mRNA_E-siliculosus-1a_M_contig87.16770.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig87.16770.1 vs. uniprot
Match: D7FW13_ECTSI (YHS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW13_ECTSI) HSP 1 Score: 513 bits (1322), Expect = 2.130e-176 Identity = 247/261 (94.64%), Postives = 253/261 (96.93%), Query Frame = 1
Query: 1 MATTEEDRPLVQRLHSPGAADASPGAGRALKPLLFSLKGFLTTFFAVLLLFLLAAMASRVIKWASNDSLTAERVESSLDGTKGTRLSGLVNPNNGSHPTLTTTADCTGDTHLPVLGGVDVVAYWALSAGSKPVFGTPNLVSLFGDYRFYFSSIENLRTFESDPVKYIPAWGGFCSYGVAAETFWRPDILGPFGDPAKWLILPGDGRLHVFRSERPMTKFLLAPGENLEAGDAIWNGWFPAERGGPAPLNTACLCSEEMCVN 783
MATTEEDRPL+QRL SPGAADASPGAGRALKPL FSLKGFLTTFFAVL LFLLAAMASRVIKWAS+DSLTAERVE SLDG +GTRLSGLVNPNNGSHPTLTTTADCTGDTHLPVLGGVDVVAYW L AGSKPVFGTPNLVSLFGDYRFYFSSIENLRTFESDPV+YIPAWGGFCSYGVAAETFWRPDILGPFGDP+KWLILPGDG+LHVFRSERPMTKFLLAPGENLEAGDAIWNGWFPAERGG APLNTACLCSEEMCVN
Sbjct: 1 MATTEEDRPLMQRLRSPGAADASPGAGRALKPLPFSLKGFLTTFFAVLFLFLLAAMASRVIKWASDDSLTAERVEYSLDGAEGTRLSGLVNPNNGSHPTLTTTADCTGDTHLPVLGGVDVVAYWTLPAGSKPVFGTPNLVSLFGDYRFYFSSIENLRTFESDPVRYIPAWGGFCSYGVAAETFWRPDILGPFGDPSKWLILPGDGKLHVFRSERPMTKFLLAPGENLEAGDAIWNGWFPAERGGAAPLNTACLCSEEMCVN 261
BLAST of mRNA_E-siliculosus-1a_M_contig87.16770.1 vs. uniprot
Match: A0A6H5JXZ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ9_9PHAE) HSP 1 Score: 157 bits (397), Expect = 9.010e-40 Identity = 79/169 (46.75%), Postives = 101/169 (59.76%), Query Frame = 1
Query: 292 PTLTTTADCTGDTHLPVLGGVDVVAYWALSAGSKPVFGTPNLVSLFGD-YRFYFSSIENLRTFESDPVKYIPAWGGFCSYGVAAETFWRPDILGPFGDPAKWLILPGDGRLHVFRSERPMTKFLLAPGENLEAGDAIWNGWF---PAERGGP-APLNTACLCSEEMCVN 783
P TTA+CTGDT P + G D+VAY +L G+ V G +G Y F FS++EN FESDP KY+PAWGGFCS+G++ E W PD+LGP +P WLI D RL++FRSE P KF ++ G+ +W WF P+ G P NTAC CSEE C +
Sbjct: 96 PAHVTTAECTGDTSKPAVKGFDLVAYRSLQPGTHGVRGLWEFSVQYGQGYTFLFSTLENQLEFESDPEKYLPAWGGFCSFGISHEDIWGPDVLGPPSNPDIWLI--EDDRLYLFRSETPYDKFKDDKARYIKHGNQVWTEWFGGNPSNEGTVMTPFNTACFCSEESCAD 262
BLAST of mRNA_E-siliculosus-1a_M_contig87.16770.1 vs. uniprot
Match: D7FW15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW15_ECTSI) HSP 1 Score: 156 bits (395), Expect = 1.700e-39 Identity = 94/245 (38.37%), Postives = 125/245 (51.02%), Query Frame = 1
Query: 106 SLKGFLTTFFAVLLLFLLAAMASRVI--------------KWASNDSLTAERVESSLDGTKGTRLSGLVNPNNGSHPTLTTTADCTGDTHLPVLGGVDVVAYWALSAGSKPVFGTPNLVSLFGD-YRFYFSSIENLRTFESDPVKYIPAWGGFCSYGVAAETFWRPDILGPFGDPAKWLILPGDGRLHVFRSERPMTKFLLAPGENLEAGDAIWNGWF---PAERGGP-APLNTACLCSEEMCVN 783
SL+G +T LLF+ A ++R K D + E LD GT L+ P TTA+CTGDT P + G D+VAY +L G+ V G +G Y F FS++EN FESDP +Y+PAWGGFC +G++ E W PD+LGP +P WLI D RL++FRSE P KF+ ++ G+ +W WF P+ G P NTAC CSEE C +
Sbjct: 30 SLRGGVTVLVGATLLFVAALASARAFPRGVKGRASPPSPYKGLDVDESSVEGAGLRLDEIDGTTLA----------PVHVTTAECTGDTSKPAVEGFDLVAYRSLQPGTHGVRGLWEFSVQYGQGYTFLFSTLENKLEFESDPERYLPAWGGFCGFGISHEVVWGPDVLGPPSNPDFWLI--EDDRLYLFRSETPYGKFMDNKARCIKHGNQMWTEWFAGNPSNEGTVMTPFNTACFCSEETCAD 262
BLAST of mRNA_E-siliculosus-1a_M_contig87.16770.1 vs. uniprot
Match: A0A6H5KGH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGH5_9PHAE) HSP 1 Score: 148 bits (374), Expect = 1.320e-37 Identity = 74/158 (46.84%), Postives = 97/158 (61.39%), Query Frame = 1
Query: 310 ADCTGDTHLPVLGGVDVVAYWALSAGSKPVFGTPNLVSLFGDYRFYFSSIENLRTFESDPVKYIPAWGGFCSYGVAAETFWRPDILGPFGDPAKWLILPGDGRLHVFRSERPMTKFLLAPGENLEAGDAIWNGWFPAERGGPA--PLNTACLCSEEMC 777
A+C G LPVLGGVDVV YW+L ++ V G+PNL+S+FG+YRF+FSS+ENLR FE+ A G +A E W LGPFG+P+KW I GRLH+FRS P +F NL+ G+A+W WF A P+NTAC C++ +C
Sbjct: 26 AECAGQFDLPVLGGVDVVEYWSLPLAAEAVLGSPNLMSVFGNYRFFFSSVENLRVFEARGFSLRSA-GEKIWQRIANEPVWTSTTLGPFGNPSKWGIY--GGRLHIFRSSMPKEEFEQDIPGNLDRGNAVWERWFGGMEESLAVPPINTACFCNDRIC 180
BLAST of mRNA_E-siliculosus-1a_M_contig87.16770.1 vs. uniprot
Match: D7G5N6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5N6_ECTSI) HSP 1 Score: 142 bits (358), Expect = 8.880e-35 Identity = 70/166 (42.17%), Postives = 96/166 (57.83%), Query Frame = 1
Query: 301 TTTADCTGDTHLPVLGGVDVVAYWALSAGSKPVFGTPNLVSLFGDYRFYFSSIENLRTFESDPVKYIPAWGGFCSYGVAAETFWRPDILGPFGDPAKWLILPGDGRLHVFRSERPMTKFLLAPGENLEAGDAIWNGWF-----PAERGGPAPLNTACLCSEEMCVN 783
TTT +C G + PVL G DVV+Y++L G ++G + Y F F+S +N FE+ P+ YIPAWGGFC+YG+AAE +W LGP DP WLI D L +FRSE P F+ N+ G+ IW GW+ P + +NTACLC+ E+C++
Sbjct: 70 TTTWEC-GTSTEPVLNGADVVSYFSLKEGEAAMYGFEEYPVKYNGYTFLFASAQNKALFEASPLDYIPAWGGFCAYGIAAEDWWTVSTLGPPSDPNSWLITD-DNVLRIFRSEVPKAYFMEDIPGNIATGNRIWTGWWGEGTLPGADDTGSAMNTACLCNIEICLD 233
BLAST of mRNA_E-siliculosus-1a_M_contig87.16770.1 vs. uniprot
Match: D7FW14_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW14_ECTSI) HSP 1 Score: 117 bits (292), Expect = 3.020e-27 Identity = 52/108 (48.15%), Postives = 68/108 (62.96%), Query Frame = 1
Query: 460 ENLRTFESDPVKYIPAWGGFCSYGVAAETFWRPDILGPFGDPAKWLILPGDGRLHVFRSERPMTKFLLAPGENLEAGDAIWNGWFPA--ERGGPAPLNTACLCSEEMC 777
LR + D +KY+PAWGGFCSYG+A E+ W LGPFG+P+KW I GRLH+FRS P +F NL+ G+A+W GWF E P+NTAC C++ +C
Sbjct: 13 RTLRFSQHDKLKYVPAWGGFCSYGIANESVWTSTTLGPFGNPSKWGIY--GGRLHIFRSSTPKEEFEEDIPGNLDRGNAVWEGWFGGMEESLMVPPINTACFCNDHIC 118
BLAST of mRNA_E-siliculosus-1a_M_contig87.16770.1 vs. uniprot
Match: A0A7S3UVA0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVA0_HETAK) HSP 1 Score: 116 bits (290), Expect = 4.320e-26 Identity = 60/141 (42.55%), Postives = 75/141 (53.19%), Query Frame = 1
Query: 337 PVLGGVDVVAYWALSAGSKPVFGTPNLVSLFGDYRFYFSSIENLRTFESDPVKYIPAWGGFCSYGVAAETFWRPDILGPFGDPAKWLILPGDGRLHVFRSERPMTKFLLAPGENLEAGDAIWNGWFPAERGGPAPLNTACL 759
PVL G DVVAY+ L V G+ S++ + FYFSS EN+ FESDP KY+PAWGGFC+YGVA ET+W + + P W I+ DGRL F F + + GDA W+GW G NT C
Sbjct: 15 PVLEGYDVVAYFGLDPLDDGVQGSSEFTSVYQGFEFYFSSKENMEKFESDPEKYVPAWGGFCAYGVAEETWWTAETMSAGVVPDAWRII--DGRLFFFHDIGVAAWFAALLPDAIREGDATWHGW------GLEGYNTNCF 147
BLAST of mRNA_E-siliculosus-1a_M_contig87.16770.1 vs. uniprot
Match: A0A7S3JR48_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JR48_9STRA) HSP 1 Score: 114 bits (284), Expect = 4.000e-24 Identity = 63/161 (39.13%), Postives = 84/161 (52.17%), Query Frame = 1
Query: 310 ADCTGDTHLPVLGGVDVVAYWALSAGSKPVFGTPNLVSLFGDYRFYFSSIENLRTFESDPVKYIPAWGGFCSYGVAAETFWRPDILGPFGDPAKWLILPGDGRLHVFRSERPMTKFLLAP-GENLEAGDAIWNGWFPAERGGPAPLNTACL--CSEEMCVN 783
+ C + PVL G DVVAY L+ G+ G+ + + +G+Y FYF + EN TF S+P KY+P +GGFCSYG+ E FW D LGP + W+I D L VF P KF+ E +E G+ IW+ W+ NT C EE VN
Sbjct: 137 SSCVDPSAGPVLEGADVVAYRYLNVGANATIGSADYAAKYGEYTFYFENAENRATFLSNPDKYVPKFGGFCSYGITNEFFWTKDTLGPNANKNVWIIY--DDHLFVFMYCTPEHKFVSRNITEEIERGNQIWSTWW----NDVPTFNTGCFWHSREEGGVN 291
BLAST of mRNA_E-siliculosus-1a_M_contig87.16770.1 vs. uniprot
Match: A0A7S3UXT1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXT1_HETAK) HSP 1 Score: 108 bits (270), Expect = 2.780e-22 Identity = 57/139 (41.01%), Postives = 75/139 (53.96%), Query Frame = 1
Query: 301 TTTADCTGDTHLPVLGGVDVVAYWALSAGSKPVFGTPNLVSLFGDYRFYFSSIENLRTFESDPVKYIPAWGGFCSYGVAAETFWRPDIL--GPFGDPAKWLILPGDGRLHVFRSERPMTKFLLAPGENLEAGDAIWNGW 711
T T DC PV G DVVAY+ L S V G+P S++ Y FYFS+ EN FES P Y+PAWGGFCSYGV+ E++W + + G + A W ++ DGRL +F F + + GDA+W W
Sbjct: 81 TITNDCMDAELGPVASGYDVVAYFDLDPLSDGVLGSPEFTSIYKGYTFYFSTRENQDRFESSPETYVPAWGGFCSYGVSQESWWTAETMRAGVYASGA-WRVV--DGRLFLFHDPDVAALFAGLLPDAVRQGDAVWGAW 216
BLAST of mRNA_E-siliculosus-1a_M_contig87.16770.1 vs. uniprot
Match: A0A7S2V1S8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1S8_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 2.030e-15 Identity = 44/100 (44.00%), Postives = 60/100 (60.00%), Query Frame = 1
Query: 337 PVLGGVDVVAYWALSAGSKPVFGTPNLVSLFGDYRFYFSSIENLRTFESDPVKYIPAWGGFCSYGVAAETFWRPDILGPFGDPAKWLILPGDGRLHVFRS 636
PVL G DVV+Y+ + P+ G+ +L+ Y F F S EN+ F + P Y+P +GGFC+YGVA ET+W L +P +LIL +G LHVFRS
Sbjct: 38 PVLQGYDVVSYYQDNK-MGPMKGSTKHQALYEGYTFLFHSPENMEVFLAKPEAYVPEFGGFCTYGVAEETYWTASTLAAPANPLVYLIL--EGHLHVFRS 134 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig87.16770.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig87.16770.1 >prot_E-siliculosus-1a_M_contig87.16770.1 ID=prot_E-siliculosus-1a_M_contig87.16770.1|Name=mRNA_E-siliculosus-1a_M_contig87.16770.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=263bp MATTEEDRPLVQRLHSPGAADASPGAGRALKPLLFSLKGFLTTFFAVLLLback to top mRNA from alignment at E-siliculosus-1a_M_contig87:598391..604257- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig87.16770.1 ID=mRNA_E-siliculosus-1a_M_contig87.16770.1|Name=mRNA_E-siliculosus-1a_M_contig87.16770.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5867bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig87:598391..604257- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig87:598391..604257- >mRNA_E-siliculosus-1a_M_contig87.16770.1 ID=mRNA_E-siliculosus-1a_M_contig87.16770.1|Name=mRNA_E-siliculosus-1a_M_contig87.16770.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1578bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig87:598391..604257- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |