mRNA_E-siliculosus-1a_M_contig86.16668.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig86.16668.1 vs. uniprot
Match: A0A6H5KXL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXL5_9PHAE) HSP 1 Score: 771 bits (1992), Expect = 8.100e-281 Identity = 389/404 (96.29%), Postives = 396/404 (98.02%), Query Frame = 2
Query: 62 MTVAFRKASIFALLRLPCFAVWPNPRSKLLQHALRRRLATVATTCRATASSSSTSRPPIPATTATASTLLVGSKQDAAGRAMAEALLARGNWLETEPGVEPDGTRNGKAYRHKHSPTSLWLVEGRLLDLDDADRRWASASSVGSTDEQQSREQREPLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGGRPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSDEHWGRADAAEVWANVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGRGGGEGTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARERSALLEHLGTLGVEHRFKSSEC 1273
MTVAFRKASIFALLRLPCFAVWPNPRSKLLQHALRRRLAT ATTC ATASSS TS PPIPATTATASTLLVGSKQDAAGRAMAEALLARGNWLETEPGVE DGTRNG+AYRHK SPTSLWLVEGRLLDLDDADRRWASASSVGS DEQQS++QREPLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGG+PGRCPPPSPRLAGCLREL RAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSS+EHWGRADAAEVWA+VLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGRGGGEGTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARER+ALLEHLGTLGVEHRFKSSEC
Sbjct: 1 MTVAFRKASIFALLRLPCFAVWPNPRSKLLQHALRRRLATAATTCSATASSSPTSHPPIPATTATASTLLVGSKQDAAGRAMAEALLARGNWLETEPGVEHDGTRNGRAYRHKLSPTSLWLVEGRLLDLDDADRRWASASSVGSADEQQSQQQREPLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGGKPGRCPPPSPRLAGCLRELCRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWASVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGRGGGEGTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARERAALLEHLGTLGVEHRFKSSEC 404
BLAST of mRNA_E-siliculosus-1a_M_contig86.16668.1 vs. uniprot
Match: D8LBU1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBU1_ECTSI) HSP 1 Score: 647 bits (1670), Expect = 4.410e-233 Identity = 317/323 (98.14%), Postives = 321/323 (99.38%), Query Frame = 2
Query: 305 MAEALLARGNWLETEPGVEPDGTRNGKAYRHKHSPTSLWLVEGRLLDLDDADRRWASASSVGSTDEQQSREQREPLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGGRPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSDEHWGRADAAEVWANVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGRGGGEGTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARERSALLEHLGTLGVEHRFKSSEC 1273
MAEALLARGNWLETEPGVE DGTRNGKAYRHKHSPTSLWLVEGRLLDLDDADRRWASASSVGSTDE+ SREQREPLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGG+PGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSS+EHWGRADAAEVWANVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGRGGGEGTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARER+ALLEHLGTLGVEHRFKSSEC
Sbjct: 1 MAEALLARGNWLETEPGVERDGTRNGKAYRHKHSPTSLWLVEGRLLDLDDADRRWASASSVGSTDEKPSREQREPLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGGKPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSEEHWGRADAAEVWANVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGRGGGEGTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARERAALLEHLGTLGVEHRFKSSEC 323
BLAST of mRNA_E-siliculosus-1a_M_contig86.16668.1 vs. uniprot
Match: A0A836C895_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C895_9STRA) HSP 1 Score: 263 bits (672), Expect = 1.230e-80 Identity = 156/390 (40.00%), Postives = 202/390 (51.79%), Query Frame = 2
Query: 263 TLLVGSKQDAAGRAMAEALLARGNWLETEPGVEPDGTRNGKAYRHKHSPTSLWLV--EGRLLDLDDADRRWASASSVGSTDEQQSREQREPLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEAGGRPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSDEHWGRADAAEVWANVLTRMLGLDGSP-------------------------------------------------------AGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGRGGGEGTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARERSALLEHLGTLGVEHRFK 1261
TL+V + D A M +A+LAR W + G + R +H ++W+V E ++ D+ D + S+ V S +DV+FLS+H A SG P+L HPIG+PNP+ +GG PG+CPPP+PR+A CLREL A AGL S F+ T E THHGPWL+TPAMF EIGS++EHWGR DAAEVWANVL +L L +P A +W +L A RA F+ +GGGHYAPK GDLAR+ G + GHMLA+YA D+G GGG WR AV EAV TR+A PG + ALVDKKAF+A ++ + L L V +K
Sbjct: 10 TLIVTNTVDPASVVMKDAVLARQGWTPMQGGTQH---RELPMRAWEHRAGNIWMVCLEDSMIRADNIDEAFTSSHGVSSL---------------TDVIFLSRHAAASGKPSLTCHPIGLPNPTCEPVSGGVPGKCPPPNPRMASCLRELAVATEAAGLSSEFEVTFETTHHGPWLQTPAMFCEIGSTEEHWGRRDAAEVWANVLENLLRLGSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRLSDADRRHWCELTAAERAAAPVFISLGGGHYAPKAGDLARKPGVFAGHMLANYAFDWGEGGG---WRTAVAEAVAVTRSAMPGCR------LAALVDKKAFKAAQKREVESLLEELAVRVEYK 372
BLAST of mRNA_E-siliculosus-1a_M_contig86.16668.1 vs. uniprot
Match: A0A432HW31_9ARCH (D-tyrosyl-tRNA(Tyr) deacylase n=2 Tax=Archaea TaxID=2157 RepID=A0A432HW31_9ARCH) HSP 1 Score: 229 bits (583), Expect = 2.410e-68 Identity = 136/335 (40.60%), Postives = 181/335 (54.03%), Query Frame = 2
Query: 263 TLLVGSKQDAAGRAMAEALLARGNWLETEPGVEPDGTRNGKAYRHKHSPTSLWLVEGRLLDLDDADRRWASASSVGSTDEQQSREQREPLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPS---SSKEAGGRPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSDEHWGRADAAEVWANVLTRMLGLDGSPA-GDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGRGGGE-----------GTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARERSALL 1222
TLL+ S +D A +ALL RG W E +P E G+ +RH P +W R+L D D R+A+AS A +V+FLS+H A SG P+L +H IGVP S S E GG G PP+PR A R + +AA + + FD T+E THHGP L +P MF+EIGSS+ HWGR DAAE WA+V++ LGLDG P GD W L + RA+ + IGGGHYAP+ D+ RR+ + GH +ASYAL+ R E G W A+ STR +FPG G V A +D+K+F+ +R A++
Sbjct: 5 TLLIVSAEDIASTVQGDALLGRGGWNEADPVEE------GRTWRHTSQPVHIWWFPERVLWADQLDERYAAASG----------------AQVREVIFLSRHSAASGRPSLTLHVIGVPGESPVGESAEYGGIKGAVVPPNPRFAAWYRRMVQAAHDHAVTDEFDLTIETTHHGPSLSSPTMFIEIGSSESHWGRTDAAEAWADVISEGLGLDGGPGLGD--WHALSDSERAQSKVMLGIGGGHYAPRHIDVLRRTNCWAGHQIASYALEMQRPEDESWDPQTGDLPEGQWEHAIRVCAESTRQSFPG------GEVMAHLDRKSFKGWQRRAVI 309
BLAST of mRNA_E-siliculosus-1a_M_contig86.16668.1 vs. uniprot
Match: A0A4D9D3I1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3I1_9STRA) HSP 1 Score: 218 bits (556), Expect = 7.130e-64 Identity = 144/378 (38.10%), Postives = 195/378 (51.59%), Query Frame = 2
Query: 215 SSTSRPPIPATTA----TASTLLVGSKQDAAGRAMAEALLARGNWLETEP-------GVEPDGTRNGKAYRHKHSPTSLWLVEGRLLDLDDADRRWASASSVGSTDEQQSREQREPLALPSDVVFLSKHVAKSGVPALCVHPIG------VPNPSSSKEAGGRPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSDEHWGRADAAEVWANVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLAR-RSGSYVGHMLASYALDFGRGGGEGTWREAVTEAVRSTRAAF--PGA------GGGVAGGVGALVDKKAFRARERSALLEHLGTLGVEHRFKSSE 1270
S+T+R PA TA + + LL+ + +D A M +ALLARG W E P PDG +N +W + L D D+ W +A P +++FLS+H A SG P+L +HPIG P + E GG PGRC PPSPR+A R+L A ++AGL +F+ TLE THHGPW P MFVEIGS +E WGR DAA VWA+VL + LGL + ++ PAA + V GGGHY PK DL R R VGH+LASY G E W+ + EA+++TR A+ P GG V +DKKAF++ R AL+++L + G++ FK ++
Sbjct: 16 STTNRSAFPAATALHRASGTILLLATTEDKASVNMLQALLARGGWEEITPVDASSRVWHRPDGPQN----------VFMWQITQGFLRADWLDKAWLTA---------------HPSQRIQEMIFLSRHAAASGRPSLTIHPIGNPGQPFAPQEEARGEHGGIPGRCVPPSPRMAPLFRQLHGAVQDAGLAGTFEVTLEATHHGPWHMHPTMFVEIGSKEEDWGREDAAHVWADVLDKNLGLSATEENGVSI----PAAEEPKLVIVGAGGGHYTPKMNDLLRHREDVLVGHILASYCFT----GSEEDWKRGIDEAIQATRRAYSLPSENEEEEDGGKEETRVCVYIDKKAFKSAPRQALVQYLESRGIQCAFKEND 360
BLAST of mRNA_E-siliculosus-1a_M_contig86.16668.1 vs. uniprot
Match: A0A2E6HJE8_9EURY (D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E6HJE8_9EURY) HSP 1 Score: 213 bits (543), Expect = 2.520e-62 Identity = 129/340 (37.94%), Postives = 181/340 (53.24%), Query Frame = 2
Query: 266 LLVGSKQDAAGRAMAEALLARGNWLETEPGVEPDGTRNGKAYRHKHSPTSLWLVEGRLLDLDDADRRWASASSVGSTDEQQSREQREPLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEA--GGRPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSDEHWGRADAAEVWANVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGRGGGE-----------GTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARERSALLEHLGTLGV 1246
L++ S D A EALL G+W + G+E +G H S +W ++ LL D D RW SA+ E + +V+F S+H A SG P+L VHP+G+P+ E GG+P CPPP+PRLA RE+ + + L F TLEVTHHGPWLETP++F+EIGS+ EHW R DAA++ A ++ + LGLDG G W +P A V IGGGHYAP G LA G ++GHM+ ++L + E G WR+A+ A+ STR AFP G + A +D+K+F+ +R ++ HL +G+
Sbjct: 17 LIIVSIPDIASLIQGEALLDLGDWQD---GMEVEGCST-----HSFSDARIWWLDSGLLWEDHLDSRWTSATG-------------EKVC---EVIFPSRHSAASGQPSLTVHPVGIPHIGEEDEIPFGGKPASCPPPNPRLASWYREIRKCGSSSELSDEFSFTLEVTHHGPWLETPSLFIEIGSTPEHWPRRDAAKILAEIIWQGLGLDGGD-GIGTWDQHNPCKVA-----VGIGGGHYAPFIGRLAAHEGIWLGHMVGGHSLPMDKPDDESWDPLTGELPAGNWRQAINSAIESTRLAFP------KGEIWAYMDRKSFKGWQRQSIKRHLQDIGI 320
BLAST of mRNA_E-siliculosus-1a_M_contig86.16668.1 vs. uniprot
Match: A0A842PJE0_9EURY (D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A842PJE0_9EURY) HSP 1 Score: 211 bits (538), Expect = 1.140e-61 Identity = 128/334 (38.32%), Postives = 176/334 (52.69%), Query Frame = 2
Query: 263 TLLVGSKQDAAGRAMAEALLARGNWLETEPGVEPDGTRNGKAYRHKHSPTSLWLVEGRLLDLDDADRRWASASSVGSTDEQQSREQREPLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPS---SSKEAGGRPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSDEHWGRADAAEVWANVLTRMLGLDGSPA-GDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGRGGGE-----------GTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARERSAL 1219
TLL+ S+ D A +ALLARG W E NG+++ H P LW R+L D+ + R++ S +V+FLS+H A SG+P+L +H IGVP S + E GG G P+PR A R + +A E GL FD T+E THHGP L P MF+EIGSS+ HW R DAAE WA+V++ LGLDGS GD W +L + + + IGGGHYAP+ D+ R++ + GH LA YAL+ R E G W+ ++ A+ ST+ AFPG G V A +D+K+F+ +R A+
Sbjct: 3 TLLIVSEPDIASTIQGDALLARGGWTEVTT------VENGRSWAHDRKPVHLWWFPDRVLMEDNLENRYSDGSGANV----------------KEVIFLSRHFAASGLPSLTLHVIGVPGESPVGETAEFGGIKGEVVLPNPRFAEWYRRMHQAGIEHGLIPEFDMTIETTHHGPSLSVPTMFIEIGSSETHWDRRDAAEAWADVISEGLGLDGSNGLGD--WENLSSEQKGDAKVMLGIGGGHYAPRHTDVIRKTNCWAGHQLALYALEMTRPEDEDWDPITGVLPTGQWQHSIEVALESTKQAFPG------GQVIAHLDRKSFKGWQRQAV 306
BLAST of mRNA_E-siliculosus-1a_M_contig86.16668.1 vs. uniprot
Match: A0A7J4GFD1_9ARCH (D-tyrosyl-tRNA(Tyr) deacylase n=4 Tax=root TaxID=1 RepID=A0A7J4GFD1_9ARCH) HSP 1 Score: 210 bits (535), Expect = 2.180e-61 Identity = 134/340 (39.41%), Postives = 181/340 (53.24%), Query Frame = 2
Query: 263 TLLVGSKQDAAGRAMAEALLARGNWLETEPGVEPDGTRNGKAYRHKHS--PTSLWLVEGRLLDLDDADRRWASASSVGSTDEQQSREQREPLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKE---AGGRPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSDEHWGRADAAEVWANVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGR----GGGEGTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARERSALLEHLGTLGVEHR 1255
TLL+ S+ D A + A+LA G W E G G + H HS P L L++G ++ D+ D +SA + +V+ LS+H AKSG+PAL VH IGVP E AGGR G PPSPR EL R+A +GL FD TLE THHGP+L P +++EIGS++E W R DA+++WA V++ +LGLDGS I W E + +GGGHYAP+ + + G ++ H+LA+YAL+F G G WR +V E VR TR AFPG G V A +D+K+F+ +R AL+ L L V R
Sbjct: 3 TLLLSSRADDASMNLYGAVLALGGWSE--------GEEFGHGFVHFHSSQPVHLLLIDGLHINADEIDSAHSSAVDIDV----------------EEVLVLSRHAAKSGIPALTVHAIGVPGEVPHGEVGYAGGRKGSAVPPSPRFTAIFLELQRSASLSGLAEEFDITLETTHHGPFLTKPTLYIEIGSTEEEWSRRDASKLWAEVISTVLGLDGSTGQGI-WP-------GEGEVMIGLGGGHYAPRHTAVVNQGGFWMAHLLANYALEFDGPVEDGLPTGPWRHSVGEVVRKTREAFPG------GVVFAHLDRKSFKGWQRRALISELDELAVPVR 304
BLAST of mRNA_E-siliculosus-1a_M_contig86.16668.1 vs. uniprot
Match: W7TND3_9STRA (Elongator complex protein 2 n=6 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TND3_9STRA) HSP 1 Score: 225 bits (573), Expect = 3.120e-61 Identity = 157/420 (37.38%), Postives = 214/420 (50.95%), Query Frame = 2
Query: 104 RLPCFAVWPNPRSKLLQH----ALRRRLA-TVATTCRATASSSSTSRPPIPATTA----TASTLLVGSKQDAAGRAMAEALLARGNWLETEP-------GVEPDGTRNGKAYRHKHSPTSLWLVEGRLLDLDDADRRWASASSVGSTDEQQSREQREPLALPSDVVFLSKHVAKSGVPALCVHPIGVPN-PSSSKEA-----GGRPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSDEHWGRADAAEVWANVLTRMLGLDGSPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLAR-RSGSYVGHMLASYALDFGRGGGEGTWREAVTEAVRSTRAAF--PGA------GGGVAGGVGALVDKKAFRARERSALLEHLGTLGVEHRFKSSE 1270
R+P F + +L+ LR R+ +V T A S+T+RP PA TA + + LL+ + +D A M +ALLARG W ET P PDG +N +W + L D D+ W +A P +++FLS+H A SG P+L +HPIG P P + +E GG PGRC PPSPR+A R+L RA ++AGL +F+ TLE THHGPW P MFVEIGS +E WGR DAA VWA+VL + LGL + A + PA + V GGGHY PK DL R R +GH+LASY G E W+ + EA+ +TR A+ P GG V +DKKAF++ R AL+++L + G++ FK ++
Sbjct: 1043 RIPSFCLREASHQGILRRRCTPVLRTRMRLSVTTPSMAAQPHSTTTRPAFPAATALHRASGTILLLATTEDKASVNMLQALLARGGWEETTPVDASSRVWHRPDGPQN----------VFMWQITQGFLRADWLDKAWLTA---------------HPSQRIQEMIFLSRHAAASGRPSLTIHPIGNPGQPFAPQEGARGAHGGIPGRCVPPSPRMAPLFRQLHRAVQDAGLAGTFEVTLEATHHGPWHMHPTMFVEIGSKEEDWGREDAAHVWADVLDKNLGLSATEANGVRI----PAVEESKLVIVGAGGGHYTPKMNDLLRHREDVLLGHILASYCFT----GSEEDWKRGIDEAIEATRRAYSLPSENAEEEDGGKEETRVCVYIDKKAFKSAPRQALVQYLESRGIQCAFKEND 1429
BLAST of mRNA_E-siliculosus-1a_M_contig86.16668.1 vs. uniprot
Match: A0A2E6IAL8_9EURY (D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E6IAL8_9EURY) HSP 1 Score: 208 bits (530), Expect = 2.770e-60 Identity = 134/343 (39.07%), Postives = 179/343 (52.19%), Query Frame = 2
Query: 263 TLLVGSKQDAAGRAMAEALLARGNWLETEPGVEPDGTRNGKAYRHKHSPTSLWLVEGRLLDLDDADRRWASASSVGSTDEQQSREQREPLALPSDVVFLSKHVAKSGVPALCVHPIGVPNPSSSKEA---GGRPGRCPPPSPRLAGCLRELGRAAREAGLDSSFDTTLEVTHHGPWLETPAMFVEIGSSDEHWGRADAAEVWANVLTRMLGLDG-SPAGDINWRDLDPAARAERSAFVCIGGGHYAPKPGDLARRSGSYVGHMLASYALDFGRGGG-----------EGTWREAVTEAVRSTRAAFPGAGGGVAGGVGALVDKKAFRARERSALLEHLGTLGV 1246
TLL+ S+ D A +ALLARG W EP NGK + H ++ LW R+L D D R++ A+ + ++V+FLS+H A SG P+L +H IGVP + E GG G+ PS R AG R + AA + L F+ T+E THHGP L TP MF+EIGSS+ HW R DAAE WA+V+ + LGLDG S GD W L R + V IGGGHYAP+ D+ R++ + GH LASYAL+ + EG W+ ++ V STRAAFP G V A +D+K+F+ +R + L L V
Sbjct: 19 TLLIVSEPDIASTIQGDALLARGGWSSCEP------VENGKVWVHDNAEVYLWWFGHRVLMEDHLDTRFSRAAGQ----------------VVNEVIFLSRHYAASGRPSLTLHVIGVPGETPKGEIAEFGGIKGQVVLPSTRFAGWYRLMCDAAHQHQLVPEFELTIETTHHGPCLTTPTMFIEIGSSESHWNRIDAAEAWADVIEKGLGLDGGSGVGD--WNSLSLEERKKAKVMVGIGGGHYAPRHTDVLRKTNCWAGHQLASYALEMCKPEDNEWEPDEGELPEGAWKHSIRVCVESTRAAFPD------GMVMAHLDRKSFKGWQRRVIKRWLKELNV 331 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig86.16668.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig86.16668.1 >prot_E-siliculosus-1a_M_contig86.16668.1 ID=prot_E-siliculosus-1a_M_contig86.16668.1|Name=mRNA_E-siliculosus-1a_M_contig86.16668.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=405bp MTVAFRKASIFALLRLPCFAVWPNPRSKLLQHALRRRLATVATTCRATASback to top mRNA from alignment at E-siliculosus-1a_M_contig86:436414..440131- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig86.16668.1 ID=mRNA_E-siliculosus-1a_M_contig86.16668.1|Name=mRNA_E-siliculosus-1a_M_contig86.16668.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=3718bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig86:436414..440131- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig86:436414..440131- >mRNA_E-siliculosus-1a_M_contig86.16668.1 ID=mRNA_E-siliculosus-1a_M_contig86.16668.1|Name=mRNA_E-siliculosus-1a_M_contig86.16668.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2430bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig86:436414..440131- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |