mRNA_E-siliculosus-1a_M_contig87.16739.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig87.16739.1 vs. uniprot
Match: D7FW43_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW43_ECTSI) HSP 1 Score: 159 bits (401), Expect = 2.000e-49 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1
Query: 1 MAENKPKNVPSEFKISEKWDVCLERTVINFGAGVVAAGLAGVVLTRSPGMRRAVMGFGAGCGVGSSWVICSQDFAKK 231
MAENKPKNVPSEFKISEKWDVCLERTVINFGAGVVAAGLAGVVLTRSPGMRRAVMGFGAGCGVGSSWVICSQDFAKK
Sbjct: 1 MAENKPKNVPSEFKISEKWDVCLERTVINFGAGVVAAGLAGVVLTRSPGMRRAVMGFGAGCGVGSSWVICSQDFAKK 77
BLAST of mRNA_E-siliculosus-1a_M_contig87.16739.1 vs. uniprot
Match: A0A835YM07_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM07_9STRA) HSP 1 Score: 106 bits (265), Expect = 1.410e-28 Identity = 49/71 (69.01%), Postives = 58/71 (81.69%), Query Frame = 1
Query: 16 PKNVPSEFKISEKWDVCLERTVINFGAGVVAAGLAGVVLTRSPGMRRAVMGFGAGCGVGSSWVICSQDFAK 228
PK VPSE ISE+WD CLERT+INFG G++ GL+ VVLTRSPG +RA+MGFGAG GVG+SWV CSQ F +
Sbjct: 11 PKKVPSEMLISEQWDECLERTLINFGTGLLVGGLSAVVLTRSPGAKRALMGFGAGAGVGASWVHCSQAFER 81
BLAST of mRNA_E-siliculosus-1a_M_contig87.16739.1 vs. uniprot
Match: A0A1W0A8T9_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8T9_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 8.920e-20 Identity = 40/77 (51.95%), Postives = 53/77 (68.83%), Query Frame = 1
Query: 1 MAENKPKNVPSEFKISEKWDVCLERTVINFGAGVVAAGLAGVVLTRSPGMRRAVMGFGAGCGVGSSWVICSQDFAKK 231
MAE K ++PSE++ISEKWD C+E V+NF AG+VA GL +VL R+ R A+ GFGAG G G++W CS F +
Sbjct: 1 MAEKKT-SIPSEYRISEKWDKCIESFVVNFSAGLVAGGLTSLVLARTGSGRAALTGFGAGTGAGATWTTCSLAFEES 76
BLAST of mRNA_E-siliculosus-1a_M_contig87.16739.1 vs. uniprot
Match: K8Z5X9_NANGC (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z5X9_NANGC) HSP 1 Score: 83.2 bits (204), Expect = 2.840e-19 Identity = 40/69 (57.97%), Postives = 47/69 (68.12%), Query Frame = 1
Query: 25 VPSEFKISEKWDVCLERTVINFGAGVVAAGLAGVVLTRSPGMRRAVMGFGAGCGVGSSWVICSQDFAKK 231
VPSE ISEKWD CLERTV+N +G V L+G VL R+ R V G GCGVG+SWV C+QDF +K
Sbjct: 15 VPSELYISEKWDKCLERTVVNVASGAVLGLLSGFVLARTGHGRSLVAAVGVGCGVGASWVRCAQDFEEK 83
BLAST of mRNA_E-siliculosus-1a_M_contig87.16739.1 vs. uniprot
Match: A0A6G0XW05_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XW05_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 4.620e-19 Identity = 37/73 (50.68%), Postives = 50/73 (68.49%), Query Frame = 1
Query: 13 KPKNVPSEFKISEKWDVCLERTVINFGAGVVAAGLAGVVLTRSPGMRRAVMGFGAGCGVGSSWVICSQDFAKK 231
K + PSE++ISEKWD C+E V+NF AG+VA G+ +VL RS R + GFGAG GVG++W CS F ++
Sbjct: 15 KEQRTPSEYRISEKWDKCVESFVVNFSAGLVAGGITSLVLARSGAGRAGLTGFGAGAGVGATWTTCSLAFQEE 87
BLAST of mRNA_E-siliculosus-1a_M_contig87.16739.1 vs. uniprot
Match: A0A485KPZ2_9STRA (Aste57867_10077 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KPZ2_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 5.010e-19 Identity = 37/72 (51.39%), Postives = 49/72 (68.06%), Query Frame = 1
Query: 16 PKNVPSEFKISEKWDVCLERTVINFGAGVVAAGLAGVVLTRSPGMRRAVMGFGAGCGVGSSWVICSQDFAKK 231
P PSE++ISEKWD C+E V+NF AG+V G++ +VL RS R V GFGAG GVG++W CS F ++
Sbjct: 32 PSTTPSEYRISEKWDKCVESFVVNFSAGLVVGGISSLVLARSGAGRGLVTGFGAGAGVGATWTTCSLAFEEE 103
BLAST of mRNA_E-siliculosus-1a_M_contig87.16739.1 vs. uniprot
Match: W4H665_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H665_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 6.920e-19 Identity = 37/73 (50.68%), Postives = 50/73 (68.49%), Query Frame = 1
Query: 13 KPKNVPSEFKISEKWDVCLERTVINFGAGVVAAGLAGVVLTRSPGMRRAVMGFGAGCGVGSSWVICSQDFAKK 231
K PSE++ISEKWD C+E V+NF AG+VA G+ +VL R+ R A+ GFGAG GVG++W CS F ++
Sbjct: 30 KDSTTPSEYRISEKWDKCVESFVVNFSAGLVAGGVTSLVLARTSAGRAALTGFGAGAGVGATWTTCSLAFEEE 102
BLAST of mRNA_E-siliculosus-1a_M_contig87.16739.1 vs. uniprot
Match: A0A8K1CHY9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHY9_PYTOL) HSP 1 Score: 82.4 bits (202), Expect = 9.060e-19 Identity = 36/68 (52.94%), Postives = 46/68 (67.65%), Query Frame = 1
Query: 19 KNVPSEFKISEKWDVCLERTVINFGAGVVAAGLAGVVLTRSPGMRRAVMGFGAGCGVGSSWVICSQDF 222
K +PSE++ISEKWD C+E ++F AG+VA GL +VL R+ G R + GFGAG G GSSW C F
Sbjct: 9 KEIPSEYRISEKWDKCIENFALHFSAGLVAGGLTSIVLARTGGARGVLTGFGAGAGAGSSWTTCQLAF 76
BLAST of mRNA_E-siliculosus-1a_M_contig87.16739.1 vs. uniprot
Match: K3X912_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X912_GLOUD) HSP 1 Score: 82.0 bits (201), Expect = 1.150e-18 Identity = 41/74 (55.41%), Postives = 49/74 (66.22%), Query Frame = 1
Query: 1 MAENKPKNVPSEFKISEKWDVCLERTVINFGAGVVAAGLAGVVLTRSPGMRRAVMGFGAGCGVGSSWVICSQDF 222
M++NK NVPSEF+ISEKWD C+E ++F AG+VA GL VVL RS R + GFGAG GSSW C F
Sbjct: 1 MSDNK--NVPSEFRISEKWDKCIENFTLHFAAGLVAGGLTSVVLARSGAGRGVLTGFGAGXXAGSSWTTCQLAF 72
BLAST of mRNA_E-siliculosus-1a_M_contig87.16739.1 vs. uniprot
Match: A0A3M6VCD6_9STRA (Uncharacterized protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A3M6VCD6_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 1.220e-18 Identity = 40/75 (53.33%), Postives = 49/75 (65.33%), Query Frame = 1
Query: 1 MAENKPKNVPSEFKISEKWDVCLERTVINFGAGVVAAGLAGVVLTRSPGMRRAVMGFGAGCGVGSSWVICSQDFA 225
M++NK +PSE++ISEKWD CLE + FGAG+VA GL +VL RS R + G GAG G GSSW C FA
Sbjct: 1 MSDNK--EIPSEYRISEKWDKCLENFTLYFGAGLVAGGLTSLVLARSGAGRGLITGLGAGTGAGSSWTTCQMAFA 73 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig87.16739.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig87.16739.1 >prot_E-siliculosus-1a_M_contig87.16739.1 ID=prot_E-siliculosus-1a_M_contig87.16739.1|Name=mRNA_E-siliculosus-1a_M_contig87.16739.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=78bp MAENKPKNVPSEFKISEKWDVCLERTVINFGAGVVAAGLAGVVLTRSPGMback to top mRNA from alignment at E-siliculosus-1a_M_contig87:383045..387172+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig87.16739.1 ID=mRNA_E-siliculosus-1a_M_contig87.16739.1|Name=mRNA_E-siliculosus-1a_M_contig87.16739.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=4128bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig87:383045..387172+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig87:383045..387172+ >mRNA_E-siliculosus-1a_M_contig87.16739.1 ID=mRNA_E-siliculosus-1a_M_contig87.16739.1|Name=mRNA_E-siliculosus-1a_M_contig87.16739.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=468bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig87:383045..387172+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |