mRNA_E-siliculosus-1a_M_contig87.16735.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig87.16735.1 vs. uniprot
Match: D7FW49_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW49_ECTSI) HSP 1 Score: 1172 bits (3033), Expect = 0.000e+0 Identity = 661/672 (98.36%), Postives = 663/672 (98.66%), Query Frame = 3
Query: 738 MSENGGDKRQRKDDDGVRGGNEVDTERGSKRQKGGGNGAGKGEYTHAVHLRGLPWNASTKELVNFFAPMDVEHGDIHLVHNSRGEAYVKLKNESDLETALKKDRNTIGRRYIEVFRSSIEDVEHALDDVSSKGHGDGGYKGVVRMRGLPWSANEGDIRNFFDGIAIEKDGIHVTLNRDGRPSGEAYVVFETEEAAKEALKRDKDKIGERWIDIFEATKGEVYSMTGGGGKKGDQGGVSFDTTDSAYTGVVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTRPDGKASGEAFVLFATEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVGVGVKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTVLGMERGGAMYGREPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGASGTAANGGNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGXYGQYXXXXXXXXXXHRPSPGGYASYGVRAGGXXXXXXXXXXXXXXXXXXXXXXXVVGGPVPMGGYAQMAGGQQFGGYHRDRRDDRRDFR 2753
MSENGGDKRQRKDDDGVRGGNEVDTERGSKRQKGGGNGAGKGEYTHAVHLRGLPWNASTKELV+FFAPMDVE GDIHLVHNSRGEAYVKLKNESDLETALKKDRNTIGRRYIEVFRSSIEDVEHALDDVSSKGHGDGGYKGVVRMRGLPWSANEGDIRNFFDGIAIEKDGIHVTLNRDGRPSGEAYVVFETEEAAKEALKRDKDKIGERWIDIFEATKGEVYSMTGGGGKKGDQGGVSFDTTDSAYTGVVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTRPDGKASGEAFVLF+TEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVGVGVKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTVLGMERGGAMYGREPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGASGTAANGGNR XXXXXXXXXXXXXXXXXXXXXXXXXXXXX Y XY QYXXXXXXX HRPSPGGYASYGVRAGGXXXXXXXXXXXXXXXXXXXXXXXVVGGPVPMGGYAQMAGGQQFGGYHRDRRDDRRDFR
Sbjct: 1 MSENGGDKRQRKDDDGVRGGNEVDTERGSKRQKGGGNGAGKGEYTHAVHLRGLPWNASTKELVDFFAPMDVEDGDIHLVHNSRGEAYVKLKNESDLETALKKDRNTIGRRYIEVFRSSIEDVEHALDDVSSKGHGDGGYKGVVRMRGLPWSANEGDIRNFFDGIAIEKDGIHVTLNRDGRPSGEAYVVFETEEAAKEALKRDKDKIGERWIDIFEATKGEVYSMTGGGGKKGDQGGVSFDTTDSAYTGVVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTRPDGKASGEAFVLFSTEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVGVGVKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTVLGMERGGAMYGREPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGASGTAANGGNRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--YXXYXQYXXXXXXXVGGHRPSPGGYASYGVRAGGXXXXXXXXXXXXXXXXXXXXXXXVVGGPVPMGGYAQMAGGQQFGGYHRDRRDDRRDFR 670
BLAST of mRNA_E-siliculosus-1a_M_contig87.16735.1 vs. uniprot
Match: A0A835Z9Z3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Z3_9STRA) HSP 1 Score: 503 bits (1294), Expect = 1.020e-161 Identity = 269/573 (46.95%), Postives = 359/573 (62.65%), Query Frame = 3
Query: 867 YTHAVHLRGLPWNASTKELVNFFAPMDVEHGDIHLVHNSRGEAYVKLKNESDLETALKKDRNTIGRRYIEVFRSSIEDVEHALDDVSSKGHGDGGYKGVVRMRGLPWSANEGDIRNFFDGIAIEKDGIHVTLNRDGRPSGEAYVVFETEEAAKEALK-RDKDKIGERWIDIFEATKGEVYSMTGGGGK-KGDQGGVSFDTTDSAYTGVVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTRPDGKASGEAFVLFATEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVG-VGVKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEH-GVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRST----------VLGMERG--------GAMYGR------------------------------------------------------EPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGASG 2357
+TH V LRGLPWNA+ K++ +F +++ +++VHN+RGEAYVKL +E+ E +K DR T+GRRYIEVF +S ED+E +L+ K +G +GV+RMRGLPW+A E DI +FF G + G+H+ NR+GRPSGEAYVVF +E A EA + RDK+K+G RWID+FE+TKGE+Y+ TG + + + G D Y GV++MRGLPF+ATK+QI FF G V++S +FIV DG+ +G+AFV+F E +A+ AL DKEKLG RW+DLF + K A+Y+RVG V+MA++PDA +RGVLRMRGLP+++G +IR FF Y + + G+ V+ G D RP+GE+YV F +ED+A+ A L K+KIGDR+IELF+ TKGDLYTAT R + VL G GA+ G P TC KLRGLP+ VTE +IF FF GL VIG FICKD RPTGEGFVEF T+ C ++RNR M++RY+EVFA +K+DVLQ+I G
Sbjct: 152 FTHFVRLRGLPWNATVKDVTDFLRGIEISDEQVYIVHNTRGEAYVKLHSEASQEACIKCDRKTMGRRYIEVFPASAEDIEASLNVEQPKSSENGAVEGVLRMRGLPWTATEEDILSFFSGFDVRAGGVHIAKNREGRPSGEAYVVFHSELDAHEAKQQRDKEKMGGRWIDLFESTKGEMYANTGRSAEERWSEAGGERGAKDLDYRGVLKMRGLPFDATKAQIIDFFHGYGVEDSEVFIVMGRDGRPTGDAFVIFKDETDAKSALNLDKEKLGGRWVDLFPSTKAAVYERVGPTSVEMASRPDASYRGVLRMRGLPYSAGPAQIRDFFGDYAISKSDGIHVITGPDGRPSGEAYVEFANEDDAKHAL-GLHKEKIGDRYIELFQVTKGDLYTATTRPSYQPTHASATHVLARTMGYRGTGGGGGAVAGGYSGGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXMHALPPPAFGGSAGGTYPANGPPPTCAKLRGLPYQVTEQDIFDFFNGLDVIGIFICKDASGRPTGEGFVEFGTIQHCAQGLNRNRHYMLERYIEVFACTKDDVLQEISGQG 723
BLAST of mRNA_E-siliculosus-1a_M_contig87.16735.1 vs. uniprot
Match: A0A7S2SQA4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQA4_9STRA) HSP 1 Score: 451 bits (1160), Expect = 3.760e-144 Identity = 239/510 (46.86%), Postives = 324/510 (63.53%), Query Frame = 3
Query: 864 EYTHAVHLRGLPWNASTKELVNFFAP--MDVEHGDIHLVHNSRGEAYVKLKNESDLETALKKDRNTIGRRYIEVFRSSIEDVEHALDDVSSKGHGDGGYKGVVRMRGLPWSANEGDIRNFFDGIAIEKDGIHVTLNRDGRPSGEAYVVFETEEAAKEALKRDKDKIGERWIDIFEATKGEVYSMTGGGGKKGDQGGVSFDTTDSAYTGVVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTRPDGKASGEAFVLFATEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVGVGVKMAA-KPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTVLGMERGG---AMYGREPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGASGTAANGG 2375
++T AV LRGLPWN+ +V FF+ + + IHL+H GEA+V+ K ++ ++AL +R IG RY+EVF + D A ++G D ++GVVR+RGLP+SA +I FFD + +DG+H+++NR GRP+GEAYVVFETE+ ++A+K+DK ++G RW+DI+ +TKG +Y++ D+G D + VVRMRGLPF+A K I FF G + E I VT G+ SGEAFVLFATE EA +AL KDKEKL +RWIDLF ++K L RVGVG A KPDA R +++RGLPF++ V ++RTF G + EHGV+++NG D RPTG+ YV+F SEDEA RA A + + R +E+ + K DLY T+ + R G Y R PM C +LRGLPF V E +IF FF+G+ VIG F+CKD+ RPTGE FVEF D QLA+ RNRE + +RYVEVF +K DV+ +I GG
Sbjct: 20 DHTFAVKLRGLPWNSGKDTVVTFFSEGGLTIAPEAIHLLHTQTGEAFVRFKTAAEKDSALAMNRKNIGTRYVEVFFARASDAAAAARLSMARGQTDADFRGVVRLRGLPFSATAQEIIEFFDECKVAEDGVHISMNRGGRPTGEAYVVFETEDDVEKAVKKDKQRLGARWLDIYPSTKGAMYAVQNVVLADVDEG---VDVVFAEEVHVVRMRGLPFQAIKQNIMDFFAGFPLMEHRIIFVTDLLGRPSGEAFVLFATEDEATRALEKDKEKLSERWIDLFPSSKIELLDRVGVGAAAAVNKPDAAVRNCVKLRGLPFSADVNQVRTFLNGLSIAEHGVYILNGNDSRPTGDGYVVFASEDEAARA-AAYNGASLNGRAVEVVQCCKSDLYVDTISCPI--RSRPGDRNIFYSRTPMNCARLRGLPFRVEEKDIFQFFDGVKVIGIFMCKDMHGRPTGEAFVEFEHADGLQLALGRNREVLGERYVEVFPQAKADVVTRIQQFTAGVGGG 523
BLAST of mRNA_E-siliculosus-1a_M_contig87.16735.1 vs. uniprot
Match: A0A7S2XYI2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYI2_9STRA) HSP 1 Score: 419 bits (1077), Expect = 4.510e-135 Identity = 196/358 (54.75%), Postives = 271/358 (75.70%), Query Frame = 3
Query: 1275 RPSGEAYVVFETEEAAKEALKRDKDKIGERWIDIFEATKGEVYSMTGGGGKKGDQGGVSFDTTDSAYTGVVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTRPDGKASGEAFVLFATEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVGVGVKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTVLGMERGGAMYGREPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIG 2348
RPSG+A+VVF + E A++A+K+DK+++G RWID+F+ TK E+Y + G + D+ Y GV+RMRGLPFEA+K IR FF G + + NIF+V RPDGK SG+AFV+F +E +A+ AL DK+++G RW+DLF TNK LYQRVGV V+MA +PD+ ++GV++MRGLP++ GV +IR+F +KV+ HGV+++NG D RPTGE++ + +ED+A A LDK+++G+RW+E+F +K +LYTAT S ++GM+ A++G MTCVKLRGLPF V EN IF+FFEGL+VIG FIC+D+ R TGEGF EF+++++CQ AMSRNRE M+DRYVEVFA SK+DVL QIG
Sbjct: 1 RPSGDAFVVFCSVEHARKAMKKDKERMGNRWIDLFDTTKAELYGVQSTARGFGPAQ-IQQTEIDADYAGVIRMRGLPFEASKEDIRHFFSGYRIVDQNIFVVNRPDGKPSGDAFVIFGSEGDAKGALELDKKQMGSRWVDLFLTNKAELYQRVGVAVRMADRPDSNYKGVVKMRGLPYSVGVNDIRSFLSNFKVEPHGVYIINGPDGRPTGEAFTVMQTEDDAAAAKAKLDKERLGNRWVEMFVVSKAELYTATAHSPIVGMQGQNAVFGSTGMTCVKLRGLPFKVDENMIFTFFEGLSVIGIFICRDLGGRATGEGFCEFSSMEECQQAMSRNREVMVDRYVEVFACSKDDVLAQIG 357
BLAST of mRNA_E-siliculosus-1a_M_contig87.16735.1 vs. uniprot
Match: A0A7S3XQW7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQW7_HETAK) HSP 1 Score: 422 bits (1084), Expect = 2.150e-132 Identity = 231/519 (44.51%), Postives = 314/519 (60.50%), Query Frame = 3
Query: 873 HAVHLRGLPWNASTKELVNFFAPMDVEHGDIHLVHNSRGEAYVKLKNESDLETALKKDRNTIGRRYIEVFRSSIEDVEHALDDVS-SKGHGDGGYKGVVRMRGLPWSANEGDIRNFFDGIAIE--KDGIHVTLNRDGRPSGEAYVVFETEEAAKEALKRDKDKIGERWIDIFEATKGEVYSMTGG------------GGKKGDQGGVSFDTTDSAYTGVVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTRPDGKASGEAFVLFATEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVGVGVKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNGGD--WRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTVLGMERGGAMYGREPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIG-ASGTAANGG 2375
+AV LRGLPW+ S K+ + + V+ + L + GEA ++ + D + A +DR +G+RY+EVF ED + L+ ++ DG Y+GV+R+RGLPWSA+ D+ FF G+ +E + G+H +NR+GRPSGEAYVVF + AA+E L+RDK ++ RW+D+F ATK EVY+ G G+ +D +Y GV+R+RG+PFE TK QIR FF + ++FIV RPDG+ +G+AF +F +E +A A DK+K+G RW+DLF T K LYQR G V AA+PD E VLR+RGLPF +G +IR FFR Y EHGV+VV D P GE YV F D AERA ALD+Q + R++ELF T+GDLY T S VL M+ A+Y + MTCVK+ GLP V E+ IF FF G+ VIG FIC+D TGEGF EF + + Q SRN+ M DR V + +K+DV+++I G A GG
Sbjct: 121 YAVWLRGLPWDTS-KDAIKEWLGAGVKVTRVTLRPGNSGEALAEVASRGDQDAARARDRAHMGKRYVEVFPLESEDYKRQLEKFGYTESVTDGDYEGVLRVRGLPWSASAADVLEFFGGLEVEGGEKGVHFIINREGRPSGEAYVVFASAAAAREGLQRDKQRLKGRWLDLFGATKAEVYACENAHKAQAAAFAHAAGAAMPGVPGMEAMPSDGSYRGVLRLRGIPFEVTKDQIREFFGQWALNSRDVFIVKRPDGRVAGDAFAVFRSEEDARAAQALDKQKIGGRWVDLFPTTKAELYQRCGAAVHAAARPDCEAADVLRVRGLPFQAGPADIRDFFRDYPPVEHGVYVVPALDPLRPPPGEGYVQFADRDAAERARMALDRQSLFGRYLELFLVTRGDLYAGTTFSPVLSMQGPNAIYDIKGMTCVKMIGLPPTVDEDMIFKFFAGVKVIGIFICRDPSGNITGEGFAEFENLTEAQRGSSRNKAQMEDRAVTLLPCAKDDVVREISDPHGARARGG 638
BLAST of mRNA_E-siliculosus-1a_M_contig87.16735.1 vs. uniprot
Match: A0A4D9D6B4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6B4_9STRA) HSP 1 Score: 407 bits (1047), Expect = 4.990e-126 Identity = 225/547 (41.13%), Postives = 322/547 (58.87%), Query Frame = 3
Query: 879 VHLRGLPWNASTKELVNFFAPMDVEH-----GDIHLVHNSRGEAYVKLKNESDLETALKKDRNTIGRRYIEVFRSSIE---------------------DVEHALDDVSSKGHGDGGY------------KGVVRMRGLPWSANEGDIRNFFDGIAIEKDGIHVTLNRDGRPSGEAYVVFETEEAAKEALKRDKDKIGERWIDIFEATKGEV---------YSMTGGGGKKGDQGGVSFDTTDSAYTG----VVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTRPDGKASGEAFVLFATEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVGVG-VKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTVLGMERGGA-MYGREPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMM-----DRYVEVFATSKEDVLQQI 2345
+ L GLPW S ++ NF + V DI ++ +S GEA V++ + + ETALK +G+R++++ ++ E D A G G G +GVVRMRGLP+SA E DI FF G + G+H+ + GR SG+AYVVFET A+ ALK DK+KIGERWID+F ++K E+ Y GGGG+ ++GG G V+R+RGLPF+ T+ ++ FF + + IF V R DG++SGEAFV+ ++ +AL++DK+K+G RW+D+F ++ G L+ RVG V + AK D + GVL+MRGLPF + V ++ T+F Y+V GVF+ G D RPTGE+YV+F++ ++A A +AL+KQ + +RWI+L+ ++KGD+YT+TV S ++G GG +Y PMTC +LRG+P VTE +F FF GL VIG +IC+D R TGE + EF ++DDCQ AMSRNR+ M DR +EV A SKE+VLQ I
Sbjct: 91 LRLSGLPWKCSVADVQNFLKHIGVSTRPDPAADIKILDDSSGEALVRVGSAEEEETALKLKVGRLGKRFVDIGSTTEEAFEATPATSEEAMNAPATVVPDAATATTATGEAGDGTTGEASSLTVPESSTPQGVVRMRGLPYSATEKDILAFFSGFGVADGGVHMHYDHMGRASGQAYVVFETVPEAQHALKLDKEKIGERWIDLFLSSKPEMLHAVPSMRGYGPPGGGGEGWEEGGGIRPGPKGVSIGGISHVIRVRGLPFDCTRMDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPQGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFVGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASKEEVLQLI 637
BLAST of mRNA_E-siliculosus-1a_M_contig87.16735.1 vs. uniprot
Match: K8Z4P9_NANGC (Rna binding protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z4P9_NANGC) HSP 1 Score: 363 bits (932), Expect = 2.340e-111 Identity = 206/526 (39.16%), Postives = 298/526 (56.65%), Query Frame = 3
Query: 870 THAVHLRGLPWNASTKELVNFFAPMDVEH-----GDIHLVHNSRGEAYVKLKNESDLETALKKDRNTIGRRYIEV-------FRSSIEDVEHAL--------DDVSSKGH-GDGGY--------------KGVVRMRGLPWSANEGDIRNFFDGIAIEKDGIHVTLNRDGRPSGEAYVVFETEEAAKEALKRDKDKIGERWIDIFEATKGEVYSMTGGGGKKGDQGGVSFDTTDSAYTGVVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTRPDGKASGEAFVLFATEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVGVG-VKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTVLGMERGGA-MYGREPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMM-----DRYVEVFATS 2321
T + L GLPW S ++ NF + V DI ++ +S GEA V++ + + ETALK +G+R++++ F ++ E A+ D ++ G GDG +GVVRMRGLP+SA E DI FF G + + G+H+ + GR SG+AYVVFET A+ ALK DK+KIGERWID+F ++K E+ FF + + IF V R DG++SGEAFV+ ++ +AL++DK+K+G RW+D+F ++ G L+ RVG V + AK D + GVL+MRGLPF + V ++ T+F Y+V HGVF+ G D RPTGE+YV+F++ ++A A +AL+KQ + +RWI+L+ ++KGD+YT+TV S ++G GG +Y PMTC +LRG+P VTE +F FF GL VIG +IC+D R TGE + EF ++DDCQ AMSRNR+ M DR +EV A +
Sbjct: 88 TLILRLSGLPWKCSVADVQNFLKHIGVSTRPDPAADIKILDDSSGEALVRVGSAEEEETALKLKVGRLGKRFVDIGSTTEEAFEATPATSEEAMNAPATVVPDAATATGEAGDGTAGEASSLTVPESSTPQGVVRMRGLPYSATEKDILAFFSGFGVAEGGVHMHYDHMGRASGQAYVVFETVPEAQHALKLDKEKIGERWIDLFLSSKPEMLHAH-----------------------------------------FFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAAA 572
BLAST of mRNA_E-siliculosus-1a_M_contig87.16735.1 vs. uniprot
Match: W7TED5_9STRA (RNA binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TED5_9STRA) HSP 1 Score: 300 bits (767), Expect = 3.820e-89 Identity = 150/320 (46.88%), Postives = 214/320 (66.88%), Query Frame = 3
Query: 1407 MTGGGGKKGDQGGVSFDTTDSAYTGVVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTRPDGKASGEAFVLFATEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVGVG-VKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTVLGMERGGA-MYGREPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMM-----DRYVEVFATSKEDVLQQI 2345
M GGGG + GVS + V+R+RGLPF+ T+ ++ FF + + IF V R DG++SGEAFV+ ++ +AL++DK+K+G RW+D+F ++ G L+ RVG V + AK D + GVL+MRGLPF + V ++ T+F Y+V HGVF+ G D RPTGE+YV+F++ ++A A +AL+KQ + +RWI+L+ ++KGD+YT+TV S ++G GG +Y PMTC +LRG+P VTE +F FF GL VIG +IC+D R TGE + EF ++DDCQ AMSRNR+ M DR +EV A SKE+VLQ I
Sbjct: 1 MGGGGGIRPGPKGVSI----GGISHVIRVRGLPFDCTRMDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASKEEVLQLI 316
BLAST of mRNA_E-siliculosus-1a_M_contig87.16735.1 vs. uniprot
Match: A0A7R9U5K5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5K5_9STRA) HSP 1 Score: 288 bits (738), Expect = 2.240e-81 Identity = 196/602 (32.56%), Postives = 301/602 (50.00%), Query Frame = 3
Query: 879 VHLRGLPWNASTKELVNFFAPMDVEHGDIHLVHNSRGEAYVKLKNESDLETALKKDRNTIGRRYIEVFRSSIED--VEHALDDVSSKGHGDG------GYKGVVRMRGLPWSANEGDIRNFFDG---IAIEKDGIHVTLNRDGRPSGEAYVVFETE-EAAKEALKRDKDKIGERWIDIFEATKGEVYSMTGGGGKKGDQGGVSFDTTDSAYTGVVRMRGLPFEATKSQIRAFFDG-----INVKES-NIFIVTRPDGKASGEAFVLFATEAEAEKALLKDK---EKLGDRWIDLFATNKGALYQRVGVGVKMAAKP----DAEFRGV--------------LRMRGLPFASGVEEIRTFFRGYKV--QEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTV--------------------------------------------------------LGMERGGAMYG-------------------REPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMMDRYVEVFATSKEDVL 2336
V LRGLP++ + + + +FF + + + L+ N GEA+V+ + A DR IG RYIEV S+ + L +G+ +G Y GVVRMRGLPW++ E D+R+FFDG + + G+ + + DGR G AY VF++E EAA +D+ ++G R+I++F+ATKGE+ S + + V + G+++++GL + AT +QIR FF+G + KE ++ V PDG++SGEAF +F + A K ++DK ++L RW++L TN+ + V A++P A + G LRMRG+P+ + V++++ FF+GY++ HGV +V+ R GE+Y F+SE+EA RA +A+D+QK+G R++ELFR ++ ++ V +G GGA G R P+TC KLRGLPF+ T +IF+FF GL VIG+ + +D RPTGE F EF + + LA R+R M RYVEVF +KE+VL
Sbjct: 33 VRLRGLPYSTNPQGVRDFFDGLKIAEDGVWLLGNGAGEAFVRFEPGVSEADAKAFDRKYIGERYIEVMISTSSERLSRRELFKGDGRGNEEGDADDMPNYLGVVRMRGLPWTSTEADVRSFFDGCSGLRAGEKGVFICRHPDGRSKGMAYAVFDSEQEAAAAVSSKDRQQMGGRYIELFQATKGELNSQRNDATRGPSRPRVPPQLENE---GILKIKGLRWAATPAQIREFFNGHESAELEGKECLDVVPVVHPDGRSSGEAFAIFDSPTTAAK--MRDKLNGKELDGRWLNLILTNRQEMVHTVEYFGTSASQPFGGVHAGYGGAYNVFPGRSGGEMSALRMRGIPWTTSVQDVQVFFQGYRLLPMPHGVLLVSNASGRSAGEAYAAFESEEEASRAQQAMDRQKMGTRYVELFRCSRAEMNQIAEAGGVKPLGAGGVAMAQRGPAGPRLAGSVPYPTGAPGGYAYGVPYSHGTGGMPLAGNAAAGMGAGMGGAFSGHAAYENAPGFDGRAAPGPGRSPVTCCKLRGLPFSATHQDIFNFFSGLQVIGTLLVRDSAGRPTGEAFCEFNSPYEVTLAGMRHRAHMGSRYVEVFPCTKEEVL 629
BLAST of mRNA_E-siliculosus-1a_M_contig87.16735.1 vs. uniprot
Match: K8Z4G4_NANGC (Rna binding protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z4G4_NANGC) HSP 1 Score: 255 bits (651), Expect = 3.630e-74 Identity = 119/252 (47.22%), Postives = 175/252 (69.44%), Query Frame = 3
Query: 1527 IRAFFDGINVKESNIFIVTRPDGKASGEAFVLFATEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVGVG-VKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTVLGMERGGA-MYGREPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRN 2276
++ FF + + IF V R DG++SGEAFV+ ++ +AL++DK+K+G RW+D+F ++ G L+ RVG V + AK D + GVL+MRGLPF + V ++ T+F Y+V HGVF+ G D RPTGE+YV+F++ ++A A +AL+KQ + +RWI+L+ ++KGD+YT+TV S ++G GG +Y PMTC +LRG+P VTE +F FF GL VIG +IC+D R TGE + EF ++DDCQ AMSR+
Sbjct: 3 LQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRS 254 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig87.16735.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig87.16735.1 >prot_E-siliculosus-1a_M_contig87.16735.1 ID=prot_E-siliculosus-1a_M_contig87.16735.1|Name=mRNA_E-siliculosus-1a_M_contig87.16735.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=740bp MQIECPLSNPHLRARHLRKNQNLTRCQTFRLLDTKDQEDTGYRLGCPKLVback to top mRNA from alignment at E-siliculosus-1a_M_contig87:344949..352138- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig87.16735.1 ID=mRNA_E-siliculosus-1a_M_contig87.16735.1|Name=mRNA_E-siliculosus-1a_M_contig87.16735.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=7190bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig87:344949..352138- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig87:344949..352138- >mRNA_E-siliculosus-1a_M_contig87.16735.1 ID=mRNA_E-siliculosus-1a_M_contig87.16735.1|Name=mRNA_E-siliculosus-1a_M_contig87.16735.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=4440bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig87:344949..352138- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |