mRNA_E-siliculosus-1a_M_contig87.16747.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig87.16747.1
Unique NamemRNA_E-siliculosus-1a_M_contig87.16747.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig87.16747.1 vs. uniprot
Match: D7FW35_ECTSI (Aldehyde Dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW35_ECTSI)

HSP 1 Score: 959 bits (2480), Expect = 0.000e+0
Identity = 489/499 (98.00%), Postives = 495/499 (99.20%), Query Frame = 1
Query:    4 MAAMQQKLRTSLAATLSDTGLLRSDGLINGKWVKAASGKLFPVNDPGTDTKVASVSAFGEADAKLAVSAAEQSFDAWRSRTMQERGRVLSRWSELIGENSNDLATIMCLESGKPKAESKGEVNYAMSFINMYAGMQTNGMVLPQQTDSHLLMVTKEPVGVCALLTPWNFPAAMFTRKAAPALMAGCTIVLKPAEDTPLTALALAWLWERAGGPKGVVNVVPTPRELVQEVGNVLTTDEAVRKISFTGSTAVGKHLLKQAAGTVKKTSMELGGNAPFVVFDDANLELAVNGAMTAKFRFGGQVCIAPNRFLVQEGIYEAFVAKMAERIRALRVGDGLDSRTNMGPLINLAARDKVAGLVKDALDKGAEVVCGGQLEQHEMGNNFFAPTLLSGCTLDMRISQEEIFGPVVAVMKFKDADEALAISNSSRSGLAGYVYTQDYSRGMRFAGKLEVGMVGMNESSISSCVVPFGGVKESGMGREGSVMGMDEFMEVKSICLGGI 1500
            MAAMQQKLRTSLAATLSDTGLLRSDGLINGKWVKAASGKLFPVNDPGTDTKVASVSAFGEADAKLAVSAAEQSFDAWRS+TMQERGR+LSRWSELIGENS+DLATIMCLESGKPKAESKGEVNYAMSFINMYAGMQTNGMVLPQQTDSHLLMVTKEPVGVCALLTPWNFPAAMFTRKAAPALMAGCTIVLKPAEDTPLTALALAWLWERAGGPKGVVNVVPTPRELVQEVGNVLTTDEAVRKISFTGSTAVGKHLLKQAAGTVKKTSMELGGNAPFVVFDDANLELAVNGAMTAKFRFGGQVCIAPNRFLVQEGIYEAFVAKMAE+IRALRVGDGLDSRTNMGPLINLAARDKVAGLVKDA+DKGA+VVCGGQLEQHEMGNNFFAPTLL GCTLDMRIS EEIFGPVVAVMKFKD DEAL ISNSSRSGLAGYVYTQDYSRGMRFAGKLEVGMVGMNESSISSCVVPFGGVKESGMGREGSVMGMDEFMEVKSICLGGI
Sbjct:    1 MAAMQQKLRTSLAATLSDTGLLRSDGLINGKWVKAASGKLFPVNDPGTDTKVASVSAFGEADAKLAVSAAEQSFDAWRSKTMQERGRLLSRWSELIGENSSDLATIMCLESGKPKAESKGEVNYAMSFINMYAGMQTNGMVLPQQTDSHLLMVTKEPVGVCALLTPWNFPAAMFTRKAAPALMAGCTIVLKPAEDTPLTALALAWLWERAGGPKGVVNVVPTPRELVQEVGNVLTTDEAVRKISFTGSTAVGKHLLKQAAGTVKKTSMELGGNAPFVVFDDANLELAVNGAMTAKFRFGGQVCIAPNRFLVQEGIYEAFVAKMAEQIRALRVGDGLDSRTNMGPLINLAARDKVAGLVKDAIDKGADVVCGGQLEQHEMGNNFFAPTLLGGCTLDMRISHEEIFGPVVAVMKFKDVDEALTISNSSRSGLAGYVYTQDYSRGMRFAGKLEVGMVGMNESSISSCVVPFGGVKESGMGREGSVMGMDEFMEVKSICLGGI 499          
BLAST of mRNA_E-siliculosus-1a_M_contig87.16747.1 vs. uniprot
Match: X2KY60_SCYLO (Succinate semialdehyde dehydrogenase n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=X2KY60_SCYLO)

HSP 1 Score: 837 bits (2163), Expect = 2.680e-301
Identity = 424/499 (84.97%), Postives = 463/499 (92.79%), Query Frame = 1
Query:    4 MAAMQQKLRTSLAATLSDTGLLRSDGLINGKWVKAASGKLFPVNDPGTDTKVASVSAFGEADAKLAVSAAEQSFDAWRSRTMQERGRVLSRWSELIGENSNDLATIMCLESGKPKAESKGEVNYAMSFINMYAGMQTNGMVLPQQTDSHLLMVTKEPVGVCALLTPWNFPAAMFTRKAAPALMAGCTIVLKPAEDTPLTALALAWLWERAGGPKGVVNVVPTPRELVQEVGNVLTTDEAVRKISFTGSTAVGKHLLKQAAGTVKKTSMELGGNAPFVVFDDANLELAVNGAMTAKFRFGGQVCIAPNRFLVQEGIYEAFVAKMAERIRALRVGDGLDSRTNMGPLINLAARDKVAGLVKDALDKGAEVVCGGQLEQHEMGNNFFAPTLLSGCTLDMRISQEEIFGPVVAVMKFKDADEALAISNSSRSGLAGYVYTQDYSRGMRFAGKLEVGMVGMNESSISSCVVPFGGVKESGMGREGSVMGMDEFMEVKSICLGGI 1500
            MAAMQQK+R+SLAA L ++GLLRS+GLINGKW+ + SGK F V DP T T+ A+V+A+GE D KLAVSAAEQSFD+WRS+TMQERGRVLSRWSELIG+NS+DLATIMCLESGKPKAESKGE+NYA+SFI+MYAGMQT G VLP QTD+HLL+ TKEP+GVC+LLTPWNFPAAMF RKAAPA+MAGCTIVLKPAEDTPLTALALAWLWE+AGGPKGVVNVVPTPRELVQEVGNVLTTDEAVRKISFTGSTAVGK LLKQAA TVK+TSMELGGNAPFVVFDDA+L+ AVNGAM AKFRFGGQVCIAPNRF++QEGIYEAFVAKMAERIR LRVGDGL+  TNMGPLINLAAR+KVA LV DA+DKGAEVVCGG +  HEMG NFFAPTLL GCTLDMRIS EEIFGPVVA +KF+DA+EALA+SNSSRSGLAGYVYTQDYSRGMRFAGKLEVGMVG+NESSISS VVPFGGVKESGMGREGS +GMDEFMEVK ICLGGI
Sbjct:    1 MAAMQQKVRSSLAAALVESGLLRSEGLINGKWLASKSGKTFQVFDPATATEFAAVAAYGEEDTKLAVSAAEQSFDSWRSKTMQERGRVLSRWSELIGKNSSDLATIMCLESGKPKAESKGEINYAISFIDMYAGMQTKGTVLPAQTDTHLLLATKEPIGVCSLLTPWNFPAAMFARKAAPAIMAGCTIVLKPAEDTPLTALALAWLWEKAGGPKGVVNVVPTPRELVQEVGNVLTTDEAVRKISFTGSTAVGKQLLKQAASTVKRTSMELGGNAPFVVFDDADLDRAVNGAMAAKFRFGGQVCIAPNRFMIQEGIYEAFVAKMAERIRGLRVGDGLELSTNMGPLINLAAREKVASLVNDAVDKGAEVVCGGAVG-HEMGANFFAPTLLVGCTLDMRISHEEIFGPVVACVKFQDAEEALAMSNSSRSGLAGYVYTQDYSRGMRFAGKLEVGMVGINESSISSSVVPFGGVKESGMGREGSELGMDEFMEVKHICLGGI 498          
BLAST of mRNA_E-siliculosus-1a_M_contig87.16747.1 vs. uniprot
Match: A0A835ZAJ4_9STRA (Succinate-semialdehyde dehydrogenase [NADP+] GabD n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAJ4_9STRA)

HSP 1 Score: 516 bits (1330), Expect = 4.660e-175
Identity = 271/485 (55.88%), Postives = 340/485 (70.10%), Query Frame = 1
Query:   49 LSDTGLLRSDGLINGKWVKAASGKLFPVNDPGTDTKVASVSAFGEADAKLAVSAAEQSFDAWRSRTMQERGRVLSRWSELIGENSNDLATIMCLESGKPKAESKGEVNYAMSFINMYAG--MQTNGMVLPQQTDSHLLMVTKEPVGVCALLTPWNFPAAMFTRKAAPALMAGCTIVLKPAEDTPLTALALAWLWERAGGPKGVVNVVPTPRELVQEVGNVLTTDEAVRKISFTGSTAVGKHLLKQAAGTVKKTSMELGGNAPFVVFDDANLELAVNGAMTAKFRFGGQVCIAPNRFLVQEGIYEAFVAKMAERIRALRVGDGLDSRTNMGPLINLAARDKVAGLVKDALDKGAEVVCGG-QLEQHEMGNNFFAPTLLSGCTLDMRISQEEIFGPVVAVMKFKDADEALAISNSSRSGLAGYVYTQDYSRGMRFAGKLEVGMVGMNESSISSCVVPFGGVKESGMGREGSVMGMDEFMEVKSICLG 1494
            L D+ L R    +NG+WV A SGK F +++P T   + SV     +D   A++AA+ +   WR  + ++R   L +W+ L+  N  DLA IM LESGKP AES+GEV YA+SF++ +A    + NG V+P  T S  L+V K+ +GVC+LLTPWNFPAAM TRKAAPAL AGCT+V+KPAEDTPLTALALA L E+AG P GV+N+V TPR  V  VG  + T   V K+SFTGSTAVGK LL  AA  VKK SMELGGNAPF+VFDDA+L+ A +G M +KFRFGGQ C+  NR +VQ G+ EAF  K+  R+ AL+VGD L S TN+GPLIN AA  KV G+VKDAL KGA+ + GG Q E  E G+ F  P LL  C + M +  +EIFGPVV +M F+  DEA+ I+N    GLAGY Y+Q+  R  R A +LEVGMVG+NE+ IS   +PFGGVKE+G+GREGSV GMD+FME+K ICLG
Sbjct:    6 LKDSALSRDKAYVNGQWVAAESGKTFEISNPATGEMLTSVPTMAASDVNEAIAAAKAALPEWRDGSYKKREGALHKWAGLMRSNMEDLARIMTLESGKPLAESRGEVAYALSFLDFFAEETKRVNGAVIPPPTPSQRLLVIKQAIGVCSLLTPWNFPAAMITRKAAPALAAGCTVVIKPAEDTPLTALALAALAEQAGFPPGVINIVTTPRAEVASVGEAMCTHPDVAKVSFTGSTAVGKILLTHAAKGVKKVSMELGGNAPFIVFDDADLDKAADGLMASKFRFGGQTCVCTNRVMVQSGVMEAFTEKVRARVEALKVGDPLVSGTNLGPLINAAAVTKVRGMVKDALSKGAQALVGGDQGEDGEPGSCFVKPVLLGNCDMSMSVCSQEIFGPVVPLMSFETEDEAVRIANDVPGGLAGYFYSQNVGRIFRVAERLEVGMVGVNETVISKETIPFGGVKEAGLGREGSVYGMDDFMELKHICLG 490          
BLAST of mRNA_E-siliculosus-1a_M_contig87.16747.1 vs. uniprot
Match: N6Y5H3_9RHOO (Succinate semialdehyde dehydrogenase n=3 Tax=unclassified Thauera TaxID=2609274 RepID=N6Y5H3_9RHOO)

HSP 1 Score: 501 bits (1289), Expect = 5.860e-169
Identity = 260/486 (53.50%), Postives = 342/486 (70.37%), Query Frame = 1
Query:   49 LSDTGLLRSDGLINGKWVKAASGKLFPVNDPGTDTKVASVSAFGEADAKLAVSAAEQSFDAWRSRTMQERGRVLSRWSELIGENSNDLATIMCLESGKPKAESKGEVNYAMSFINMYA--GMQTNGMVLPQQTDSHLLMVTKEPVGVCALLTPWNFPAAMFTRKAAPALMAGCTIVLKPAEDTPLTALALAWLWERAGGPKGVVNVVPTPRELVQEVGNVLTTDEAVRKISFTGSTAVGKHLLKQAAGTVKKTSMELGGNAPFVVFDDANLELAVNGAMTAKFRFGGQVCIAPNRFLVQEGIYEAFVAKMAERIRALRVGDGLDSRTNMGPLINLAARDKVAGLVKDALDKGAEVVCGGQLEQHEMGNNFFAPTLLSGCTLDMRISQEEIFGPVVAVMKFKDADEALAISNSSRSGLAGYVYTQDYSRGMRFAGKLEVGMVGMNESSISSCVVPFGGVKESGMGREGSVMGMDEFMEVKSICLGGI 1500
            L+DTGLLR+   I+G+W+ A  G  F V +P   ++V SV   G A+ + A++AA+ +  AWR+RT +ER  +L RW ELI  N  DLA +M  E GKP AE++GEV Y  SFI  +A  G +  G V+P       ++V K+ +GV A +TPWNFP AM TRKA PAL AGCT+V+KPAEDTPL ALALA L ERAG P GV+N+V T R    EVG  LT + AVRK+SFTGSTAVGK L++Q AGTVKK ++ELGGNAPF+VFDDA+L+ AV GAM +K+R  GQ C+  NR LVQ+GIY+AF AK+AE +  L+VG GL      GPLIN  A  KV  L+ DA+DKGA+V+CGG+  +H +G NF+ PT+++  T  MR+++EEIFGPV  + +F   +EA+ ++N +  GLA Y Y +D +R  R A  LE G+VG+NE  IS+ V PFGGVKESG+GREGS  G+D+F+E+K +C+GGI
Sbjct:    3 LNDTGLLRAQAYIDGQWLAADDGGSFDVTNPADGSRVGSVPDMGAAETRRAIAAADAALPAWRARTAKERAAILRRWYELILANQEDLAVLMSTEQGKPLAEARGEVVYGASFIEWFAEEGKRIYGDVIPSHGADKRIVVVKQAIGVVAAITPWNFPIAMITRKAGPALAAGCTMVIKPAEDTPLCALALAVLAERAGLPAGVLNIVTTNR--APEVGGELTANPAVRKLSFTGSTAVGKLLMRQCAGTVKKVALELGGNAPFIVFDDADLDAAVAGAMASKYRNAGQTCVCANRLLVQDGIYDAFAAKLAEAVARLKVGPGLSGEVQQGPLINADAVAKVEELLADAVDKGAQVLCGGK--RHALGGNFYEPTIVTDVTAQMRVAREEIFGPVAPLFRFHSEEEAVRMANDTEFGLAAYFYARDIARVWRVAEALEYGIVGINEGIISTEVAPFGGVKESGIGREGSRYGIDDFVEIKYLCMGGI 484          
BLAST of mRNA_E-siliculosus-1a_M_contig87.16747.1 vs. uniprot
Match: UPI0016737EC1 (NAD-dependent succinate-semialdehyde dehydrogenase n=1 Tax=Saccharospirillum salsuginis TaxID=418750 RepID=UPI0016737EC1)

HSP 1 Score: 497 bits (1280), Expect = 1.250e-167
Identity = 251/481 (52.18%), Postives = 343/481 (71.31%), Query Frame = 1
Query:   64 LLRSDGLINGKWVKAASGKLFPVNDPGTDTKVASVSAFGEADAKLAVSAAEQSFDAWRSRTMQERGRVLSRWSELIGENSNDLATIMCLESGKPKAESKGEVNYAMSFINMYA--GMQTNGMVLPQQTDSHLLMVTKEPVGVCALLTPWNFPAAMFTRKAAPALMAGCTIVLKPAEDTPLTALALAWLWERAGGPKGVVNVVPTPRELVQEVGNVLTTDEAVRKISFTGSTAVGKHLLKQAAGTVKKTSMELGGNAPFVVFDDANLELAVNGAMTAKFRFGGQVCIAPNRFLVQEGIYEAFVAKMAERIRALRVGDGLDSRTNMGPLINLAARDKVAGLVKDALDKGAEVVCGGQLEQHEMGNNFFAPTLLSGCTLDMRISQEEIFGPVVAVMKFKDADEALAISNSSRSGLAGYVYTQDYSRGMRFAGKLEVGMVGMNESSISSCVVPFGGVKESGMGREGSVMGMDEFMEVKSICLGGI 1500
            L+R    +NG+WV+A S ++ P+ +P    ++A+V  FG+ADA+ AV AA  +F  WR+ T +ER ++L RW +LI ++ +DLA +M LE GKP AESKGEV Y  SF+  +     +T G  +P   +   ++  K+PVGVC+ +TPWNFP AM TRK APA+ AGCT V+KPAE TPLTALALA L E+AG PKGV+N++     +  +VG VL+T   V K+SFTGST VGK L+KQ+A TVK+ SMELGGNAPF+VFDDA+++ AV GAM +K+R  GQ C+  NRFLVQ+ +Y+AF   +AE+ + L VG+GLD     GPLIN A R KV  L+KDA DKGA+++ GGQ   H +G NFF PT+L+  T DMR+SQEEIFGP+ A+ +FKD DEA+ ++N +  GLA Y Y+ + +R  R +  L+ G+VG+NE  IS+ V PFGG+KESG+GREGS  G+DE++E+K +C+GG+
Sbjct:    5 LIRQKSYVNGQWVEAESARVHPIVNPANGEQIATVPDFGKADAERAVEAAHTAFKTWRTTTAKERAQILRRWYDLIMQHQDDLAELMTLECGKPLAESKGEVAYGASFVEWFGEEAKRTYGDAIPTPKNDRRILAIKQPVGVCSAITPWNFPLAMITRKVAPAIAAGCTAVVKPAEATPLTALALADLAEQAGFPKGVLNIITASHGV--DVGEVLSTHPLVSKVSFTGSTPVGKALIKQSADTVKRVSMELGGNAPFIVFDDADIDAAVEGAMASKYRNTGQTCVCVNRFLVQDSVYDAFAQALAEKTKGLTVGNGLDDGVQQGPLINEAGRQKVETLLKDATDKGAKILTGGQ--PHALGGNFFEPTVLTDITPDMRLSQEEIFGPLSAITRFKDEDEAILLANDTPFGLAAYFYSGNLARIWRVSEALDYGIVGINEGIISTEVAPFGGMKESGLGREGSHYGIDEYLEIKYLCMGGL 481          
BLAST of mRNA_E-siliculosus-1a_M_contig87.16747.1 vs. uniprot
Match: UPI00035CBFDD (NAD-dependent succinate-semialdehyde dehydrogenase n=1 Tax=Kiloniella laminariae TaxID=454162 RepID=UPI00035CBFDD)

HSP 1 Score: 497 bits (1279), Expect = 1.770e-167
Identity = 254/486 (52.26%), Postives = 336/486 (69.14%), Query Frame = 1
Query:   49 LSDTGLLRSDGLINGKWVKAASGKLFPVNDPGTDTKVASVSAFGEADAKLAVSAAEQSFDAWRSRTMQERGRVLSRWSELIGENSNDLATIMCLESGKPKAESKGEVNYAMSFINMYAG--MQTNGMVLPQQTDSHLLMVTKEPVGVCALLTPWNFPAAMFTRKAAPALMAGCTIVLKPAEDTPLTALALAWLWERAGGPKGVVNVVPTPRELVQEVGNVLTTDEAVRKISFTGSTAVGKHLLKQAAGTVKKTSMELGGNAPFVVFDDANLELAVNGAMTAKFRFGGQVCIAPNRFLVQEGIYEAFVAKMAERIRALRVGDGLDSRTNMGPLINLAARDKVAGLVKDALDKGAEVVCGGQLEQHEMGNNFFAPTLLSGCTLDMRISQEEIFGPVVAVMKFKDADEALAISNSSRSGLAGYVYTQDYSRGMRFAGKLEVGMVGMNESSISSCVVPFGGVKESGMGREGSVMGMDEFMEVKSICLGGI 1500
            L D  LLR    I+G W+ A SG++FPV +P     +ASV   GEA+   A+ AA+ +F +W+ RT +ER  ++ +W ELI  N +DLA +M +E GKP AE+KGEV Y  SF+  +A    +  G  +P+      L+VTKEP+GV A +TPWNFP AM TRK APA+ AGCT+V+KPAEDTPL A ALA L  RAG PKGV+N+V     + +++G  +T    VRK++FTGST +GK L+KQ A TVKKTSMELGGNAPF+VFDDA+L+ AV GAM +KFR  GQ C+  NR LVQEG+YEAF  K+ +R+  L+V  G    +  GPLIN AA  KV+ L+ DA+ KGA+ V GG+   H++G NFF PT+++G T DMRI  EEIFGPV  + KFK  +EA+ ++N +  GLA Y Y++D  R  R +  LE G+VG+NE  IS+ V PFGGVKESG+GREGS  GM++F+E+K +C+GGI
Sbjct:    3 LKDPSLLRDKCYIDGSWISADSGEIFPVTNPANGETIASVPRMGEAETHRAIEAAQTAFASWKDRTAKERANIVRKWYELIMANQDDLALLMTMEQGKPLAEAKGEVAYGASFVEWFAEECKRVYGDTIPEHLPGRRLVVTKEPIGVVAAITPWNFPIAMITRKCAPAIAAGCTVVVKPAEDTPLCAFALAELAHRAGIPKGVLNIVTG---VAKQIGKAMTESTLVRKLTFTGSTPIGKLLMKQCADTVKKTSMELGGNAPFIVFDDADLDAAVEGAMLSKFRNAGQTCVCANRILVQEGVYEAFAEKLTKRVSELKVAPGTTDGSQQGPLINSAAATKVSELINDAVGKGAKTVIGGK--PHDLGGNFFEPTVITGVTDDMRIFSEEIFGPVAPLYKFKTEEEAVRMANDTPFGLASYFYSRDIGRVWRVSRALEYGIVGINEGIISNEVAPFGGVKESGVGREGSKYGMEDFLEIKYLCMGGI 483          
BLAST of mRNA_E-siliculosus-1a_M_contig87.16747.1 vs. uniprot
Match: A0A0M2RC19_9PROT (Succinate-semialdehyde dehydrogenase n=6 Tax=Kiloniella TaxID=454159 RepID=A0A0M2RC19_9PROT)

HSP 1 Score: 497 bits (1279), Expect = 1.830e-167
Identity = 259/486 (53.29%), Postives = 334/486 (68.72%), Query Frame = 1
Query:   49 LSDTGLLRSDGLINGKWVKAASGKLFPVNDPGTDTKVASVSAFGEADAKLAVSAAEQSFDAWRSRTMQERGRVLSRWSELIGENSNDLATIMCLESGKPKAESKGEVNYAMSFINMYAG--MQTNGMVLPQQTDSHLLMVTKEPVGVCALLTPWNFPAAMFTRKAAPALMAGCTIVLKPAEDTPLTALALAWLWERAGGPKGVVNVVPTPRELVQEVGNVLTTDEAVRKISFTGSTAVGKHLLKQAAGTVKKTSMELGGNAPFVVFDDANLELAVNGAMTAKFRFGGQVCIAPNRFLVQEGIYEAFVAKMAERIRALRVGDGLDSRTNMGPLINLAARDKVAGLVKDALDKGAEVVCGGQLEQHEMGNNFFAPTLLSGCTLDMRISQEEIFGPVVAVMKFKDADEALAISNSSRSGLAGYVYTQDYSRGMRFAGKLEVGMVGMNESSISSCVVPFGGVKESGMGREGSVMGMDEFMEVKSICLGGI 1500
            L D  LLR    ING W  A SG+ F V +P     +ASV   GE +   A+ AAE +F  W+ +T +ER +++ +W ELI EN +DLA +M LE GKP AE+ GEV Y  SF+  +A    +  G  +P+      L+VTKEP+GV A +TPWNFP AM TRK APA+ AGCT+V+KPAEDTPL+A ALA L ERAG PKGV+N+V     + Q++G  LT  +AVRK++FTGST VGK L+KQ A TVKKTSMELGGNAPF+VFDDA+L+ AV GAM +KFR  GQ C+  NR LVQEGIY+AF  K+ E+  AL+V  G +     GPLIN AA  KV+ L+KDA+ KGA+   GG    H++G  FF PT+++G T DMRI  EEIFGPV  + KFK  +EA+ ++N +  GLA Y Y++D  R  R +  LE G+VG+NE  IS+ V PFGGVKESG+GREGS  GM++F+E+K +C+GGI
Sbjct:    4 LKDPSLLRDKCYINGAWADADSGETFAVTNPANGDVLASVPKMGETETLRAIQAAEDAFGPWKDKTAKERAQIMRKWFELIMENQSDLALLMTLEQGKPLAEAMGEVAYGASFVEWFAEECKRIYGDTIPEHLPGRRLVVTKEPIGVVAAITPWNFPIAMITRKCAPAIAAGCTVVIKPAEDTPLSAFALAELAERAGIPKGVMNIVSG---IPQQIGKALTESKAVRKLTFTGSTPVGKLLMKQCADTVKKTSMELGGNAPFIVFDDADLDAAVEGAMMSKFRNAGQTCVCSNRILVQEGIYDAFAKKLVEKTAALKVAPGTEDGAQQGPLINAAASAKVSELIKDAVSKGAKTEIGGN--PHDLGGTFFEPTVITGVTDDMRIFSEEIFGPVAPLYKFKTEEEAVQMANDTPFGLAAYFYSRDIGRVWRVSRALEYGIVGINEGIISNEVAPFGGVKESGVGREGSKYGMEDFLEIKYLCIGGI 484          
BLAST of mRNA_E-siliculosus-1a_M_contig87.16747.1 vs. uniprot
Match: A0A6A5L1J0_LUPAL (Succinate-semialdehyde dehydrogenase n=46 Tax=cellular organisms TaxID=131567 RepID=A0A6A5L1J0_LUPAL)

HSP 1 Score: 498 bits (1283), Expect = 1.840e-167
Identity = 261/485 (53.81%), Postives = 337/485 (69.48%), Query Frame = 1
Query:   46 TLSDTGLLRSDGLINGKWVKAASGKLFPVNDPGTDTKVASVSAFGEADAKLAVSAAEQSFDAWRSRTMQERGRVLSRWSELIGENSNDLATIMCLESGKPKAESKGEVNYAMSFINMYA--GMQTNGMVLPQQTDSHLLMVTKEPVGVCALLTPWNFPAAMFTRKAAPALMAGCTIVLKPAEDTPLTALALAWLWERAGGPKGVVNVVPTPRELVQEVGNVLTTDEAVRKISFTGSTAVGKHLLKQAAGTVKKTSMELGGNAPFVVFDDANLELAVNGAMTAKFRFGGQVCIAPNRFLVQEGIYEAFVAKMAERIRALRVGDGLDSRTNMGPLINLAARDKVAGLVKDALDKGAEVVCGGQLEQHEMGNNFFAPTLLSGCTLDMRISQEEIFGPVVAVMKFKDADEALAISNSSRSGLAGYVYTQDYSRGMRFAGKLEVGMVGMNESSISSCVVPFGGVKESGMGREGSVMGMDEFMEVKSICLG 1494
            +L+D GLLR+ G +NG W  A SGK FPV +P T   +A V+  G A+ + A+ AA  +  AW+++T +ER  ++ RW ELI     DLA +M  E GKP  ES+GEV Y  SFI  +A  G +  G V+P    +  ++V KE +GV A +TPWNFP AM TRK APAL AGCT+V+KPAEDTPL+ALALA L ERAG P GV N+V         +GN LT    VRK+SFTGST VGK L++QAA TVKK S+ELGGNAPF+VFDDA+L+ AV GAM +K+R  GQ C+  NR LVQ G+Y+AF AK+AE ++AL+VGDG ++    GPLIN  A  KV  L+ DAL+KGA V  GG+  +H +G  FF PT+L+G T DMR+++EEIFGPV  + KF+  ++A+ ++N +  GLA Y Y++D  R  R A KLE GMVG+NE  IS+ V PFGGVKESG+GREGS  G+D+FMEVK +CLG
Sbjct:   42 SLNDQGLLRTKGYVNGAWRAADSGKSFPVTNPATGAVIAEVADMGAAETRAAIDAANAALPAWKAKTAKERAAIMRRWYELILAAQEDLAQLMTAEQGKPLTESRGEVVYGASFIEWFAEEGKRAYGDVIPTFAGNKRIVVLKEAIGVVAAITPWNFPNAMITRKVAPALAAGCTVVVKPAEDTPLSALALAELAERAGFPAGVFNIVMGSEPAA--IGNELTHSPIVRKVSFTGSTEVGKLLMRQAASTVKKVSLELGGNAPFIVFDDADLDEAVKGAMASKYRNAGQTCVCANRLLVQAGVYDAFAAKLAEAVKALKVGDGTEAGVTQGPLINADAIAKVEELMGDALEKGATVALGGK--RHALGGTFFEPTILTGITTDMRVAREEIFGPVAPLFKFETEEDAIRMANDTEFGLAAYFYSRDIGRVWRVAEKLEYGMVGINEGIISTEVAPFGGVKESGIGREGSKYGLDDFMEVKYLCLG 522          
BLAST of mRNA_E-siliculosus-1a_M_contig87.16747.1 vs. uniprot
Match: A0A4D9D8P5_9STRA (Succinate-semialdehyde dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8P5_9STRA)

HSP 1 Score: 499 bits (1284), Expect = 1.880e-167
Identity = 258/489 (52.76%), Postives = 336/489 (68.71%), Query Frame = 1
Query:   34 SLAATLSDTGLLRSDGLINGKWVKAASGKLFPVNDPGTDTKVASVSAFGEADAKLAVSAAEQSFDAWRSRTMQERGRVLSRWSELIGENSNDLATIMCLESGKPKAESKGEVNYAMSFINMYA--GMQTNGMVLPQQTDSHLLMVTKEPVGVCALLTPWNFPAAMFTRKAAPALMAGCTIVLKPAEDTPLTALALAWLWERAGGPKGVVNVVPTPRELVQEVGNVLTTDEAVRKISFTGSTAVGKHLLKQAAGTVKKTSMELGGNAPFVVFDDANLELAVNGAMTAKFRFGGQVCIAPNRFLVQEGIYEAFVAKMAERIRALRVGDGLDSRTNMGPLINLAARDKVAGLVKDALDKGAEVVCGGQLEQHEMGNNFFAPTLLSGCTLDMRISQEEIFGPVVAVMKFKDADEALAISNSSRSGLAGYVYTQDYSRGMRFAGKLEVGMVGMNESSISSCVVPFGGVKESGMGREGSVMGMDEFMEVKSICLG 1494
            S +  L D GLLR +  +NGKWVKA  GK + V DP T   +A V + G AD + A+ AA  +++ W+ +T ++RG VL RW +LI  ++ DLA I+ LE+GKP AES+GEV Y  SF+  YA    +  G V+P       L+  K+PVGV AL+TPWNFP AM TRKAAPAL AGC +V+KPAEDTPL+ALALA L ERAG P G++NV+  PRE   EVG  L+T   VRK+SFTGST VGK L++ +A TVKK S+ELGGNAP +VFDDA++E A+NG + AKFR  GQ C++PNR LVQ  IY+ FV+ +AE++  L+VG GL     +GPLIN    +KV   V DA+ KGA+VV GG L  H +G  FF PT+L  C  DM +  EE FGPV +V KF+   EA+ ++N++  GLA YV+  D  +G R A  +E GMVG+NE  IS+ V PFGGVKESG+GREG+ +G+DE++E K +CLG
Sbjct:   47 SASEFLDDPGLLRDEAYVNGKWVKAKGGKTYEVTDPATHVVIAKVPSMGAADTRGAIEAAAAAWEGWKQKTPKQRGDVLRRWYDLIQHHTMDLAKILTLENGKPLAESRGEVGYGASFVEFYAEEAKRAYGEVIPSPIPGRRLVTIKQPVGVAALVTPWNFPIAMITRKAAPALAAGCPVVIKPAEDTPLSALALAELAERAGVPPGILNVLTCPREHAAEVGLELSTSLNVRKLSFTGSTKVGKILMRDSASTVKKLSLELGGNAPLIVFDDADIENAINGVLAAKFRNAGQTCVSPNRLLVQSRIYDEFVSTLAEKVANLQVGHGLQPGVQIGPLINPGGLEKVQRHVHDAVKKGAQVVTGGDL--HALGGTFFEPTVLGDCRPDMLVFTEETFGPVCSVFKFQAEAEAIEMANATPFGLAAYVFAGDVGKGWRVAEAIEAGMVGVNEGMISTAVAPFGGVKESGVGREGAKVGIDEYLETKYLCLG 533          
BLAST of mRNA_E-siliculosus-1a_M_contig87.16747.1 vs. uniprot
Match: UPI00193BAF5D (NAD-dependent succinate-semialdehyde dehydrogenase n=1 Tax=Azospira restricta TaxID=404405 RepID=UPI00193BAF5D)

HSP 1 Score: 495 bits (1275), Expect = 8.140e-167
Identity = 260/486 (53.50%), Postives = 340/486 (69.96%), Query Frame = 1
Query:   49 LSDTGLLRSDGLINGKWVKAASGKLFPVNDPGTDTKVASVSAFGEADAKLAVSAAEQSFDAWRSRTMQERGRVLSRWSELIGENSNDLATIMCLESGKPKAESKGEVNYAMSFINMYA--GMQTNGMVLPQQTDSHLLMVTKEPVGVCALLTPWNFPAAMFTRKAAPALMAGCTIVLKPAEDTPLTALALAWLWERAGGPKGVVNVVPTPRELVQEVGNVLTTDEAVRKISFTGSTAVGKHLLKQAAGTVKKTSMELGGNAPFVVFDDANLELAVNGAMTAKFRFGGQVCIAPNRFLVQEGIYEAFVAKMAERIRALRVGDGLDSRTNMGPLINLAARDKVAGLVKDALDKGAEVVCGGQLEQHEMGNNFFAPTLLSGCTLDMRISQEEIFGPVVAVMKFKDADEALAISNSSRSGLAGYVYTQDYSRGMRFAGKLEVGMVGMNESSISSCVVPFGGVKESGMGREGSVMGMDEFMEVKSICLGGI 1500
            L D  LL++   I+G WV A SG    V +P T  ++A V   G  + + A++AA+ +  AWR++T +ER  +L RW +LI  + +DLA +M LE GKP AE+KGEV Y  SFI  +A  G +  G  +P  +    L+V K+PVGV A +TPWNFP AM TRK  PAL AGCT V+KPAE TPL+ALALA L  RAG P GV+NVV T R     VG+VLT    VRK+SFTGST VGK L+   AGTVK+ S+ELGGNAPF+VFDDA+L+ AV GA+ +K+R  GQ C+  NR LVQ+G+Y+AF AK+AE + A++V DGL++ T +GPLIN AA  KV GLV DA+ KGA+ V GG   +H  G NF+APT+L+G T DM ++QEEIFGPV  + +F+  DEA+ ++N +RSGLA Y Y++D  R  R A +LE GMVG+NE  IS+ V PFGGVKESG+GREGS  G+DE++ +K +CLGG+
Sbjct:    6 LKDASLLKTQAFIDGNWVAADSGAEHAVVNPATGAEIARVPDMGATETERAIAAADAALPAWRAKTAKERAALLRRWHDLILAHQDDLAVLMTLEQGKPLAEAKGEVAYGASFIEWFAEEGKRVYGETIPAPSGDKRLLVIKQPVGVTAAITPWNFPIAMITRKVGPALAAGCTSVVKPAEATPLSALALAELATRAGLPAGVLNVVTTARPAA--VGDVLTGSPIVRKLSFTGSTPVGKRLMAACAGTVKRVSLELGGNAPFIVFDDADLDAAVRGALASKYRNAGQTCVCANRLLVQDGVYDAFAAKLAEAVAAMKVDDGLENGTQIGPLINEAAVKKVEGLVADAVAKGAKAVLGGT--RHAKGGNFYAPTVLTGVTTDMAVAQEEIFGPVAPLFRFRTDDEAIRMANDTRSGLASYFYSRDIGRVWRVAEQLEYGMVGINEGIISNEVAPFGGVKESGVGREGSHYGIDEYLTIKYLCLGGM 487          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig87.16747.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW35_ECTSI0.000e+098.00Aldehyde Dehydrogenase n=2 Tax=Ectocarpus TaxID=28... [more]
X2KY60_SCYLO2.680e-30184.97Succinate semialdehyde dehydrogenase n=1 Tax=Scyto... [more]
A0A835ZAJ4_9STRA4.660e-17555.88Succinate-semialdehyde dehydrogenase [NADP+] GabD ... [more]
N6Y5H3_9RHOO5.860e-16953.50Succinate semialdehyde dehydrogenase n=3 Tax=uncla... [more]
UPI0016737EC11.250e-16752.18NAD-dependent succinate-semialdehyde dehydrogenase... [more]
UPI00035CBFDD1.770e-16752.26NAD-dependent succinate-semialdehyde dehydrogenase... [more]
A0A0M2RC19_9PROT1.830e-16753.29Succinate-semialdehyde dehydrogenase n=6 Tax=Kilon... [more]
A0A6A5L1J0_LUPAL1.840e-16753.81Succinate-semialdehyde dehydrogenase n=46 Tax=cell... [more]
A0A4D9D8P5_9STRA1.880e-16752.76Succinate-semialdehyde dehydrogenase n=2 Tax=Monod... [more]
UPI00193BAF5D8.140e-16753.50NAD-dependent succinate-semialdehyde dehydrogenase... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig87contigE-siliculosus-1a_M_contig87:441741..447228 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1500
Model size1990
Exons9
Ec32 orthologEc-01_003210.1
Ec32 ortholog descriptionAldehyde dehydrogenase
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.C
EC1.2.1.16,1.2.1.20,1.2.1.24,1.2.1.79
EggNOG OGsCOG1012@1,KOG2451@2759
EggNOG free text desc.succinate-semialdehyde dehydrogenase (NAD ) activity
GOsGO:0000166,GO:0001505,GO:0003674,GO:0003824,GO:0004777,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006083,GO:0006091,GO:0006105,GO:0006518,GO:0006520,GO:0006536,GO:0006538,GO:0006540,GO:0006541,GO:0006575,GO:0006629,GO:0006631,GO:0006643,GO:0006644,GO:0006650,GO:0006664,GO:0006665,GO:0006672,GO:0006677,GO:0006678,GO:0006681,GO:0006687,GO:0006749,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007275,GO:0007399,GO:0007417,GO:0008150,GO:0008152,GO:0009013,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009448,GO:0009450,GO:0009791,GO:0009987,GO:0015980,GO:0016043,GO:0016054,GO:0016491,GO:0016620,GO:0016903,GO:0016999,GO:0017144,GO:0019318,GO:0019374,GO:0019637,GO:0019752,GO:0022607,GO:0022900,GO:0022904,GO:0031406,GO:0031974,GO:0032501,GO:0032502,GO:0032787,GO:0033554,GO:0034599,GO:0034641,GO:0036094,GO:0042133,GO:0042135,GO:0042221,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043177,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0043648,GO:0043649,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0046395,GO:0046459,GO:0046486,GO:0046983,GO:0048037,GO:0048731,GO:0048856,GO:0050662,GO:0050896,GO:0051186,GO:0051259,GO:0051260,GO:0051262,GO:0051287,GO:0051289,GO:0051716,GO:0055114,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070887,GO:0071704,GO:0071840,GO:0072329,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1903509
KEGG ModuleM00027
KEGG Pathwayko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120
KEGG ReactionR00713,R00714,R02401
KEGG koko:K00135,ko:K00139
KEGG rclassRC00080
Preferred nameALDH5A1
Seed eggNOG ortholog2880.D7FW35
Seed ortholog evalue6.4e-279
Seed ortholog score966.1
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936333.361939-UTR-E-siliculosus-1a_M_contig87:441740..4422271622936333.361939-UTR-E-siliculosus-1a_M_contig87:441740..442227Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig87 441741..442227 -
1696251030.3721247-UTR-E-siliculosus-1a_M_contig87:441740..4422271696251030.3721247-UTR-E-siliculosus-1a_M_contig87:441740..442227Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig87 441741..442227 -
1622936333.629763-UTR-E-siliculosus-1a_M_contig87:447225..4472281622936333.629763-UTR-E-siliculosus-1a_M_contig87:447225..447228Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig87 447226..447228 -
1696251030.4945195-UTR-E-siliculosus-1a_M_contig87:447225..4472281696251030.4945195-UTR-E-siliculosus-1a_M_contig87:447225..447228Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig87 447226..447228 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936333.4400666-CDS-E-siliculosus-1a_M_contig87:442227..4423681622936333.4400666-CDS-E-siliculosus-1a_M_contig87:442227..442368Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 442228..442368 -
1696251030.386074-CDS-E-siliculosus-1a_M_contig87:442227..4423681696251030.386074-CDS-E-siliculosus-1a_M_contig87:442227..442368Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 442228..442368 -
1622936333.459934-CDS-E-siliculosus-1a_M_contig87:442589..4426741622936333.459934-CDS-E-siliculosus-1a_M_contig87:442589..442674Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 442590..442674 -
1696251030.397554-CDS-E-siliculosus-1a_M_contig87:442589..4426741696251030.397554-CDS-E-siliculosus-1a_M_contig87:442589..442674Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 442590..442674 -
1622936333.4723313-CDS-E-siliculosus-1a_M_contig87:443352..4435671622936333.4723313-CDS-E-siliculosus-1a_M_contig87:443352..443567Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 443353..443567 -
1696251030.412406-CDS-E-siliculosus-1a_M_contig87:443352..4435671696251030.412406-CDS-E-siliculosus-1a_M_contig87:443352..443567Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 443353..443567 -
1622936333.4917712-CDS-E-siliculosus-1a_M_contig87:444009..4441651622936333.4917712-CDS-E-siliculosus-1a_M_contig87:444009..444165Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 444010..444165 -
1696251030.4249933-CDS-E-siliculosus-1a_M_contig87:444009..4441651696251030.4249933-CDS-E-siliculosus-1a_M_contig87:444009..444165Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 444010..444165 -
1622936333.5269268-CDS-E-siliculosus-1a_M_contig87:444640..4447121622936333.5269268-CDS-E-siliculosus-1a_M_contig87:444640..444712Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 444641..444712 -
1696251030.4359028-CDS-E-siliculosus-1a_M_contig87:444640..4447121696251030.4359028-CDS-E-siliculosus-1a_M_contig87:444640..444712Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 444641..444712 -
1622936333.5506604-CDS-E-siliculosus-1a_M_contig87:445096..4453501622936333.5506604-CDS-E-siliculosus-1a_M_contig87:445096..445350Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 445097..445350 -
1696251030.4487376-CDS-E-siliculosus-1a_M_contig87:445096..4453501696251030.4487376-CDS-E-siliculosus-1a_M_contig87:445096..445350Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 445097..445350 -
1622936333.570658-CDS-E-siliculosus-1a_M_contig87:445661..4457701622936333.570658-CDS-E-siliculosus-1a_M_contig87:445661..445770Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 445662..445770 -
1696251030.4585376-CDS-E-siliculosus-1a_M_contig87:445661..4457701696251030.4585376-CDS-E-siliculosus-1a_M_contig87:445661..445770Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 445662..445770 -
1622936333.590292-CDS-E-siliculosus-1a_M_contig87:446064..4462831622936333.590292-CDS-E-siliculosus-1a_M_contig87:446064..446283Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 446065..446283 -
1696251030.4686806-CDS-E-siliculosus-1a_M_contig87:446064..4462831696251030.4686806-CDS-E-siliculosus-1a_M_contig87:446064..446283Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 446065..446283 -
1622936333.6140285-CDS-E-siliculosus-1a_M_contig87:446976..4472251622936333.6140285-CDS-E-siliculosus-1a_M_contig87:446976..447225Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 446977..447225 -
1696251030.4840612-CDS-E-siliculosus-1a_M_contig87:446976..4472251696251030.4840612-CDS-E-siliculosus-1a_M_contig87:446976..447225Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 446977..447225 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig87.16747.1prot_E-siliculosus-1a_M_contig87.16747.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig87 442228..447225 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig87.16747.1

>prot_E-siliculosus-1a_M_contig87.16747.1 ID=prot_E-siliculosus-1a_M_contig87.16747.1|Name=mRNA_E-siliculosus-1a_M_contig87.16747.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=500bp
MAAMQQKLRTSLAATLSDTGLLRSDGLINGKWVKAASGKLFPVNDPGTDT
KVASVSAFGEADAKLAVSAAEQSFDAWRSRTMQERGRVLSRWSELIGENS
NDLATIMCLESGKPKAESKGEVNYAMSFINMYAGMQTNGMVLPQQTDSHL
LMVTKEPVGVCALLTPWNFPAAMFTRKAAPALMAGCTIVLKPAEDTPLTA
LALAWLWERAGGPKGVVNVVPTPRELVQEVGNVLTTDEAVRKISFTGSTA
VGKHLLKQAAGTVKKTSMELGGNAPFVVFDDANLELAVNGAMTAKFRFGG
QVCIAPNRFLVQEGIYEAFVAKMAERIRALRVGDGLDSRTNMGPLINLAA
RDKVAGLVKDALDKGAEVVCGGQLEQHEMGNNFFAPTLLSGCTLDMRISQ
EEIFGPVVAVMKFKDADEALAISNSSRSGLAGYVYTQDYSRGMRFAGKLE
VGMVGMNESSISSCVVPFGGVKESGMGREGSVMGMDEFMEVKSICLGGI*
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mRNA from alignment at E-siliculosus-1a_M_contig87:441741..447228-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig87.16747.1 ID=mRNA_E-siliculosus-1a_M_contig87.16747.1|Name=mRNA_E-siliculosus-1a_M_contig87.16747.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5488bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig87:441741..447228- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
AATATGGCAGCTATGCAGCAGAAACTGAGGACATCGCTGGCGGCAACGCT TTCCGATACGGGGTTGCTCCGCTCGGACGGACTAATCAACGGGAAATGGG TGAAGGCCGCTTCAGGCAAACTGTTTCCAGTGAACGATCCAGGAACGGAC ACCAAGGTTGCATCTGTGTCTGCCTTCGGCGAGGCTGATGCAAAGCTAGC TGTCTCGGCGGCAGAGCAGAGCTTCGACGCTTGGCGCTCCAGGACTATGC AGGTGATGCCCTAGTGTGAGGGAAGTAAGGGGGGATCGACCCTTCGGCAG CTCCTATTATCTGTCTGTGCCAAACGTTGCCAAAGGCAGAGAATATCCAT GGTGCTCATGGTCGCATGTTCAATCCCCCCAATGACAGCGGTGGAGGGCG GCGTGCTGATCCACCTTCAAATCTGGCTGTCGTTTTGGGGCATCGATTGC CGTACGATAAGGTCATTGATGTCGGAGGGTGTTGATCAAGCACAGCATTA CAGCTTTGCACTGGAAGAAACATTTGCAGGCGTGCAGTACGACATGATAC GTGCGCAAACCCAGAACCAAGAAGTTGCGGCCTGTTGATTCGTCCGATCA TGTATTTGTCCGCCAATCAACCCCATCCGTTTCCGGCAGGCCATCTCCTT GTGTATTTGTTCAGCCGCTCATTCTATTTTGAAGAATACACAACACGAAG GAAGATTGTCCGTTCCAAGGGATGTATCGCAGTGTTTTCAGCAGCGAGGG TTGAGGGACACCCGCTGGATACTGGACTTGCTTGGAGTGCTACATAGCTG AGAAAGAGTAGCCCGACGTGCCTTGTTGTACAACCTGTTGCCCTCGTACG TAGACCTTTGTGCACCTCCAAGCTGCTTTCTTGCATCTCTCATGTGACTT GTCCGCACTTCTGCTGCATTGCCTCGCGTTTCCCTGAACGACTAGGAGCG GGGGAGGGTGCTATCTCGCTGGTCTGAGTTGATCGGCGAAAATTCGAACG ACTTGGCCACCATCATGTGTCTCGAGAGCGGCAAGCCGAAGGCAGAATCA AAGGGAGAAGTAAACTACGCCATGTCGTTCATAAACATGTACGCGGGGAT GCAGACGAACGGGATGGTCCTACCGCAGCAGACGGACAGTCATCTCCTCA TGGTCACGAAGGAGGTGGGTGACGTGTGCATAGCCCGAGCGACAACATCG AATGCATGTTTCTCACAGCAGCAGCAGCAGTTGCTCTGTTCCAGCAAAGT TGACGGATACGGAGGGGACTGCTGCTGCTTGCTTCAATACATCGCTGTCT GTGCACGGGTATTGATATTCAATACGGTTGCGTGTGTGCTCGTGGAGCTC TCGCTTCTTTTTCATGTTTTAAATTTCTTGACGCGATCTGTCATTCCTCC TTCGTTCCGTGTTGCTTCGTTCTCCGCAAAACATGCGCCGTCGCCACCCC TCATGAAGCCTGTGGGCGTGTGCGCCCTGCTTACTCCGTGGAACTTCCCG GCTGCGATGTTTACTCGGAAGGCAGCTCCAGCTCTCATGGCGGGGTGCAC CATCGTCCTCAAGCCAGGTTAGCTGGTGTAGAGCACGTGCGGCAAAGTTG TGTCAGTTTGCGCTTGTGTTGGGGAAGGACTGATGTTGAACAACGTGTCG TCGTCGTTATTGTTGCTGTCTTCACAAGCCATTATCATCTCTGTTCTCGC TGCCTTCAAGTACCCCGACTTTAGAACAGGGATAGAAATTGCGCGACAGA GAGATGTCTACTCTTGCTCAATACGCAAAACTGGCCACGTTGCACAGACA ACATTGTTTGTCTCTCGCGCTGTTCCCTACCCATCGTGTCTTCCCAATCC TTCTTGGTTCTCCTTATAAAACATGCAGCGGAAGACACCCCCCTCACCGC GCTTGCCCTGGCTTGGCTGTGGGAACGAGCCGGGGGGCCCAAGGGAGTGG TGAACGTCGTGCCCACCCCGCGGGAGCTGGTGCAGGAGGTCGGCAACGTT CTCACGACCGACGAAGCCGTCAGGAAGATCTCCTTCACGGGATCCACCGC GGTGGGAAAGCACCTGCTGAAGCAGGCCGCGGGCACGGTCAAGAAAACGT CCATGGAGCTGGGGGGCAACGCGCCCTTCGTGGTGAGAGCGTGCGTACTC AACACGTCTTTTTTCACCGGTTGCTTTACTTTTCCCGCAGAAAGCCCCAG GTGGCGGTGCAGTGAATGAGGGAGTGACGGCGAACTATGCCTCAGACCAC CGGTTGGAAACATCGTTCTTTCTGCCAAGCTTTCAAAATGTGTTTCCGAG CAAACCTGAGCCGTGGCGCGTACCTCGGTACAGCATATTGTGGTGTACTC TTCTCTGTGTCTTTTGGCACTGTCGGACTGCAGTACGAAGTAATGGAAGG AGAGCATGAAACCTTTACAACTCCACTAGATAAGTTTTCGTTATTGCTCA CTAAATAGCGAGGGTACGGAGATTCTCTTCCTAACCGCATCCTCCACGTG TCCGTTGCGTGCGCAGGTCTTCGATGACGCCAACCTTGAGCTGGCTGTAA ACGGTGCAATGACGGCGAAGTTCCGCTTCGGAGGCCAGGTCAGTTCTTTT GGAGCTCTACCACTAGGGACTGAGTCGCCCACCAAGCTCATCCCCAGAGT TCAACTGTAGTTTTTTTTCCAGCTCGGAACCCCAGTCTATTGGGTTCGTT GGCGTAGAATTTTTGCAGGGTGAAAGCAACTTCCCAGGTCGGCAACATCT CAGGCAGGTTGTTTGCAGCAGCGAGTAAGGCTGAGGGGCAACAAGAAGAT CCGAGGTGGAAAGGGGAGCGTGAGAGAATCGACATTAGCAGCTGGCGTGG AAAGTAACTGTAGGAGAGTGGTGGTGACAAGAGCGTATTTTGTTTGTGGA AACACCATATGCATATAACAAAGATCTAAACTCTTCGCAACAGACACACA ATCGTCACTCAGTAGATAGCGTTAGTCAGCAGTTCTACCTTTCTTTGCGA GCAACCCGAACCTGTGGTGCATCCCGTCGCCTCGCCTCTCCTCTCCCCAC TGTTTGCCGAAAGGTTTGTATAGCCCCAAACAGGTTTCTGGTGCAGGAGG GAATCTACGAAGCTTTCGTCGCTAAGATGGCGGAGCGGATCAGGGCTCTT CGCGTCGGAGACGGACTCGACTCTCGCACCAACATGGGGCCCCTGATCAA CCTCGCGGCGAGAGACAAGGTAGGATCGACACGTCAGACAAGAAACATGA GGTTTGCGTGAGGGGGGACAAGCATGACAGAAGACCCCCTTGGCAAGGAA CGGACGTTTCTGGGAAGTCTTCCGCGTGCTTTGTTTTCTTGCATGGTCGA GAGGCCTGGTGTCGACCCGACCTGTTTATGGGGTTGGTTTCACCTTGTCG TTGTTGTCGAACGGCGTACCCCAGATGCGCGACGGTCAAGGTTGGTTTCC TGGCCCAGTTTTTGCTGCCCATGGGATCCCCTTGTAGTTCTTGTTGAGGA GGAAATGTTACGACAGCAGTGACTGCTCACCTGGCTGCAGTTCTCAACCA TCGCCGATGACCCCCCCCGGGCGCATTGCAAGGCCGAAAGGACGTTCATC ACCGCAACCCCGCTAGAGAGACTCACTCACAACGGTTGGACGGTGTTTGC GATTATTGCAGGTGGCAGGCTTGGTGAAGGATGCCCTCGACAAAGGAGCA GAGGTTGTCTGCGGGGGGCAGCTCGAGCAGCATGAAATGGGCAACAACTT CTTCGCACCGACGCTGCTAAGTGGCTGCACGCTGGACATGCGCATCAGCC AAGAGGAGATATTTGGGCCCGTGGTGGCCGTGATGAAGTTCAAAGACGCG GATGAGGCCCTCGCCATATCTAACAGGTATTGTGTGCCTAGACTCTATAT TGTATGGTCGGTCTGTCCTTCTCTCTCTCTGCCTCCAAGGGTTCGCGGCG TACCTCAAAGAGCTCCGAGGTCGTCTGTGTGATGTTCCAGTTGAAACAAG CAGGTACAATCACCGGGCAAAAGCCACGACGAACCGCTGGCATATTTGTT TGAAGCTTTTTCAACTGGTTGGAGCGTAACCTTGGGTTGCGGTGACAAAA GGCCTTTTTGAGTATGGGAGTGAACAGCTTTTCCGGCATATTGCGACAGC AAGCACCTGGCACAGAGATTCAAAGATGAGCAGTGCGACGGCAGTCGTTT TCCGCGTGTAGGCCTTTTGAGGGATCTGAATTTTCATTTACGAGTCAAGT AGACAGTTCCAAGGATCAATCACGACGTGCCGTTCGAGGGTTGGCGGGCG AGGCAATATTAGTGTAGCCTGTGTAAGGCTCGATTGATATCACGTGTGAT TTGACGGCAATCCCTGGCACACCACGAACAAGCGAGATGGCCACACAGAG TATGTTGCTGAATGCCAACGTCGCTTGCAAGATGTGCGAGCACCAGGCCA GCGTTGTAGAATGTCGGCCTCGTAGATGCCCCCACCTGGCATGAATGCCA ACTGCTCAGCTGCTGTCCCCAACATACGTACGTCCGTTGCCAAACCTCTC GCAGCTCGCGTAGCGGATTGGCCGGGTACGTGTACACGCAGGACTACTCC AGGGGGATGCGATTCGCGGGAAAACTGGAAGTCGGAATGGTACGTGCTGC GTCAAAGAATCAGTGCCCGAGCTGGCTTCGTGCACGGCAGCTGTAGATCC CTCCGCGAGAAGGGCTATCGTCGTCTCTGTTTCTCGCTCGAGGCGCTTTA CTCCGCGTACCATCAACTGCGCCGTTTCGCACGAAAACATTGTCCATCTA ATGCCAACTCCGTGCAACATCTGCTACCACCTGCTGTGTAACTAACGATC GTCTTTGCAGGTCGGAATGAACGAAAGCTCTATCTCGAGCTGCGTGGTCC CTTTCGGGGGGGTAAAGGAGAGCGGGATGGGCAGGGAAGGGTCCGTGATG GGCATGGATGAGTTCATGGAGGTCAAATCAATCTGCCTTGGCGGAATATG AGTTTTTGACCTCTCGCACGACTGACGACTGCGAACGACTGTCAATTTTG GTGTAAATTCGATGTAGCTTCGTCCCCAAGATGAGCTTCCACGTAAATTG TACGTTCCTTACTGTACTATTTAGGTATGTGCTTGTTTTCCACGGTGGGG TGGGGCATGTGAACAGATGTGTCGTGTATGCCAAGGGGTGTCACCCTAGT GAGGGTTGTGTATGACGAGGAAACCTGCAGAGCGGCGAGATCTTTCACTC GTGCAGAGGACAGCGAGCTCGGTTAAATGCAGTGAGAGATTGCGGCAAAC GAGGAGAACGGTGAACGGTGTGATAACCGCGAGAAGAAAAAAATGGATAG TCGGGAGGCGACAAAGGGTGGAATGGTGCCCCGGAGATCTGTAGAGAAGC AAGAGTGCTAGTTGCCGTGGGTGTACATATGTTTGTCTTCGCTGCAGTGA GGCAGGCCTCCAAATAATCACGAGTACACGGATCCCAC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig87:441741..447228-

>mRNA_E-siliculosus-1a_M_contig87.16747.1 ID=mRNA_E-siliculosus-1a_M_contig87.16747.1|Name=mRNA_E-siliculosus-1a_M_contig87.16747.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=3000bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig87:441741..447228- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGCAGCTATGCAGCAGAAACTGAGGACATCGCTGGCGGCAACGCTTTC
CGATACGGGGTTGCTCCGCTCGGACGGACTAATCAACGGGAAATGGGTGA
AGGCCGCTTCAGGCAAACTGTTTCCAGTGAACGATCCAGGAACGGACACC
AAGGTTGCATCTGTGTCTGCCTTCGGCGAGGCTGATGCAAAGCTAGCTGT
CTCGGCGGCAGAGCAGAGCTTCGACGCTTGGCGCTCCAGGACTATGCAGA
TGGCAGCTATGCAGCAGAAACTGAGGACATCGCTGGCGGCAACGCTTTCC
GATACGGGGTTGCTCCGCTCGGACGGACTAATCAACGGGAAATGGGTGAA
GGCCGCTTCAGGCAAACTGTTTCCAGTGAACGATCCAGGAACGGACACCA
AGGTTGCATCTGTGTCTGCCTTCGGCGAGGCTGATGCAAAGCTAGCTGTC
TCGGCGGCAGAGCAGAGCTTCGACGCTTGGCGCTCCAGGACTATGCAGGA
GCGGGGGAGGGTGCTATCTCGCTGGTCTGAGTTGATCGGCGAAAATTCGA
ACGACTTGGCCACCATCATGTGTCTCGAGAGCGGCAAGCCGAAGGCAGAA
TCAAAGGGAGAAGTAAACTACGCCATGTCGTTCATAAACATGTACGCGGG
GATGCAGACGAACGGGATGGTCCTACCGCAGCAGACGGACAGTCATCTCC
TCATGGTCACGAAGGAGGAGCGGGGGAGGGTGCTATCTCGCTGGTCTGAG
TTGATCGGCGAAAATTCGAACGACTTGGCCACCATCATGTGTCTCGAGAG
CGGCAAGCCGAAGGCAGAATCAAAGGGAGAAGTAAACTACGCCATGTCGT
TCATAAACATGTACGCGGGGATGCAGACGAACGGGATGGTCCTACCGCAG
CAGACGGACAGTCATCTCCTCATGGTCACGAAGGAGCCTGTGGGCGTGTG
CGCCCTGCTTACTCCGTGGAACTTCCCGGCTGCGATGTTTACTCGGAAGG
CAGCTCCAGCTCTCATGGCGGGGTGCACCATCGTCCTCAAGCCAGCCTGT
GGGCGTGTGCGCCCTGCTTACTCCGTGGAACTTCCCGGCTGCGATGTTTA
CTCGGAAGGCAGCTCCAGCTCTCATGGCGGGGTGCACCATCGTCCTCAAG
CCAGCGGAAGACACCCCCCTCACCGCGCTTGCCCTGGCTTGGCTGTGGGA
ACGAGCCGGGGGGCCCAAGGGAGTGGTGAACGTCGTGCCCACCCCGCGGG
AGCTGGTGCAGGAGGTCGGCAACGTTCTCACGACCGACGAAGCCGTCAGG
AAGATCTCCTTCACGGGATCCACCGCGGTGGGAAAGCACCTGCTGAAGCA
GGCCGCGGGCACGGTCAAGAAAACGTCCATGGAGCTGGGGGGCAACGCGC
CCTTCGTGCGGAAGACACCCCCCTCACCGCGCTTGCCCTGGCTTGGCTGT
GGGAACGAGCCGGGGGGCCCAAGGGAGTGGTGAACGTCGTGCCCACCCCG
CGGGAGCTGGTGCAGGAGGTCGGCAACGTTCTCACGACCGACGAAGCCGT
CAGGAAGATCTCCTTCACGGGATCCACCGCGGTGGGAAAGCACCTGCTGA
AGCAGGCCGCGGGCACGGTCAAGAAAACGTCCATGGAGCTGGGGGGCAAC
GCGCCCTTCGTGGTCTTCGATGACGCCAACCTTGAGCTGGCTGTAAACGG
TGCAATGACGGCGAAGTTCCGCTTCGGAGGCCAGGTCTTCGATGACGCCA
ACCTTGAGCTGGCTGTAAACGGTGCAATGACGGCGAAGTTCCGCTTCGGA
GGCCAGGTTTGTATAGCCCCAAACAGGTTTCTGGTGCAGGAGGGAATCTA
CGAAGCTTTCGTCGCTAAGATGGCGGAGCGGATCAGGGCTCTTCGCGTCG
GAGACGGACTCGACTCTCGCACCAACATGGGGCCCCTGATCAACCTCGCG
GCGAGAGACAAGGTTTGTATAGCCCCAAACAGGTTTCTGGTGCAGGAGGG
AATCTACGAAGCTTTCGTCGCTAAGATGGCGGAGCGGATCAGGGCTCTTC
GCGTCGGAGACGGACTCGACTCTCGCACCAACATGGGGCCCCTGATCAAC
CTCGCGGCGAGAGACAAGGTGGCAGGCTTGGTGAAGGATGCCCTCGACAA
AGGAGCAGAGGTTGTCTGCGGGGGGCAGCTCGAGCAGCATGAAATGGGCA
ACAACTTCTTCGCACCGACGCTGCTAAGTGGCTGCACGCTGGACATGCGC
ATCAGCCAAGAGGAGATATTTGGGCCCGTGGTGGCCGTGATGAAGTTCAA
AGACGCGGATGAGGCCCTCGCCATATCTAACAGGTGGCAGGCTTGGTGAA
GGATGCCCTCGACAAAGGAGCAGAGGTTGTCTGCGGGGGGCAGCTCGAGC
AGCATGAAATGGGCAACAACTTCTTCGCACCGACGCTGCTAAGTGGCTGC
ACGCTGGACATGCGCATCAGCCAAGAGGAGATATTTGGGCCCGTGGTGGC
CGTGATGAAGTTCAAAGACGCGGATGAGGCCCTCGCCATATCTAACAGCT
CGCGTAGCGGATTGGCCGGGTACGTGTACACGCAGGACTACTCCAGGGGG
ATGCGATTCGCGGGAAAACTGGAAGTCGGAATGCTCGCGTAGCGGATTGG
CCGGGTACGTGTACACGCAGGACTACTCCAGGGGGATGCGATTCGCGGGA
AAACTGGAAGTCGGAATGGTCGGAATGAACGAAAGCTCTATCTCGAGCTG
CGTGGTCCCTTTCGGGGGGGTAAAGGAGAGCGGGATGGGCAGGGAAGGGT
CCGTGATGGGCATGGATGAGTTCATGGAGGTCAAATCAATCTGCCTTGGC
GGAATATGAGTCGGAATGAACGAAAGCTCTATCTCGAGCTGCGTGGTCCC
TTTCGGGGGGGTAAAGGAGAGCGGGATGGGCAGGGAAGGGTCCGTGATGG
GCATGGATGAGTTCATGGAGGTCAAATCAATCTGCCTTGGCGGAATATGA
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