mRNA_E-siliculosus-1a_M_contig87.16756.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig87.16756.1 vs. uniprot
Match: D7FW26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW26_ECTSI) HSP 1 Score: 879 bits (2271), Expect = 0.000e+0 Identity = 452/471 (95.97%), Postives = 458/471 (97.24%), Query Frame = 1
Query: 34 MDAIVTALTTSVLGTVRLFVVLLAGFLASKFPRNEPLLTKDTCRCISRVCALLFWPALMTAGTGATLTPGTLQDAWQLVVTGSFTIGFSGVVAWLVGRVSFRRPEDRRAFRPAALAIAFPNSAGFPLLLVDALCEQDYINSDFDDDEVECFTQATGMIFIYVVVWQVWFYSWGFYALGQDDELERKLAGEATKSPSEATTDDVEISSPCEMVQGDAFPPRQAEGGSGRQSPIRDGAVVVGASLRNEGVSGTGETRAASHAGKDGGDEGCCSWAGLRRRLWRVVVSPNMIAVAIGVTIAMIPALQELLFDNPRAVLRPLGAAIETIGSPTVAVSTLVMAGSLVQVPTVGAASAAATQGVQGDDDGTLRRWRRFRILVGFLHVVCRLIVVPAVGFTLFWVARNQSSVMGENRLMHLVLLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 1446
MDAIVTALTTSVLGTVRLFVVLLAGFLASKFPRNEPLL KDTCRCISRVCALLFWPALMTAGTGATLTPGTLQDAWQLVVTGSFTIGFSGVVAWLVGRVSFRRPEDRRAFRPAALAIAFPNSAGFPLLLVDALCEQDYINSDFDDDEVECFTQATGMIFIYVVVWQVWFYSWGFYALGQDDELERKLAGEA KSPSEATTDDVEISSPCE+ QGDA PPRQAEGGSGRQSP DGAVVVGAS RNEGVSGT T AASHAGKDG DEGCCSWAGLRRRLWR+VVSPNMIAVAIGVTIAMIPALQE LFDNPRAVLRPLGAA+ETIGSPTVAVSTLVMAGSLVQVPTVGAASAAA+QG QGDDDGTLRRWRRFRILVGFLHVVCRLIVVPAVGFTLFWVARNQSSVMGENRLMHL+LLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASM+TITAWTALAVHLVY
Sbjct: 1 MDAIVTALTTSVLGTVRLFVVLLAGFLASKFPRNEPLLAKDTCRCISRVCALLFWPALMTAGTGATLTPGTLQDAWQLVVTGSFTIGFSGVVAWLVGRVSFRRPEDRRAFRPAALAIAFPNSAGFPLLLVDALCEQDYINSDFDDDEVECFTQATGMIFIYVVVWQVWFYSWGFYALGQDDELERKLAGEAAKSPSEATTDDVEISSPCEIAQGDALPPRQAEGGSGRQSPTHDGAVVVGASRRNEGVSGTSGTAAASHAGKDGDDEGCCSWAGLRRRLWRLVVSPNMIAVAIGVTIAMIPALQEQLFDNPRAVLRPLGAAVETIGSPTVAVSTLVMAGSLVQVPTVGAASAAASQGGQGDDDGTLRRWRRFRILVGFLHVVCRLIVVPAVGFTLFWVARNQSSVMGENRLMHLILLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMVTITAWTALAVHLVY 471
BLAST of mRNA_E-siliculosus-1a_M_contig87.16756.1 vs. uniprot
Match: A0A6H5J918_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J918_9PHAE) HSP 1 Score: 692 bits (1786), Expect = 1.630e-241 Identity = 415/680 (61.03%), Postives = 431/680 (63.38%), Query Frame = 1
Query: 34 MDAIVTALTTSVLGTVRLFVVLLAGFLASKFPRNEPLLTKDTCRCISRVCALLFWPALMTAGTGATLTPGTLQDAWQLVVTGSFTIGFSGVVAWLVGRVSFRRPEDRRAFRPAALAIAFPNSAGFPLLLVDALCEQDYIN-------SDFDDDEVECFTQATGMIFI------------------------YVVVWQVWFYSWGFYALGQDDELERKLAGEATKSPSEATTDDVEISSPCEMVQGDAFPPRQAEGGSGRQSPIRDGAVVVGASLRNEGVSGTGETRAASHAGKDGGDEGCCSWAGLRRRLWRVVVSPNMIAVAIGVTIAMIPALQELLFDNPRAVLRPLGAAIE----------------TIGSPTVAVSTLVMAGSLVQVPTVGAASAAATQGVQGDDDGTLRRWRRFRILVGFLHVVCRLIV------------------------------------------------------------------------------------------------------------------------------------------------------------------VPAVGFTLFWVARNQSSVMGENRLMHLVLLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 1446
MDAI+TAL TSVLGTVRL VVLLAGFLASKFP PLLTKDTCRCISRVCALLFWPALMTAGTGATLTPGTLQDAWQLVVTGSFTIGFSGVVAWLVGRVSF+RPEDRRAFRPAALAIAFPNSAGFPLLLVDALCEQDYIN FD+ + + TG+ Y + QVWFYSWGFYALGQDDELERKLAGE K PSEATTDDVEISSPCE+ QGDA PP QA+GGSG QSPI DGAV+VGAS RNEGVSGTG T ASHAG+DG D GC SWAGLRRRLWR+ VSPNMIAVAIGV IAM+PALQELLFD+PRAVLRP GAAIE TIGSPTVAVSTLVMAGSLVQVPTVGA SAAATQGVQ DDDGTLRRWRRFRI+VGFLHVVCRLIV VPAVGFTLFWVARNQSSVMGENRLMHL+LLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY
Sbjct: 1 MDAILTALITSVLGTVRLSVVLLAGFLASKFP---PLLTKDTCRCISRVCALLFWPALMTAGTGATLTPGTLQDAWQLVVTGSFTIGFSGVVAWLVGRVSFQRPEDRRAFRPAALAIAFPNSAGFPLLLVDALCEQDYINRWPTQNTKLFDNVLLWRGVETTGLYIATCELAPRPAACSHTLRRQGFSFHGYGQILQVWFYSWGFYALGQDDELERKLAGEEAKIPSEATTDDVEISSPCEIAQGDALPPLQADGGSGMQSPIHDGAVIVGASRRNEGVSGTGGTAVASHAGEDGDDAGCFSWAGLRRRLWRLAVSPNMIAVAIGVIIAMLPALQELLFDSPRAVLRPFGAAIEVGHCSLAATPVAIEQGTIGSPTVAVSTLVMAGSLVQVPTVGAGSAAATQGVQCDDDGTLRRWRRFRIVVGFLHVVCRLIVGEHADPRAARFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRHRTVDEEDDEFKCDCGFECEDRVHVVAECPLYKKEREVYVTELGKIDGTYREMFEAWNREERTVAVVGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVPAVGFTLFWVARNQSSVMGENRLMHLILLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 677
BLAST of mRNA_E-siliculosus-1a_M_contig87.16756.1 vs. uniprot
Match: A0A6H5JAX8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAX8_9PHAE) HSP 1 Score: 594 bits (1532), Expect = 2.470e-206 Identity = 320/477 (67.09%), Postives = 372/477 (77.99%), Query Frame = 1
Query: 34 MDAIVTALTTSVLGTVRLFVVLLAGFLASKFPRNEPLLTKDTCRCISRVCALLFWPALMTAGTGATLTPGTLQDAWQLVVTGSFTIGFSGVVAWLVGRVSFRRPEDRRAFRPAALAIAFPNSAGFPLLLVDALCEQDYINSDFDDDEVECFTQATGMIFIYVVVWQVWFYSWGFYALGQDDELERKLAGEATKSPSEATTDDVEISSPCEMVQGDAFPPRQAEGGSGR----QSPIRDGAVVVGASLRNEGVSGTGETRAASHAGKDGGD--EGCCSWAGLRRRLWRVVVSPNMIAVAIGVTIAMIPALQELLFDNPRAVLRPLGAAIETIGSPTVAVSTLVMAGSLVQVPTVGAASAAATQGVQGDDDGTLRRWRRFRILVGFLHVVCRLIVVPAVGFTLFWVARNQSSVMGENRLMHLVLLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 1446
MDAI+TAL+TSVLGT+R+ +LLAGF AS++P++EPLL K+TCR SR CALLF P+LM + GATL P L+++WQLVV GSFT+ SG VAW+VGRV FRRPEDRRAFRPA LAI F NSAGFPLLL++ALCEQDY+ SD++DD +ECFTQATGMIFIYVVVWQ++F+ WGFYALG DD LER L G+ T++ + +T RQ GG GR ++ + D G +EG + G T +DGGD EG WAG + R+ RV+VSPN+I+V IGV IAMI LQE+LFDN R++LRPLGAA++T+G+P VAVSTLVMAGSL QVPTV AAS TQG QGDDDGTLRR RRFRI+ GFLHVVCRLIVVPA+GFTLFWVAR QSSVMGENRLMHL+LLIE AMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY
Sbjct: 1 MDAIITALSTSVLGTLRVLAILLAGFFASRWPKSEPLLAKETCRAFSRACALLFLPSLMISSLGATLNPEALKNSWQLVVAGSFTVALSGTVAWVVGRVFFRRPEDRRAFRPAGLAITFANSAGFPLLLMNALCEQDYVRSDYNDDALECFTQATGMIFIYVVVWQMYFFGWGFYALGHDDTLERSLTGQQTRTRTPSTKXXXXX-----XXTSSTSSARQEHGGVGRINAAEAVVIDIEPCTGEESSSEGTTNAGGT-------EDGGDVSEGG-PWAGFKERVSRVLVSPNIISVTIGVVIAMIAPLQEMLFDNSRSILRPLGAALQTVGTPEVAVSTLVMAGSLAQVPTVAAAS---TQGGQGDDDGTLRRKRRFRIIAGFLHVVCRLIVVPAIGFTLFWVARTQSSVMGENRLMHLILLIEFAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 461
BLAST of mRNA_E-siliculosus-1a_M_contig87.16756.1 vs. uniprot
Match: A0A6H5J8G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8G0_9PHAE) HSP 1 Score: 348 bits (894), Expect = 3.830e-108 Identity = 237/610 (38.85%), Postives = 302/610 (49.51%), Query Frame = 1
Query: 37 DAIVTALTTSVLGTVRLFVVLLAGFLASKFPRNEPLLTKDTCRCISRVCALLFWPALMTAGTGATLTPGTLQDAWQLVVTGSFTIGFSGVVAWLVGRVSFRRPEDRRAFRPAALAIAFPNSAGFPLLLVDALCEQDYINSDFDDDEVECFTQATGMIFIYVVVWQVWFYSWGFYALGQDDELERKLAGEATKSPSEATTDDVEISSP------------CEMVQGDAF---------PPRQ------------------------------AEGG-----SGRQSPIRDGAV------VVGASLRN-EGVSGTGETRAASHAG----------------------KDGGDEGCCS-------------------------------------------------------WAGLRRRLWRVVVSPNMIAVAIGVTIAMIPALQELLFDNPRAVLRPLGAAIETIGSPTVAVSTLVMAGSLVQVPTVGAASAAATQGVQGDDDGTLRRWRRFRILVGFLHVVCRLIVVPAVGFTLFWVARNQSSVMGENRLMHLVLLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 1446
D T L TSVLGT R FVVL G++ S P+ EPL+ K+ R SRV LF P LM AG GA L PG L+D+W LVV+ + +IG S VAW G + RR + R FRP LAIAFPN+ PL+L DALCEQD INSDFD D ECF QATGMIFI++ VWQVWFY+WG Y D+ LE L + +P T + ISS C+ G+ PP AEGG SG P A VVGA+ + G +GTG S G + G GC W + R W ++VSP ++AV G+ I I LQ++LF NP+A+LRPLG AI+ +G PTV VS+LVMAGSLV V V +A G ++ + WRR R + GFL V RL+ +PA F +FWVA+ SSVMGENRLMHL+LL+E AMP+A +I L+Q+R+P TAGF++RL +WQY AS +T++ WTALA+ ++Y
Sbjct: 18 DTTTTVLLTSVLGTFRFFVVLGVGYIVSVRPQREPLMPKEVGRHFSRVAMDLFLPCLMLAGMGANLNPGALRDSWHLVVSSTLSIGLSNGVAWAFGWLLMRR-DARAKFRPVQLAIAFPNALVVPLVLFDALCEQDLINSDFDGDNNECFDQATGMIFIFLAVWQVWFYAWGVYCFQNDNALELALTSQPAAAPLPTTVRETAISSGGTGPPHAPDPPRCQSGHGNGSITKVSSSTSPPSSVTLRNSSPKHTLHLIPAEAAKVDGDRASEWAEGGAVGGDSGAVDPQAGAAAAGDETGVVGAATESGTGATGTGAKSHGSPVGSLHSREVGVESTPLGRDQPTLMEQTGRGGCGDADASEVASMPRRRKENKAVADLLVIEEGNVIDGGGARGSGTGDVNGGRGSDSEGPWEEAKHRAWALLVSPVIVAVVAGIVICTIEPLQDMLFHNPQALLRPLGGAIQAVGVPTVTVSSLVMAGSLVAVSAVADEAAPPA----GGNEVAVPIWRRPRFVTGFLLVFLRLVAIPAAFFGIFWVAKTYSSVMGENRLMHLILLVEFAMPTATIMIPLLHQIRLPRTAGFISRLLVWQYAASSITVSFWTALAITMLY 622
BLAST of mRNA_E-siliculosus-1a_M_contig87.16756.1 vs. uniprot
Match: D7FW24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW24_ECTSI) HSP 1 Score: 166 bits (421), Expect = 8.800e-45 Identity = 88/166 (53.01%), Postives = 119/166 (71.69%), Query Frame = 1
Query: 949 LLFDNPRAVLRPLGAAIETIGSPTVAVSTLVMAGSLVQVPTVGAASAAATQGVQGDDDGTLRRWRRFRILVGFLHVVCRLIVVPAVGFTLFWVARNQSSVMGENRLMHLVLLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 1446
+LF NP+A+LRPLG AI+ +G PTV VS+LVMAGSLV V V +A + G + + WRR R ++GFL V RLI +PA F +FW A+ SSVMGENRLMHL+LL+E AMP+A +I L+Q+R+P TAGF++RL +WQY AS +T++ WTA A+ ++Y
Sbjct: 1 MLFHNPQALLRPLGGAIQAVGVPTVTVSSLVMAGSLVAVSAVANGAAPSA----GGHEAAVPIWRRPRFVMGFLLVFLRLIAIPAAFFGVFWGAKTYSSVMGENRLMHLILLVEFAMPTATIMIPLLHQIRLPRTAGFISRLLVWQYAASSITVSFWTAFAITMLY 162
BLAST of mRNA_E-siliculosus-1a_M_contig87.16756.1 vs. uniprot
Match: A0A835Z6D5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6D5_9STRA) HSP 1 Score: 177 bits (449), Expect = 1.410e-44 Identity = 158/557 (28.37%), Postives = 235/557 (42.19%), Query Frame = 1
Query: 169 ISRVCALLFWPALMTAGTGATLTPGTLQDAWQLVVTGSFTIGFSGVVAWLVGRVSFRRPEDRRAFRPAALAIAFPNSAGFPLLLVDALCEQDYINSDFDDDEVECFTQATGMIFIYVVVWQVWFYSWGFYALGQDDELERK--------------LAGEATKSPSEA---------------------------------------TTDDVEISSPCEMVQGDAFPPRQAEGGSGRQSPIRDGAVVVGASLRNEGVSGTGETRAASHAGKDGG----DEGCCSWAGLRRRLWRVVVSPNMIAVAIGVTIAMIPALQELLFDNPRAVLRPLGAAIETIGSPTVAVSTLVMA------------GSLVQV-------PTVGAAS------------------------------------------------------AAATQGVQGDDDGTLRRWRRFRILVGFLHVVCRLIVVPAVGFTLFWVARNQSSVM-GENRLMHLVLLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 1446
+ R+C LF P L+ A GA L+ L + L+V + S VV ++ P + R F+ +A+ F N PLL +++LC+QD +N+D+D ECF AT MIF+Y++ W +WFYSWGFY L + D+L+ K + G+ + S A T +S C+ G R + S R G+ G + + + AA+ + G E W G +WR VVSP +AV +GVTI ++PAL+E +F + + LRP+GAAI TIG PT+A+ TL+MA G+ + + GAA AAA R RR +L + V+ L+VVPAVGF F + + ++ + G L+ L++L++L MP A VIV L+ L +P A +ARLYL+QY AS+ T+TA A+A+ VY
Sbjct: 1 MGRLCNWLFLPGLVCASMGANLSTSLLLEYSPLLVADTVIRAISWVVITACEKLL---PVEPRLFKAVKIAVLFCNVGSIPLLYMESLCDQDIVNADYDGSASECFAAATSMIFVYLITWHIWFYSWGFYELAKADDLDEKPTALPPVDNFLGVSITGDFDRPHSMAVSVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAGGARTFKLSAAASECDSTTGARAAARAPDALLPPLSHSRCGSAASGPAADKAARAPAFASAAANPDVRANGLAPLPEKQRWWLGGAGGVWRAVVSPPNVAVLLGVTIGVVPALREGMFHDATSPLRPIGAAIVTIGQPTIALQTLLMAARSSSTSPSSDHGTCISTCDRAARSSSSGAAPLSLHSCWVRRESCHQAPYWRRMTFKCTHSHCAPSLPPHSPPPRSLAHSHGRLQLAAAXXXXXXXXXXAQRSLRRSEVLTAAVFVLVPLVVVPAVGFAAFVLLHDNTAFLRGAPPLLQLLILLQLGMPGAQAVIVGLSHLALPRMAAALARLYLYQYVASIATLTALAAVAMMYVY 554
BLAST of mRNA_E-siliculosus-1a_M_contig87.16756.1 vs. uniprot
Match: A0A836C7K1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7K1_9STRA) HSP 1 Score: 159 bits (403), Expect = 5.780e-38 Identity = 164/617 (26.58%), Postives = 249/617 (40.36%), Query Frame = 1
Query: 64 SVLGTVRLFVVLLAGFLASKFPRNEPLLTKDTCRCISRVCALLFWPALMTAGTGATLTPGTLQDAWQLVVTGSFTIGFSGVVAWLVGRVSFRRPEDRRAFRPAALAIAFPNSAGFPLLLVDALCEQDYINSDFDDDEVECFTQATGMIFIYVVVWQVWFYSWGFYALGQDDELERK----LAGEAT--------------------KSPSEATTDDVE-ISSPCEMVQGDA-------------FPPRQAEGGSGRQSPIRDGAVVVGASLRNEG---------------------------------------VSGTGETRAAS--------------HAGKDGGDEGCCSWAGLR-------------------------------RRLWRVVVSPNMIAVAIGVTIAMIPALQELLFDNPRAVLRPLGAAIETIGSPTVAVSTLVMAGSLVQVPTVGAASAAATQGVQGDDDGTLR-----RWRRFRILVGFLHVVCRLIVVPAVGFTLFWVARNQSSVMGE-NRLMHLVLLIELAM----------------------------PSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 1446
+VL ++ VV G + P+ PL + + R+C L+F PA++ + G LT L + L+ S S VA V R+ P + R ++ AI F N PLL +D+LC+Q IN++FD CF T MIF+Y++ W +WFYSWGF+ L + +EL+ +AG++T + S ATTD E + + ++ QG A P SGR + + + V + + G VS + A S H G G + A L +L R +P IAVA+GV I +IP L LF N R+ LRP+GAA+ T+G P VA++TL+MA SL Q A G + D L + RR +I + L V C L+VVP +GF +F N + ++ LM L+++ ++ PS VI+SL+Q+ +PA A +AR+Y++QY S++T+T AL + +Y
Sbjct: 11 AVLSMGKIIVVTSIGVFCATRPKGNPLFDAELLPRLGRLCNLVFLPAMVCSSMGGALTAAMLVEYLPLLFADSALRLLSWAVAAAVERLL---PVEPRLYKAVKFAILFTNVGTIPLLYLDSLCDQAVINAEFDGSASLCFESGTNMIFVYLITWHLWFYSWGFFKLAEANELDHPPPPAVAGKSTLQLEEGASLGIKPEDAILEARQESNATTDSSEPVGNTEDVTQGPASLNDVESTGVRRRLPRWLTRQQSGRDRALSEHSQKVAVIIASHGAKQLGCHPAIPVLPVAVLERDEHHHSSPLLASPRRSSDYVSDHNQNSAGSDSVHTPPITPAAHGHHGSHGHVRTPSALARLMPHHLPLVHLPHLSMHVHLHIPDVLPELPKLGAQLKRAASTPPNIAVALGVIIGLIPPLANGLFHNSRSPLRPIGAAMVTVGQPYVAIATLLMASSLAQSRKNAALPTPTVVGTEVMDAAQLHNAQQEQARREKITMLVL-VFCPLVVVPMLGFGIFAFLDNYTPILNSATPLMKLLIIFQVTTTSMLRLMVEIXXXXXXXXXXXXXXXXXXPSGLSVIISLSQMHLPAMASSLARMYMYQYLLSIITLTVLAALTMAYIY 623
BLAST of mRNA_E-siliculosus-1a_M_contig87.16756.1 vs. uniprot
Match: B8BS46_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BS46_THAPS) HSP 1 Score: 106 bits (265), Expect = 1.370e-20 Identity = 119/524 (22.71%), Postives = 220/524 (41.98%), Query Frame = 1
Query: 37 DAIVTALTTSVLGTVRLFVVLLAGFLASKFPRNEPLLTKDTCRCISRVCALLFWPALMTAGTGATLTPGTLQDAWQLVVTGSFTIGFSGVVAWLVGRVSFRRPEDRRAFRPAALAIAFPNSAGFPLLLVDALCEQDYINSDF--DDDEVE-----------CFTQATGMIFIYVVVWQVWFYSWGFYALGQDDELERKLAGEATKSPSEATTDDVEISSPCEMVQGDAFPPRQAEGGSGRQSPIRDGAVVVGASLRNEGVSGTGETRAASHAGKDGGDEGCCSWAGLRRRLWRVVVSPNMIAVAIGVTIAMIPALQELLFDNPRAVLRPLGAAIETIGSPTVAVSTLVMAGSLVQVPTVGAASAAATQGVQGDDDGT--------------------------------------------LRRWRRFRILVGFLHVVCRLIVVPAVGFTLFWVARNQSSVMGE-NRLMHLVLLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAV 1434
+AI + + S T ++FV+ G+ A+ P+L IS++ L L+ A +++TP + W ++V+ I S VA L+G++ F R E++ F +A AFPN P+L+ LCE ++ F + D+V C Q+ MIF+Y W ++ G+ L + +R++ E T S + + + S E V + E G + + + E TGE A + D+ + L++ + SP +A+ +G A IP L++ LF+ P LR G+A+E++GS + +V T+++A SLV ++ DD+ T +R+ R+ + + + RLIV PA+ +L + + ++ + L +V+++ +P A +++L + +A +A++YL Y S +TI AWT++ +
Sbjct: 3 NAITSVIIASTSATAKVFVIGGIGYWAAA--SKSPILPPHALTPISKMNFNLLILPLIYATLASSVTPEKIGSLWFVLVSAFGVISLSFGVATLLGKLPFFRVENKIDFDALRIAAAFPNIVALPILIFPTLCEFAVVHDSFYTEGDDVNEEATQVEKYRSCVDQSNAMIFVYFFAWNFLYWVLGYETLVRAGS-KRQIHNEETLSTETSVVHNTDDS--FEAVNHHQXXXLEQEENGGLEGRVTPKVI--------ENECTTGEEVAIPNE-----DKKTSVLRLIATALFKTISSPGFVAMILGFITACIPPLRDALFE-PGGALRFFGSAMESLGSASSSVGTIIVAASLVHQANDDNIRDGREDSIEHDDNATQTHQLHNECESSDTIQQTQSTRRRSSMSQFGGMVRRRSSLALQSIRKLRKPTLQMHAWFITSRLIVAPAI-VSLIIIGMDCGGILSDIPSLAKMVVIVNAGLPGAQLCVITLKSKGLTDSASIVAKVYLPSYLLSAVTIAAWTSIGL 506
BLAST of mRNA_E-siliculosus-1a_M_contig87.16756.1 vs. uniprot
Match: F0XVW1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVW1_AURAN) HSP 1 Score: 99.8 bits (247), Expect = 5.860e-18 Identity = 122/480 (25.42%), Postives = 195/480 (40.62%), Query Frame = 1
Query: 79 VRLFVVLLAGFLASKFPRN-EPLLTKDTCRCISRVCALLFWPALMTAGTGATLTPGTLQDAWQLVVTGSFTIGFSGVVAWLVGRVSFRRPEDRRA---FRPAALAIAFPNSAGFPLLLVDALCEQDYINSDFDDDEVECFTQATGMIFIYVVVWQVWFYSWGFYALGQDDELERKLAGEATKSPSEATTDDVEISSPCEMVQGDAFPPRQAEGGSGRQSPIRDGAVVVGASLRNEGVSGTGETRAASHAGKDGGDEGCCSWAGLRRRLWRVVVSPNMIAVAIGVTIAMIPALQELLFDNPRAVLRPLGAAIETIGSPTVAVSTLVMAGSL--VQVPTVGAASAAAT-----------------QGVQGDDDGTLRRWRRFR-ILVGFLHVVCRLIVVPAVGFTLFWVARNQSSVMGENRLMHLVLLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 1446
VRL +V G A+ P+ PLL + + +SR A+ P ++ G++++ L+ + LVV G TIG A L G V P + R +R AALA FPN PL++V +CE+D + DFDD + EC IF+ VW + F+++G L + R AG+A + P P R G +V + P A+ +G + M LQ+ LF + + LR LG IE + SP V ++ L+ S V+ ++G+ AA + L R R I+ GF+ V RL+ VPA T+ + + + + L+L + MPSA +I+ L++ M A ++ L+++QY AS+LT+T +L++ +VY
Sbjct: 591 VRLLLVASVGAYAATRPKGGPPLLPEAAIQQLSRFSAVCLIPCIIVDSIGSSVSVELLRQSVALVVYGLVTIGLGLGYARLWGAVVL--PAELRETSLWRVAALASGFPNIVAVPLVIVATVCERDEVRDDFDDRD-ECAKTGAAFIFMNSFVWSIVFFTFGVARLAAI-KARRGGAGDAPRPP-----------------------------------PPRGGPLV------------------------------------------KFFSEPVNAALVVGTAVGMARPLQKALFVSRTSPLRALGGTIELLASPVVCLAILITGASFANVEFDSIGSDDAAVAGPKEEAKALAAADPELVEAAPPAKKSALDALRGVRPIVAGFILV--RLVFVPA---TVVALETLLPRALPQKPIGRLILHVSSGMPSAQILIILLHKFGMSRAAADISFLFVFQYAASILTMTVLISLSLQVVY 984
BLAST of mRNA_E-siliculosus-1a_M_contig87.16756.1 vs. uniprot
Match: A0A7S4E2T5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E2T5_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 2.070e-15 Identity = 71/203 (34.98%), Postives = 111/203 (54.68%), Query Frame = 1
Query: 865 RLW--RVVVSPNMIAVAIGVTIAMIPALQELLF--DNPRAVLRPLGAAIETIGSPTVAVSTLVMAGSLVQVPTVGAASAAATQG-----VQGDDDGTLRRWRRFRILVGFLHVVCRLIVVPAVGFTLFWVARNQSSVMGENRLMHLVLLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 1446
+LW R+ + PNMI + GV I P L+ LLF D P LRP+G A+ET+G+P VAV+ ++MA +L G A T+ V+ + + R V F ++ RL++VP + + +F V + R+ L++L+ELAMP A V+V+LN + A +A Y QY +++T+TA+T A+H+VY
Sbjct: 194 KLWCKRLFLQPNMIGMYAGVIIGATP-LRRLLFRGDTP---LRPIGLALETLGAPVVAVTVMIMAAALAN----GHARRRRTKREFSSVVENNSHASKEDTRDVATAVWF--ILARLVIVPVIAYPIFSVIN-----LPGGRMTTLIILLELAMPGAQTVLVTLNAVGSGHVAEEIAPWYFLQYATAIVTLTAFTVWALHIVY 381 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig87.16756.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig87.16756.1 >prot_E-siliculosus-1a_M_contig87.16756.1 ID=prot_E-siliculosus-1a_M_contig87.16756.1|Name=mRNA_E-siliculosus-1a_M_contig87.16756.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=472bp MDAIVTALTTSVLGTVRLFVVLLAGFLASKFPRNEPLLTKDTCRCISRVCback to top mRNA from alignment at E-siliculosus-1a_M_contig87:494450..498945- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig87.16756.1 ID=mRNA_E-siliculosus-1a_M_contig87.16756.1|Name=mRNA_E-siliculosus-1a_M_contig87.16756.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=4496bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig87:494450..498945- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig87:494450..498945- >mRNA_E-siliculosus-1a_M_contig87.16756.1 ID=mRNA_E-siliculosus-1a_M_contig87.16756.1|Name=mRNA_E-siliculosus-1a_M_contig87.16756.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2832bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig87:494450..498945- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |