mRNA_E-siliculosus-1a_M_contig86.16681.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig86.16681.1 vs. uniprot
Match: A0A6H5KWL3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWL3_9PHAE) HSP 1 Score: 1515 bits (3922), Expect = 0.000e+0 Identity = 1457/1703 (85.55%), Postives = 1479/1703 (86.85%), Query Frame = 2
Query: 374 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----SSAEGTVIVQVEPAGSVDSAPSSVVGEPTTXXXXXXXXXXXXADPTTGARPGVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRPMLATDRSESSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPRPPALVASGSGSMSYSMGSSGHPTSTRSSTTSSPGSNLIGVSLISSTPSTDSILEPSPESSPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDVAESKDXXXXXXXXXXXXXXXXXXLPPVVVAVVNAPAYSPVREPSDSPPPAYSPLMGSLGSSPEDGAAADNTGAARGSSGSSRSDTSAPAPRRLVLGGGESMISDAMSEAGGASRHTAGAXXXXXXXTGLGSDGGDSSVDFSSSAPVELKTPSSVTGDAAAAGAGDRPVPSASLAVTPSSVGLQRLQQQQQQ---HKRTGSEGSIQSLILQGPSVWDLGGGGGGDADVEDVSMQDTYSPPSSPGAISTRTASTMASAVS 5461
AGA RGLEGEEVAVGFRGRLAA TVRRLQEEEGCTENTSVGDAEAGIAQYDDPDACLREGPLVGCNVLGISSCRLCVTNGGEAADYLPSCPEEVEEIIEE+FPQTRDTD PSTAPPATETPLLEGATPAPADV+ XXXXXX XXXXXXXX T+AP + +T XXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ATTAX XXXXXXXXXXXXXXXXX XXXXX XXXX XXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTVPTLAP XXXXXXXXXXXXXXXXXGETWAPNL+RELPXXXXXXXXXXXXXXXXSLLAPTVSP AFTGTPTAAPTE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDDEPDGSLIGSITIISDE PECAGAGNCEEVVEDGLESSLGRNGTVNVTDVTVTSTAAAADAGRRVLLFVADGDVAD+SSRNRLLRGSRQLQEEE AAGNQTETEIEYESSPDQSSNLTEAQQAAEQINALAETGIADLLDEMGLPPDTEVE+GVTKFVQLGTITDDAEDWD IFSAALADDRSISTAAYLGFALXXXXXXXXXXXXXXXXMLC+SKKDSRRRN+GVVRLEKIEESTAINDDG+DEFELPTKRMSEIKEQRRGSSFMNRIPFFG+SAKMKAGETDIEAGTTRRVAEDHIFAYPPHSSGGDSGKTQDAADASFPAPLGAPSGNDFFYATQRFADPQVNSPSPRTSTGALA G XXXXXXXX VA RRRPATAAAAPAHAGEVSE+WPLPISTTTVGA G GSMETKHDVESDAR SSLSPAGRAGSSGAI+SGDAA XXXXXX XXXXXXXXXXXXXXXXTEQKR+DVSLEDIEQE AEFGALQ+EHEA+NKEISARGRMALADFLLGTSDMTSPTSASGRIGGALPTVMEEGSPRGAQAAFSDAGTSSQVAEGSQV SSAEGTVIVQVEPA SVDSAPSSVVG XXXXXXXXXXX A TT AR G XXXXXXXXXXXXXXXXXX NRPMLATDRSESSG XXXXXXXXXXXXX IPRPPAL+ASGSGSMSYSMGSSGHPTSTRSSTTSSPGSNLIGVSLIS+TPS DSILEPSPESSPR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MD+AESKD LPPVVVAVVNAPAYSPVREPSDSPPPAYSPLMG+LGSSPEDGAAADNTG D SAP RRLVLGGGESMIS+AMSEAGGASRHTAGA XXX GLGSDGGDSSVDFSSSAPVELKTPSS TG AAAAG GDRPVPSASLAVTPSSVGLQRLQ HKRTGSEGSIQSLILQGPSVWDLGGGGGGDADVEDVSMQDTYSPPSSPGAISTRTASTMASAVS
Sbjct: 37 AGAVRGLEGEEVAVGFRGRLAALTVRRLQEEEGCTENTSVGDAEAGIAQYDDPDACLREGPLVGCNVLGISSCRLCVTNGGEAADYLPSCPEEVEEIIEEIFPQTRDTDVPSTAPPATETPLLEGATPAPADVVXXXXXXXXXXXXX------XXXXXXXXXTAAPGVVSTXXXXXXXXXXXXXXXXXXXXLSPDATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------------ATTAXGXXXXXXXXXXXXXXXXXAIVTTAXXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAXXTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTVPTLAPGXXXXXXXXXXXXXXXXXGETWAPNLIRELPXXXXXXXXXXXXXXXXSLLAPTVSPSAFTGTPTAAPTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDDEPDGSLIGSITIISDEAPECAGAGNCEEVVEDGLESSLGRNGTVNVTDVTVTSTAAAADAGRRVLLFVADGDVADDSSRNRLLRGSRQLQEEE-AAGNQTETEIEYESSPDQSSNLTEAQQAAEQINALAETGIADLLDEMGLPPDTEVEIGVTKFVQLGTITDDAEDWDSIFSAALADDRSISTAAYLGFALXXXXXXXXXXXXXXXXMLCLSKKDSRRRNAGVVRLEKIEESTAINDDGDDEFELPTKRMSEIKEQRRGSSFMNRIPFFGSSAKMKAGETDIEAGTTRRVAEDHIFAYPPHSSGGDSGKTQDAADASFPAPLGAPSGNDFFYATQRFADPQVNSPSPRTSTGALATGAAAXXXXXXXX---VADRRRPATAAAAPAHAGEVSEQWPLPISTTTVGAGGXXXXXXXXXXXXXXXXXGSMETKHDVESDARASSLSPAGRAGSSGAINSGDAAGATTXXXXXXGVTXXXXXXXXXXXXXXXXTEQKRDDVSLEDIEQEHAEFGALQREHEAENKEISARGRMALADFLLGTSDMTSPTSASGRIGGALPTVMEEGSPRGAQAAFSDAGTSSQVAEGSQVXXXXXXXXXSSAEGTVIVQVEPAASVDSAPSSVVGX-XXXXXXXXXXXXXIAGLTTEARLGXXXXXXXXXXXXXXXXXXXXXSSNARARQ--NRPMLATDRSESSGSEQSAPSXXXXXXXXXXXXXT-------IPRPPALLASGSGSMSYSMGSSGHPTSTRSSTTSSPGSNLIGVSLISNTPSADSILEPSPESSPRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAGDSSDMDIAESKDSPSSSAVSSPASVAAATGLPPVVVAVVNAPAYSPVREPSDSPPPAYSPLMGTLGSSPEDGAAADNTGXXXXXXXXXXXDASAPTARRLVLGGGESMISEAMSEAGGASRHTAGAAAVXXX-AGLGSDGGDSSVDFSSSAPVELKTPSSATGYAAAAGDGDRPVPSASLAVTPSSVGLQRLQXXXXXXXXHKRTGSEGSIQSLILQGPSVWDLGGGGGGDADVEDVSMQDTYSPPSSPGAISTRTASTMASAVS 1680
BLAST of mRNA_E-siliculosus-1a_M_contig86.16681.1 vs. uniprot
Match: D8LBV2_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBV2_ECTSI) HSP 1 Score: 1194 bits (3089), Expect = 0.000e+0 Identity = 1119/1214 (92.17%), Postives = 1128/1214 (92.92%), Query Frame = 2
Query: 377 GAARGLEGEEVAVGFRGRLAARTVRRLQEEEGCTENTSVGDAEAGIAQYDDPDACLREGPLVGCNVLGISSCRLCVTNGGEAADYLPSCPEEVEEIIEELFPQTRDTDAPSTAPPATETPLLEGATPAPADVIAXXXXXXVGGTSSPAAXXXXXXXXXXXATSAPAIATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAXXXXTLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTVPTLAPXXXXXXXXXXXXXXXXXXGETWAPNLVRELPXXXXXXXXXXXXXXXXSLLAPTVSPFAFTGTPTAAPTESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----VDDEPDGSLIGSITIISDEEPECAGAGNCEEVVEDGLESSLGRNGTVNVTDVTVTSTAAAADAGRRVLLFVADGDVADNSSRNRLLRGSRQLQEEEEAAGNQTETEIEYESSPDQSSNLTEAQQAAEQINALAETGIADLLDEMGLPPDTEVELGVTKFVQLGTITDDAEDWDGIFSAALADDRSISTAAYLGFALXXXXXXXXXXXXXXXXMLCISKKDSRRRNSGVVRLEKIEESTAINDDGNDEFELPTKRMSEIKEQRRGSSFMNRIPFFGTSAKMKAGETDIEAGTTRRVAEDHIFAYPPHSSGGDSGKTQDAADASFPAPLGAPSGNDFFYATQRFADPQVNSPSPRTSTGALAAGXXXXXXXXXXXXXKVAGRRRPATAAAAPAHAGEVSEEWPLPISTTTVGAAGAPGDSGLSSSTISAVSAGSMETKHDVESDARVSSLSPAGRAGSSGAISSGDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEQK-REDVSLEDIEQERAEFGALQQEHEAKNKEISARGRMALADFLLGTSDMTSPTSASGRIGGALPTVMEEGSPRGAQAAFSDAGTSSQVAEGSQVGSQVSSSAEGTVIVQVEPAGSVDSAPSSVVGE 4003
GA RGLEGEEVAVGFRGRLAARTVRRLQE+EGCTENTSVGDAEAGIAQYDDPDACLR+GPLVGCNVLGISSCRLCVTNGGEAADYLPSCPE VEEIIEELFPQTRDTDAPSTAPPATETPLLEGATPAPAD++A VGGTSSPAAXXXXXXXXXXXATSAPAIATT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXX XXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TTAXXXXXXXXXXXXXXXXXXXXXXXX XXXXXAXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTVPTLAPXXXXXXXXXXXXXXXXXXGETWAPNLVRELPXXXXXXXXXXXXXXXXSLLAPTVSPFAFTGTPTAAPTE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VDDEPDGSLIGSITIISDEEPEC GAGNCEEVVEDGLESSLGRNGTVNVTDVTVTSTAAAADAGRRVLLFVADGDVADNSSRNRLLRGSRQLQEEEEAAGNQTETEIEYESSPDQSSNLTEAQQAAEQINALAETGIADLLDEMGLPPDTEVELGVTKFVQLGTITDDAEDWDGIFSAALADDRSISTAAYLGFALXXXXXXXXXXXXXXXXMLCISKKDSRRR+SGVVRLEKIEESTAINDDGNDEFELPTKRMSEIKEQRRGSSFMN+IPFFGTS+KMKAGETDIEAGTTRRVAEDHIFAYPPHSSGGDSGKTQDAADASFPAPLGAPSGNDFFYATQRFADPQVNSPSPRTSTGALAAGXXXXXXXXXXXXXKVAGRRRPATAA APAHAGEVSEEWPLPISTTTVGAAGAPGDSGLSSSTISAVSAGSMETKHDVESDAR SSLSPAGRAGSSGAI+SGDAA XXXXXXXXXXXXXXXXXXXXXXXXX R+DV LEDIEQERAEFGALQQEHEAKNKEISARGRMALADFLLGTSDMTSPTSASGRIGGALPTVMEEGSPRGAQAAFSDAGTSSQVAEGSQVGSQVSSSAEGTVIVQVEPA SVDSAPSSVV E
Sbjct: 36 GAVRGLEGEEVAVGFRGRLAARTVRRLQEDEGCTENTSVGDAEAGIAQYDDPDACLRDGPLVGCNVLGISSCRLCVTNGGEAADYLPSCPEGVEEIIEELFPQTRDTDAPSTAPPATETPLLEGATPAPADLVATPIPSEVGGTSSPAAXXXXXXXXXXXATSAPAIATTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAXXXXXXXXATTAXXXXXXXXXXXXXXXXXXXAIVTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------TTAXXXXXXXXXXXXXXXXXXXXXXXXLXXXXXAXXXXX------------------------------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTVPTLAPXXXXXXXXXXXXXXXXXXGETWAPNLVRELPXXXXXXXXXXXXXXXXSLLAPTVSPFAFTGTPTAAPTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDDEPDGSLIGSITIISDEEPECEGAGNCEEVVEDGLESSLGRNGTVNVTDVTVTSTAAAADAGRRVLLFVADGDVADNSSRNRLLRGSRQLQEEEEAAGNQTETEIEYESSPDQSSNLTEAQQAAEQINALAETGIADLLDEMGLPPDTEVELGVTKFVQLGTITDDAEDWDGIFSAALADDRSISTAAYLGFALXXXXXXXXXXXXXXXXMLCISKKDSRRRDSGVVRLEKIEESTAINDDGNDEFELPTKRMSEIKEQRRGSSFMNKIPFFGTSSKMKAGETDIEAGTTRRVAEDHIFAYPPHSSGGDSGKTQDAADASFPAPLGAPSGNDFFYATQRFADPQVNSPSPRTSTGALAAGXXXXXXXXXXXXXKVAGRRRPATAAPAPAHAGEVSEEWPLPISTTTVGAAGAPGDSGLSSSTISAVSAGSMETKHDVESDARASSLSPAGRAGSSGAINSGDAAGATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDDVPLEDIEQERAEFGALQQEHEAKNKEISARGRMALADFLLGTSDMTSPTSASGRIGGALPTVMEEGSPRGAQAAFSDAGTSSQVAEGSQVGSQVSSSAEGTVIVQVEPAESVDSAPSSVVAE 1211 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig86.16681.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig86.16681.1 >prot_E-siliculosus-1a_M_contig86.16681.1 ID=prot_E-siliculosus-1a_M_contig86.16681.1|Name=mRNA_E-siliculosus-1a_M_contig86.16681.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1746bp MRHSSSGAARFLAALALLLPASPLAAAAPLGTTAAAAGAARGLEGEEVAVback to top mRNA from alignment at E-siliculosus-1a_M_contig86:541984..549987+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig86.16681.1 ID=mRNA_E-siliculosus-1a_M_contig86.16681.1|Name=mRNA_E-siliculosus-1a_M_contig86.16681.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=8004bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig86:541984..549987+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig86:541984..549987+ >mRNA_E-siliculosus-1a_M_contig86.16681.1 ID=mRNA_E-siliculosus-1a_M_contig86.16681.1|Name=mRNA_E-siliculosus-1a_M_contig86.16681.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=10476bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig86:541984..549987+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |