mRNA_E-siliculosus-1a_M_contig87.16717.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig87.16717.1 vs. uniprot
Match: A0A6H5JQD1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQD1_9PHAE) HSP 1 Score: 737 bits (1902), Expect = 4.940e-267 Identity = 390/409 (95.35%), Postives = 394/409 (96.33%), Query Frame = 1
Query: 1 MTLSAHRRYGVGIALWLMVLMIAMSLVSMESTDDTIMVRRRRKERGSPFDLSTEALASIADLDDHPIEDNDAARADRMLAALESIPEGERQGMDLDVEALRSKPFAERLAELQELWEVRQQELREAYDAMPKVNELLMERIDILNNADATDGALTGALTDLEDLLSDIDMAKDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPDHQLWVLEDGPVSQPSVLALLLENAMAATTPTLRSKVVYALSACLTNNGDVQLQFGSRMGEAVLSAMYDADGSDRRVRMKTLTLMSDLLQEAARGSPAAVLATMPVGSTASSGGAWCRRVDEALQHAHSPAALEKAIEAVQSFTPSCRDQFAQLDTKRRLEGLAQQCRTSPPEGFEVAEEEFHKELTQKLEECAVALR 1227
M LSAHRRYGVGIALWLMVLMIAMS VSMESTDDTIM SPFDLSTEALASIADLDDHPIEDNDAARADRMLAALESIPEGERQGMDLD EALRSKP AERLAELQ LWEVRQQELREAYDAMPKVNELLMERIDILNNADATDGALTGALTDLEDLLSDIDMA+DFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEP+HQLWVLEDGP SQPSVLALLLENAMAATTPTLRSKVVYALSACLTNNGDVQLQFGSRMGEAVLSAMYDADGSDRRVR+KTLTLMSDLLQEAARGSPAAVLATMPVGSTASSGGAWCRRVDEALQHAHSPAALEKAIEAVQSFTPSCRDQFAQLDTKRRLEGLAQQCRTSPPEGFEVAEEE+HKELTQKLEECAVALR
Sbjct: 1 MRLSAHRRYGVGIALWLMVLMIAMSSVSMESTDDTIM--------WSPFDLSTEALASIADLDDHPIEDNDAARADRMLAALESIPEGERQGMDLDAEALRSKPLAERLAELQGLWEVRQQELREAYDAMPKVNELLMERIDILNNADATDGALTGALTDLEDLLSDIDMARDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPEHQLWVLEDGPDSQPSVLALLLENAMAATTPTLRSKVVYALSACLTNNGDVQLQFGSRMGEAVLSAMYDADGSDRRVRIKTLTLMSDLLQEAARGSPAAVLATMPVGSTASSGGAWCRRVDEALQHAHSPAALEKAIEAVQSFTPSCRDQFAQLDTKRRLEGLAQQCRTSPPEGFEVAEEEYHKELTQKLEECAVALR 401
BLAST of mRNA_E-siliculosus-1a_M_contig87.16717.1 vs. uniprot
Match: A0A835Z7K3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7K3_9STRA) HSP 1 Score: 144 bits (363), Expect = 2.160e-34 Identity = 123/403 (30.52%), Postives = 174/403 (43.18%), Query Frame = 1
Query: 124 RKERGSPFDLST---EALASIADLDDHPIEDNDAARADRMLAALESIPEGERQGMDLDVEALRSKPFAERLAELQELWEVRQQELREAYDAMPKVNELLMERIDILNNADATDGALTGALTDLEDLLSDIDMAKDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPDHQLWVLEDGPVSQP---------------------------------------------------------SVLALLLENAMAATTPTLRSKVVYALSACLTNNGDVQLQFGSRMG-----EAVLSAMYDADGSDRRVRMKTLTLMSDLLQEAAR--GSPAAVLATMPVGSTASSGGAWCRRVDEALQHAHSPAA---LEKAIEAVQSFTPSCRDQFAQLDTKRRLEGL 1122
+K G DL+ SI +DDHP++D AR RML AL +P E++ M LD A+ + +ER LQ LWE RQ EL+E Y MP ++L I IL + + D L AL DLED LSD+DMA+DFHT+GG+ L ++L R VRE AAW +GTAVKN + W LE GP + + + LLE A L+ K +YAL++ L +N Q F + G A +A D + R + K +TL+SD++ + A GS +A WC + L A + LE+A++A P C + A + + RL +
Sbjct: 79 KKAAGLNIDLAALEKRTADSIRGIDDHPVQDTPEARTQRMLEALLELPREEQERMQLD--AILALDPSERPPALQALWERRQAELKEIYAGMPTPAKILGSLIAILRSEASGDAVLLDALLDLEDHLSDVDMARDFHTLGGWHPLQALLHAERAPAVREHAAWVIGTAVKNVIEFHGWALETGPAAAADASESVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAVAGAGDGLNAIDRLLECVADARHAGLQGKALYALASALRHNARAQAHFVTTGGLDALRNAAATAADDGGAAARGLLTKAITLVSDIVADEAHEEGSGGGAVAAGVARDER-----WCVLLHALLLRADAARGGTQLERALDAALVLAPLCGARPAGVALEARLAAM 474
BLAST of mRNA_E-siliculosus-1a_M_contig87.16717.1 vs. uniprot
Match: A0A7R9U9J5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9J5_9STRA) HSP 1 Score: 119 bits (297), Expect = 4.680e-26 Identity = 85/247 (34.41%), Postives = 129/247 (52.23%), Query Frame = 1
Query: 343 LWEVRQQELREAYDAMPKVNELLMERIDILNNADATDGALTGALTDLEDLLSDIDMAKDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPDHQLWVLE-----DGPVSQPSVLALLLENA-MAATTPTLRSKVVYALSACLTNNGDVQLQFGSRMGEAVLSAMYDADGSDRRVRMKTLTLMSDLLQEAARGSPAAVLATMPVGSTASSGGA----WCRRVDEALQHAHSPAALEKAIEAV 1053
+W+ RQQ+LREA ++M + +ERI +L+ AD+++ + L LED L DIDMA+DFHT+GG+P L +L S E VR AA VG V+N P+ Q WV E V + +++ LL+ +A+T +SK + ALS L N+ + F G A L A+ D D + R+ ++ + ++SDL EAA + + GG WCRR ++ A ++ EAV
Sbjct: 137 IWQKRQQDLREAIESMGSHVNIFLERIMVLSAADSSEEDVMKVLLQLEDDLMDIDMARDFHTVGGWPALTGLLADSHAEDVRCQAALVVGNTVRNTPEFQAWVSEVPMGSAADVEEATMMHLLVSMMNSSASTAKEQSKALSALSGALYNHVENLQLFADLDGSAKLLALLD-DAVEDRLSLRAIRIVSDLAFEAAESGDEELKGLL--------GGIFDARWCRRTEDLASAAKGAGTDDRLSEAV 374
BLAST of mRNA_E-siliculosus-1a_M_contig87.16717.1 vs. uniprot
Match: W7TQS8_9STRA (Armadillo-like helical n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQS8_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 1.330e-18 Identity = 118/388 (30.41%), Postives = 158/388 (40.72%), Query Frame = 1
Query: 217 ARADRMLAALESIPEGERQGMDLDVEALRSKPFA-ERLAE-----------------LQELWEVRQQELREAYDAMPKVNELLMERIDILNNADATDGALTGALTDLEDLLSDIDMAKDFHTIGGFPTLASMLRCSRP-EGVREL---AAWAVGTAVKNEPDHQLWVLEDGPVSQPSVLALLLENAMAATTPT---------LRSKVVYALSACLTNNGDVQLQFGSRMGEAVLSAM------------YDADGSDRRVRMKTLTLMSDLLQEAARGSPAAVLAT---------------MPVGSTASSGGAWCRRVDEALQHA------HSPAALEKAIEAVQSFTPSCRDQFAQLDTKRRLEGLAQQCRTSPPEGFEVAEEEFHKE 1188
+R ML L +P ER M +D L S+P A E L E ++ LW RQ L +AY+ M K E L I +L + + AL +LED LSD+DMA+DF+T+GG+P L S L EG RE+ AAW VG AVKN+ Q WVLE G S L LL T L K VYA+++ N VQ + G VL + + G R + +K + DL EA + AA+ + G T+ AWC + L+ ALE +EA+Q C Q + R +E L ++ R EV EEE KE
Sbjct: 174 SRRGTMLKVLSGLPPQERASMGID-SLLASRPRAGEALGEEVVEGEEREEERAFWKQVETLWAERQDLLLQAYENMLKPAEELGRLIGVLKEGGEEE--VMRALMELEDWLSDVDMAQDFYTLGGWPLLVSKLGWEGGREGGREVQWRAAWVVGNAVKNDRHFQAWVLEGGKEGGASALTRLLTICREGGTEAWGEGEEEEELLRKAVYAVTSAARGNPAVQAKLVEEGGLEVLGHLLHSSVPPSPGSSHQRKGQRRALCLKLIAFAQDLALEAKQAVAAALEVAEARHPPSIXXXXXXXLLAGVTSP---AWCEGILGLLEEVVGGEGGREARALEGVLEAMQLLHVDCVRQGRWEEGGREVERLLRRAR-------EVVEEEDWKE 548
BLAST of mRNA_E-siliculosus-1a_M_contig87.16717.1 vs. uniprot
Match: A0A7S3M316_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M316_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 8.260e-16 Identity = 59/133 (44.36%), Postives = 74/133 (55.64%), Query Frame = 1
Query: 439 ADATDGALTGALTDLEDLLSDIDMAKDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPDHQLWVLE-------DGPVSQPSVLALLLE---------NAMAATTPTLRSKVVYALSACLTNNGDVQ 789
AD T L LE LL D+D A+DFHTIGG+PTL S L+ S+P VR +AA AVGTA+KN D+QLW LE D S L LL+E +A+ L+ + +YALSA + N DVQ
Sbjct: 204 ADLTTDDKVYLLRQLESLLDDVDNARDFHTIGGWPTLLSHLKASQPLQVRSVAALAVGTAIKNTYDYQLWTLESPASSTTDSGALVVSGLDLLIEALGTSENTAEEIASDRFELQKRALYALSAAMRGNMDVQ 336
BLAST of mRNA_E-siliculosus-1a_M_contig87.16717.1 vs. uniprot
Match: A0A7S2RJU1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJU1_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 9.080e-16 Identity = 68/206 (33.01%), Postives = 105/206 (50.97%), Query Frame = 1
Query: 334 LQELWEVRQQELREAYDAMPKVNELLMERIDILNNADATDGALTGALTDLEDLLSDIDMAKDFHT-IGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPDHQLWVLEDGPVS-----QPSVLAL-----LLENAMAATTPTLRSKVVYALSACLTNNGDVQLQF----GSRMGEAVLSAMYDADGSDRRVRMKTLTLMSDLLQE 906
L+ LWE RQ+EL+ A +AM + + L I + + D + ++ AL DLE+ LSD+DMA+D H +GG+P L +L + +R AA +GTA+KNEP Q W+LE S Q + AL +LE + + +YAL++ L +N Q F G +A+L D + + K L+ D+L+E
Sbjct: 121 LKVLWEQRQEELKAAMEAMQEAADTLSSIIRQIRSGD--EESVEAALADLEEHLSDVDMARDLHNALGGWPPLVRLLSSDQSPRIRAGAALVIGTAIKNEPVFQSWILESAAESVDVNPQQNETALSSLLGMLEEQGTGDVQVMHRRSMYALASALRHNLRNQAAFMELGGLERLQALLVKSCDGGLENPALVSKLAALVFDVLEE 324
BLAST of mRNA_E-siliculosus-1a_M_contig87.16717.1 vs. uniprot
Match: A0A7S0J9D3_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J9D3_9EUKA) HSP 1 Score: 87.8 bits (216), Expect = 3.400e-15 Identity = 60/148 (40.54%), Postives = 85/148 (57.43%), Query Frame = 1
Query: 469 ALTDLEDLLSDIDMAKDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPDHQLWVLEDGPVSQPSVLALLLENAMAATTPTLRSKVVYALSACLTNNGDVQLQFGSRMGEAVLSAMYDADGSDRRVRMKTLTLMSDLLQEAA 912
AL L++L+ D+D A+DF TIGGF + +L PE V AW VGTAV+N+ + QL +LE ++A LL+ + +R+KV+YA+S L N + QL F R G +VL D S R +R K L L++DLL E+A
Sbjct: 171 ALFALQELVEDLDNARDFMTIGGFKQVMELLGSDTPELVAA-TAWVVGTAVQNQRELQLHMLEL------ELMAPLLQLLHDHSAIDVRAKVLYAVSGLLRNCPEAQLDFRRRQGVSVLVMTLARDSSPRLMR-KALVLLTDLLSESA 310
BLAST of mRNA_E-siliculosus-1a_M_contig87.16717.1 vs. uniprot
Match: A0A7S2FHY2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FHY2_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 5.470e-15 Identity = 87/290 (30.00%), Postives = 132/290 (45.52%), Query Frame = 1
Query: 232 MLAALESIPEGERQGMDLDVEALRSKPFAERL--AELQELWEVRQQELREAYDAMPKVNELLMERIDIL----NNADATDGALTGALTDLEDLLSDIDMAKDFH-TIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPDHQLWVLEDGPVS------------QPSVLALLLENAMAATT-------------------PTL-----------RSKVVYALSACLTNNGDVQLQFGSRMGEAVLSAMYDADG----SDR-----------RVRMKTLTLMSDLLQEA 909
M+ L ++P E+ + +SK E A+L+ LWEVRQ EL EA A + + L I L ++ A D + AL LED LSD+DMA+DFH +GG+P+L ++L ++ VR AA +GTAVKN+ + Q W+LE +S + + LALL + T PTL R K +YA+++ + N Q F S G + L DA+ SD+ ++R+K T+++D + EA
Sbjct: 52 MIRTLSALPVVEQDRIGFTALMDKSKASGEEALEADLRSLWEVRQVELEEAMAATEESADFLAALIKTLKSHVDSNSADDETVLDALNGLEDHLSDMDMARDFHDALGGWPSLTNLLLPTQSLQVRAAAALVMGTAVKNQDEFQGWILEPVALSLSTDTTSEEHMHEEAALALLTHMLVKGCTXXXXXXXXGTTTSVTLCNEPTLEESDPVGALAMRKKALYAIASGIRQNPHTQSLFLSLDGLSRLEHAADAEAEFAASDKHKKRPDHSSLWQLRLKLATMLADWITEA 341
BLAST of mRNA_E-siliculosus-1a_M_contig87.16717.1 vs. uniprot
Match: A0A7S0LLH1_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LLH1_9EUKA) HSP 1 Score: 85.1 bits (209), Expect = 2.730e-14 Identity = 61/148 (41.22%), Postives = 82/148 (55.41%), Query Frame = 1
Query: 469 ALTDLEDLLSDIDMAKDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPDHQLWVLEDGPVSQPSVLALLLENAMAATTPTLRSKVVYALSACLTNNGDVQLQFGSRMGEAVLSAMYDADGSDRRVRMKTLTLMSDLLQEAA 912
AL L++L+ D+D AKDF IGGF + +L P V +A W VGTAV+N+ + QL +LE ++A LL+ A T +R+K +YALS L N + QLQF G VL AD S R+ K L L++DLL E A
Sbjct: 173 ALLALQELVEDLDNAKDFMAIGGFKQVMELLGSETPALVAGVA-WIVGTAVQNQRELQLQMLEL------HLMAPLLQLLHAHTAAEVRTKALYALSGLLRNCAEAQLQFKQGEGVGVLLRTL-ADVSSPRLVRKALVLLTDLLAERA 312
BLAST of mRNA_E-siliculosus-1a_M_contig87.16717.1 vs. uniprot
Match: A0A7S1UMA0_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UMA0_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 3.910e-14 Identity = 65/213 (30.52%), Postives = 105/213 (49.30%), Query Frame = 1
Query: 340 ELWEVRQQELREAYDAMPKVNELLMERIDILNNADATDGALTGALTDLEDLLSDIDMAKDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPDHQLWVLED------------GPVSQPSVLALLLENAM---AATTPTLRSKVVYALSACLTN---NGDVQLQFGSRMG-EAVLSAMYDADGSDRRVRMKTLTLMSDLLQEAARGS 921
E+W RQ +L+ A +++ + + + +L + A+ L L + + L D+D+A DFH++GG+P +A++L PEGVR AA + +V+N P+ Q WV D G V AL L M +++TP + K ++ALSA L N N D L G AVL+ A D ++ + + + +DL EAA +
Sbjct: 202 EVWRKRQVDLKAAMESVADTHSIFTGYLGVLQDPAASAEELVAMLDVVAEQLMDVDLANDFHSMGGWPIVAALLAEEHPEGVRAAAAAVIADSVRNVPEFQGWVGVDKLGRLEVVGDDAGGDGSGEVTALDLLTDMFSSSSSTPKEQQKALFALSAALYNHPANLDKFLDLGGAAKLSAVLAPPEGAPKQDSKLIQRAINIAADLAFEAAESA 414 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig87.16717.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig87.16717.1 >prot_E-siliculosus-1a_M_contig87.16717.1 ID=prot_E-siliculosus-1a_M_contig87.16717.1|Name=mRNA_E-siliculosus-1a_M_contig87.16717.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=410bp MTLSAHRRYGVGIALWLMVLMIAMSLVSMESTDDTIMVRRRRKERGSPFDback to top mRNA from alignment at E-siliculosus-1a_M_contig87:114299..117102- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig87.16717.1 ID=mRNA_E-siliculosus-1a_M_contig87.16717.1|Name=mRNA_E-siliculosus-1a_M_contig87.16717.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2804bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig87:114299..117102- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig87:114299..117102- >mRNA_E-siliculosus-1a_M_contig87.16717.1 ID=mRNA_E-siliculosus-1a_M_contig87.16717.1|Name=mRNA_E-siliculosus-1a_M_contig87.16717.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2460bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig87:114299..117102- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |