siliculosus-1a_M_contig88.16822.1 vs. uniprot
Match: A0A835ZG30_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG30_9STRA)

HSP 1 Score: 164 bits (415), Expect = 8.390e-47
Identity = 97/203 (47.78%), Postives = 122/203 (60.10%), Query Frame = 1 
Query:   49 MNLKEHVLEELELHEYYVRDALQCLLHTILFVRAPGSLRPRESHCENFGLSFARCGA-----------RDVDVAVDG----------------ALEDFWRSLRP--------AGPDLSKGWIAVSFFMRREKKS-FGLFLKEEKVVWEQWVVPVLVNTSPRPTEADDTSVLARGRLQEMAVRLVQGRMLDILTSVNDCIDHVP 549
            MNLKEHVLEE+ELHE +VRDALQCLLHTILFVRAPG LRPRE+HC+ F L++AR              R + V V                  A +   + L+P          PDLSKGW+ +SFF RR KK+ FGL   EEK+ WEQWVVPVLV+ +P PT AD+ S LAR RL+E     +  R+ D+++  N  I+ +P
Sbjct:    1 MNLKEHVLEEVELHESHVRDALQCLLHTILFVRAPGPLRPREAHCDYFDLTYARYAPTWNRHLPTDSNRVLTVLVXXXXXXXXXXXXXXXXVRAHDPQHQPLKPLVKDLLAACWPDLSKGWVTLSFFERRIKKTMFGLMSNEEKIAWEQWVVPVLVSGAPLPTGADEASELARQRLKEHTEEALAARIEDVVSFANGPINCMP 203
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BLAST of mRNA_E-siliculosus-1a_M_contig88.16822.1 vs. uniprot
Match: A0A7S1ZEN7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZEN7_TRICV)

HSP 1 Score: 160 bits (404), Expect = 8.920e-46
Identity = 86/195 (44.10%), Postives = 115/195 (58.97%), Query Frame = 1 
Query:   49 MNLKEHVLEELELHEYYVRDALQCLLHTILFVRAPGSLRPRESHCENFGLSFARCG-----------------ARDVDVAVDGALEDFWRSLRPAGPDLSKGWIAVSFFMRREKKS-FGLFLKEEKVVWEQWVVPVLVNTSPRPTEADDTSVLARGRLQEMAVRLVQGRMLDILTSVNDCIDHVPPVGTEYEFEV 579
            MN  EH L ELEL    VR+ALQ +LHTILF+R+PG + PR+ HCE F L+++R                     D+D  VD ++E F RSL   GP+L  G + +SFF RR  +  FGL   EE+VVWEQW++ V+VN +PRP   D  SV+ R R+Q+ A  +++  ML I       IDH+PPV   YEFE+
Sbjct:    1 MNCVEHYLPELELATGQVREALQAILHTILFIRSPGPVAPRDIHCEGFDLTYSRIANDDGNQVAVVSGPAVVQENDIDKKVDDSIEVFLRSLSQIGPELLSGCLTLSFFERRASRQLFGLVSHEERVVWEQWILRVVVNNTPRPVNDDSASVIERQRIQDTAEGMLKSAMLKIFELAGGSIDHIPPVM--YEFEI 193
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BLAST of mRNA_E-siliculosus-1a_M_contig88.16822.1 vs. uniprot
Match: A0A7R9UCW6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCW6_9STRA)

HSP 1 Score: 159 bits (403), Expect = 9.980e-46
Identity = 83/186 (44.62%), Postives = 116/186 (62.37%), Query Frame = 1 
Query:   49 MNLKEHVLEELELHEYYVRDALQCLLHTILFVRAPGSLRPRESHCENFGLSFARCGARDVDVAVD--------GALEDFWRSLRPAGPDLSKGWIAVSFFMRRE-KKSFGLFLKEEKVVWEQWVVPVLVNTSPRPTEADDTSVLARGRLQEMAVRLVQGRMLDILTSVNDCIDHVPPVGTEYEFEV 579
            MN+ EH+L+E+E+ ++ +++ L  +LHTILF+RAPG  RP E   E F  S+  CGA D+  AV+        G  E+   +L PAGP+L KG + +SFF +R   + FGL   EEKVVWEQW +PVL++T+PRP   D  SV+ R R  + A  ++Q RM+ I    N   DH+PPV   YEFE+
Sbjct:    1 MNITEHILDEVEVEQWQMKEMLSAILHTILFLRAPGPSRPTEVAMERFDKSYVTCGAEDISRAVEESIDGLCEGLSEEPTGALEPAGPELWKGCMVLSFFEKRSIPQLFGLVNNEEKVVWEQWRIPVLISTTPRPMGDDTASVIERQRQAQQAEAMLQARMMQIFEFANGHFDHLPPVA--YEFEI 184
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BLAST of mRNA_E-siliculosus-1a_M_contig88.16822.1 vs. uniprot
Match: A0A7S0FIE9_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FIE9_9STRA)

HSP 1 Score: 158 bits (399), Expect = 7.350e-45
Identity = 91/211 (43.13%), Postives = 119/211 (56.40%), Query Frame = 1 
Query:   49 MNLKEHVLEELELHEYYVRDALQCLLHTILFVRAPGSLRPRESHCENFGLSFARC----GAR--------------------------DVDVAVDGALEDFWRSLRPAGPDLSKGWIAVSFFMRREKKS-FGLFLKEEKVVWEQWVVPVLVNTSPRPTEADDTSVLARGRLQEMAVRLVQGRMLDILTSVNDCIDHVPPVGTEYEFEVRLS 588
            MN KEH L ELEL    VR+ALQ  LHTILF+R+PG + PR+ HCE F L++ R     G R                          D+D  VD A+E+F RSL   GP+L  G + +SFF RR  K  FGL   EE+VVWEQW++ V+VN +PRP   D  SV+ R R+Q+ A RL++  +L +       IDHVPPV   +EF++  S
Sbjct:    1 MNCKEHHLPELELATGQVREALQTALHTILFIRSPGPVAPRDVHCEGFDLTYTRIETPDGQRSWSQQAAGGGVGGVGGGVQQQIALESDLDRRVDDAIENFLRSLTQIGPELLSGCLTLSFFERRASKQLFGLMNHEERVVWEQWIIRVVVNNTPRPVGEDSASVIERQRMQDTAERLLKSALLKVFEITGGDIDHVPPVM--FEFDISCS 209
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BLAST of mRNA_E-siliculosus-1a_M_contig88.16822.1 vs. uniprot
Match: A0A7S2I1L3_9STRA (Hypothetical protein n=2 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2I1L3_9STRA)

HSP 1 Score: 155 bits (393), Expect = 4.810e-44
Identity = 86/202 (42.57%), Postives = 116/202 (57.43%), Query Frame = 1 
Query:   49 MNLKEHVLEELELHEYYVRDALQCLLHTILFVRAPGSLRPRESHCENFGLSFARCGARD------------------------VDVAVDGALEDFWRSLRPAGPDLSKGWIAVSFFMRREKKS-FGLFLKEEKVVWEQWVVPVLVNTSPRPTEADDTSVLARGRLQEMAVRLVQGRMLDILTSVNDCIDHVPPVGTEYEFEV 579
            MN +EH + ELEL    VR+ALQ +LHTILF+R+PG + PR+ +CE F L++ R    D                        VD  VDGA+E F RSL   GP+L  G + ++FF RR  +  FGL   EE+VVWEQW++ V+VN +PRP   D  SV+ R R+Q+ A  +++  ML +       IDHVPPV   YEFE+
Sbjct:    1 MNCREHHIPELELATGQVREALQAILHTILFIRSPGPVAPRDVNCEGFDLTYNRIATNDGTPPTSTRSLDGRTISRSSSLENDVDKKVDGAIEVFLRSLTQIGPELLSGCLTLAFFERRATRQLFGLVSHEERVVWEQWILRVVVNNTPRPVNDDKASVIERQRIQDTAENMLKSAMLKVFEITGGEIDHVPPVM--YEFEI 200
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BLAST of mRNA_E-siliculosus-1a_M_contig88.16822.1 vs. uniprot
Match: A0A1Z5KIE0_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KIE0_FISSO)

HSP 1 Score: 152 bits (383), Expect = 1.370e-42
Identity = 83/200 (41.50%), Postives = 116/200 (58.00%), Query Frame = 1 
Query:   49 MNLKEHVLEELELHEYYVRDALQCLLHTILFVRAPGSLRPRESHCENFGLSFARCG-------------------ARDVDVAVDGALEDFWRSLRPAGPDLSKGWIAVSFFMRREKKS-FGLFLKEEKVVWEQWVVPVLVNTSPRPTEADDTSVLARGRLQEMAVRLVQGRMLDILTSVNDCIDHVPPVGTEYEFEVRLS 588
            MN KEH L ELEL    VR ALQC+LHTILF+R+PG + P++  CE+F L++AR                       D+D  VD A+E F R+L   GP+L  G + VSFF RR  +  FGL   EE+VV+EQWV+ ++VN +PRP   D  +++ R R+Q+ A  +++  +  I       IDH+PPV   YEF++  S
Sbjct:    1 MNCKEHYLPELELSTAQVRSALQCILHTILFLRSPGPVTPKDVECEDFNLTYARIANNHQNQPPNKAMGNIVHSLENDIDQKVDDAIESFLRTLSQIGPELLSGCLTVSFFERRATRQLFGLVSHEERVVFEQWVIRLVVNNTPRPISNDSAALMERQRIQDTAEGMLRSVLSKIFEITGGPIDHLPPVM--YEFDISCS 198
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BLAST of mRNA_E-siliculosus-1a_M_contig88.16822.1 vs. uniprot
Match: K0SBE9_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SBE9_THAOC)

HSP 1 Score: 149 bits (377), Expect = 1.190e-41
Identity = 82/202 (40.59%), Postives = 118/202 (58.42%), Query Frame = 1 
Query:   49 MNLKEHVLEELELHEYYVRDALQCLLHTILFVRAPGSLRPRESHCENFGLSFARCGARD------------------------VDVAVDGALEDFWRSLRPAGPDLSKGWIAVSFFMRREKKS-FGLFLKEEKVVWEQWVVPVLVNTSPRPTEADDTSVLARGRLQEMAVRLVQGRMLDILTSVNDCIDHVPPVGTEYEFEV 579
            MN   H L ELE     VR+AL  ++HT+LF+R+PG + P + HCE+FGL++ R    +                        +D  VDG++E+F ++L P GP+L  G +A+SFF RR KK  FGL + EEKV +EQW+V VLVN +PRPT  D+ SV+ R R+Q+ A  +++  ML I    N   DHVP   + Y+F++
Sbjct:    1 MNCHIHQLPELETATLAVREALAAVIHTVLFIRSPGPVSPFDVHCESFGLTYTRIATENDPLHGIVTGGASRRQNKSTSSYQQLDRKVDGSIEEFLQTLTPIGPELMAGNLAISFFERRPKKQLFGLHITEEKVPFEQWIVRVLVNNTPRPTGEDEASVIERQRIQDTAEGMLKAVMLKIFELANIYTDHVP--SSMYDFDI 200
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig88.16822.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J856_9PHAE2.080e-12498.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK81_ECTSI4.980e-94100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2UB45_9STRA8.670e-5047.09Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A835ZG30_9STRA8.390e-4747.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1ZEN7_TRICV8.920e-4644.10Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7R9UCW6_9STRA9.980e-4644.62Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S0FIE9_9STRA7.350e-4543.13Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S2I1L3_9STRA4.810e-4442.57Hypothetical protein n=2 Tax=Lithodesmiaceae TaxID... [more]
A0A1Z5KIE0_FISSO1.370e-4241.50Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
K0SBE9_THAOC1.190e-4140.59Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig88contigE-siliculosus-1a_M_contig88:330198..334295 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop0
Cds size633
Model size633
Exons6
Ec32 orthologEc-16_002380.1
Ec32 ortholog descriptionAutophagy-related protein 1010
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko04131
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.A
EggNOG OGsKOG4493@1,KOG4493@2759
EggNOG free text desc.process utilizing autophagic mechanism
GOsGO:0000045,GO:0000407,GO:0002165,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0006914,GO:0006996,GO:0007033,GO:0007275,GO:0007552,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009653,GO:0009791,GO:0009886,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010506,GO:0010508,GO:0010623,GO:0012501,GO:0012505,GO:0016020,GO:0016043,GO:0016236,GO:0016239,GO:0016241,GO:0019222,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0022607,GO:0030154,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031984,GO:0032501,GO:0032502,GO:0032991,GO:0034045,GO:0035069,GO:0035096,GO:0035973,GO:0042175,GO:0042802,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0046983,GO:0048468,GO:0048518,GO:0048522,GO:0048707,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0060033,GO:0061695,GO:0061912,GO:0061919,GO:0065007,GO:0070925,GO:0071840,GO:0098805,GO:0098827,GO:1902494,GO:1902554,GO:1902911,GO:1905037,GO:1990234,GO:1990316
KEGG Pathwayko04136,ko04140,ko04211,map04136,map04140,map04211
KEGG koko:K19730
Preferred nameATG101
Seed eggNOG ortholog2880.D8LK81
Seed ortholog evalue5.3e-73
Seed ortholog score280.8
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig88.16822.1prot_E-siliculosus-1a_M_contig88.16822.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig88 330198..334295 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936348.5349677-CDS-E-siliculosus-1a_M_contig88:330197..3303821622936348.5349677-CDS-E-siliculosus-1a_M_contig88:330197..330382Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig88 330198..330382 -
1696251037.0269299-CDS-E-siliculosus-1a_M_contig88:330197..3303821696251037.0269299-CDS-E-siliculosus-1a_M_contig88:330197..330382Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig88 330198..330382 -
1622936348.613988-CDS-E-siliculosus-1a_M_contig88:331500..3316151622936348.613988-CDS-E-siliculosus-1a_M_contig88:331500..331615Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig88 331501..331615 -
1696251037.0434597-CDS-E-siliculosus-1a_M_contig88:331500..3316151696251037.0434597-CDS-E-siliculosus-1a_M_contig88:331500..331615Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig88 331501..331615 -
1622936348.6335194-CDS-E-siliculosus-1a_M_contig88:332057..3321531622936348.6335194-CDS-E-siliculosus-1a_M_contig88:332057..332153Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig88 332058..332153 -
1696251037.058916-CDS-E-siliculosus-1a_M_contig88:332057..3321531696251037.058916-CDS-E-siliculosus-1a_M_contig88:332057..332153Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig88 332058..332153 -
1622936348.6508307-CDS-E-siliculosus-1a_M_contig88:332740..3328031622936348.6508307-CDS-E-siliculosus-1a_M_contig88:332740..332803Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig88 332741..332803 -
1696251037.0699363-CDS-E-siliculosus-1a_M_contig88:332740..3328031696251037.0699363-CDS-E-siliculosus-1a_M_contig88:332740..332803Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig88 332741..332803 -
1622936348.6699529-CDS-E-siliculosus-1a_M_contig88:333357..3334501622936348.6699529-CDS-E-siliculosus-1a_M_contig88:333357..333450Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig88 333358..333450 -
1696251037.0806525-CDS-E-siliculosus-1a_M_contig88:333357..3334501696251037.0806525-CDS-E-siliculosus-1a_M_contig88:333357..333450Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig88 333358..333450 -
1622936348.6872969-CDS-E-siliculosus-1a_M_contig88:334214..3342951622936348.6872969-CDS-E-siliculosus-1a_M_contig88:334214..334295Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig88 334215..334295 -
1696251037.095757-CDS-E-siliculosus-1a_M_contig88:334214..3342951696251037.095757-CDS-E-siliculosus-1a_M_contig88:334214..334295Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig88 334215..334295 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig88.16822.1

>prot_E-siliculosus-1a_M_contig88.16822.1 ID=prot_E-siliculosus-1a_M_contig88.16822.1|Name=mRNA_E-siliculosus-1a_M_contig88.16822.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=211bp
MRTGRADPHQQHTEREMNLKEHVLEELELHEYYVRDALQCLLHTILFVRA
PGSLRPRESHCENFGLSFARCGARDVDVAVDGALEDFWRSLRPAGPDLSK
GWIAVSFFMRREKKSFGLFLKEEKVVWEQWVVPVLVNTSPRPTEADDTSV
LARGRLQEMAVRLVQGRMLDILTSVNDCIDHVPPVGTEYEFEVRLSFCVF
FSAVVAIFVCP
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mRNA from alignment at E-siliculosus-1a_M_contig88:330198..334295-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig88.16822.1 ID=mRNA_E-siliculosus-1a_M_contig88.16822.1|Name=mRNA_E-siliculosus-1a_M_contig88.16822.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=4098bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig88:330198..334295- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGAGAACGGGCCGAGCCGACCCACACCAACAGCACACGGAAAGAGAGAT
GAACTTGAAGGAGCACGTTCTGGAAGAGCTGGTGAGAGACGCTGCGTCTG
CGGGGAGTTGTGTTATGTGGCTTGTGTGTGACGGGCGCTGACAGACCAAC
GCGTTTGTGGGAGGAGGGAAAAACGAGACAACAATTCCCAATAAATATAC
TCCGTCTCTCTTCCGATGTCGCTCCGATAGACACACTCAGCGTAGATGCT
TTCCTAGTACTTGCTGCTGTACAACGGCTTGCTTGCGCGAAGGTTTTCGT
CGCTTGCGCTGGTAGCGTGTGGTGTCTGTAGCCATGGCCATCTGGGCCAG
TCCCTTCTTGCTCCTGTCGACGTTTCCCCGCAGTGCCCGTGTGTTGGCGT
GCAGTTTACACTACACCTTGTGAGTAGACTCATCCATCTGATAAATGTGC
ACGCAAGGAACTCTGGAGTGTTTTTTACTTGAAATATGTACAGTGTTCAA
CCGTTATTTGGTTGGGCACTGCAGTCAGCACAGGTGGTGTGTCGATGCCG
GCTTGCGAGTAGAAAAATACCTACGGCGACAGCGCACAATCGCACGCCAC
TCAGTACTGCCGCACAATGCACCCTTTCGTACAGCAATGGTGCATGGATT
TTTATTTGTGTATGGCGTGGGTTTTTTCCAGGAAGTCTCGTGCACATTGA
TGTAACCAGCTGTTGGTATGCGTACAAGTGTAGTCTAGCCCTGCCCGTAT
CCCTATTATTCTATTATTGCCCCTGTTGTTGAGCTGATCGATGTTTCTCC
ACGTTAATCATGTACCGTGTGGCTTTTTCTCTTTTTTTCGCGCAGGAGCT
CCACGAGTACTATGTGCGGGACGCTCTGCAGTGCCTGCTGCACACGATAC
TCTTTGTTCGGGCACCCGGGTCTCTCCGCCCCAGAGAGGTAGGCGAGCGA
GCGAGCGAGCGAAGCAAAAAAGCGGTCTTGATGTGTTGTTAGATGTCGCT
GTCGTTATCGTTGTCGGTACGCCCGAAAGTCGCTTTGAAAGCGCCCCCCT
CCTTGCTCTCTCTTTCTTCCAAGCCAAGAAGGCATACCAAATTTTCGTCG
TCACGGGCTACTTACGAGAGGTTACGCCAAACCCAGGAGGCTTAAAAGTG
ACGTGCCATGTTTGTCGAATTGTAGTTGTGGGTCTGTCCCCCCCAAGTTG
TCGGAGCCTCTGCCTTTGCACCCGGTCTCCCTAACTGCCCCACCTCTGCC
CCCCCGATCCCCAACTACCATATTTTGTGGTCCCGTGGATAACCAACCCC
ACCCACCCCTCTTGAATCTGTGTGTGTCTGCATCTCTCGATCTCACTCCT
TCTGCGTCTGTTTTTTTCTCTCTCTCTCTCCCTCTCTGTCTGCCTCTGCC
TGTCTTGCTCGCTCTGTGCGTGTCTGTTTCTCTCTCTCCCTCTCTCTCTC
TGTTGTCTTGGTTATGTCATCACGCTTCTTCTCCGGTGGCAGTCACACTG
CGAGAACTTCGGGCTGTCCTTCGCTAGGTGCGGGGCTCGCGACGTCGACG
TAGCGGTAAGAGGCATGCAAGCACCCGTAGATATCTACGTTCTGAGAACA
CGCACTGCTGCCTGCCTGCCTGCCTGCCTGCCTGCGGTGGGCTTGACCCC
ACACTCGCGGTCTGTTGTCTGCCATGTCCTCGTGTGTACTATCGTTTCCT
CGGGCGTACTGTGTGCTGGTGATTGTGTGTGTGTGTGTGTGTTGCTTTGT
AGTCATGAACCGCGCTCTCCGACTGACCAATGAAATGTGTTGCAGGGTCT
TGTAGCGGATTGCTCGCTCACACGTGTGTTACTGTAACATGGAAGTAGTT
GGAATGGACCCCTCCAACCGGTTGACCAGTGCAATTACGTCAGCAGTGTA
TTTTCTCCGTTTTTTCTTTTGGGAGCATCGACCAATGTGACCGGAAGACA
AGACGGGACAGACCCCAAAATATTTTCTGGTCGGCGGTGTCCTCCCAGAC
AGGGACCCCGTTGGCGGGGGGTGGGGGGTGGAGGCCTGTGACTATGTGTG
TGTTTGTAGATGGTGCGTTTGGTTTTTGTTGGCGTCGCTTCGCGAGTTTC
TCCGCAAAACCCCGCAATTTTCTTCTCTCTTGTCGACGGCAGGTGGACGG
AGCGCTGGAAGATTTTTGGCGTAGTCTTAGGCCAGCAGGACCCGACCTCT
CCAAAGGGTGGATCGCAGTGAGCTTCTTCATGCGAAGAGTGAGTGACTTC
GGAGTCCTTGGAGGGCAGGGTGTGAAAGGGGAGTGCTCACGGCTCGACGC
GACTGGTGTTGTCTCCCGAAGGAGCGTATGCTTATTTCGTTGTTGGATAT
ATATCCTTGACCGCCGCGTCTTCACCCCTCTCCCATTAGACACCACGGCC
CCGACGACATATTTCGTTGCTTCCTTCCGGGGAGGGTGTTGTCTACCGTA
TGTAAACAGACACACACGTCGGTTCGGCCTTGACGGTCAAGGTTCCTTCG
TTGTTGTCAACGTGTCGGTCGATTGGTCCTTCTGTATTTTTCCAACCGAA
CTCCCGCCCCGCACACCCGGACCGAACCGCCACTTAATCCTCGCTCTCTC
TCTTTGGCGCGCGTGGGGCTCGTGCATTGTATTCGCCACAACTAACGAAC
GGATGTGTTTTTTTTTATCGTCACGCACAGGAGAAGAAGTCGTTCGGGCT
GTTTCTCAAGGAGGAGAAGGTGGTGTGGGAGCAGTGGGTGGTGCCCGTGC
TGGTGAACACCTCGCCGCGTCCCACGGAAGCCGACGATACTTCAGGTGCG
ATGGGGAGAAAGGAAACAACTTCGTATTGTACCACTTTTTGTTCCTGTCA
TAACTTGTTTCCAAGTCCACCGGTCTTGTTTTTTCCATCCGTTTTTCTGT
ATGACTCCAGCACATTCCCTTCGGCTACTGTGGGTGTATCTCGAAGGGGT
AGTCTGTCCCTGTTTTTACCTATATTTTCTAAAAGAGACCAAGTAAATAG
GGGAAGTCGCTACTTTATTTTGCCTCGTAGCAGCTTGTTTCCAACTCCAC
CGATATCGTTTACAGGCACGATCGGTGGAGTTGGAAAACAAGCTACGAGA
GACTAAACACCAACCTCCAACCCACTCAACAGAAGTATCTAAGCGAGAAG
ATCAAACGAAAGATTGATTGAAAAGATTAATGATCGGTGGACTTGGGAAC
AAGTCACGAGAGACTTTTGCAGCAACCTCCTCCCCTCTCACTAGAACTAT
CTACACGATAAGACCAAATGAAAGATGGAGATGGATGGACCATCTATTTT
CCATTTTCTCCTTTCGTTTAGATACTATGATCTGGTGAGACAGGACGAGA
TTGGTGTTCAGGGTCTGGTAACTTTTTTTTTTTTTCCATTCTTTACTTAT
CCCCTAAAAACCCGAGACTTAATTAATTTAGTTAAGAAACACACCCTATG
TTTGTGGTGAAAAGGGTAGGAGGTTGCTGTTTAGTCTATCATACCTTGGT
TTCCAAGTCCACCGATCATTTTTCCCCATCCGTTTTCGTTTTTCCTTGCG
CTTGGAACCCAATTTGAGAATGCAGTACGTGTCGGCTTGTGTTGTGCTTG
TCAACTTCGATCTACATGTTGGTACTACTGCTGTTAACGTTCCCCTTCAA
TTTCTGTTTTGTCGGCGCACGTACCTTCCTTCCTGATCGTCGACGTGTCT
ATTTAGCTGCTTACGTTTGTCTTGTCCTCGTCTTGTTTGCGCCCCCCTTG
ATCCGGTGAGAACCCGGCGTGCTTCGTCCCAGTTTTGTAGGGATGCGAGA
TCAACGGTCTAACGACTACGGCATCACGATCATGAGTACCCCCCCCCCCC
CTAAACCATTCACAACCCCCCCCCCCCCCGGTGCCGCCGCCGCGCTGTCT
GTCCTACCTTCAGTGCTAGCGCGGGGCCGGCTCCAGGAGATGGCCGTCAG
GCTGGTGCAGGGGCGCATGTTAGACATCTTGACTAGCGTCAACGATTGCA
TAGACCACGTGCCGCCGGTGGGCACGGAGTACGAGTTCGAGGTGCGTTTG
TCTTTTTGTGTATTTTTCTCAGCCGTCGTCGCCATTTTTGTCTGCCCC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig88:330198..334295-

>mRNA_E-siliculosus-1a_M_contig88.16822.1 ID=mRNA_E-siliculosus-1a_M_contig88.16822.1|Name=mRNA_E-siliculosus-1a_M_contig88.16822.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1266bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig88:330198..334295- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGAGAACGGGCCGAGCCGACCCACACCAACAGCACACGGAAAGAGAGAT
GAACTTGAAGGAGCACGTTCTGGAAGAGCTGATGAGAACGGGCCGAGCCG
ACCCACACCAACAGCACACGGAAAGAGAGATGAACTTGAAGGAGCACGTT
CTGGAAGAGCTGGAGCTCCACGAGTACTATGTGCGGGACGCTCTGCAGTG
CCTGCTGCACACGATACTCTTTGTTCGGGCACCCGGGTCTCTCCGCCCCA
GAGAGGAGCTCCACGAGTACTATGTGCGGGACGCTCTGCAGTGCCTGCTG
CACACGATACTCTTTGTTCGGGCACCCGGGTCTCTCCGCCCCAGAGAGTC
ACACTGCGAGAACTTCGGGCTGTCCTTCGCTAGGTGCGGGGCTCGCGACG
TCGACGTAGCGTCACACTGCGAGAACTTCGGGCTGTCCTTCGCTAGGTGC
GGGGCTCGCGACGTCGACGTAGCGGTGGACGGAGCGCTGGAAGATTTTTG
GCGTAGTCTTAGGCCAGCAGGACCCGACCTCTCCAAAGGGTGGATCGCAG
TGAGCTTCTTCATGCGAAGAGTGGACGGAGCGCTGGAAGATTTTTGGCGT
AGTCTTAGGCCAGCAGGACCCGACCTCTCCAAAGGGTGGATCGCAGTGAG
CTTCTTCATGCGAAGAGAGAAGAAGTCGTTCGGGCTGTTTCTCAAGGAGG
AGAAGGTGGTGTGGGAGCAGTGGGTGGTGCCCGTGCTGGTGAACACCTCG
CCGCGTCCCACGGAAGCCGACGATACTTCAGGAGAAGAAGTCGTTCGGGC
TGTTTCTCAAGGAGGAGAAGGTGGTGTGGGAGCAGTGGGTGGTGCCCGTG
CTGGTGAACACCTCGCCGCGTCCCACGGAAGCCGACGATACTTCAGTGCT
AGCGCGGGGCCGGCTCCAGGAGATGGCCGTCAGGCTGGTGCAGGGGCGCA
TGTTAGACATCTTGACTAGCGTCAACGATTGCATAGACCACGTGCCGCCG
GTGGGCACGGAGTACGAGTTCGAGGTGCGTTTGTCTTTTTGTGTATTTTT
CTCAGCCGTCGTCGCCATTTTTGTCTGCCCCTGCTAGCGCGGGGCCGGCT
CCAGGAGATGGCCGTCAGGCTGGTGCAGGGGCGCATGTTAGACATCTTGA
CTAGCGTCAACGATTGCATAGACCACGTGCCGCCGGTGGGCACGGAGTAC
GAGTTCGAGGTGCGTTTGTCTTTTTGTGTATTTTTCTCAGCCGTCGTCGC
CATTTTTGTCTGCCCC
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