mRNA_E-siliculosus-1a_M_contig86.16687.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig86.16687.1
Unique NamemRNA_E-siliculosus-1a_M_contig86.16687.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig86.16687.1 vs. uniprot
Match: A0A6H5L474_9PHAE (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L474_9PHAE)

HSP 1 Score: 779 bits (2012), Expect = 7.450e-276
Identity = 425/437 (97.25%), Postives = 429/437 (98.17%), Query Frame = 3 
Query:    9 RLGTQQHLKQRSKMATPAQPLENDPQVDFYVLLGVSKTATEKEINTAYKKLAMKYHPDRTRGDLEAAEKFKEIATAYAVLSDPNRRRQYDLSGGDEEAKGADYTPMDMEGIGSMGRVVGALIGKLGVPIQTSIAQSSLSEAYELCQNSGLNERNPRLLPMECGVEYKGTVEKQQSVFFMIHVTKDMARDGLVLRCTSTNKSRFKLVLFDNAGKARYQEESSSTSNHEGFTMCSLFFAPYEVSNVADTINIAGLKGEEVPPIFHRLDLFQVTSRQLEEGDHLVGVYGDNWLRAASFSLMAIPLSPRAKEEEASVVSVDAQLVSQREQLKAFKPEYLEAKAKWEATLGKLEELTAHTTELVRAREVVYDQLVGASLSAYAASDQAAASTARRGVPANGSVGSAVNVNHALKKXXXXXXXXXXXXXXXXXXXXXLFGRLF 1319
            R+GT+QHLKQR  MATPA+PLENDPQVDFYVLLGVSKTATEKEINTAYKKLAMKYHPDRTRGDLEAAEKFKEIATAYAVLSDPNRRRQYDLSGGDEEAKGADYTPMDMEGIGSMGRVVGALIGKLGVPIQTSIAQSSLSEAYELCQNSGLNERNPRLLPMECGVEYKGTVEKQQSVFFMIHVTKDMARDGLVLRCTSTNKSRFKLVLFDNAGKARYQEESSSTSN EGFTMCSLFFAPYEVSNVADTINIAGLKGEEVPPIFHRLDLFQ+TSRQLEEGDHLVGVYGDNWLRAASFSLMAIPLSPRAKEEEASVVSVDAQLVSQREQLKAFKPEYLEAKAKWEATLGKLEELTAHTTELVRAREVVYDQLVGASLSAYAASDQAAAS ARRGVPANGSVGSAVNVNHALKKXXXXXXXXXXXXXXXXX    LFGRLF
Sbjct:    8 RIGTRQHLKQRLTMATPARPLENDPQVDFYVLLGVSKTATEKEINTAYKKLAMKYHPDRTRGDLEAAEKFKEIATAYAVLSDPNRRRQYDLSGGDEEAKGADYTPMDMEGIGSMGRVVGALIGKLGVPIQTSIAQSSLSEAYELCQNSGLNERNPRLLPMECGVEYKGTVEKQQSVFFMIHVTKDMARDGLVLRCTSTNKSRFKLVLFDNAGKARYQEESSSTSNREGFTMCSLFFAPYEVSNVADTINIAGLKGEEVPPIFHRLDLFQLTSRQLEEGDHLVGVYGDNWLRAASFSLMAIPLSPRAKEEEASVVSVDAQLVSQREQLKAFKPEYLEAKAKWEATLGKLEELTAHTTELVRAREVVYDQLVGASLSAYAASDQAAASAARRGVPANGSVGSAVNVNHALKKXXXXXXXXXXXXXXXXXSVGGLFGRLF 444
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig86.16687.1 vs. uniprot
Match: A0A835ZFM4_9STRA (Heat shock protein 40 like protein/ DnaJ domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFM4_9STRA)

HSP 1 Score: 335 bits (860), Expect = 5.690e-103
Identity = 182/365 (49.86%), Postives = 243/365 (66.58%), Query Frame = 3 
Query:   54 TPAQPLENDPQVDFYVLLGVSKTATEKEINTAYKKLAMKYHPDRTRGDLEAAEKFKEIATAYAVLSDPNRRRQYDLSGGDEEAKGADYTPMDMEGIGSMGRVVGALIGKLGVPIQTSIAQSSLSEAYELCQ-NSGLNERNPRLLPMECGVEYKGTVEKQQSVFFMIHVTKDMARDGLVLRCTSTNKSRFKLVLFDNAGKARYQEESSSTSNHEGFTMCSLFFAPYEVSNVADTINIAGLKGEEVPPIFHRLDLFQVTSRQLEEGDHLVGVYGDNWLRAASFSLMAIPLSPRAK-EEEASVVSVDAQLVSQREQLKAFKPEYLEAKAKWEATLGKLEELTAHTTELVRAREVVYDQLVGASLSAYA 1142
            +P +P+     +D Y  LGV +TATE EI  AYKKLA++YHPDR  GD  AAE FKEI+TAY VL DPN+RR YDLS    +A       +D+  +G +GRV GA+ GK+G+PI T+IAQ +L++A E+CQ   GL E NP LLP++ GV Y G V +QQ  FF + V+ ++A  GL LRC S NKSRFKLV+FD  G  RYQEES+ +S  + +T C+LFF P+EV ++AD + +   + EE+PP+F+RLD F +T R+LE GDHLV VYGDN+LR ASF+L A  + P A  E +  +   DA ++ QR +L+AF+ EYL+A+  W  T  +L   T +T   V+ RE   D LVG SL A A
Sbjct:    7 SPERPMAAIAPMDHYERLGVERTATEVEITKAYKKLALRYHPDRNLGDAAAAEVFKEISTAYTVLLDPNKRRHYDLSMASPDAANH-LESIDLANMGQLGRVFGAMAGKMGIPIPTNIAQETLTKAQEICQLEPGLCEDNPHLLPLKLGVSYSGNVNRQQGAFFFLRVSAEVADMGLALRCASHNKSRFKLVVFDAKGGVRYQEESAKSSRSDKYTTCTLFFTPFEVGSLADRMPLPNPE-EELPPVFNRLDTFHMTRRKLERGDHLVCVYGDNFLRGASFALSAAAIPPAAALEAQGRLREADAAILQQRSELRAFQMEYLQARKLWLETQERLAAHTENTAAAVQEREAAIDALVGLSLDACA 369
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig86.16687.1 vs. uniprot
Match: A0A7E4W0I8_PANRE (J domain-containing protein n=2 Tax=Panagrellus redivivus TaxID=6233 RepID=A0A7E4W0I8_PANRE)

HSP 1 Score: 255 bits (651), Expect = 1.990e-73
Identity = 144/361 (39.89%), Postives = 221/361 (61.22%), Query Frame = 3 
Query:   90 DFYVLLGVSKTATEKEINTAYKKLAMKYHPDRTRGDLEAAEKFKEIATAYAVLSDPNRRRQYDLSGGDEEAKGADYTPMDMEGIGSMGRVVGALIGKLGVPIQTSIAQSSLSEAYELCQNSGLNERNPRLLPMECGVEYKGTVEKQQSVFFMIHVTKDMARDGLVLRCTSTNKSRFKLVLFDNAGKARYQEESSSTSNHEGFTMCSLFFAPYEVSNVADTINIAG-LKGEEVPPIFHRLDLFQVTS-RQLEEGDHLVGVYGDNWLRAASFSLMAIPLSPRAKEEEASVVSVDAQLVSQREQLKAFKPEYLEAKAKWEATLGKLEELTAHTTELVRAREVVYDQLVGASLSAYAASDQAAAS 1166
            DFY +LGVSKTATE EI  AY+KLAM+YHPDR  GDLEA EKFK I+ AY+VLSDPNRRR+YD++G  +     ++  +D+  +GS+GR+ GA+  KLGVPI T+I   +L  A +L +    +   P L P   G     +++ Q + F++I + ++ A+ G+V+RC ST  S+FKLV+FD  G  R  +ES      +G T+  ++F P+  +N+ + I +   ++  + P  FH LD  QV     LE   HL+ V+GDN+L+ A   +  +P+ P   E   ++  ++ +L  ++E++  F+ EY++AKAKWEA   +L+       EL++ R+ +YDQL+  S   YA +D A+ S
Sbjct:   10 DFYEVLGVSKTATESEIKNAYRKLAMRYHPDRNPGDLEAQEKFKHISIAYSVLSDPNRRRKYDVTGPGKSLD--EFEGLDISELGSVGRIFGAMFSKLGVPIPTAINPKTLGTARDLVEKEFADV--PMLYP---GQTISDSIKTQDAKFYVIEMREEFAKHGVVIRCRSTANSKFKLVMFDREGGVRVIQESQKK---KGNTLAEIYFVPFTKNNLTEFIPMKFYMEDRDTPLTFHYLDSLQVQGGHTLEPRKHLIAVFGDNFLQEAKVKITFVPIGPYTDEIVGTIQELEPKLKKRKEEMSEFQREYMDAKAKWEAAKERLKREDLEIQELLKERDNLYDQLISESELVYAPTDVASTS 360
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig86.16687.1 vs. uniprot
Match: A0A6G0UWT9_9BILA (J domain-containing protein n=1 Tax=Halicephalobus sp. NKZ332 TaxID=2598192 RepID=A0A6G0UWT9_9BILA)

HSP 1 Score: 254 bits (650), Expect = 3.030e-73
Identity = 141/357 (39.50%), Postives = 217/357 (60.78%), Query Frame = 3 
Query:   75 NDPQVDFYVLLGVSKTATEKEINTAYKKLAMKYHPDRTRGDLEAAEKFKEIATAYAVLSDPNRRRQYDLSGGDEEAKGADYTPMDMEGIGSMGRVVGALIGKLGVPIQTSIAQSSLSEAYELCQNSGLNERNPRLLPMECGVEYKGTVEKQQSVFFMIHVTKDMARDGLVLRCTSTNKSRFKLVLFDNAGKARYQEESSSTSNHEGFTMCSLFFAPYEVSNVADTINIAG-LKGEEVPPIFHRLDLFQVTS-RQLEEGDHLVGVYGDNWLRAASFSLMAIPLSPRAKEEEASVVSVDAQLVSQREQLKAFKPEYLEAKAKWEATLGKLEELTAHTTELVRAREVVYDQLVGASLSAY 1139
            +D   DFY +LGV + ATE +I  AY+KLA+KYHPDR  GD++A E FK I+ AY+VLSDPNRRRQYD+SG       +D+  +D+  +GS+GR  GA+  KLGVPI T+++   LS A E  +        P L P    V    TV+ Q + FF+I +  +   +G+++RC S++ S+FKLVLFD  G  R  EES    +H   T+  LFF P+  +N+++ I +   ++  + P  FH LD  Q      LEE  HLVGVYGDN+L+   F +  +P++P + E  + + +++  L+ ++E +  F+ EY++ K +WEA   +L++  A  TE+++ R+ +Y++LV  S  A+
Sbjct:   11 SDTVTDFYEILGVPRNATESDIKNAYRKLALKYHPDRNPGDIQAQETFKRISIAYSVLSDPNRRRQYDVSGPGTSL--SDFDGIDISELGSVGRFFGAMFSKLGVPIPTTVSPKVLSNAREHTERQFAGV--PILQP---AVPVNETVKTQDAKFFVIDMKSEYQTNGIIIRCKSSSGSKFKLVLFDRDGAVRMMEESQKKKSH---TIADLFFVPFTKNNLSEFIPMKFYMEDRDTPISFHFLDALQAQGGHTLEERKHLVGVYGDNFLQEGKFKISFLPIAPHSTETVSKITTLEPDLLKKKEVMATFQQEYMDLKKRWEAAKERLKKEEAEVTEMLKQRDTIYEELVKESEVAF 357
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig86.16687.1 vs. uniprot
Match: A0A1I8CET9_9BILA (J domain-containing protein n=1 Tax=Rhabditophanes sp. KR3021 TaxID=114890 RepID=A0A1I8CET9_9BILA)

HSP 1 Score: 249 bits (637), Expect = 4.750e-71
Identity = 137/355 (38.59%), Postives = 213/355 (60.00%), Query Frame = 3 
Query:   87 VDFYVLLGVSKTATEKEINTAYKKLAMKYHPDRTRGDLEAAEKFKEIATAYAVLSDPNRRRQYDLSGGDEEAKGADYTPMDMEGIGSMGRVVGALIGKLGVPIQTSIAQSSLSEAYELCQNSGLNERNPRLLPMECGVEYKGTVEKQQSVFFMIHVTKDMARDGLVLRCTSTNKSRFKLVLFDNAGKARYQEESSSTSNHEGFTMCSLFFAPYEVSNVADTINIAGL---KGEEVPPIFHRLDLFQVTSR-QLEEGDHLVGVYGDNWLRAASFSLMAIPLSPRAKEEEASVVSVDAQLVSQREQLKAFKPEYLEAKAKWEATLGKLEELTAHTTELVRAREVVYDQLVGASLSAY 1139
            VD+Y LLGVSK++TE EI  AY+KLA+KYHPDR   +LEA E FK I+ AY+VLSDP+R+RQYD+SG  E A   D+  +D+  +G+ GR  GAL  KLGVPI T+I    L  A ++C N   +  +  L+P   G    G V KQ   F+   +T D+ + G+V+R TST+ S+FKL++FD  G  R  +ES      + +T   LF+ P++  ++++ + +      K +++P  FH LD  +   +  ++ GDH++ VYGDNW++  ++ +  +PL+   K     +  +++ L S+++++  F+ EY++ K KWEA   KL+   A   E ++ RE VYD+L  A    Y
Sbjct:   38 VDYYELLGVSKSSTENEIKNAYRKLALKYHPDRNPNNLEAQEMFKNISVAYSVLSDPSRKRQYDVSGPSENAM--DFDGIDISEVGNTGRFFGALFSKLGVPIPTTITPKILGTAKDICCNEAGSPDSKILMP---GTVQDGVVAKQDGDFYKFKMTPDLEKHGVVIRVTSTSMSKFKLIIFDKEGGVRQIQESQK---RKAYTSAELFYVPFKRVDISEFVPMKYYMEDKNKDIPIAFHYLDTLENQDQFPIKLGDHVICVYGDNWIQKVTYKVSFLPLNEGCKASVDEITGIESLLSSKKQEMSKFQNEYVDLKKKWEAAKAKLKAEDALIQENIKLREKVYDELYEACQRPY 384
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig86.16687.1 vs. uniprot
Match: A0A2K6WEX1_ONCVO (J domain-containing protein n=16 Tax=Onchocercidae TaxID=6296 RepID=A0A2K6WEX1_ONCVO)

HSP 1 Score: 243 bits (620), Expect = 4.980e-69
Identity = 143/375 (38.13%), Postives = 226/375 (60.27%), Query Frame = 3 
Query:   78 DPQVDFYVLLGVSKTATEKEINTAYKKLAMKYHPDRTRGDLEAAEKFKEIATAYAVLSDPNRRRQYDLSGGDEEAKGA--DYTPMDMEGIGSMGRVVGALIGKLGVPIQTSIAQSSLSEAYELCQNSGLNERNPRLLPMECGVEYKGTVEKQQSVFFMIHVTKDMARDGLVLRCTSTNKSRFKLVLFDNAGKARYQEESSSTSNHEGFTMCSLFFAPYEVSNVADTINIAG-LKGEEVPPIFHRLDLFQVT-SRQLEEGDHLVGVYGDNWLRAASFSLMAIPL--SPRAKEEEASVVSVDAQLVSQREQLKAFKPEYLEAKAKWEATLGKLEELTAHTTELVRAREVVYDQLVGASLSAYAASDQAAASTARRGV 1184
            D  +D+Y +LG+ K ATE++I  +Y+KLA+K+HPDR  GD +AAE+FK+I+ AYAVLSDPN+RRQYDLSG      GA  D+  +D+  +G +GRV GAL  KLGVPI T I    LS+A  LC+ +     + +   ++ G+ Y G+V KQ++ FF I +  +  R+GL++ C S   S+FKLVLFD  G  R  +ES+     +G T+  +FF P+  +N+++ I +   ++ +E P  FH LD  +V  +  LE  DH + VYGDNW++   + L  +PL  SP + E    + + +  L+ ++ ++  F+ EY EA  K++    +L+  T     L++ R+ VY+ L   S++ + AS   + S + +G+
Sbjct:    5 DTVIDYYEILGLEKNATEQQIKNSYRKLALKFHPDRNPGDQKAAEQFKKISIAYAVLSDPNKRRQYDLSG----PSGALVDFEGIDISEMGGLGRVFGALFSKLGVPIPTQIGPKVLSQARSLCEGT---PTDAKYTVLKEGIPYDGSVGKQEADFFKITMQSEWERNGLMIICRSMQMSKFKLVLFDKEGGVRIIQESNK---RKGCTVAEIFFVPFNRANLSEFIPMKFYMEDKETPLPFHLLDTLEVIGAHTLERRDHFLCVYGDNWIKDVRYQLKFVPLNDSPISVECVHDLTTTEETLIKKKSEMSKFQVEYTEAIKKYKEVTERLKNETEEINSLLKKRDHVYEALEKESMARFIASKHLSPSHSSKGL 369
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig86.16687.1 vs. uniprot
Match: A0A024FV35_9STRA (J domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FV35_9STRA)

HSP 1 Score: 241 bits (614), Expect = 6.650e-68
Identity = 138/350 (39.43%), Postives = 208/350 (59.43%), Query Frame = 3 
Query:   72 ENDPQVDFYVLLGVSKTATEKEINTAYKKLAMKYHPDRTRGDLEAAEKFKEIATAYAVLSDPNRRRQYDLSGGDEEAKGADYTPMDMEGIGSMGRVVGALIGKLGVPIQTSIAQSSLSEAYELCQNSGLNERNPRLLPMECGVEYKGTVEKQQSVFFMIHVTKDMARDGLVLRCTSTNKSRFKLVLFDNAGKARYQEESSSTSNHEGFTMCSLFFAPYEVSNVADTINIAGLKGEEVPPIFHRLDLFQVTSR-QLEEGDHLVGVYGDNWLRAASFSLMAIPLSPRAKEEEASVVSVDAQLVSQREQLKAFKPEYLEAKAKWEATLGKLEELTAHTTELVRAREVVYDQLV 1118
            E++   +FY  LGV ++A+E EI +AY+KLA+KYHPDR  G  EAA KFK+++TAYAVLSDPN+RRQYDLSG  E  KG +   +D+E +G  GR+VGAL  K+G+PI T I+QS LS A ++C           +  +  GVE    V+KQ + F+ IH+    A + LVL+C S +KS+FKLVLFD +G  R  +ES   + +    M           N     ++ G + +E+P +F +L  F+V     LE+G HL+ VYGDNWL A  +S+  + +   + +    +   +  LV ++E L + + EYL AK ++E  + ++EE   +T E++  RE  Y++ +
Sbjct:    6 ESEHHFNFYEELGVQRSASELEIKSAYRKLALKYHPDRNAGSEEAANKFKQVSTAYAVLSDPNKRRQYDLSG--ETGKGIEVESVDVEAMGGFGRMVGALFTKIGLPIPTQISQSVLSSARDICDERSNTSNKVHVTDLPFGVEKHSKVDKQDAHFYRIHLAA--ANESLVLKCRSMSKSKFKLVLFDQSGGVRLVQESVKKTRYTAADMYLTNSVELMDLNEMWPPHLNGHE-QELPEVFTKLTFFEVRRTISLEKGPHLICVYGDNWLSAVKYSVTCVKME-MSSQALRDIQETENTLVREKESLDSLQKEYLAAKKQYEDVVARVEEKQKYTDEVLAKREQAYEEFL 349
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig86.16687.1 vs. uniprot
Match: M4B3U8_HYAAE (J domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B3U8_HYAAE)

HSP 1 Score: 239 bits (611), Expect = 3.360e-67
Identity = 140/355 (39.44%), Postives = 208/355 (58.59%), Query Frame = 3 
Query:   48 MATPAQPLENDPQVDFYVLLGVSKTATEKEINTAYKKLAMKYHPDRTRGDLEAAEKFKEIATAYAVLSDPNRRRQYDLSGGDEEAKGADYTPMDMEGIGSMGRVVGALIGKLGVPIQTSIAQSSLSEAYELCQNSGLNERNPRLLPMECGVEYKGTVEKQQSVFFMIHVTKDMARDGLVLRCTSTNKSRFKLVLFDNAGKARYQEESSSTSNHEGFTMCSLFFAPYEVSNVADTINIAGLKGEEVPPIFHRLDLFQVTSR-QLEEGDHLVGVYGDNWLRAASFSLMAIPLSPRAKEEEASVVSVDAQLVSQREQLKAFKPEYLEAKAKWEATLGKLEELTAHTTELVRAREVVYD 1109
            M+ P      + +V+ Y +LGV K A+E EI TAY+KLA+KYHPDR  G +EAA+KFK+ + AYAVLSDPN+RRQYD++G  E  K   +  +D+E +G  GRVVGAL  K+G+PI T I+Q+ LS A +LC     + + P +  M  G+E    V+KQ + F+ +HV KD  R+ +V  C S +KS+FKLVLFD  G  R  +ESS  S      M     +  E+ ++   +        E+P IF +L +F+V     LE+G+HL  VYGDNWL A  +S+  + +  ++     ++   + +LV  +  L A + EY+ AK+ +E    ++E     T EL++ RE  Y+
Sbjct:    1 MSDPVPKQPEEERVNLYEILGVEKMASELEIKTAYRKLALKYHPDRNAGSIEAADKFKQASAAYAVLSDPNKRRQYDVAG--EGGKDMAFESVDVEAMGGFGRVVGALFTKIGMPIPTQISQTVLSGARDLCDARNNSTQLPSVTQMVFGMERHAKVDKQDAHFYKLHVDKD--RESVVFMCRSASKSKFKLVLFDQHGAVRMVQESSKKSRCTAADM--YLSSNVELMDLNPELWPGATTDSELPEIFSKLTMFEVRRTVPLEKGEHLFCVYGDNWLSAVKYSIKCLKIDEQSPALR-TIQQTERELVGIKHDLDALQREYVAAKSAFEKVCARVEAKQMRTEELLQDREQSYE 348
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig86.16687.1 vs. uniprot
Match: A0A2D4BJI7_PYTIN (J domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJI7_PYTIN)

HSP 1 Score: 238 bits (608), Expect = 9.960e-67
Identity = 143/358 (39.94%), Postives = 211/358 (58.94%), Query Frame = 3 
Query:   54 TPAQPLENDPQVDFYVLLGVSKTATEKEINTAYKKLAMKYHPDRTRGDLEAAEKFKEIATAYAVLSDPNRRRQYDLSGGDEEAKGADYTPMDMEGIGSMGRVVGALIGKLGVPIQTSIAQSSLSEAYELCQNSGLNERNPRLLPMECGVEYKGTVEKQQSVFFMIHVTKDMARDGLVLRCTSTNKSRFKLVLFDNAGKARYQEESSSTSNHEGFTMCSLFFAPYEVSNVADT--INIAGLKGEEVPPIFHRLDLFQVTSRQ-LEEGDHLVGVYGDNWLRAASFSLMAIPLSPRAKEEEASVVSVDAQLVSQREQLKAFKPEYLEAKAKWEATLGKLEELTAHTTELVRAREVVYDQLV 1118
            +P +P +     ++Y +LGV KTA+E EI +AY+KLA+KYHPDR  G+ EAA+KFK+++TAYAVLSDPN+RRQYD++G  E  K A++  +D+E +G  GRVVGAL  K+G+PI T I+QS LS A +LC           +  +  GVE    V+KQ + F+   V ++  R+ +VL C S  KS+FKLVLFD +G  R  +ES          M     A  E+ ++ D    ++AG    E+P +F +L  F+V     LE+G+HL  VYGDNWL A  +S+  + + P+A      +   +  LV  +++L   + E+L AK  +E  + K+E     T EL+ ARE  Y+  +
Sbjct:    9 SPRRPRKPAETFNYYEVLGVEKTASELEIKSAYRKLALKYHPDRNAGNAEAADKFKQVSTAYAVLSDPNKRRQYDVAG--ESGKDAEFESVDVEAMGGFGRVVGALFTKIGLPIPTQISQSVLSAARDLCDERNHATHKVPVTALPFGVERHARVDKQDAHFYRFTVEEE--RESVVLMCRSATKSKFKLVLFDASGAVRVVQESIKKPRCTAADM--YLSASVELMDLHDIWPAHLAG-NDTELPELFTKLATFEVKRTVVLEKGEHLFCVYGDNWLSAVKYSIKCLKIDPKAPGLRI-IQDHERDLVGIKQELDGLQKEFLAAKKAFEEAVAKVETTQKRTDELLAARETAYESFL 358
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig86.16687.1 vs. uniprot
Match: A0A8K1C4H2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4H2_PYTOL)

HSP 1 Score: 236 bits (603), Expect = 4.930e-66
Identity = 147/364 (40.38%), Postives = 219/364 (60.16%), Query Frame = 3 
Query:   51 ATPAQPLENDPQVDFYVLLGVSKTATEKEINTAYKKLAMKYHPDRTRGDLEAAEKFKEIATAYAVLSDPNRRRQYDLSGGDEEAKGADYTPMDMEGIGSMGRVVGALIGKLGVPIQTSIAQSSLSEAYELC-QNSGLNERNPRLLPMECGVEYKGTVEKQQSVFFMIHVTKDMARDGLVLRCTSTNKSRFKLVLFDNAGKARYQEESSSTSNHEGFTMCSLFFAP-YEVSNVADTI--NIAGLKGEEVPPIFHRLDLFQVTSR-QLEEGDHLVGVYGDNWLRAASFSLMAIPLSPRAKEEEASVVSVDAQLVSQREQLKAFKPEYLEAKAKWEATLGKLEELTAHTTELVRAREVVYDQLVGAS 1127
            ATPA         ++Y +LGV KTA+E EI TAY+KLA+KYHPDR  G+ EA++KFK+++TAYAVLSDPN+RRQYD++G  E  K  ++  +D+E +G  GRVVGAL  K+G+PI T I+QS L+ A +LC + S   ++ P +  M  G E    VEKQ + F+   V +D  R+ +VL C S +KS+FKLVLFD +G  R  +ES+  S     T   +F +   E+ ++ +    +++G    E+P +F +L  F+V     LE+GDHL  VYGDNWL    +S+  + + P++      +   + +LV  + +L   + EYL AK  +E   G+++     T +L+ ARE  YDQ +  S
Sbjct:    8 ATPADTF------NYYQVLGVEKTASELEIKTAYRKLALKYHPDRNAGNEEASDKFKQVSTAYAVLSDPNKRRQYDVAG--ETGKDMEFESVDVESMGGFGRVVGALFTKIGLPIPTQISQSVLTAARDLCDERSNATQKEP-VTAMSYGSERHARVEKQGAHFYRFTVEED--RESVVLMCRSASKSKFKLVLFDASGGVRMVQESAKRSK---CTAADMFLSSSIELMDLHEMWPPHLSG-SDSELPELFTKLSTFEVKRTIVLEKGDHLFCVYGDNWLSQVRYSIKVLKIDPKSTGLR-EIQDHERELVGIKLELDTLQKEYLAAKKAFEEVAGRVDATQKRTDDLLVAREAAYDQFLAGS 355
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig86.16687.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L474_9PHAE7.450e-27697.25J domain-containing protein n=2 Tax=Ectocarpus Tax... [more]
A0A835ZFM4_9STRA5.690e-10349.86Heat shock protein 40 like protein/ DnaJ domain-co... [more]
A0A7E4W0I8_PANRE1.990e-7339.89J domain-containing protein n=2 Tax=Panagrellus re... [more]
A0A6G0UWT9_9BILA3.030e-7339.50J domain-containing protein n=1 Tax=Halicephalobus... [more]
A0A1I8CET9_9BILA4.750e-7138.59J domain-containing protein n=1 Tax=Rhabditophanes... [more]
A0A2K6WEX1_ONCVO4.980e-6938.13J domain-containing protein n=16 Tax=Onchocercidae... [more]
A0A024FV35_9STRA6.650e-6839.43J domain-containing protein n=1 Tax=Albugo candida... [more]
M4B3U8_HYAAE3.360e-6739.44J domain-containing protein n=1 Tax=Hyaloperonospo... [more]
A0A2D4BJI7_PYTIN9.960e-6739.94J domain-containing protein n=1 Tax=Pythium insidi... [more]
A0A8K1C4H2_PYTOL4.930e-6640.38Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig86contigE-siliculosus-1a_M_contig86:582729..591760 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1275
Model size2638
Exons10
Ec32 orthologEc-27_002540.1
Ec32 ortholog descriptionHeat shock protein 40 like protein/ DnaJ domain containing protein
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.O
EggNOG OGsCOG0484@1,KOG0713@2759
EggNOG free text desc.protein folding
GOsGO:0001101,GO:0003674,GO:0005488,GO:0005515,GO:0008092,GO:0008150,GO:0009605,GO:0009606,GO:0009628,GO:0009629,GO:0009630,GO:0009719,GO:0009725,GO:0009737,GO:0009958,GO:0010033,GO:0033993,GO:0042221,GO:0050896,GO:0097305,GO:1901700
Seed eggNOG ortholog2880.D8LLG4
Seed ortholog evalue6.4e-219
Seed ortholog score766.5
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig86.16687.1prot_E-siliculosus-1a_M_contig86.16687.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig86 582776..590444 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936318.6539536-UTR-E-siliculosus-1a_M_contig86:582728..5827751622936318.6539536-UTR-E-siliculosus-1a_M_contig86:582728..582775Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig86 582729..582775 +
1696251023.064045-UTR-E-siliculosus-1a_M_contig86:582728..5827751696251023.064045-UTR-E-siliculosus-1a_M_contig86:582728..582775Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig86 582729..582775 +
1622936318.8961694-UTR-E-siliculosus-1a_M_contig86:590444..5917601622936318.8961694-UTR-E-siliculosus-1a_M_contig86:590444..591760Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig86 590445..591760 +
1696251023.207247-UTR-E-siliculosus-1a_M_contig86:590444..5917601696251023.207247-UTR-E-siliculosus-1a_M_contig86:590444..591760Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig86 590445..591760 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936318.6734262-CDS-E-siliculosus-1a_M_contig86:582775..5828381622936318.6734262-CDS-E-siliculosus-1a_M_contig86:582775..582838Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig86 582776..582838 +
1696251023.0822072-CDS-E-siliculosus-1a_M_contig86:582775..5828381696251023.0822072-CDS-E-siliculosus-1a_M_contig86:582775..582838Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig86 582776..582838 +
1622936318.6874661-CDS-E-siliculosus-1a_M_contig86:583758..5838901622936318.6874661-CDS-E-siliculosus-1a_M_contig86:583758..583890Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig86 583759..583890 +
1696251023.0978658-CDS-E-siliculosus-1a_M_contig86:583758..5838901696251023.0978658-CDS-E-siliculosus-1a_M_contig86:583758..583890Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig86 583759..583890 +
1622936318.7462792-CDS-E-siliculosus-1a_M_contig86:585025..5851351622936318.7462792-CDS-E-siliculosus-1a_M_contig86:585025..585135Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig86 585026..585135 +
1696251023.109164-CDS-E-siliculosus-1a_M_contig86:585025..5851351696251023.109164-CDS-E-siliculosus-1a_M_contig86:585025..585135Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig86 585026..585135 +
1622936318.7656841-CDS-E-siliculosus-1a_M_contig86:586118..5862751622936318.7656841-CDS-E-siliculosus-1a_M_contig86:586118..586275Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig86 586119..586275 +
1696251023.119918-CDS-E-siliculosus-1a_M_contig86:586118..5862751696251023.119918-CDS-E-siliculosus-1a_M_contig86:586118..586275Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig86 586119..586275 +
1622936318.7817473-CDS-E-siliculosus-1a_M_contig86:586917..5870341622936318.7817473-CDS-E-siliculosus-1a_M_contig86:586917..587034Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig86 586918..587034 +
1696251023.13423-CDS-E-siliculosus-1a_M_contig86:586917..5870341696251023.13423-CDS-E-siliculosus-1a_M_contig86:586917..587034Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig86 586918..587034 +
1622936318.801048-CDS-E-siliculosus-1a_M_contig86:587543..5876451622936318.801048-CDS-E-siliculosus-1a_M_contig86:587543..587645Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig86 587544..587645 +
1696251023.1522992-CDS-E-siliculosus-1a_M_contig86:587543..5876451696251023.1522992-CDS-E-siliculosus-1a_M_contig86:587543..587645Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig86 587544..587645 +
1622936318.8192778-CDS-E-siliculosus-1a_M_contig86:588002..5880971622936318.8192778-CDS-E-siliculosus-1a_M_contig86:588002..588097Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig86 588003..588097 +
1696251023.1639187-CDS-E-siliculosus-1a_M_contig86:588002..5880971696251023.1639187-CDS-E-siliculosus-1a_M_contig86:588002..588097Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig86 588003..588097 +
1622936318.8335357-CDS-E-siliculosus-1a_M_contig86:588481..5886591622936318.8335357-CDS-E-siliculosus-1a_M_contig86:588481..588659Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig86 588482..588659 +
1696251023.1745543-CDS-E-siliculosus-1a_M_contig86:588481..5886591696251023.1745543-CDS-E-siliculosus-1a_M_contig86:588481..588659Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig86 588482..588659 +
1622936318.8584864-CDS-E-siliculosus-1a_M_contig86:589454..5896271622936318.8584864-CDS-E-siliculosus-1a_M_contig86:589454..589627Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig86 589455..589627 +
1696251023.1858647-CDS-E-siliculosus-1a_M_contig86:589454..5896271696251023.1858647-CDS-E-siliculosus-1a_M_contig86:589454..589627Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig86 589455..589627 +
1622936318.8751254-CDS-E-siliculosus-1a_M_contig86:590296..5904441622936318.8751254-CDS-E-siliculosus-1a_M_contig86:590296..590444Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig86 590297..590444 +
1696251023.1968114-CDS-E-siliculosus-1a_M_contig86:590296..5904441696251023.1968114-CDS-E-siliculosus-1a_M_contig86:590296..590444Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig86 590297..590444 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig86.16687.1

>prot_E-siliculosus-1a_M_contig86.16687.1 ID=prot_E-siliculosus-1a_M_contig86.16687.1|Name=mRNA_E-siliculosus-1a_M_contig86.16687.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=425bp
MATPAQPLENDPQVDFYVLLGVSKTATEKEINTAYKKLAMKYHPDRTRGD
LEAAEKFKEIATAYAVLSDPNRRRQYDLSGGDEEAKGADYTPMDMEGIGS
MGRVVGALIGKLGVPIQTSIAQSSLSEAYELCQNSGLNERNPRLLPMECG
VEYKGTVEKQQSVFFMIHVTKDMARDGLVLRCTSTNKSRFKLVLFDNAGK
ARYQEESSSTSNHEGFTMCSLFFAPYEVSNVADTINIAGLKGEEVPPIFH
RLDLFQVTSRQLEEGDHLVGVYGDNWLRAASFSLMAIPLSPRAKEEEASV
VSVDAQLVSQREQLKAFKPEYLEAKAKWEATLGKLEELTAHTTELVRARE
VVYDQLVGASLSAYAASDQAAASTARRGVPANGSVGSAVNVNHALKKRRG
AAASSSQGGGGGGGGGGGLFGRLF*
back to top

mRNA from alignment at E-siliculosus-1a_M_contig86:582729..591760+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig86.16687.1 ID=mRNA_E-siliculosus-1a_M_contig86.16687.1|Name=mRNA_E-siliculosus-1a_M_contig86.16687.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=9032bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig86:582729..591760+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CCCACAGAAGACTCGGGACTCAGCAGCACCTCAAGCAGAGGTCAAAGATG
GCAACCCCTGCTCAACCTCTCGAGAATGATCCTCAGGTGGACTTCTACGT
CCTTCTGGGGGTGAGTCGGTTCTGCTCACGAAGTTATTCTATCTCACAGC
AGGAGTAGTCTTCGAGAGTTCGCAGCAGCAATCAAATCCCACCGCCGCCT
TGTGGAACAAACAGAGAGGAATTTACTTAGCTTTTGGAGCTTTGCCGTCG
TGCAAGGCTGTGCGAATTGCACGGGTTATTCGAGGGTGTAGTCGGCGAGG
TGCACGCGAACTGGTTATTTTATCCGGAGGTGTGAATCATCGTAGATTAC
TCCAAAGCTACATGTAGTCCAGCTGGGTGGTTCAATGATCACACGATATT
CCGAGAACGAGCGGGAAACGGGCGCGAGAGAGGTGTTTGACTGTTTCACA
GAGACGACGATTGCAGATGTACAATGCGTGTTGTCTCTTGATCGTCAACA
TGGTATGCGCGGTCGCATTTCCTGCTTGTCCCAACCCCAGCCCGGCAGAG
ATGCCACTAGCATTCCACAGCAGTTGCACTATTTAGGCGTATAAGTCTGC
ATACACGAGGCACTACAACGGCGGTAGTTTTTGCAGGTCATGTACGTGGT
GTACAGCAGTATGGACTTGACTTGCACTCACACTACTGCTGTATTTGTCC
TGAGAAGATACTCCTTTCTGATCATATGCATGTAAATAGCAGCAATTCGT
GGTGCTCCCATCCGCGATGTGGCATGGACTTGCCATGCGATGTGCAAATT
GTGCAACGATGCAACGCGCTTTTGGAAACTCAAACTTACTGCATGTAGCA
CCTTGGCTCAGCACTCTTCGGAGGGATTCCCATCCCCAATCATTGCCAGC
GGTCCTTCGAGAACACAACACACGACCAATCGTTCGAGATCATACCCCAG
CCTTGTCATGCTTTCAATTGACCCCCCATCAACGCATCCCCCAAGTTTAA
CAACAACAACGACCACCAACAAACTCTCAGGTGTCGAAAACTGCAACGGA
GAAGGAGATCAACACCGCCTACAAGAAGCTGGCGATGAAGTACCACCCCG
ACCGCACCCGCGGGGACCTGGAGGCCGCGGAAAAGTTCAAGGAGATCGCT
ACCGCCTATGCGGTACGTGCATACATACATGGGTTTATCACGCAAGCAGG
GAGCCTAGACTGGATGTGTGCTTCATCATAGAGCGTACTTGGTTTATTTC
CTGGTAATTCATCATAGAGCGTACTTGATTTATCCTGGGAACGCTACAAC
TTTCGTGTTGGGTCAGAGCGTGACATACGACAGTACCAAAACCTTCGTTC
CCGAAACAAAACAAACGACGCAAAGCAAAATACGTCGAAGTCTATTGGGT
AAGTTAACCTGTGACCACGGGAATCGATCGGTCAAGAGTTTGATCAGTTC
GGAACGTTTTTTTAATATGAAAACAACAGCAACAACGACAACACAGAGGC
TTTGCTGTGCGATCCGACCCGAACCGATGGCGGCAGCATGGAATGACGGT
ATATATCACCCCCCCCGTCAAGAGGAGGCGCATCATGTAGAACCGCATCG
CTCGCTCTGTTCAAAACCGAACATGGAGCTGTTGTTGTGTCCATTCGCGT
ACATGTCCCTGAAGAAAGAGAGCCACATCCCCTAAGTCTTTTTGTGGCAC
CGAAATCAGATATATCACAGCGACACTAATGTGACAAGAGGGAATCGTTC
TCGACGACGTGGGGGAGATGCGACCCTTGTTACAGGTTACCTCCACATAT
GCTGTTGCTGTTGCTTTGCAGCTGTTTGTTCCAGCAGTCTGCATGCCTTG
TTCCTTTTTTCTTTTTTCGAGGTGGTTTTGTTGAAGTCCAAACCCGAGCA
AGCGTAACCCAAAGCGCGGCGACACCGTACACACGTCCTCTTGTGTTACC
GCCTCCCCCAGACTCTGTTCGGACAACGATGTTGCCATCACCGCTGCCTT
GCATTGCCGAACTGCTGGCCTCTCTTCGGTGTCCGTTTGTTGCTCTTGGT
GCTGCTATTTGATCACACGAACCATCTGTGGCTTGGCTAATGCTGACGCC
TGCTCTTGATTCTGTCGTCCACTTCAGATTGTTTGATGTGCTGCCGCTGC
AGCTTCTGTTCGGCAGTTGGTGACATCAATGACGGCTTGGCATGGGCATG
CTTTCGTCTTTGTCAACACCCCCCCACCCCCCCCTGTCCAATGCTGTGGT
TGTTGCTCTTTCTGTGGTCGTGTTTTTTGTCCGAAACCGGATTGCAGGTG
TTATCCGATCCGAATCGCCGTCGCCAGTACGACTTGTCTGGGGGCGACGA
GGAGGCCAAGGGGGCGGACTACACCCCCATGGACATGGAGGGCATCGGGA
GCATGGGGTGAGTGAGGCATGATGCCATGACTAGAAGCAAGTCAAGGCCC
CACCGACTCCTCTTTGGTGTTCCTCGTGTAATAGGAGTACGAGGTGTGCG
ACGAGAGAGACGTCCCGAGAGAGAACAGAGAGAGAACAGACAGACAGACA
AGACAGGGAGAGAGAGATAGAGAGAGACATGCAGAGAGAGAGAGAGAGAG
AGAGACAGAGAGACAGAGAGACAGATAAGAGACGTATGGCGCTCACGCCC
TTTTGGGTGCTGGTACTGGTGGTCCGCAGTACCTCGGGTCTCAAGTATGC
ACGTGCGTAGCACTTTACGTGTGCGGCACAAAGAGTGGTCTGGCAGTCCC
CATCGTACGTACGCCCGTGACCGGTGTGCTTGGCGTGCGACATCGCTTCT
CCTTGCCCATGGTGCTTACAACGATTCTTTTTTCATGCACCTGGCGTGGT
TTGTGGACAAATGAGGGAAATTCTATTGGTGTGCCCGTTGTGTTTTTCGG
CGGGCACGGCAATGCAACCCTACCATCAAAGCATTGCACTCATGCCACCG
TCAACGTCCTTGTGGTTTTTGGTATCAGCAACAGGTTGTAAACCACTCCC
AGCTTTAGGAGGAATGCGAAGTCAGCAGAAAAAACGCCACGGCATGCGTA
TCTACGGGTACCTCCCCCCCTAATCCCTTTCCAACCCCACATGCCCCCTC
CTTACCTTCCTCTTTCGCTTCCTCATCAATGTTGACGGCACACACCGACC
ACACGTGAAACTAATCCATTTTTATTTGATTTTTTATTTTCTTCTTTTTC
GTGGTTGTTAAGTGACGACGAAAAGCACACGCTGCCCCGCTTGAACGTAC
TACGCGCGTTTTCTTTTCCTTCTCTTTTTTTTTCGTGGTGGTTGGATAGA
GAGACCAAACACACCGCCCGCGTGATACTCAACTCGTATTTTGTTCCTAT
GTTGTTATTTTGTCTCGGATGTTTGGTTCGGGTGCCGCAGGAGAGTCGTG
GGTGCCCTCATCGGCAAGCTCGGAGTGCCCATCCAGACGTCCATCGCACA
GTCCAGCCTGTCGGAGGCCTACGAGCTGTGCCAGAACTCGGGGCTCAACG
AGCGGAACCCGCGGCTGCTGCCCATGGAGTGTGGCGTGGAATACAAGGTG
CGCCCGCCATGATACAAGTCTGCACGAAGTTCTTCCTCTTCCTTGAAGAC
GAAAGAAAAATAAGCTCATTCGAAAGCAGCTTTCGCTCGATGTATATGTA
TGGTAACACGGCAGATCTTTCCTGATTGATCTGCCGATGTGTTGACGGTT
AGATAGCACGCCTCAGTTTTCCCTCCACCCTTGAGTCGTCCCGGTCGGGC
TCAGCGAGTTGAAACGGTGCACTAGAGACGCATGCGCGCGCGCGGGGGGT
AGGGCGGCGAATTGTTTTTCGTGCATGGGCTGTGGGGAGTTTGGGGAGTT
GGTTGAGTTGGCCGTGATGGGACCACAATCCGCGGCTGCTTTTTGCTGCC
CAAGAAGTACGGGAGGGGTGGGGGTGGGGCGGAGGCTTGTTGCGGCTCGG
GCCAGAAAATGTAGTCGGTGTCAGCTCTCTCAATGGAAGTTGCCTTGATG
AATTTTAGAGTTGCGGGCATTCGACGTGTGCGTACCACTCACCCCCCACA
CGACCACAGCAGTATGTTGCCGCAGCATGCATGGTGCATGCCATTTCTGA
TGCAACAAAGTAGAGATAATTTGTCCGCCATGCACCGACCTCCCCCCCCT
GccccCCCCCCCCGCTCGCGTTCGCGCCTTTGCCCACAGGGTACGGTGGA
GAAGCAGCAGAGCGTGTTCTTCATGATCCACGTGACGAAAGACATGGCGA
GGGACGGCCTTGTGCTGCGATGCACGTCCACGAACAAGAGCCGTTTCAAG
CTTGTGGTGAGTTATCGTGGTAGAGTCGGCACGACGTGTAGATGTGGCGC
GCTCGCTCTTCACACAGCAGTACCAGCAGCAGCAGCAGGAACAGGCCGTC
CCTGTACGAGTTTGTTCAGCCCTTTCACGAAGCTTGTTTATTTTCAGTGT
CGAGCCTAGCATCCGGCAAACATTTTGCCGGCCAAAACTAAGACAACTTT
CGTAACACTATTGGTGACCATTCCAAGCGTTTTTTTTTTTTGTGCCGTGT
CGCCTCCTGGTGTACAGCAGTACCCCGCTATGTATGCCGCCGTGGTTTGG
TGTGTACTTTCAGCACGATTCTATTCCGTCTCTCAATGCTGAGAGTTGCT
CTACCCGTTTTCCTAAACATTTAACGTTTCCACATGGCACATCCACCAAC
AAGGCCTGAAATCTATTTGACATGTTTCCGTTCGGAATCCAAGTGTGAGT
GAACGTTTGAGCTCCCCTCCCCCCTCCCCTCTTTTCACGCTTGTTTTTGT
GTGTGTGTTTTAAAGCTTTTCGACAACGCCGGCAAGGCAAGGTATCAGGA
GGAGAGCAGCTCCACCTCCAACCACGAGGGCTTCACCATGTGCTCGCTCT
TCTTTGCGCCGTATGAGGTAAGTTTACCGCGTGAGCGGGTGCGCGGCCAG
CCGTATGCTTGTTGCGTATTTATTTTGCCTTGATTTTTTTGTTTCCTGCC
CGGCTTGGCACTGGTGTGGAGTGCTCTCGGTTCAGAAAAAATTTCGCCAC
CGACTGTGGTGCGGGTAATATTTCAGTGATTTGCATGTACATTTTGTTTG
TTGACTACGTACTTATGTTTTTTCCGTTCTCGGTGTGTTTGAGCTTCTCG
ACCACCCCAATTGTGGTTGTCGGCGAACGCGTGTATCATATCGGTGTGTG
GTGCGTTGTGTCTTGTGCGTGTATTGTACTTCCATTGTATTGTACTCATT
GTATTATATTATTTTGCATTGTAGGTGAGCAACGTTGCGGACACGATCAA
CATCGCGGGACTCAAGGGGGAGGAGGTACCCCCTATCTTCCACCGATTGG
ATCTTTTCCAGGTTACGAGGTGAGGGATTGATGAGACTAATGGTAAGAGA
CACACTGAGGGAGGGAGAGACAGGCAGCCGGAGGGAGAGGGGGGGAGAGA
GACCTAGAGAGACACACAAGAGAGAGGGAGACAGGCAGACAGAGAGGCGC
AGAGAGAGAGAGAGATTTTCCAACGCTGCTTCTGCCTCCTGTTGCACCTT
GCTGCCCCTGTTGTACCCCTGCTGACGCTCACACACAACACGACGATGGC
CGTAATAACTTTTCCAACCGTACTGAAACTGAAACTGACGTGTCCCTTCA
TTGGTCAGCCGGTTGCTAGCGCCGTCGATGCTAGTAATCGACACGCTCAC
AGAACGACACGCGTCCACCCCCGCGTCGTGGCAATCCGCACCATCGAACG
CAGCCGACAACTGGAGGAGGGCGACCACCTCGTGGGCGTCTACGGGGACA
ACTGGCTGAGGGCGGCGTCGTTCAGCCTGATGGCGATACCCCTCAGCCCC
AGGGCGAAGGAAGAGGAGGCCTCGGTGGTCAGCGTCGACGCGCAGCTCGT
GTCGCAGAGAGAACAGCTGAAGGCGTTCAAGGTGTGTGTGTGTGTCTTTG
TTATTAGCATCGACCGCTGTGTGTGTGTGCTTGTTCGAGGTTCTGGACTG
CCTACGCAAAGAAGATAAGGGAGCTACGAAAAAATGTCAGGCAGGGGGCA
CGCAGACCGTATAGCAATCCTACCCCTAGCCCTAATCCCAAGCCCAACTT
AGCCGATGTTTGCTTACTTACAAAAAGCTGCTGAGGCTTCTTCGGAATAA
AGGCATAGGCTGTTTCAACTTTTCGGGTTTTTTTTTGTGTGGGTTTCTGC
AGCCGATCTACCGTATTCGGCCGCCTGATTTGTCTTGCTCCTTGGGGAAG
GGGGACACGTAGCTTGTTTGGTGTTGTAGCGCATGTTTGACGCATGGACG
TTCGCCAGACGTGGCCCGTTTCCACCGGAGCCCTGGTTTGCGTGCATTCC
CTTGTTTGGCCTGGGCACCCCCCCCCGTCACTGGGCGTGGCGTAGGGGCG
TACGTTTTGCTCACCCTTCCTCCTCGCCCTCCCTCTTGGTTGCACGTACA
GTCGTGTCTCTTTGCTCCTGTCTCTCTTGCAGTCTGTATTGTCTGTCTGT
CTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTCTCTGTCTGTCTCTCT
CTCTCTCTCGCTCTCTTTCACTCTGGCTGCCTTTGTGCTTTGTTGGTGTA
TCTGTCTGCCTCTGTCCCTCCCTTGGTGTGTCTGTTTATCTCTTTATCTT
CCTCCCTTTTATCTCTCGCGAACGCTGCAACTGCTTACCACCATCCGCTT
TTGCTATATACCCACGCTCGCTGCAGCCGGAGTATCTAGAGGCGAAGGCG
AAGTGGGAGGCGACCCTCGGGAAGCTGGAGGAGCTGACGGCCCACACGAC
GGAGCTCGTGAGGGCGAGGGAGGTGGTCTACGACCAGCTCGTGGGGGCGT
CTCTCTCGGCGTACGCAGCCTCGGACCAGGCGGCGGCGTCAACCGCAAGG
TGATTGATCACAAGATGCTCACTCATGTGGTCCAGTCCATGTAGTTCTTT
TTTTGGCACGTGTCGTGCAAACGATTGTTTGACAGACAAGGGAAAGCGTA
CTCTCGTAGTTTTTTTTTCTTTCCGCTTCCGCCCAATTGATTTGATTGTG
GCGTTTTTTGTGCACGAAGAGGTGCGGGTTTACGTTTTACCGCTTGACGG
GTGTGTAGGGTGTGTAGAACATGAGTTTTTTTTTTTGTTGGTCTGCCGCA
AGAGCGCGTGTGTGTGGGCCATCGTTGTTATCGGCAACCCCAATTTCTCC
CCCCCGGTGATGAATGAGCCAGCTCTGCCACAAAACGATGAAAACGCAAA
ACGCCGGGATTGAAGCAGTTTCTATCCCCAAAAAAGAACAAGTGGTTTGT
GAGGCAGATGCGATGCGTACGTGAGGTTCGCATCTCTTGCTGTTGCGACC
TGTTTTTTTTTCTTTGTGGCACACGGAGCCCCCTTTGTTTGGCGCACACC
GAATCAAACCCTTGGTTCCGCCGCTGATTGCCCCAACCTGCAGTATCAGC
TATCTGTCAAGCTTCTTGTGCTTACTTTTTACCTTCTTCGTTCGTTCTCT
CACTCCCCCGTTCCTCCTTgcccCCCCCCCCCTCCCCCACTCTCCGCCCC
CCCCCAACTTATCCGCAGGCGAGGGGTTCCGGCGAATGGGTCGGTTGGGT
CCGCGGTAAACGTAAACCACGCCTTGAAGAAGAGAAGAGGGGCGGCGGCG
TCTTCGTCACAAGGGGGCGGTGGAGGGGGAGGAGGCGGCGGAGGGTTGTT
TGGGCGGCTCTTTTGAGGTCTTGTCCGGGCCGTGTGAATAATTTTTACTC
CCACAACAACAAAACATCCAGACGAAAATCACGAAAAAATGAGTACCATT
AAACAGAAAAATAGACTGGGTGTAGGGGGCTGGCATTTCTTGTTGTTGTT
GTCGCGGGTTGTGGTTTCGACAGCCATTTTTCTTTCGAACACACCGAAAG
AGCAACCCTGTGTCAGCGCGAGATGGTTGGGAAGTTTTGGGGCCGGCTGT
TTTGTTTCTTGCTGAACCTGCTTGTATTTGCGTTCGACGCCATGTTTTGC
GGCATGGCGTATTTCTTTTCTTTTTCTCATCCCGGTCTTGTAGCGCAGCT
TTTTTTTTTTAGGAATGCGGTGCGTGTGTCGGTGTATGTTGCGGCGATTT
GAGGTTTCGGTGTATGCCAAAGCCGTGTAGTAGATTTCTACTGTGGAAGG
TTGATATTTGTGCGGAGTTATTGATCTCGATTTGGCCGTGGTTGTGTAAT
TTTTGCCAGGCTTCCGCATTTGTGTTGCGGCACGAACCTTCATTGGCGAG
GGTAGTCTATTGCTGGGTTCTTCGTGATACGGTCTCTTCTTGGTTTGGGT
GCATGTTGCGAGTAGGTTGGGCTGACGCGATTTTGAAGGCAGAAATCGAA
CCCTACTCCTATGCGCATGGTTTGTCTTCTTGGTCCCTTTCCCCTGTGAA
GGAGAGAGCAGCAGCCAAGGCGTGAAGGTTTCACGTGTGATACATGGTGA
ATAATCCGGACACAGCCGACTTTTCTCAGTTTAGGCAGAATTCAAAGCGA
TGGTATTTCGCCTGTATCTCGATATAGCCCATGTTGCTCTTCCTCTCTCT
CACCGAACGTGGGTCGTCCGTGCGTTGATCGCGCGCGATTCTCTAGTCAC
GAAAGAGTTTTCACGCCCCGAAAAGGCAGGTTGGGCTACTACTGCTGCTG
TAGCGCCGTCTAACTCATGTCGCGTTGTTGAAAACAGTCAACTCTTGCGG
GTCTCTGTTGTCGCTTACTATTGACGGAGAGTGACGGCGTGCCGGGTAAA
CCTCGTTGGGGGCGCGTGGTCAAACGGGCGTTGGCACCCTTCCCGTCCTT
CCGGCTGGATTGCTGTGGTGTGTTTCGCCGAGATCCCTCTCTCGTTCGTC
GCGCTAATACAACCCATGTAGCACTTTTCCCAAGGTGAGGTTGTGCTGTT
GTTGCCCCTACCAACGGTGAAGCGCGGGCTTCTTGTACGCTACACATACA
GCCGGCAGATCATGTCTTTGGATTATCCCACGTGAGTACGTGGCATCTAT
GAAACAACGTGAGGCCGACTCTTGTACCGTAC
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig86:582729..591760+

>mRNA_E-siliculosus-1a_M_contig86.16687.1 ID=mRNA_E-siliculosus-1a_M_contig86.16687.1|Name=mRNA_E-siliculosus-1a_M_contig86.16687.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2550bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig86:582729..591760+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGCAACCCCTGCTCAACCTCTCGAGAATGATCCTCAGGTGGACTTCTA
CGTCCTTCTGGGGATGGCAACCCCTGCTCAACCTCTCGAGAATGATCCTC
AGGTGGACTTCTACGTCCTTCTGGGGGTGTCGAAAACTGCAACGGAGAAG
GAGATCAACACCGCCTACAAGAAGCTGGCGATGAAGTACCACCCCGACCG
CACCCGCGGGGACCTGGAGGCCGCGGAAAAGTTCAAGGAGATCGCTACCG
CCTATGCGGTGTCGAAAACTGCAACGGAGAAGGAGATCAACACCGCCTAC
AAGAAGCTGGCGATGAAGTACCACCCCGACCGCACCCGCGGGGACCTGGA
GGCCGCGGAAAAGTTCAAGGAGATCGCTACCGCCTATGCGGTGTTATCCG
ATCCGAATCGCCGTCGCCAGTACGACTTGTCTGGGGGCGACGAGGAGGCC
AAGGGGGCGGACTACACCCCCATGGACATGGAGGGCATCGGGAGCATGGG
GTGTTATCCGATCCGAATCGCCGTCGCCAGTACGACTTGTCTGGGGGCGA
CGAGGAGGCCAAGGGGGCGGACTACACCCCCATGGACATGGAGGGCATCG
GGAGCATGGGGAGAGTCGTGGGTGCCCTCATCGGCAAGCTCGGAGTGCCC
ATCCAGACGTCCATCGCACAGTCCAGCCTGTCGGAGGCCTACGAGCTGTG
CCAGAACTCGGGGCTCAACGAGCGGAACCCGCGGCTGCTGCCCATGGAGT
GTGGCGTGGAATACAAGGAGAGTCGTGGGTGCCCTCATCGGCAAGCTCGG
AGTGCCCATCCAGACGTCCATCGCACAGTCCAGCCTGTCGGAGGCCTACG
AGCTGTGCCAGAACTCGGGGCTCAACGAGCGGAACCCGCGGCTGCTGCCC
ATGGAGTGTGGCGTGGAATACAAGGGTACGGTGGAGAAGCAGCAGAGCGT
GTTCTTCATGATCCACGTGACGAAAGACATGGCGAGGGACGGCCTTGTGC
TGCGATGCACGTCCACGAACAAGAGCCGTTTCAAGCTTGTGGGTACGGTG
GAGAAGCAGCAGAGCGTGTTCTTCATGATCCACGTGACGAAAGACATGGC
GAGGGACGGCCTTGTGCTGCGATGCACGTCCACGAACAAGAGCCGTTTCA
AGCTTGTGCTTTTCGACAACGCCGGCAAGGCAAGGTATCAGGAGGAGAGC
AGCTCCACCTCCAACCACGAGGGCTTCACCATGTGCTCGCTCTTCTTTGC
GCCGTATGAGCTTTTCGACAACGCCGGCAAGGCAAGGTATCAGGAGGAGA
GCAGCTCCACCTCCAACCACGAGGGCTTCACCATGTGCTCGCTCTTCTTT
GCGCCGTATGAGGTGAGCAACGTTGCGGACACGATCAACATCGCGGGACT
CAAGGGGGAGGAGGTACCCCCTATCTTCCACCGATTGGATCTTTTCCAGG
TTACGAGGTGAGCAACGTTGCGGACACGATCAACATCGCGGGACTCAAGG
GGGAGGAGGTACCCCCTATCTTCCACCGATTGGATCTTTTCCAGGTTACG
AGCCGACAACTGGAGGAGGGCGACCACCTCGTGGGCGTCTACGGGGACAA
CTGGCTGAGGGCGGCGTCGTTCAGCCTGATGGCGATACCCCTCAGCCCCA
GGGCGAAGGAAGAGGAGGCCTCGGTGGTCAGCGTCGACGCGCAGCTCGTG
TCGCAGAGAGAACAGCTGAAGGCGTTCAAGCCGACAACTGGAGGAGGGCG
ACCACCTCGTGGGCGTCTACGGGGACAACTGGCTGAGGGCGGCGTCGTTC
AGCCTGATGGCGATACCCCTCAGCCCCAGGGCGAAGGAAGAGGAGGCCTC
GGTGGTCAGCGTCGACGCGCAGCTCGTGTCGCAGAGAGAACAGCTGAAGG
CGTTCAAGCCGGAGTATCTAGAGGCGAAGGCGAAGTGGGAGGCGACCCTC
GGGAAGCTGGAGGAGCTGACGGCCCACACGACGGAGCTCGTGAGGGCGAG
GGAGGTGGTCTACGACCAGCTCGTGGGGGCGTCTCTCTCGGCGTACGCAG
CCTCGGACCAGGCGGCGGCGTCAACCGCAAGCCGGAGTATCTAGAGGCGA
AGGCGAAGTGGGAGGCGACCCTCGGGAAGCTGGAGGAGCTGACGGCCCAC
ACGACGGAGCTCGTGAGGGCGAGGGAGGTGGTCTACGACCAGCTCGTGGG
GGCGTCTCTCTCGGCGTACGCAGCCTCGGACCAGGCGGCGGCGTCAACCG
CAAGGCGAGGGGTTCCGGCGAATGGGTCGGTTGGGTCCGCGGTAAACGTA
AACCACGCCTTGAAGAAGAGAAGAGGGGCGGCGGCGTCTTCGTCACAAGG
GGGCGGTGGAGGGGGAGGAGGCGGCGGAGGGTTGTTTGGGCGGCTCTTTT
GAGCGAGGGGTTCCGGCGAATGGGTCGGTTGGGTCCGCGGTAAACGTAAA
CCACGCCTTGAAGAAGAGAAGAGGGGCGGCGGCGTCTTCGTCACAAGGGG
GCGGTGGAGGGGGAGGAGGCGGCGGAGGGTTGTTTGGGCGGCTCTTTTGA
back to top