mRNA_E-siliculosus-1a_M_contig84.16569.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig84.16569.1 vs. uniprot
Match: A0A7K4FHF9_9ARCH (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A7K4FHF9_9ARCH) HSP 1 Score: 60.5 bits (145), Expect = 3.610e-6 Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 3
Query: 1290 RSGSSGVSCRTG----LVPGGGWDFVDVDPFGSCLPFLEAAVGAVADGGVLAVAATDLAVLCG 1466
R G+ GV R G L P +D+VD+DP+GS LPFL A+GA+A GG+LAV ATD+ VL G
Sbjct: 107 RFGARGVLARAGDARELPPEAPFDYVDLDPYGSPLPFLATALGALAPGGILAVTATDMMVLAG 169
BLAST of mRNA_E-siliculosus-1a_M_contig84.16569.1 vs. uniprot
Match: A0A835Z9D7_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9D7_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 3.970e-6 Identity = 29/42 (69.05%), Postives = 36/42 (85.71%), Query Frame = 3
Query: 1344 WDFVDVDPFGSCLPFLEAAVGAVADGGVLAVAATDLAVLCGK 1469
+DFVDVDPFGS +PF AA+ AV DGGV+A+AATD+ VLCG+
Sbjct: 226 FDFVDVDPFGSPMPFAAAALAAVTDGGVVALAATDMQVLCGR 267
BLAST of mRNA_E-siliculosus-1a_M_contig84.16569.1 vs. uniprot
Match: T1CTA9_9ZZZZ (N(2),N(2)-dimethylguanosine tRNA methyltransferase (Fragment) n=1 Tax=mine drainage metagenome TaxID=410659 RepID=T1CTA9_9ZZZZ) HSP 1 Score: 59.7 bits (143), Expect = 4.040e-6 Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 3
Query: 1344 WDFVDVDPFGSCLPFLEAAVGAVADGGVLAVAATDLAVLCGKNKG 1478
+++VD+DP+GS LPFLE AV A ADGGVLAV ATDL VL G G
Sbjct: 86 FEYVDLDPYGSPLPFLETAVAATADGGVLAVTATDLMVLAGVQPG 130
BLAST of mRNA_E-siliculosus-1a_M_contig84.16569.1 vs. uniprot
Match: A0A098VNT6_9MICR (N2,N2-dimethylguanosine tRNA methyltransferase n=1 Tax=Mitosporidium daphniae TaxID=1485682 RepID=A0A098VNT6_9MICR) HSP 1 Score: 59.7 bits (143), Expect = 6.270e-6 Identity = 27/45 (60.00%), Postives = 37/45 (82.22%), Query Frame = 3
Query: 1344 WDFVDVDPFGSCLPFLEAAVGAVADGGVLAVAATDLAVLCGKNKG 1478
+D +DVDP+GS PFL+AAV AV+ GG+LA+ +TD+AVLCG + G
Sbjct: 149 FDLIDVDPYGSASPFLDAAVQAVSSGGLLAITSTDMAVLCGVHPG 193
BLAST of mRNA_E-siliculosus-1a_M_contig84.16569.1 vs. uniprot
Match: A0A842MCS8_9ARCH (tRNA (Guanine(10)-N(2))-dimethyltransferase (Fragment) n=1 Tax=Candidatus Methanosuratincola sp. TaxID=2495426 RepID=A0A842MCS8_9ARCH) HSP 1 Score: 58.9 bits (141), Expect = 7.230e-6 Identity = 26/47 (55.32%), Postives = 39/47 (82.98%), Query Frame = 3
Query: 1332 PGGGWDFVDVDPFGSCLPFLEAAVGAVADGGVLAVAATDLAVLCGKN 1472
PGG +DF+D+DPFG+ +PF++++V A+ +GG+LAV ATD A LCG +
Sbjct: 131 PGGRFDFIDIDPFGTPIPFIDSSVRALRNGGMLAVTATDTAPLCGVH 177
BLAST of mRNA_E-siliculosus-1a_M_contig84.16569.1 vs. uniprot
Match: R7Q5C0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5C0_CHOCR) HSP 1 Score: 60.1 bits (144), Expect = 8.700e-6 Identity = 29/43 (67.44%), Postives = 35/43 (81.40%), Query Frame = 3
Query: 1344 WDFVDVDPFGSCLPFLEAAVGAVADGGVLAVAATDLAVLCGKN 1472
+D VD+DP+GS PFL+ AV AVADGG+LAV TDLAVLCG +
Sbjct: 399 FDAVDLDPYGSAAPFLDVAVQAVADGGLLAVTCTDLAVLCGNS 441
BLAST of mRNA_E-siliculosus-1a_M_contig84.16569.1 vs. uniprot
Match: A0A7S3DYY6_9CHLO (Hypothetical protein (Fragment) n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7S3DYY6_9CHLO) HSP 1 Score: 58.2 bits (139), Expect = 1.290e-5 Identity = 29/56 (51.79%), Postives = 39/56 (69.64%), Query Frame = 3
Query: 1308 VSCRTGLVP-GGGWDFVDVDPFGSCLPFLEAAVGAVADGGVLAVAATDLAVLCGKN 1472
CR ++ +D VD+DP+GS PFL++AV AV+D G+L V ATD+AVLCG N
Sbjct: 226 ADCRLAMLAHNAAFDVVDLDPYGSPAPFLDSAVQAVSDNGLLCVTATDMAVLCGNN 281
BLAST of mRNA_E-siliculosus-1a_M_contig84.16569.1 vs. uniprot
Match: A0A533W7B3_9ARCH (Methyltransferase (Fragment) n=1 Tax=Thaumarchaeota archaeon TaxID=2026795 RepID=A0A533W7B3_9ARCH) HSP 1 Score: 56.2 bits (134), Expect = 1.310e-5 Identity = 24/41 (58.54%), Postives = 35/41 (85.37%), Query Frame = 3
Query: 1344 WDFVDVDPFGSCLPFLEAAVGAVADGGVLAVAATDLAVLCG 1466
+DFVD+DPFG+ +P+++ A GA ADGGV+++ +TD AVLCG
Sbjct: 126 FDFVDIDPFGTPVPYIQGAFGAAADGGVVSLTSTDTAVLCG 166
BLAST of mRNA_E-siliculosus-1a_M_contig84.16569.1 vs. uniprot
Match: A0A2X0P9J5_9BASI (BQ5605_C009g05805 protein n=3 Tax=Microbotryum TaxID=34416 RepID=A0A2X0P9J5_9BASI) HSP 1 Score: 59.3 bits (142), Expect = 1.460e-5 Identity = 27/43 (62.79%), Postives = 35/43 (81.40%), Query Frame = 3
Query: 1344 WDFVDVDPFGSCLPFLEAAVGAVADGGVLAVAATDLAVLCGKN 1472
+D VD+DP+GS +PFL+AAVGAVADGG+L + TD+ VL G N
Sbjct: 367 FDCVDLDPYGSAVPFLDAAVGAVADGGLLCITCTDMGVLAGHN 409
BLAST of mRNA_E-siliculosus-1a_M_contig84.16569.1 vs. uniprot
Match: A0A238FL88_9BASI (BQ2448_7569 protein n=1 Tax=Microbotryum intermedium TaxID=269621 RepID=A0A238FL88_9BASI) HSP 1 Score: 59.3 bits (142), Expect = 1.520e-5 Identity = 27/43 (62.79%), Postives = 35/43 (81.40%), Query Frame = 3
Query: 1344 WDFVDVDPFGSCLPFLEAAVGAVADGGVLAVAATDLAVLCGKN 1472
+D VD+DP+GS +PFL+AAVGAVADGG+L + TD+ VL G N
Sbjct: 398 FDCVDLDPYGSAVPFLDAAVGAVADGGLLCITCTDMGVLAGHN 440 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig84.16569.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig84.16569.1 >prot_E-siliculosus-1a_M_contig84.16569.1 ID=prot_E-siliculosus-1a_M_contig84.16569.1|Name=mRNA_E-siliculosus-1a_M_contig84.16569.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=436bp MANGKEEKVIAEGRALLSVTPGVFYSDHQVLQRDLSVAVLRAYRQFALEGback to top mRNA from alignment at E-siliculosus-1a_M_contig84:695644..699457- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig84.16569.1 ID=mRNA_E-siliculosus-1a_M_contig84.16569.1|Name=mRNA_E-siliculosus-1a_M_contig84.16569.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=3814bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig84:695644..699457- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig84:695644..699457- >mRNA_E-siliculosus-1a_M_contig84.16569.1 ID=mRNA_E-siliculosus-1a_M_contig84.16569.1|Name=mRNA_E-siliculosus-1a_M_contig84.16569.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2616bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig84:695644..699457- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |