mRNA_E-siliculosus-1a_M_contig87.16735.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig87.16735.1
Unique NamemRNA_E-siliculosus-1a_M_contig87.16735.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig87.16735.1 vs. uniprot
Match: D7FW49_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW49_ECTSI)

HSP 1 Score: 1172 bits (3033), Expect = 0.000e+0
Identity = 661/672 (98.36%), Postives = 663/672 (98.66%), Query Frame = 3
Query:  738 MSENGGDKRQRKDDDGVRGGNEVDTERGSKRQKGGGNGAGKGEYTHAVHLRGLPWNASTKELVNFFAPMDVEHGDIHLVHNSRGEAYVKLKNESDLETALKKDRNTIGRRYIEVFRSSIEDVEHALDDVSSKGHGDGGYKGVVRMRGLPWSANEGDIRNFFDGIAIEKDGIHVTLNRDGRPSGEAYVVFETEEAAKEALKRDKDKIGERWIDIFEATKGEVYSMTGGGGKKGDQGGVSFDTTDSAYTGVVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTRPDGKASGEAFVLFATEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVGVGVKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTVLGMERGGAMYGREPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGASGTAANGGNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGXYGQYXXXXXXXXXXHRPSPGGYASYGVRAGGXXXXXXXXXXXXXXXXXXXXXXXVVGGPVPMGGYAQMAGGQQFGGYHRDRRDDRRDFR 2753
            MSENGGDKRQRKDDDGVRGGNEVDTERGSKRQKGGGNGAGKGEYTHAVHLRGLPWNASTKELV+FFAPMDVE GDIHLVHNSRGEAYVKLKNESDLETALKKDRNTIGRRYIEVFRSSIEDVEHALDDVSSKGHGDGGYKGVVRMRGLPWSANEGDIRNFFDGIAIEKDGIHVTLNRDGRPSGEAYVVFETEEAAKEALKRDKDKIGERWIDIFEATKGEVYSMTGGGGKKGDQGGVSFDTTDSAYTGVVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTRPDGKASGEAFVLF+TEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVGVGVKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTVLGMERGGAMYGREPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGASGTAANGGNR XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  Y XY QYXXXXXXX   HRPSPGGYASYGVRAGGXXXXXXXXXXXXXXXXXXXXXXXVVGGPVPMGGYAQMAGGQQFGGYHRDRRDDRRDFR
Sbjct:    1 MSENGGDKRQRKDDDGVRGGNEVDTERGSKRQKGGGNGAGKGEYTHAVHLRGLPWNASTKELVDFFAPMDVEDGDIHLVHNSRGEAYVKLKNESDLETALKKDRNTIGRRYIEVFRSSIEDVEHALDDVSSKGHGDGGYKGVVRMRGLPWSANEGDIRNFFDGIAIEKDGIHVTLNRDGRPSGEAYVVFETEEAAKEALKRDKDKIGERWIDIFEATKGEVYSMTGGGGKKGDQGGVSFDTTDSAYTGVVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTRPDGKASGEAFVLFSTEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVGVGVKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTVLGMERGGAMYGREPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGASGTAANGGNRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--YXXYXQYXXXXXXXVGGHRPSPGGYASYGVRAGGXXXXXXXXXXXXXXXXXXXXXXXVVGGPVPMGGYAQMAGGQQFGGYHRDRRDDRRDFR 670          
BLAST of mRNA_E-siliculosus-1a_M_contig87.16735.1 vs. uniprot
Match: A0A835Z9Z3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Z3_9STRA)

HSP 1 Score: 503 bits (1294), Expect = 1.020e-161
Identity = 269/573 (46.95%), Postives = 359/573 (62.65%), Query Frame = 3
Query:  867 YTHAVHLRGLPWNASTKELVNFFAPMDVEHGDIHLVHNSRGEAYVKLKNESDLETALKKDRNTIGRRYIEVFRSSIEDVEHALDDVSSKGHGDGGYKGVVRMRGLPWSANEGDIRNFFDGIAIEKDGIHVTLNRDGRPSGEAYVVFETEEAAKEALK-RDKDKIGERWIDIFEATKGEVYSMTGGGGK-KGDQGGVSFDTTDSAYTGVVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTRPDGKASGEAFVLFATEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVG-VGVKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEH-GVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRST----------VLGMERG--------GAMYGR------------------------------------------------------EPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGASG 2357
            +TH V LRGLPWNA+ K++ +F   +++    +++VHN+RGEAYVKL +E+  E  +K DR T+GRRYIEVF +S ED+E +L+    K   +G  +GV+RMRGLPW+A E DI +FF G  +   G+H+  NR+GRPSGEAYVVF +E  A EA + RDK+K+G RWID+FE+TKGE+Y+ TG   + +  + G      D  Y GV++MRGLPF+ATK+QI  FF G  V++S +FIV   DG+ +G+AFV+F  E +A+ AL  DKEKLG RW+DLF + K A+Y+RVG   V+MA++PDA +RGVLRMRGLP+++G  +IR FF  Y + +  G+ V+ G D RP+GE+YV F +ED+A+ A   L K+KIGDR+IELF+ TKGDLYTAT R +          VL    G        GA+ G                                                        P TC KLRGLP+ VTE +IF FF GL VIG FICKD   RPTGEGFVEF T+  C   ++RNR  M++RY+EVFA +K+DVLQ+I   G
Sbjct:  152 FTHFVRLRGLPWNATVKDVTDFLRGIEISDEQVYIVHNTRGEAYVKLHSEASQEACIKCDRKTMGRRYIEVFPASAEDIEASLNVEQPKSSENGAVEGVLRMRGLPWTATEEDILSFFSGFDVRAGGVHIAKNREGRPSGEAYVVFHSELDAHEAKQQRDKEKMGGRWIDLFESTKGEMYANTGRSAEERWSEAGGERGAKDLDYRGVLKMRGLPFDATKAQIIDFFHGYGVEDSEVFIVMGRDGRPTGDAFVIFKDETDAKSALNLDKEKLGGRWVDLFPSTKAAVYERVGPTSVEMASRPDASYRGVLRMRGLPYSAGPAQIRDFFGDYAISKSDGIHVITGPDGRPSGEAYVEFANEDDAKHAL-GLHKEKIGDRYIELFQVTKGDLYTATTRPSYQPTHASATHVLARTMGYRGTGGGGGAVAGGYSGGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXMHALPPPAFGGSAGGTYPANGPPPTCAKLRGLPYQVTEQDIFDFFNGLDVIGIFICKDASGRPTGEGFVEFGTIQHCAQGLNRNRHYMLERYIEVFACTKDDVLQEISGQG 723          
BLAST of mRNA_E-siliculosus-1a_M_contig87.16735.1 vs. uniprot
Match: A0A7S2SQA4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQA4_9STRA)

HSP 1 Score: 451 bits (1160), Expect = 3.760e-144
Identity = 239/510 (46.86%), Postives = 324/510 (63.53%), Query Frame = 3
Query:  864 EYTHAVHLRGLPWNASTKELVNFFAP--MDVEHGDIHLVHNSRGEAYVKLKNESDLETALKKDRNTIGRRYIEVFRSSIEDVEHALDDVSSKGHGDGGYKGVVRMRGLPWSANEGDIRNFFDGIAIEKDGIHVTLNRDGRPSGEAYVVFETEEAAKEALKRDKDKIGERWIDIFEATKGEVYSMTGGGGKKGDQGGVSFDTTDSAYTGVVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTRPDGKASGEAFVLFATEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVGVGVKMAA-KPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTVLGMERGG---AMYGREPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGASGTAANGG 2375
            ++T AV LRGLPWN+    +V FF+   + +    IHL+H   GEA+V+ K  ++ ++AL  +R  IG RY+EVF +   D   A     ++G  D  ++GVVR+RGLP+SA   +I  FFD   + +DG+H+++NR GRP+GEAYVVFETE+  ++A+K+DK ++G RW+DI+ +TKG +Y++        D+G    D   +    VVRMRGLPF+A K  I  FF G  + E  I  VT   G+ SGEAFVLFATE EA +AL KDKEKL +RWIDLF ++K  L  RVGVG   A  KPDA  R  +++RGLPF++ V ++RTF  G  + EHGV+++NG D RPTG+ YV+F SEDEA RA  A +   +  R +E+ +  K DLY  T+   +    R G     Y R PM C +LRGLPF V E +IF FF+G+ VIG F+CKD+  RPTGE FVEF   D  QLA+ RNRE + +RYVEVF  +K DV+ +I        GG
Sbjct:   20 DHTFAVKLRGLPWNSGKDTVVTFFSEGGLTIAPEAIHLLHTQTGEAFVRFKTAAEKDSALAMNRKNIGTRYVEVFFARASDAAAAARLSMARGQTDADFRGVVRLRGLPFSATAQEIIEFFDECKVAEDGVHISMNRGGRPTGEAYVVFETEDDVEKAVKKDKQRLGARWLDIYPSTKGAMYAVQNVVLADVDEG---VDVVFAEEVHVVRMRGLPFQAIKQNIMDFFAGFPLMEHRIIFVTDLLGRPSGEAFVLFATEDEATRALEKDKEKLSERWIDLFPSSKIELLDRVGVGAAAAVNKPDAAVRNCVKLRGLPFSADVNQVRTFLNGLSIAEHGVYILNGNDSRPTGDGYVVFASEDEAARA-AAYNGASLNGRAVEVVQCCKSDLYVDTISCPI--RSRPGDRNIFYSRTPMNCARLRGLPFRVEEKDIFQFFDGVKVIGIFMCKDMHGRPTGEAFVEFEHADGLQLALGRNREVLGERYVEVFPQAKADVVTRIQQFTAGVGGG 523          
BLAST of mRNA_E-siliculosus-1a_M_contig87.16735.1 vs. uniprot
Match: A0A7S2XYI2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYI2_9STRA)

HSP 1 Score: 419 bits (1077), Expect = 4.510e-135
Identity = 196/358 (54.75%), Postives = 271/358 (75.70%), Query Frame = 3
Query: 1275 RPSGEAYVVFETEEAAKEALKRDKDKIGERWIDIFEATKGEVYSMTGGGGKKGDQGGVSFDTTDSAYTGVVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTRPDGKASGEAFVLFATEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVGVGVKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTVLGMERGGAMYGREPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIG 2348
            RPSG+A+VVF + E A++A+K+DK+++G RWID+F+ TK E+Y +       G    +     D+ Y GV+RMRGLPFEA+K  IR FF G  + + NIF+V RPDGK SG+AFV+F +E +A+ AL  DK+++G RW+DLF TNK  LYQRVGV V+MA +PD+ ++GV++MRGLP++ GV +IR+F   +KV+ HGV+++NG D RPTGE++ +  +ED+A  A   LDK+++G+RW+E+F  +K +LYTAT  S ++GM+   A++G   MTCVKLRGLPF V EN IF+FFEGL+VIG FIC+D+  R TGEGF EF+++++CQ AMSRNRE M+DRYVEVFA SK+DVL QIG
Sbjct:    1 RPSGDAFVVFCSVEHARKAMKKDKERMGNRWIDLFDTTKAELYGVQSTARGFGPAQ-IQQTEIDADYAGVIRMRGLPFEASKEDIRHFFSGYRIVDQNIFVVNRPDGKPSGDAFVIFGSEGDAKGALELDKKQMGSRWVDLFLTNKAELYQRVGVAVRMADRPDSNYKGVVKMRGLPYSVGVNDIRSFLSNFKVEPHGVYIINGPDGRPTGEAFTVMQTEDDAAAAKAKLDKERLGNRWVEMFVVSKAELYTATAHSPIVGMQGQNAVFGSTGMTCVKLRGLPFKVDENMIFTFFEGLSVIGIFICRDLGGRATGEGFCEFSSMEECQQAMSRNREVMVDRYVEVFACSKDDVLAQIG 357          
BLAST of mRNA_E-siliculosus-1a_M_contig87.16735.1 vs. uniprot
Match: A0A7S3XQW7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQW7_HETAK)

HSP 1 Score: 422 bits (1084), Expect = 2.150e-132
Identity = 231/519 (44.51%), Postives = 314/519 (60.50%), Query Frame = 3
Query:  873 HAVHLRGLPWNASTKELVNFFAPMDVEHGDIHLVHNSRGEAYVKLKNESDLETALKKDRNTIGRRYIEVFRSSIEDVEHALDDVS-SKGHGDGGYKGVVRMRGLPWSANEGDIRNFFDGIAIE--KDGIHVTLNRDGRPSGEAYVVFETEEAAKEALKRDKDKIGERWIDIFEATKGEVYSMTGG------------GGKKGDQGGVSFDTTDSAYTGVVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTRPDGKASGEAFVLFATEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVGVGVKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNGGD--WRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTVLGMERGGAMYGREPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIG-ASGTAANGG 2375
            +AV LRGLPW+ S K+ +  +    V+   + L   + GEA  ++ +  D + A  +DR  +G+RY+EVF    ED +  L+    ++   DG Y+GV+R+RGLPWSA+  D+  FF G+ +E  + G+H  +NR+GRPSGEAYVVF +  AA+E L+RDK ++  RW+D+F ATK EVY+                G       G+    +D +Y GV+R+RG+PFE TK QIR FF    +   ++FIV RPDG+ +G+AF +F +E +A  A   DK+K+G RW+DLF T K  LYQR G  V  AA+PD E   VLR+RGLPF +G  +IR FFR Y   EHGV+VV   D    P GE YV F   D AERA  ALD+Q +  R++ELF  T+GDLY  T  S VL M+   A+Y  + MTCVK+ GLP  V E+ IF FF G+ VIG FIC+D     TGEGF EF  + + Q   SRN+  M DR V +   +K+DV+++I    G  A GG
Sbjct:  121 YAVWLRGLPWDTS-KDAIKEWLGAGVKVTRVTLRPGNSGEALAEVASRGDQDAARARDRAHMGKRYVEVFPLESEDYKRQLEKFGYTESVTDGDYEGVLRVRGLPWSASAADVLEFFGGLEVEGGEKGVHFIINREGRPSGEAYVVFASAAAAREGLQRDKQRLKGRWLDLFGATKAEVYACENAHKAQAAAFAHAAGAAMPGVPGMEAMPSDGSYRGVLRLRGIPFEVTKDQIREFFGQWALNSRDVFIVKRPDGRVAGDAFAVFRSEEDARAAQALDKQKIGGRWVDLFPTTKAELYQRCGAAVHAAARPDCEAADVLRVRGLPFQAGPADIRDFFRDYPPVEHGVYVVPALDPLRPPPGEGYVQFADRDAAERARMALDRQSLFGRYLELFLVTRGDLYAGTTFSPVLSMQGPNAIYDIKGMTCVKMIGLPPTVDEDMIFKFFAGVKVIGIFICRDPSGNITGEGFAEFENLTEAQRGSSRNKAQMEDRAVTLLPCAKDDVVREISDPHGARARGG 638          
BLAST of mRNA_E-siliculosus-1a_M_contig87.16735.1 vs. uniprot
Match: A0A4D9D6B4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6B4_9STRA)

HSP 1 Score: 407 bits (1047), Expect = 4.990e-126
Identity = 225/547 (41.13%), Postives = 322/547 (58.87%), Query Frame = 3
Query:  879 VHLRGLPWNASTKELVNFFAPMDVEH-----GDIHLVHNSRGEAYVKLKNESDLETALKKDRNTIGRRYIEVFRSSIE---------------------DVEHALDDVSSKGHGDGGY------------KGVVRMRGLPWSANEGDIRNFFDGIAIEKDGIHVTLNRDGRPSGEAYVVFETEEAAKEALKRDKDKIGERWIDIFEATKGEV---------YSMTGGGGKKGDQGGVSFDTTDSAYTG----VVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTRPDGKASGEAFVLFATEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVGVG-VKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTVLGMERGGA-MYGREPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMM-----DRYVEVFATSKEDVLQQI 2345
            + L GLPW  S  ++ NF   + V        DI ++ +S GEA V++ +  + ETALK     +G+R++++  ++ E                     D   A       G G  G             +GVVRMRGLP+SA E DI  FF G  +   G+H+  +  GR SG+AYVVFET   A+ ALK DK+KIGERWID+F ++K E+         Y   GGGG+  ++GG           G    V+R+RGLPF+ T+  ++ FF  +    + IF V R DG++SGEAFV+  ++    +AL++DK+K+G RW+D+F ++ G L+ RVG   V + AK D  + GVL+MRGLPF + V ++ T+F  Y+V   GVF+  G D RPTGE+YV+F++ ++A  A +AL+KQ + +RWI+L+ ++KGD+YT+TV S ++G   GG  +Y   PMTC +LRG+P  VTE  +F FF GL VIG +IC+D   R TGE + EF ++DDCQ AMSRNR+ M      DR +EV A SKE+VLQ I
Sbjct:   91 LRLSGLPWKCSVADVQNFLKHIGVSTRPDPAADIKILDDSSGEALVRVGSAEEEETALKLKVGRLGKRFVDIGSTTEEAFEATPATSEEAMNAPATVVPDAATATTATGEAGDGTTGEASSLTVPESSTPQGVVRMRGLPYSATEKDILAFFSGFGVADGGVHMHYDHMGRASGQAYVVFETVPEAQHALKLDKEKIGERWIDLFLSSKPEMLHAVPSMRGYGPPGGGGEGWEEGGGIRPGPKGVSIGGISHVIRVRGLPFDCTRMDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPQGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFVGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASKEEVLQLI 637          
BLAST of mRNA_E-siliculosus-1a_M_contig87.16735.1 vs. uniprot
Match: K8Z4P9_NANGC (Rna binding protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z4P9_NANGC)

HSP 1 Score: 363 bits (932), Expect = 2.340e-111
Identity = 206/526 (39.16%), Postives = 298/526 (56.65%), Query Frame = 3
Query:  870 THAVHLRGLPWNASTKELVNFFAPMDVEH-----GDIHLVHNSRGEAYVKLKNESDLETALKKDRNTIGRRYIEV-------FRSSIEDVEHAL--------DDVSSKGH-GDGGY--------------KGVVRMRGLPWSANEGDIRNFFDGIAIEKDGIHVTLNRDGRPSGEAYVVFETEEAAKEALKRDKDKIGERWIDIFEATKGEVYSMTGGGGKKGDQGGVSFDTTDSAYTGVVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTRPDGKASGEAFVLFATEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVGVG-VKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTVLGMERGGA-MYGREPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMM-----DRYVEVFATS 2321
            T  + L GLPW  S  ++ NF   + V        DI ++ +S GEA V++ +  + ETALK     +G+R++++       F ++    E A+        D  ++ G  GDG                +GVVRMRGLP+SA E DI  FF G  + + G+H+  +  GR SG+AYVVFET   A+ ALK DK+KIGERWID+F ++K E+                                             FF  +    + IF V R DG++SGEAFV+  ++    +AL++DK+K+G RW+D+F ++ G L+ RVG   V + AK D  + GVL+MRGLPF + V ++ T+F  Y+V  HGVF+  G D RPTGE+YV+F++ ++A  A +AL+KQ + +RWI+L+ ++KGD+YT+TV S ++G   GG  +Y   PMTC +LRG+P  VTE  +F FF GL VIG +IC+D   R TGE + EF ++DDCQ AMSRNR+ M      DR +EV A +
Sbjct:   88 TLILRLSGLPWKCSVADVQNFLKHIGVSTRPDPAADIKILDDSSGEALVRVGSAEEEETALKLKVGRLGKRFVDIGSTTEEAFEATPATSEEAMNAPATVVPDAATATGEAGDGTAGEASSLTVPESSTPQGVVRMRGLPYSATEKDILAFFSGFGVAEGGVHMHYDHMGRASGQAYVVFETVPEAQHALKLDKEKIGERWIDLFLSSKPEMLHAH-----------------------------------------FFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAAA 572          
BLAST of mRNA_E-siliculosus-1a_M_contig87.16735.1 vs. uniprot
Match: W7TED5_9STRA (RNA binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TED5_9STRA)

HSP 1 Score: 300 bits (767), Expect = 3.820e-89
Identity = 150/320 (46.88%), Postives = 214/320 (66.88%), Query Frame = 3
Query: 1407 MTGGGGKKGDQGGVSFDTTDSAYTGVVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTRPDGKASGEAFVLFATEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVGVG-VKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTVLGMERGGA-MYGREPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMM-----DRYVEVFATSKEDVLQQI 2345
            M GGGG +    GVS        + V+R+RGLPF+ T+  ++ FF  +    + IF V R DG++SGEAFV+  ++    +AL++DK+K+G RW+D+F ++ G L+ RVG   V + AK D  + GVL+MRGLPF + V ++ T+F  Y+V  HGVF+  G D RPTGE+YV+F++ ++A  A +AL+KQ + +RWI+L+ ++KGD+YT+TV S ++G   GG  +Y   PMTC +LRG+P  VTE  +F FF GL VIG +IC+D   R TGE + EF ++DDCQ AMSRNR+ M      DR +EV A SKE+VLQ I
Sbjct:    1 MGGGGGIRPGPKGVSI----GGISHVIRVRGLPFDCTRMDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASKEEVLQLI 316          
BLAST of mRNA_E-siliculosus-1a_M_contig87.16735.1 vs. uniprot
Match: A0A7R9U5K5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5K5_9STRA)

HSP 1 Score: 288 bits (738), Expect = 2.240e-81
Identity = 196/602 (32.56%), Postives = 301/602 (50.00%), Query Frame = 3
Query:  879 VHLRGLPWNASTKELVNFFAPMDVEHGDIHLVHNSRGEAYVKLKNESDLETALKKDRNTIGRRYIEVFRSSIED--VEHALDDVSSKGHGDG------GYKGVVRMRGLPWSANEGDIRNFFDG---IAIEKDGIHVTLNRDGRPSGEAYVVFETE-EAAKEALKRDKDKIGERWIDIFEATKGEVYSMTGGGGKKGDQGGVSFDTTDSAYTGVVRMRGLPFEATKSQIRAFFDG-----INVKES-NIFIVTRPDGKASGEAFVLFATEAEAEKALLKDK---EKLGDRWIDLFATNKGALYQRVGVGVKMAAKP----DAEFRGV--------------LRMRGLPFASGVEEIRTFFRGYKV--QEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTV--------------------------------------------------------LGMERGGAMYG-------------------REPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMMDRYVEVFATSKEDVL 2336
            V LRGLP++ + + + +FF  + +    + L+ N  GEA+V+ +       A   DR  IG RYIEV  S+  +      L     +G+ +G       Y GVVRMRGLPW++ E D+R+FFDG   +   + G+ +  + DGR  G AY VF++E EAA     +D+ ++G R+I++F+ATKGE+ S      +   +  V     +    G+++++GL + AT +QIR FF+G     +  KE  ++  V  PDG++SGEAF +F +   A K  ++DK   ++L  RW++L  TN+  +   V      A++P     A + G               LRMRG+P+ + V++++ FF+GY++    HGV +V+    R  GE+Y  F+SE+EA RA +A+D+QK+G R++ELFR ++ ++        V                                                        +G   GGA  G                   R P+TC KLRGLPF+ T  +IF+FF GL VIG+ + +D   RPTGE F EF +  +  LA  R+R  M  RYVEVF  +KE+VL
Sbjct:   33 VRLRGLPYSTNPQGVRDFFDGLKIAEDGVWLLGNGAGEAFVRFEPGVSEADAKAFDRKYIGERYIEVMISTSSERLSRRELFKGDGRGNEEGDADDMPNYLGVVRMRGLPWTSTEADVRSFFDGCSGLRAGEKGVFICRHPDGRSKGMAYAVFDSEQEAAAAVSSKDRQQMGGRYIELFQATKGELNSQRNDATRGPSRPRVPPQLENE---GILKIKGLRWAATPAQIREFFNGHESAELEGKECLDVVPVVHPDGRSSGEAFAIFDSPTTAAK--MRDKLNGKELDGRWLNLILTNRQEMVHTVEYFGTSASQPFGGVHAGYGGAYNVFPGRSGGEMSALRMRGIPWTTSVQDVQVFFQGYRLLPMPHGVLLVSNASGRSAGEAYAAFESEEEASRAQQAMDRQKMGTRYVELFRCSRAEMNQIAEAGGVKPLGAGGVAMAQRGPAGPRLAGSVPYPTGAPGGYAYGVPYSHGTGGMPLAGNAAAGMGAGMGGAFSGHAAYENAPGFDGRAAPGPGRSPVTCCKLRGLPFSATHQDIFNFFSGLQVIGTLLVRDSAGRPTGEAFCEFNSPYEVTLAGMRHRAHMGSRYVEVFPCTKEEVL 629          
BLAST of mRNA_E-siliculosus-1a_M_contig87.16735.1 vs. uniprot
Match: K8Z4G4_NANGC (Rna binding protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z4G4_NANGC)

HSP 1 Score: 255 bits (651), Expect = 3.630e-74
Identity = 119/252 (47.22%), Postives = 175/252 (69.44%), Query Frame = 3
Query: 1527 IRAFFDGINVKESNIFIVTRPDGKASGEAFVLFATEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVGVG-VKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTVLGMERGGA-MYGREPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRN 2276
            ++ FF  +    + IF V R DG++SGEAFV+  ++    +AL++DK+K+G RW+D+F ++ G L+ RVG   V + AK D  + GVL+MRGLPF + V ++ T+F  Y+V  HGVF+  G D RPTGE+YV+F++ ++A  A +AL+KQ + +RWI+L+ ++KGD+YT+TV S ++G   GG  +Y   PMTC +LRG+P  VTE  +F FF GL VIG +IC+D   R TGE + EF ++DDCQ AMSR+
Sbjct:    3 LQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRS 254          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig87.16735.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW49_ECTSI0.000e+098.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z9Z3_9STRA1.020e-16146.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SQA4_9STRA3.760e-14446.86Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2XYI2_9STRA4.510e-13554.75Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XQW7_HETAK2.150e-13244.51Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4D9D6B4_9STRA4.990e-12641.13Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
K8Z4P9_NANGC2.340e-11139.16Rna binding protein (Fragment) n=1 Tax=Nannochloro... [more]
W7TED5_9STRA3.820e-8946.88RNA binding protein n=1 Tax=Nannochloropsis gadita... [more]
A0A7R9U5K5_9STRA2.240e-8132.56Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
K8Z4G4_NANGC3.630e-7447.22Rna binding protein n=1 Tax=Nannochloropsis gadita... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig87contigE-siliculosus-1a_M_contig87:344949..352138 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size2220
Model size2756
Exons3
Ec32 orthologEc-01_003380.1
Ec32 ortholog descriptionRNA recognition motif domain
Hectar predicted targeting categoryother localisation
BRITEko00000,ko03041
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.J
EggNOG OGsKOG1365@1,KOG1365@2759,KOG4211@1,KOG4211@2759
EggNOG free text desc.regulation of RNA splicing
GOsGO:0000003,GO:0000375,GO:0000377,GO:0000398,GO:0000578,GO:0002009,GO:0003002,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0005886,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006403,GO:0006417,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0007028,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007308,GO:0007309,GO:0007310,GO:0007311,GO:0007314,GO:0007315,GO:0007316,GO:0007350,GO:0007351,GO:0007389,GO:0008134,GO:0008150,GO:0008152,GO:0008187,GO:0008266,GO:0008298,GO:0008358,GO:0008380,GO:0008543,GO:0008595,GO:0009295,GO:0009611,GO:0009653,GO:0009719,GO:0009790,GO:0009798,GO:0009880,GO:0009888,GO:0009889,GO:0009948,GO:0009950,GO:0009952,GO:0009953,GO:0009987,GO:0009994,GO:0010033,GO:0010243,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016331,GO:0017025,GO:0019094,GO:0019219,GO:0019221,GO:0019222,GO:0019899,GO:0019953,GO:0021700,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0030154,GO:0030855,GO:0031123,GO:0031124,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0032268,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033036,GO:0034097,GO:0034248,GO:0034641,GO:0035282,GO:0035722,GO:0035770,GO:0042060,GO:0042221,GO:0042645,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043484,GO:0043631,GO:0044085,GO:0044237,GO:0044238,GO:0044344,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045451,GO:0046483,GO:0048468,GO:0048469,GO:0048477,GO:0048598,GO:0048599,GO:0048609,GO:0048729,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051179,GO:0051246,GO:0051252,GO:0051276,GO:0051641,GO:0051704,GO:0051716,GO:0060255,GO:0060429,GO:0060810,GO:0060811,GO:0065007,GO:0070013,GO:0070671,GO:0070727,GO:0070848,GO:0070887,GO:0071013,GO:0071310,GO:0071345,GO:0071349,GO:0071363,GO:0071417,GO:0071495,GO:0071704,GO:0071774,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902494,GO:1990904,GO:2000112
KEGG koko:K12898,ko:K14947
Preferred nameHNRNPH3
Seed eggNOG ortholog2880.D7FW49
Seed ortholog evalue0.0
Seed ortholog score1173.7
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig87.16735.1prot_E-siliculosus-1a_M_contig87.16735.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig87 344949..351602 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936330.3306656-CDS-E-siliculosus-1a_M_contig87:344948..3452601622936330.3306656-CDS-E-siliculosus-1a_M_contig87:344948..345260Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 344949..345260 -
1696251028.9082522-CDS-E-siliculosus-1a_M_contig87:344948..3452601696251028.9082522-CDS-E-siliculosus-1a_M_contig87:344948..345260Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 344949..345260 -
1622936330.3549006-CDS-E-siliculosus-1a_M_contig87:346164..3478921622936330.3549006-CDS-E-siliculosus-1a_M_contig87:346164..347892Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 346165..347892 -
1696251028.922865-CDS-E-siliculosus-1a_M_contig87:346164..3478921696251028.922865-CDS-E-siliculosus-1a_M_contig87:346164..347892Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 346165..347892 -
1622936330.370831-CDS-E-siliculosus-1a_M_contig87:351422..3516021622936330.370831-CDS-E-siliculosus-1a_M_contig87:351422..351602Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 351423..351602 -
1696251028.9329703-CDS-E-siliculosus-1a_M_contig87:351422..3516021696251028.9329703-CDS-E-siliculosus-1a_M_contig87:351422..351602Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 351423..351602 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936330.3847935-UTR-E-siliculosus-1a_M_contig87:351602..3521381622936330.3847935-UTR-E-siliculosus-1a_M_contig87:351602..352138Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig87 351603..352138 -
1696251028.9427369-UTR-E-siliculosus-1a_M_contig87:351602..3521381696251028.9427369-UTR-E-siliculosus-1a_M_contig87:351602..352138Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig87 351603..352138 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig87.16735.1

>prot_E-siliculosus-1a_M_contig87.16735.1 ID=prot_E-siliculosus-1a_M_contig87.16735.1|Name=mRNA_E-siliculosus-1a_M_contig87.16735.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=740bp
MQIECPLSNPHLRARHLRKNQNLTRCQTFRLLDTKDQEDTGYRLGCPKLV
RLQKLAPSRTRYTQPEVMSENGGDKRQRKDDDGVRGGNEVDTERGSKRQK
GGGNGAGKGEYTHAVHLRGLPWNASTKELVNFFAPMDVEHGDIHLVHNSR
GEAYVKLKNESDLETALKKDRNTIGRRYIEVFRSSIEDVEHALDDVSSKG
HGDGGYKGVVRMRGLPWSANEGDIRNFFDGIAIEKDGIHVTLNRDGRPSG
EAYVVFETEEAAKEALKRDKDKIGERWIDIFEATKGEVYSMTGGGGKKGD
QGGVSFDTTDSAYTGVVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTR
PDGKASGEAFVLFATEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVG
VGVKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNG
GDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTAT
VRSTVLGMERGGAMYGREPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSF
ICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMMDRYVEVFATSKEDVL
QQIGASGTAANGGNRGGGYGGGGNGGGRGYGGGGGQVGGGGGGGGGGYGG
YGQYGGGRGYGVGGHRPSPGGYASYGVRAGGGGGGGGGGGGGGGGFGYGG
GGGGVVGGPVPMGGYAQMAGGQQFGGYHRDRRDDRRDFR*
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mRNA from alignment at E-siliculosus-1a_M_contig87:344949..352138-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig87.16735.1 ID=mRNA_E-siliculosus-1a_M_contig87.16735.1|Name=mRNA_E-siliculosus-1a_M_contig87.16735.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=7190bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig87:344949..352138- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
AGGGAGGGAGATAAGCGAGGAAGCAAGGAGCACACAGCTGAAAGTTGTTG GTGAGGTTAGGGTGCGGAAGCGAAGCGGGGTGAGTGATCTGCATTTGATT GGTGTACCCGCACGAAGTGCTTCCTTTCTTGTCTGGATGGGCAGGTGTGG TGTCTGGTTGCTCTGGGGGTGGTGCTCTGGATCAGGGCGGGAGGTCACTG TTCCCCGGAAATGCACGGCCGTCCCCTGGCACAATATCTGCCCTGTCTCT CTATGCGCATCGAAACTCGTTCACACCATGCAAGAGGCACTGCAATTCTC CTCTCGTGTTTCTGCGCCGCCGGGGGATAATCTCCCCCGCGACAACGTGT CGAGGCGGACTCTACTGCTGTAGACTGCTGTTTGTTGAGAGCGCATCGAA GACGGGTATCCTTCCTCGGTTCCCCTTCTCGGGCGAGGCTTTGTGCATGA AGGGGTTGGTCAAATCCGAATCCGAAGTCTTGCCATCCCCATTCTTTGAT GTTGTGAACGGGGAGTGATGGTTCGTACCCGCAGGGATGCAAATAGAGTG CCCGCTCTCGAATCCCCATTTGCGCGCGCGGCACCTTCGGAAAAATCAAA ACTTGACACGATGTCAAACATTTCGTCTCTTGGATACCAAAGATCAGGAG GACACAGGATATCGTCTGGGATGCCCCAAATTGGTGCGCCTACAAAAGCT TGCGCCTAGTAGAACTGTGAGTATCTCCTGTGTGTTGTGGTATTTTCGTG CCATCTATTCCGGCGCTTGTCTACATCGTCGGAAGTAGTATAGTATGCGT ACATCTGACGTATCAGCCGGGGTTACACGAATGGCAGGTATGTATGTGGT GTGTTGCTCTTTTTTTGGCCCCCTGCACTCGATTGTAACATTTGAGGCCG TATGTTAACGAAGCGCCAAAAATCAAAATCAAAAATATCAAAATCAAAAT TGAGATCTGATTGGTCGAATAACTGCTACCTCCTGACGACGCCCTTTGAT ATTTGATAAATTCGTCTGTCTGGGAAGTCCCCGGGGGACTTTTTCCATCG AAATCAAAAATCAAAGAAGAAGGAGTTCAGTACATCGAAGGCTTGGAGCA CCTGCCGCACGGACGCTGCAAAAGCAAGTGCACAACACGACCTGCTGTAC ACTGCTCATAGACGGGCTGTCGGCAACCTACCACCGAGATCATGGCCATT ATTTGTAGCCAGAAGACTCAGCTCGCAGGCAAGCCCAAAACCGGGCCGGT TCGTTGGGTGGTCGAGGAGAAAATGCCGATCGTGACAAGCGGTGAACGGA CTGACGATGAAGACAGGGCTGCGCGGCTTTTTCGGGCTGTTCCGTGCGGG AGAGGGTAGTTGCAACCCTTTTTCTCCACACTCACGATACCCCAAGGCAT CTAACCTTGTACGAGGAAGATGGTGGTAGAGCTACCTCCCGCCGCGTGCC ATTACTATTGTTGTTGCTTCCTCCTTCGAAGAGTTATCGCTGGAAAACTA AACTGTGAGCAGACATTCGGCGCGAACTTGAACCAACAGGTCTCTGACGT GGATATTTTAGGGTCAACCAAAACTTTTTTCCCGATACGCACGATACCCC ACGGCAGCAGATCTTGGGCTTGAAAGATGGACCAGAGAGGTATCTCCCGC CGCGTGGCGTCGCTATTGCTGTTGCTTCCTCCTTCGAAAAGTTATCGGTG GAAAACCTAACCGGTGGCAGTGTCAAACACCGAACTTGAAGTGACCACTC GCGACCGTTGGCATTTTTGCTTCCACGCAACCTATTTTTTCCGGCGCATT CGGCACCTCACGGCGCCAAACCTTGGTATTGCCCAGGAGCCCATGGTACC AGCTCCTTCCGGATACCGTTGTTGAGGCAACTCGTTCTTTATTAGGCGAG ATATCGGTGAATACGTGAACAGAAGAGCGCAAAACCTACCCTAGAAAAAT CACCGCTTCGCTGCTGGCTCTTCCCCTGGAGCCAGGGCTTTTTGATTTTC CGCCCCATCTGTCTCCTGTTCCCGTTAACATACACGACCCTCTTTTTTCA GTTTTCCACGATAACGCATATTGATTTTGATATTGTCCACATTTTGATTT TGATTTTCGGCGCTTCGTTAATATACGGCCTGAACCCGATGCATATCATA CAATACACTACAGAGGGAGAATTTCGTTTGCAGTTCCGTTGTTTTGCCCT CAGCAAGATCCCAGGCTTGCCTCGCCTACATAAAAGAGAAAAACATACCC AGAGACCAAGAAACTTGGCCAACACAATGGCAGGCAATGCTCAGCGTTAC GCAAAAGCGTCTTCCTGATGCGGGTGGATGTCCTCATGTCCTCGCCTGAA CCAATGGACGGCCAAAGATTCGTCTGGGAAAATACCCAGCGGCGGTTTAA CATCCCTCAACATTTGATGAACCCTACCACGCGTGCGCGCGAGAGGGCAA CTGCGCAGGCCGGAGCTGATGCGATCGAGTATTTGTGCGGACTTGCGCTC TGATGCTGTGATGGCGGTGTGTGGTTCCCGGTATTGGCAGTGAAAACGTG ATTATTGTGAGGACCGATATGTAGCAGTTCCGTCACACCCGCTGTGCACT CTGTGTATTACGGATTGTTCAAAAACTGAAGTATTTTTCATGCGTTTTTG TGCACGGTACAAGAAATATTGGATGGTGGTCGAGTTGCTGAGCCGTTACC TTCGTCATCGCTCCGGCGCGTGCGTGAGGCACTTTTTATTGAACGTGTTC GCCTCTGGCACTGCTATGCATAGTATGGGCTTGCCATATCGTCCGTCCAG GGATGAGGCAGAGAAAATCCCTGTGCTCTTGCGGATGGTTACTATCGGAG AGAGGCATGTGGCTGCTGCTGCAATTTTCTCTGGTAGTCCGCTGGTCGTC ACCCTTACATCTACCCACGTCTTCATCCTGTTTGACACATGCAAAGATTT TCCTCGCTGCTACCTAGCCGCCGTGATCTGTGTGTTTGTACCTTCGCGTT TGTGATTGGGAGTATTTGTCCTCCACGCGAGCGCCAAGTCACGCAAGGGT TAACGTTAGAAGTCTGCAGCAGTCCCTTCCGTGACATCGTGTACCCTCAT CGAACTTAACGCTGTCTACATAAGATTCGAGCCCACAACTTGCTGCTAAC ATATTTCAATTGGTGCATTTGCGAGGCTGCTCACGAAACCACGGGGGTGA CCGGTGTATGCTCGTGTTTGATTGAGCATTTTCTGGCAAATGCGGGCATT AAGAGTTTCTGTTTTTTGGGCGGGAGAGAGAGTTGGTGTGAGCATTCCTC GCGGCGCCACTGCCGCCCCCCTGCCGCTGGTGCCTGTGTTTGGCCTAGAT TCGATGGCATGAGTGCCCGAAGAGCCTCGAAGTCTGCCGCAGCAATACAG ACGAATAGATGAACATCTACCTGTGATTTATCTGCTCGCCTGTAGCATGT TGCCATCCCTCGACTTCGACCTTGACTTCAACCCAATCCGAGCAACGATT CCGTCATATCCTTCAAAGACTGTGTCTTATGACCAACCAATTCGGTTACA AGTCCGTTTTTCTGCTCTTCCACAATTGTTGACTGGATAGGAAAATGACC TCGGCTCCACCCACCTCTACACAACCAGCTCTGGTGTTCGTGTAGATACA TTTAAACCTGGCCTATCTGCAAGACGTGTGGGTATTGTGGCCCTAGATCA GTTGATCCGCGTGGTTACTCTATTTTTGTGCAACCTGATCCGTGTTTGTT TGCAGTTGTTCACCATGCCTTTTCTGTGTATGCCGTCCCATCTATTCCGG CGCCGGTCTTGTACACACCCGTAAATGTTTGAAGAATCAGCCGGGGTCAC ACAGGAAGGTCACCGGAGCTTTCTTCCTTCAGTATTTGCCTCAGTTTTTT CGCGTCAAGTTCGCACATCCATTTCCCTCGTCGACCGTGGAGCCGAACAG TGTATTTACTCACGAATGAATAATTTTCACCGAATCTGCAAAGTTATTTG TTCCCATCAGAGAGACAAACTTCTTCACAACTTGATTCTAGTATGCAGGC TACCGGGGCGACCGGTTACTGGGCACAGAAAATTGAAGGGGTGCTTTGAC GTGAATAAAAGGAACACCTTTGTTGCAGTGTATATTTTCGATGACATATG CACTCAAAAGGTGTGGATGTTTATCGGGCGGCTTGTTTGTCGTGTTTTTT TTTACAAACCCGTACCACTTTGCTCCATGCGCCTCCCCGTCGGCAGCGGT ACACACAGCCTGAAGTAATGTCGGAGAACGGAGGGGATAAGAGGCAGCGG AAGGACGATGACGGCGTTCGCGGAGGCAATGAGGTGGATACCGAGCGCGG ATCGAAGCGACAGAAGGGCGGGGGAAACGGCGCTGGGAAGGGCGAATACA CCCACGCCGTTCACCTCCGCGGATTGCCTTGGAACGCGTCGACGAAAGAG CTGGTGAACTTCTTTGCGCCAATGGATGTAGAACACGGCGACATCCACTT GGTGCACAACAGCCGCGGCGAGGCTTACGTCAAACTGAAGAACGAGTCGG ACTTAGAAACCGCCCTTAAGAAGGACCGAAACACGATCGGCCGACGCTAC ATCGAGGTGTTCCGGAGCTCGATCGAGGATGTGGAACACGCTCTGGATGA TGTGAGCAGTAAGGGTCACGGCGACGGGGGTTACAAGGGCGTTGTACGGA TGAGAGGCCTGCCGTGGAGTGCGAACGAGGGAGACATTCGCAACTTCTTC GATGGGATCGCCATTGAAAAAGATGGAATCCACGTCACGCTCAACCGTGA CGGACGGCCGTCGGGGGAGGCTTACGTGGTTTTCGAGACGGAGGAAGCCG CCAAGGAAGCCCTGAAGCGGGACAAGGACAAGATCGGTGAGCGGTGGATC GACATTTTCGAGGCAACAAAGGGTGAGGTCTATTCCATGACTGGCGGAGG AGGGAAGAAAGGAGACCAGGGTGGTGTGTCTTTCGACACCACGGACAGTG CTTACACTGGCGTCGTTCGGATGCGCGGTCTGCCGTTTGAGGCTACAAAG TCGCAGATTAGAGCGTTCTTCGACGGCATCAACGTCAAGGAGTCCAACAT TTTCATTGTCACCCGCCCCGACGGAAAGGCCTCGGGGGAGGCGTTTGTCC TCTTTGCGACCGAAGCAGAAGCAGAGAAGGCGCTACTGAAGGACAAGGAG AAGCTCGGTGACCGATGGATCGACCTCTTCGCCACCAACAAGGGTGCGCT ATACCAACGCGTTGGTGTTGGAGTCAAGATGGCGGCCAAGCCAGATGCGG AGTTCCGTGGCGTCCTGCGCATGCGTGGACTTCCGTTCGCCTCTGGTGTC GAGGAAATACGGACATTTTTCCGCGGCTACAAGGTACAAGAGCACGGGGT GTTCGTGGTGAACGGAGGGGATTGGCGCCCAACGGGAGAGTCGTACGTTC TGTTTGACTCTGAAGATGAGGCCGAGCGTGCGTTTAAAGCTCTTGACAAG CAGAAGATCGGAGACCGCTGGATCGAACTGTTCCGTTCAACAAAGGGTGA CCTCTACACGGCCACAGTCCGCAGCACCGTCCTGGGCATGGAGCGAGGTG GCGCCATGTACGGGCGGGAGCCCATGACTTGCGTGAAGCTGAGGGGACTG CCGTTCAACGTGACCGAGAACAACATCTTCAGTTTCTTCGAAGGACTCAC GGTGATCGGCAGCTTCATCTGCAAGGACGTGATGGCGCGTCCTACGGGCG AGGGATTTGTGGAGTTCGCGACGGTTGACGACTGTCAGCTCGCCATGAGC AGGAACCGCGAGTCCATGATGGACCGCTATGTGGAGGTGTTCGCTACCAG CAAGGAGGACGTTCTTCAACAAATCGGTGCATCTGGGACGGCAGCCAACG GCGGAAACCGAGGCGGGGGTTACGGTGGCGGCGGAAATGGGGGAGGGAGA GGATATGGCGGCGGTGGTGGACAGGTGGGTTCGGTTGCAAACCTAGATGT AGATGTGCAGTCCACGCCGGTATGCTATACGTTTCTATGAAGATCAGAAC ATTGACGTTCTTTCAGGCCGCGGTCGACTCAATAGGAATCATGACAGGGT TCGTCGCCTCCTCAGCCTGAACGCGGGGGAGTCTGCCACCTCAAACTATT GTAGTGTGGGGCCCACCCGAGCGGGCACTTTTCATGAACCAGAGGAGCTC TGCGAATATGAGAGGATTTTAGCCTCGAACTACCCTTCTTACGGTCAAAT TTAACTGACCCCTTTTGCTGGATCATCAAGAAGTTTTTTTTTTTTTTTTG TGTGTCTTTATTATTAGCATCGACCGCACTAACCGGCTGACCAATGAAAA GACGTCAAGAAGCGTCCGCTTGATTCACGAGTACGCAACGTTGAATATTC AAGCAGAAAATTACAAATTACAACACACCAGCTACACAGTTATACGCAGG AAGTATCATGAGTACGAGCGGAGTATGGATCACAGGGGCATCGATCAATG TTGGATTTGTTTTTGGGGGGTGGCTGTACCCGTATGGACTATGGAGAGAG GGCTCGAGCTGCCAAGCAAGCCATCTCTCCGAAATTCTAATGGCTGCCCA AATTCTGGTTCGATCTCACAAAATCATGGCGATCGGTTGTATATGGCTGC CTGCCGCTAGTTTCTGTGCGGTCGACGCCTCTCATGCATGCCATGTTGCT TCGAGCACGACCTTAGCCTTCCACACGCGCTCTCTGCAAAGGGCCGAAGT CGAGAAGGGCCATCTTGAGCTAGATGGAGAGGGTCCGTGGGCGTTGAAAG AAGAATTTCTGAATTCCGATGTTCGCCCTGTATTCGAGAGATGTTAACAT TGACGACCATGCGCCTACGGTTGCTCAGGTCGGTGGTGGTGGTGGCGGCG GCGGCGGCGGCTATGGCGGATACGGGCAGTATGGCGGGGGAAGAGGATAC GGGGTTGGTGGGCACCGCCCATCGCCTGGTGGATATGCATCATACGGAGT CAGGGCCGGAGGAGGCGGTGGAGGTGGCGGCGGTGGTGGTGGCGGGGGCG GCGGCTTTGGTTACGGCGGAGGCGGCGGCGGAGTAGTCGGAGGGCCTGTT CCTATGGGCGGCTACGCACAGATGGCCGGCGGGCAGCAGTTCGGAGGTTA TCACAGAGATAGAAGGGACGACAGAAGGGACTTCCGCTGA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig87:344949..352138-

>mRNA_E-siliculosus-1a_M_contig87.16735.1 ID=mRNA_E-siliculosus-1a_M_contig87.16735.1|Name=mRNA_E-siliculosus-1a_M_contig87.16735.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=4440bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig87:344949..352138- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGCAAATAGAGTGCCCGCTCTCGAATCCCCATTTGCGCGCGCGGCACCT
TCGGAAAAATCAAAACTTGACACGATGTCAAACATTTCGTCTCTTGGATA
CCAAAGATCAGGAGGACACAGGATATCGTCTGGGATGCCCCAAATTGGTG
CGCCTACAAAAGCTTGCGCCTAGTAGAACTATGCAAATAGAGTGCCCGCT
CTCGAATCCCCATTTGCGCGCGCGGCACCTTCGGAAAAATCAAAACTTGA
CACGATGTCAAACATTTCGTCTCTTGGATACCAAAGATCAGGAGGACACA
GGATATCGTCTGGGATGCCCCAAATTGGTGCGCCTACAAAAGCTTGCGCC
TAGTAGAACTCGGTACACACAGCCTGAAGTAATGTCGGAGAACGGAGGGG
ATAAGAGGCAGCGGAAGGACGATGACGGCGTTCGCGGAGGCAATGAGGTG
GATACCGAGCGCGGATCGAAGCGACAGAAGGGCGGGGGAAACGGCGCTGG
GAAGGGCGAATACACCCACGCCGTTCACCTCCGCGGATTGCCTTGGAACG
CGTCGACGAAAGAGCTGGTGAACTTCTTTGCGCCAATGGATGTAGAACAC
GGCGACATCCACTTGGTGCACAACAGCCGCGGCGAGGCTTACGTCAAACT
GAAGAACGAGTCGGACTTAGAAACCGCCCTTAAGAAGGACCGAAACACGA
TCGGCCGACGCTACATCGAGGTGTTCCGGAGCTCGATCGAGGATGTGGAA
CACGCTCTGGATGATGTGAGCAGTAAGGGTCACGGCGACGGGGGTTACAA
GGGCGTTGTACGGATGAGAGGCCTGCCGTGGAGTGCGAACGAGGGAGACA
TTCGCAACTTCTTCGATGGGATCGCCATTGAAAAAGATGGAATCCACGTC
ACGCTCAACCGTGACGGACGGCCGTCGGGGGAGGCTTACGTGGTTTTCGA
GACGGAGGAAGCCGCCAAGGAAGCCCTGAAGCGGGACAAGGACAAGATCG
GTGAGCGGTGGATCGACATTTTCGAGGCAACAAAGGGTGAGGTCTATTCC
ATGACTGGCGGAGGAGGGAAGAAAGGAGACCAGGGTGGTGTGTCTTTCGA
CACCACGGACAGTGCTTACACTGGCGTCGTTCGGATGCGCGGTCTGCCGT
TTGAGGCTACAAAGTCGCAGATTAGAGCGTTCTTCGACGGCATCAACGTC
AAGGAGTCCAACATTTTCATTGTCACCCGCCCCGACGGAAAGGCCTCGGG
GGAGGCGTTTGTCCTCTTTGCGACCGAAGCAGAAGCAGAGAAGGCGCTAC
TGAAGGACAAGGAGAAGCTCGGTGACCGATGGATCGACCTCTTCGCCACC
AACAAGGGTGCGCTATACCAACGCGTTGGTGTTGGAGTCAAGATGGCGGC
CAAGCCAGATGCGGAGTTCCGTGGCGTCCTGCGCATGCGTGGACTTCCGT
TCGCCTCTGGTGTCGAGGAAATACGGACATTTTTCCGCGGCTACAAGGTA
CAAGAGCACGGGGTGTTCGTGGTGAACGGAGGGGATTGGCGCCCAACGGG
AGAGTCGTACGTTCTGTTTGACTCTGAAGATGAGGCCGAGCGTGCGTTTA
AAGCTCTTGACAAGCAGAAGATCGGAGACCGCTGGATCGAACTGTTCCGT
TCAACAAAGGGTGACCTCTACACGGCCACAGTCCGCAGCACCGTCCTGGG
CATGGAGCGAGGTGGCGCCATGTACGGGCGGGAGCCCATGACTTGCGTGA
AGCTGAGGGGACTGCCGTTCAACGTGACCGAGAACAACATCTTCAGTTTC
TTCGAAGGACTCACGGTGATCGGCAGCTTCATCTGCAAGGACGTGATGGC
GCGTCCTACGGGCGAGGGATTTGTGGAGTTCGCGACGGTTGACGACTGTC
AGCTCGCCATGAGCAGGAACCGCGAGTCCATGATGGACCGCTATGTGGAG
GTGTTCGCTACCAGCAAGGAGGACGTTCTTCAACAAATCGGTGCATCTGG
GACGGCAGCCAACGGCGGAAACCGAGGCGGGGGTTACGGTGGCGGCGGAA
ATGGGGGAGGGAGAGGATATGGCGGCGGTGGTGGACAGCGGTACACACAG
CCTGAAGTAATGTCGGAGAACGGAGGGGATAAGAGGCAGCGGAAGGACGA
TGACGGCGTTCGCGGAGGCAATGAGGTGGATACCGAGCGCGGATCGAAGC
GACAGAAGGGCGGGGGAAACGGCGCTGGGAAGGGCGAATACACCCACGCC
GTTCACCTCCGCGGATTGCCTTGGAACGCGTCGACGAAAGAGCTGGTGAA
CTTCTTTGCGCCAATGGATGTAGAACACGGCGACATCCACTTGGTGCACA
ACAGCCGCGGCGAGGCTTACGTCAAACTGAAGAACGAGTCGGACTTAGAA
ACCGCCCTTAAGAAGGACCGAAACACGATCGGCCGACGCTACATCGAGGT
GTTCCGGAGCTCGATCGAGGATGTGGAACACGCTCTGGATGATGTGAGCA
GTAAGGGTCACGGCGACGGGGGTTACAAGGGCGTTGTACGGATGAGAGGC
CTGCCGTGGAGTGCGAACGAGGGAGACATTCGCAACTTCTTCGATGGGAT
CGCCATTGAAAAAGATGGAATCCACGTCACGCTCAACCGTGACGGACGGC
CGTCGGGGGAGGCTTACGTGGTTTTCGAGACGGAGGAAGCCGCCAAGGAA
GCCCTGAAGCGGGACAAGGACAAGATCGGTGAGCGGTGGATCGACATTTT
CGAGGCAACAAAGGGTGAGGTCTATTCCATGACTGGCGGAGGAGGGAAGA
AAGGAGACCAGGGTGGTGTGTCTTTCGACACCACGGACAGTGCTTACACT
GGCGTCGTTCGGATGCGCGGTCTGCCGTTTGAGGCTACAAAGTCGCAGAT
TAGAGCGTTCTTCGACGGCATCAACGTCAAGGAGTCCAACATTTTCATTG
TCACCCGCCCCGACGGAAAGGCCTCGGGGGAGGCGTTTGTCCTCTTTGCG
ACCGAAGCAGAAGCAGAGAAGGCGCTACTGAAGGACAAGGAGAAGCTCGG
TGACCGATGGATCGACCTCTTCGCCACCAACAAGGGTGCGCTATACCAAC
GCGTTGGTGTTGGAGTCAAGATGGCGGCCAAGCCAGATGCGGAGTTCCGT
GGCGTCCTGCGCATGCGTGGACTTCCGTTCGCCTCTGGTGTCGAGGAAAT
ACGGACATTTTTCCGCGGCTACAAGGTACAAGAGCACGGGGTGTTCGTGG
TGAACGGAGGGGATTGGCGCCCAACGGGAGAGTCGTACGTTCTGTTTGAC
TCTGAAGATGAGGCCGAGCGTGCGTTTAAAGCTCTTGACAAGCAGAAGAT
CGGAGACCGCTGGATCGAACTGTTCCGTTCAACAAAGGGTGACCTCTACA
CGGCCACAGTCCGCAGCACCGTCCTGGGCATGGAGCGAGGTGGCGCCATG
TACGGGCGGGAGCCCATGACTTGCGTGAAGCTGAGGGGACTGCCGTTCAA
CGTGACCGAGAACAACATCTTCAGTTTCTTCGAAGGACTCACGGTGATCG
GCAGCTTCATCTGCAAGGACGTGATGGCGCGTCCTACGGGCGAGGGATTT
GTGGAGTTCGCGACGGTTGACGACTGTCAGCTCGCCATGAGCAGGAACCG
CGAGTCCATGATGGACCGCTATGTGGAGGTGTTCGCTACCAGCAAGGAGG
ACGTTCTTCAACAAATCGGTGCATCTGGGACGGCAGCCAACGGCGGAAAC
CGAGGCGGGGGTTACGGTGGCGGCGGAAATGGGGGAGGGAGAGGATATGG
CGGCGGTGGTGGACAGGTCGGTGGTGGTGGTGGCGGCGGCGGCGGCGGCT
ATGGCGGATACGGGCAGTATGGCGGGGGAAGAGGATACGGGGTTGGTGGG
CACCGCCCATCGCCTGGTGGATATGCATCATACGGAGTCAGGGCCGGAGG
AGGCGGTGGAGGTGGCGGCGGTGGTGGTGGCGGGGGCGGCGGCTTTGGTT
ACGGCGGAGGCGGCGGCGGAGTAGTCGGAGGGCCTGTTCCTATGGGCGGC
TACGCACAGATGGCCGGCGGGCAGCAGTTCGGAGGTTATCACAGAGATAG
AAGGGACGACAGAAGGGACTTCCGCTGAGTCGGTGGTGGTGGTGGCGGCG
GCGGCGGCGGCTATGGCGGATACGGGCAGTATGGCGGGGGAAGAGGATAC
GGGGTTGGTGGGCACCGCCCATCGCCTGGTGGATATGCATCATACGGAGT
CAGGGCCGGAGGAGGCGGTGGAGGTGGCGGCGGTGGTGGTGGCGGGGGCG
GCGGCTTTGGTTACGGCGGAGGCGGCGGCGGAGTAGTCGGAGGGCCTGTT
CCTATGGGCGGCTACGCACAGATGGCCGGCGGGCAGCAGTTCGGAGGTTA
TCACAGAGATAGAAGGGACGACAGAAGGGACTTCCGCTGA
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