mRNA_E-siliculosus-1a_M_contig88.16807.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig88.16807.1 vs. uniprot
Match: D7G269_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G269_ECTSI) HSP 1 Score: 568 bits (1464), Expect = 1.500e-203 Identity = 291/320 (90.94%), Postives = 296/320 (92.50%), Query Frame = 1
Query: 1 MWPDFRLALEKFKGKILETVDTAEGTPSGALARTSREDTIKAITQLKVKTSSSQLATPADWVASLPGTWGSEVLKTLEANVDFAGAGEKSVLSLKQPPRRLAARVYCNGWNAWVHHDCAQFVQGLRTTSMGDTYKSFDKQDEDNSWLSGARLPRTSADTFVEKQLRASLIEQGATTDVAHPVHVRMSTSGCLQSASRVDGRNRRRAARLALEDERPPRTTTDGEHHYHRLPVLIVRKRKPAEALEEAHSSPLRTLARRVDQVEDMPTGSFFLELATITDSWEGMPWAQNVVPKIRKKATVVKDKMAAAQGDTLSESLGGL 960
MW DFRLAL +F GK+LETVDTAEGTPSGALARTSREDTIKAITQLKVK SSSQ ATPADW ASLPGT GSEVLKTLEANVDFAGAGEKSVLSLKQP RRLAARV+CNGWNAWVHHDCAQFVQGLRTTSMGDTYKSFDKQDEDNSWLS ARLPRTSADTFV+KQLRASLI QGATTDVAHPVHVR STSGCLQS SRVD NRRRAARLALEDER RTTTDGEHHYHRLPVLIVRKRKPAEALEEAHS LR LARRVDQV+ MP SFFLELATITDSWE MPWAQNVVPKIRKKATVVKDKMAAAQGD LSESLGGL
Sbjct: 1 MWSDFRLALGEFNGKLLETVDTAEGTPSGALARTSREDTIKAITQLKVKVSSSQFATPADWAASLPGTLGSEVLKTLEANVDFAGAGEKSVLSLKQPTRRLAARVFCNGWNAWVHHDCAQFVQGLRTTSMGDTYKSFDKQDEDNSWLSRARLPRTSADTFVDKQLRASLIGQGATTDVAHPVHVRKSTSGCLQSVSRVDVSNRRRAARLALEDERAARTTTDGEHHYHRLPVLIVRKRKPAEALEEAHSFILRVLARRVDQVDGMPASSFFLELATITDSWERMPWAQNVVPKIRKKATVVKDKMAAAQGDILSESLGGL 320 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig88.16807.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig88.16807.1 >prot_E-siliculosus-1a_M_contig88.16807.1 ID=prot_E-siliculosus-1a_M_contig88.16807.1|Name=mRNA_E-siliculosus-1a_M_contig88.16807.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=320bp MWPDFRLALEKFKGKILETVDTAEGTPSGALARTSREDTIKAITQLKVKTback to top mRNA from alignment at E-siliculosus-1a_M_contig88:215204..224771+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig88.16807.1 ID=mRNA_E-siliculosus-1a_M_contig88.16807.1|Name=mRNA_E-siliculosus-1a_M_contig88.16807.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=9568bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig88:215204..224771+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig88:215204..224771+ >mRNA_E-siliculosus-1a_M_contig88.16807.1 ID=mRNA_E-siliculosus-1a_M_contig88.16807.1|Name=mRNA_E-siliculosus-1a_M_contig88.16807.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1920bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig88:215204..224771+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |