mRNA_E-siliculosus-1a_M_contig84.16557.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig84.16557.1
Unique NamemRNA_E-siliculosus-1a_M_contig84.16557.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig84.16557.1 vs. uniprot
Match: D8LQ22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ22_ECTSI)

HSP 1 Score: 971 bits (2509), Expect = 0.000e+0
Identity = 582/671 (86.74%), Postives = 587/671 (87.48%), Query Frame = 1 
Query:    1 MAVLMAKCERLRQAYSDYKHLSTDNLSFVAGLRGRPVPAPGADLGRRKVRRRPKPDDVPKGEDDEKVEEDDDSSLESQGAKQACPSRACAPRADKLEAMMEKRVAAQTARQKAQSRLGSARERSQEAETKLEEAKAELVRMTKAIAEGDERTEALQDTLRNEGSINKAVAEELDMLLVEAMNLRREFVVDTLPPRPTTVIVPVNEGEEDNGAPSYQEDGRSLESPVIAPGQQLLARDGXXXXXXXXXXXX-PHDGSREWIHSGRLAHTGIFVRPPRPKSRGGGSVNRNPPCSPQESSSDQQRNSGDCSSGSSRSGLPXXXXXXXXXXXX-----DAATGRDGGEGAGVEAEAATGDYGGGSKGRSEGEDAWSCCGKPVLSAGRGCQPREPLATPEDLLLDTIDPRSRLGQPLDFRDFLPRIAWLGLSPDPVRPLPGSPGDGTLRPHTAPERLTDAAGQWSPQGWAGGDANREYDRRASRSRNGGLVGGVWASGGRRXXESGGGLGVAHPPSPDSGVNAWWKNKTPHQWGGXXXXXXXXADGRG---SRTWAGEAPLLPKRHAFLRRSHPTATTATYASSRSGTTHNNGEAXXXXXXXXXXXXXXXXXXXXXXAAGVDEFWPRTQILGMNGGRLPRRVRQAPIDRPLTAPCGKVGRRRVRTRGGNKGAANRP 1986
            MAVLMAKCERLRQAYSDYKHLSTDNLSFVAGLRGRPVPAPGADLGR KVRRRPKPDDVPK ED        DSSLESQGAKQACPSR+CAPR DKLEAM EKRVAAQTARQKAQSRLGSARERSQEAETKLEEAKAELVRMTKAIAEGDERTEALQDTLRNEGSINKAVAEELDMLLVEAMNLRREFVVDTLPPRPTTVIVPV+EGEEDN APSYQEDGRSLESPVIAPGQQLLARDG    XXXXXXXX PHDGSREWIHSGRLAHTGIFVRPPRPKSRG                                    XXXXXXXXXXXX     DAATGRDGGEG GVEAEAA GDYGGGSKGRSEGEDAWSCCGKPVLSAGRGC+PREPLATPEDLLLDTIDPRSRLGQPLDFRDFLP+IAWLGLSPDPVRPLPGSPGDGTLRPHTAPERLTDAAGQWSPQGWAGGDANREYDRRASRSRNGGLVGGVWASGGRR    GGGLGVAHPPS DSGVN WWKNKTPHQ GG XXXXXXX        SRT AGEAPLLPKRHAFLRRSHPTATTATYASSRSGTT NNG+A  XXXXXXXXXXXXXXXXXXXXAAGVDEFWPRTQILGMNGGRLP RVRQ PIDRPLTAPCGKVGRRRVRTRGGNKG ANRP
Sbjct:    1 MAVLMAKCERLRQAYSDYKHLSTDNLSFVAGLRGRPVPAPGADLGRCKVRRRPKPDDVPKSEDXXXXXXXXDSSLESQGAKQACPSRSCAPRVDKLEAMTEKRVAAQTARQKAQSRLGSARERSQEAETKLEEAKAELVRMTKAIAEGDERTEALQDTLRNEGSINKAVAEELDMLLVEAMNLRREFVVDTLPPRPTTVIVPVDEGEEDNDAPSYQEDGRSLESPVIAPGQQLLARDGGGKGXXXXXXXXXPHDGSREWIHSGRLAHTGIFVRPPRPKSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAATGRDGGEGVGVEAEAAAGDYGGGSKGRSEGEDAWSCCGKPVLSAGRGCEPREPLATPEDLLLDTIDPRSRLGQPLDFRDFLPQIAWLGLSPDPVRPLPGSPGDGTLRPHTAPERLTDAAGQWSPQGWAGGDANREYDRRASRSRNGGLVGGVWASGGRRRRGPGGGLGVAHPPSLDSGVNTWWKNKTPHQRGGRXXXXXXXXXXXXXXXSRTEAGEAPLLPKRHAFLRRSHPTATTATYASSRSGTTRNNGDARTXXXXXXXXXXXXXXXXXXXXAAGVDEFWPRTQILGMNGGRLPTRVRQVPIDRPLTAPCGKVGRRRVRTRGGNKGGANRP 671
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig84.16557.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ22_ECTSI0.000e+086.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig84contigE-siliculosus-1a_M_contig84:561177..567038 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1989
Model size1989
Exons9
Hectar predicted targeting categoryother localisation
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936291.88845-CDS-E-siliculosus-1a_M_contig84:561176..5612331622936291.88845-CDS-E-siliculosus-1a_M_contig84:561176..561233Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig84 561177..561233 +
1696251011.396254-CDS-E-siliculosus-1a_M_contig84:561176..5612331696251011.396254-CDS-E-siliculosus-1a_M_contig84:561176..561233Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig84 561177..561233 +
1622936291.9108248-CDS-E-siliculosus-1a_M_contig84:561775..5619131622936291.9108248-CDS-E-siliculosus-1a_M_contig84:561775..561913Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig84 561776..561913 +
1696251011.4050617-CDS-E-siliculosus-1a_M_contig84:561775..5619131696251011.4050617-CDS-E-siliculosus-1a_M_contig84:561775..561913Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig84 561776..561913 +
1622936291.931271-CDS-E-siliculosus-1a_M_contig84:562471..5626271622936291.931271-CDS-E-siliculosus-1a_M_contig84:562471..562627Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig84 562472..562627 +
1696251011.4138424-CDS-E-siliculosus-1a_M_contig84:562471..5626271696251011.4138424-CDS-E-siliculosus-1a_M_contig84:562471..562627Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig84 562472..562627 +
1622936291.9948692-CDS-E-siliculosus-1a_M_contig84:562980..5630701622936291.9948692-CDS-E-siliculosus-1a_M_contig84:562980..563070Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig84 562981..563070 +
1696251011.4219983-CDS-E-siliculosus-1a_M_contig84:562980..5630701696251011.4219983-CDS-E-siliculosus-1a_M_contig84:562980..563070Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig84 562981..563070 +
1622936292.0187604-CDS-E-siliculosus-1a_M_contig84:563539..5636321622936292.0187604-CDS-E-siliculosus-1a_M_contig84:563539..563632Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig84 563540..563632 +
1696251011.4297557-CDS-E-siliculosus-1a_M_contig84:563539..5636321696251011.4297557-CDS-E-siliculosus-1a_M_contig84:563539..563632Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig84 563540..563632 +
1622936292.045223-CDS-E-siliculosus-1a_M_contig84:564068..5641901622936292.045223-CDS-E-siliculosus-1a_M_contig84:564068..564190Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig84 564069..564190 +
1696251011.4402459-CDS-E-siliculosus-1a_M_contig84:564068..5641901696251011.4402459-CDS-E-siliculosus-1a_M_contig84:564068..564190Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig84 564069..564190 +
1622936292.06013-CDS-E-siliculosus-1a_M_contig84:564467..5649721622936292.06013-CDS-E-siliculosus-1a_M_contig84:564467..564972Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig84 564468..564972 +
1696251011.4484994-CDS-E-siliculosus-1a_M_contig84:564467..5649721696251011.4484994-CDS-E-siliculosus-1a_M_contig84:564467..564972Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig84 564468..564972 +
1622936292.0793824-CDS-E-siliculosus-1a_M_contig84:565718..5658301622936292.0793824-CDS-E-siliculosus-1a_M_contig84:565718..565830Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig84 565719..565830 +
1696251011.4565487-CDS-E-siliculosus-1a_M_contig84:565718..5658301696251011.4565487-CDS-E-siliculosus-1a_M_contig84:565718..565830Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig84 565719..565830 +
1622936292.0982409-CDS-E-siliculosus-1a_M_contig84:566322..5670381622936292.0982409-CDS-E-siliculosus-1a_M_contig84:566322..567038Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig84 566323..567038 +
1696251011.464574-CDS-E-siliculosus-1a_M_contig84:566322..5670381696251011.464574-CDS-E-siliculosus-1a_M_contig84:566322..567038Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig84 566323..567038 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig84.16557.1prot_E-siliculosus-1a_M_contig84.16557.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig84 561177..567038 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig84.16557.1

>prot_E-siliculosus-1a_M_contig84.16557.1 ID=prot_E-siliculosus-1a_M_contig84.16557.1|Name=mRNA_E-siliculosus-1a_M_contig84.16557.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=663bp
MAVLMAKCERLRQAYSDYKHLSTDNLSFVAGLRGRPVPAPGADLGRRKVR
RRPKPDDVPKGEDDEKVEEDDDSSLESQGAKQACPSRACAPRADKLEAMM
EKRVAAQTARQKAQSRLGSARERSQEAETKLEEAKAELVRMTKAIAEGDE
RTEALQDTLRNEGSINKAVAEELDMLLVEAMNLRREFVVDTLPPRPTTVI
VPVNEGEEDNGAPSYQEDGRSLESPVIAPGQQLLARDGGGKSGGGGGGGG
PHDGSREWIHSGRLAHTGIFVRPPRPKSRGGGSVNRNPPCSPQESSSDQQ
RNSGDCSSGSSRSGLPGAAAAAAAAAAADAATGRDGGEGAGVEAEAATGD
YGGGSKGRSEGEDAWSCCGKPVLSAGRGCQPREPLATPEDLLLDTIDPRS
RLGQPLDFRDFLPRIAWLGLSPDPVRPLPGSPGDGTLRPHTAPERLTDAA
GQWSPQGWAGGDANREYDRRASRSRNGGLVGGVWASGGRRRRESGGGLGV
AHPPSPDSGVNAWWKNKTPHQWGGGGGGGGGGADGRGSRTWAGEAPLLPK
RHAFLRRSHPTATTATYASSRSGTTHNNGEARTGGGGESASTAAAAAARA
AASAAGVDEFWPRTQILGMNGGRLPRRVRQAPIDRPLTAPCGKVGRRRVR
TRGGNKGAANRP*
back to top

mRNA from alignment at E-siliculosus-1a_M_contig84:561177..567038+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig84.16557.1 ID=mRNA_E-siliculosus-1a_M_contig84.16557.1|Name=mRNA_E-siliculosus-1a_M_contig84.16557.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5862bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig84:561177..567038+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGCCGTCCTAATGGCCAAATGCGAGAGGCTTCGGCAGGCTTACTCGGA
TTACAAGGTAAGGACGCAGCAGTAGTCTAATAGGTCAGAATTCACGCGAA
CCTGCTCTTTCGTATATTGCTTCTTCTTTCTTCGAAGCGGCAGCGGTAGA
CGCATGAGCCAGACGATGGTGGTTGATGTTGACAGCAGTTCTTCACGCCA
GCGACACGGTAGTTTTCTGCAACCTGCATCGGGCAGCCCCCACACCTACC
TACAGCAGTGTACCTTGTCCGTGCAACGCTATTATTGGTTCAGGGCTACT
GCTGCTGTGGGTCGAGGTTGCACTGTACACTAGGCCACTTGTAGGTCAAC
GTGCGGTCGTACAAACTGTAGGGCTAGGCTCCATGCACGTGGCGCAGGAG
TGATAGGCAAATGCACGGGTAGGTGACATGGGCAAGCCCCAAGCACGGGC
TGCACGAAAGCTTGGGCAAGGTCTGAGTATTGAAACATGTACGACAGACA
ACCCACTAGTTTAGTACACGCATTTATCAACGGACAACAGCAGCCTGTGA
GTACATGTGTTGCTGACCGAGGCTAAGCCCTCGCGTCCGTCCATTTCAGC
ATCTCTCCACGGACAACTTGTCTTTCGTGGCGGGATTGCGAGGCCGGCCT
GTCCCCGCCCCGGGTGCGGACCTCGGGCGGCGCAAGGTTCGCCGGCGGCC
CAAGCCTGATGATGTCCCCAAGGGTGAAGACGACGAGGTGAGCAAATGTG
TTCCCCTGCGCAGTAGTCTGAGGCAGCGCTATATCCATTGACGAGTTATC
AAGCGTGTTAGGTGCAGAGACTCTCCTCTGTCGCAGGCACGTCGTTGAGT
GTATGTAAGTTCGACACAACGATCGAAGCCGGCGTGCGTTTTGCAGTAGA
ACAACCGAGATCACAAAAATGGTATATGTAGTCTTTAGGGGGGGGGGTTA
TTTACATAAAATGTATTCTTGGGTTTTTAGGGGCGAAGTCCAACGAAGTC
CAACAATGGATGACGTCTATTCGTGTCCACCGCTACATACTTGAGCAAGT
CCTACTCCTATGTAGGCCTACCCTTGAAATAAGTTGGCACGATATGAACG
GATGCCAGACTCGTTTACCCCAACGCCAGATGTCATAGATTATGGAATAC
CCAGATCACGAATCGAACCCACTCGGATCGATTCAGTGCTTGTTGCTGTA
GCTGGAATGTTCAGGTTGGCTTCGCTTCTTCGAACAACATTCATTGTCGT
TCTTGTATGGATCTTACCCTGCGCTCTCTCCTCTTTCTACAACAGAAAGT
CGAGGAGGACGATGATAGCTCTCTGGAAAGCCAGGGTGCGAAACAAGCCT
GCCCGAGCCGCGCTTGCGCCCCTAGAGCAGATAAGCTGGAGGCTATGATG
GAAAAGAGGGTGGCGGCACAAACAGCCCGGCAAAAGGCGCAGTCGAGGCT
GGTGAGGTGCTGTAATTGTGCGCGTGATCTCTTTGATGCCAGCCAGTGAT
GTTGCGCATACACTTGCACTATTGCTTACAGCCTGTTTTTCTTCAGAGAA
ACTCTCAGCGTGGCGATTCCTTCTTAGAAAATGTACAAAACAACACGAAA
AGACTACCCGTTCCAGATATGACCACAACAGTCGAAAGGGATGTATGTGC
TGGATGGTTTTCAATGAGTGGAGGGAATCCGACTGGAAACTGGGCTTATT
TTGAATGAGTTTAAGCCTACATCCTATCTGAATTACACCAGTGATACCAG
CTTGTTCTAAGCAATGGCGATCTTCTTGATGGGAACTCGTCTATTCGGCT
TCAGGGCTCGGCGCGCGAGAGGTCCCAGGAGGCAGAGACCAAGCTGGAAG
AGGCCAAGGCAGAACTGGTACGCATGACCAAGGCCATCGCAGAGGTGAGA
AGCTGAGCGTTGGCAATAGAAGACGTTGTACAAACGCATGCCCCGACGCT
CCTTTCCCTGCTAAACGCCCCCCCCCCCCGATGATGGTCGGTGAACAACC
GAAAGAAAATATCTCGCTCGAAAACTACTTAGAAACGATTCTCCGGGACA
TCTTTCATGAAACCTTTCTCTTCGCGATAGCTGGGGTTGAAGGAGACTCC
GTCTCGGAACGATTGGCTCAGGCACCCCCATGGATATGTTCCCTACACCC
CCCCGCCGTCCTCCGCCCCCAAGAAAGGGTGCGCTGGCATGGACGATATT
TTGCTCCATGGTGCCGTAGCTGGAAACAACAACCCCAACGATACCTCTCT
GGTACTCCTCTTTTCCACTGGTTCCGATCTTCTTGTACTCCCCACCGCAT
ATCAATCGCCGCGTTACCCGTCGTCATCTTTGGGATGCTCGTCTGTCTGT
CCTCGCTGCGCAGGGTGACGAGAGAACGGAAGCTCTTCAGGACACGCTGC
GCAACGAAGGATCGATCAACAAGGCCGTCGCGGAAGAGCTGGATATGTTG
CTCGTGGTGAGTTAAAAAAAGCAGAATGAAAAGAAACATCCCCACTTGCT
TACAGCTGCGACCGAGCCTAGGCAGCTGCCAAACCAGACCCATACAACGA
CAAATATTTTGTCACAGACGCGCACGGTTCATGGGGACCTAGCTAGCTCT
TTCTTCATTGGGCGGGACCACCGCGAGCCAGCCATTTTCAACAGTGAAGC
TTGGCAGAACCCTCCCCGCGCAAAAAGATGAAATCTTTCGCCGCGAAGGG
GTGTGTGTGAGCCCAGGATCGGACGCAAGACCGTACAAGTAGAGGGCAGG
TGGAAACTGCGAGCGAAGGTCAATAAGCTGGAGACCTACAAGACCAACGT
TTTCTTTGCGACCGGCGGCTTCTCGTTTGTTTACTCCGGCTCTCCTTGAC
TGACGCTCTCTCCTGGGACACGCTCTCTCTCTGTCTCTGCAGGAGGCGAT
GAATCTGCGGAGGGAGTTTGTCGTTGACACCCTGCCGCCGAGGCCCACCA
CCGTGATCGTTCCCGTCAACGAGGGGGAAGAGGACAACGGTGCTCCCAGC
TACCAAGAGGACGGGTAAGCCCGCCGCGGGATGCTTCACCCGGCGCCCGG
CCATCGCCTTTTGTCAGGAGGTCCGACCCATAAATATCGAGGAGGCGTTG
AGTCCGCCATACATTGTACAACAGAAGACTACATGCAGCGTCATTTTTTT
TTCGATGAAAAAAACGCTGCTGAGATCGATGTGCCGACGAAAGACCCTTT
TTCACGTCACGCGCAAAAGAAAAAAGCACTTTCAGCAACCTTTCCCGTCA
AGCCCACACGTATGCATACCCTTTATTTACCTACAACCCAGGAGATCCCT
CGAGTCTCCCGTCATAGCACCCGGACAACAGCTCCTGGCGAGAGACGGTG
GTGGCAAGAGCGGCGGCGGCGGCGGCGGTGGCGGCCCACACGACGGCAGC
AGGGAGTGGATCCACAGCGGGCGGCTCGCGCACACGGGGATTTTCGTCCG
CCCCCCAAGGCCAAAAAGCCGCGGCGGCGGTAGCGTCAACAGAAACCCTC
CCTGCTCTCCGCAAGAAAGCAGTAGCGACCAGCAGAGAAACAGCGGCGAC
TGTAGCAGCGGTAGCAGCCGTTCGGGACTGCCGGGAGCGGCGGCGGCGGC
GGCGGCGGCGGCGGCGGCGGACGCGGCAACGGGTCGCGACGGCGGTGAGG
GGGCTGGGGTTGAGGCGGAGGCGGCGACAGGTGACTACGGCGGGGGCAGC
AAGGGCCGGTCCGAAGGGGAGGACGCCTGGTCGTGCTGCGGGAAGCCGGT
CTTGAGCGCTGGCCGTGGGTGCCAGCCGCGGGAGCCGCTCGCAACGGTGA
GAGACGTTGTTTTTGCTGTAGTGTTCGCCAGCTGGAGCGTACGTGGCGTT
TGTATTGCGCCGCACCTTTAGAGTCGCAGCTCGACGATGATGGACGGCCG
CCCGCGGGGCCCGCTGGACAGGGATATGATGAACGCGTTGGGGGGTCCGC
GGAAAGGAGTGGAACGATAATTCACCGGTTTTCCAAATGCCTGTTACGCT
TATGGTACTTGGGACCACGCCTGAGACCGGGATGTTCCCACTCTCTTCGT
GGGAAGCAACCAATCAGAAGCAAAACGAAACAAACTATCGAAAAAAAGAG
CCAAGCGGCAATCTTTCGTTCGATTCCCAGTAATACCGTTGCAGCGAGAG
CAGCAATAGCGGCTCTGCTTGCAGCGACAGCCCTGGGTCGAAGTGCCAAG
CATAATTTCGTGGCTACCACTGCCGACGCTGCCGTCGGCCCAAGCGGACG
CTTGGATACTTACCTTTTCGAACATCGTTACTTTGTTTTTCCATCGTTGG
AGCAAAACAAATAGCGGTTGATTGTGTTCAATAGTCTAGAAGCCGACACC
AAACCATTACACTATAATAGTCAGCGCTGCCCAGTCAAACGGTTTGATTT
CGGTTTCTATCGTTCGTTTGTGCTGCAGCACACCCAGATCATCTCCACGC
ATGCCGAACAAAATGTTATCGAGTGCCATGCTGGCCCCTCTCGTAACGCT
AGCCTCCCACTCTCTCGTTTGCATCGGGCGTGGGTGCGACAGCCGGAAGA
CCTGCTCCTTGATACGATCGATCCGAGGTCGAGGTTGGGCCAGCCGTTGG
ACTTTCGGGACTTCCTCCCCCGGATAGCTTGGTTGGGGCTGTCGCCAGAC
CCGGGTAAGCTCTTTTTTGTTTTTGCGCGCGCCCGCACCGTCCATCTGAC
ATCCGCCGTCGAAGTAGCTACATATCTCGGCTACCCTGTAATAATCAAGG
GCGGGGAAACCACGCCCGAAAAGGAACACAGCACAGTACCTATTCCAGAC
TAAGCGGCGACGCTACAGTAGTACTGATTGTCGGGCTGTTGTAATAGACA
TTCCTACTTGGGCCATACCGCCTGGCTGGCACCCCTACCCTTCACCCCAC
AGACGTGCAAGACCCGCCCCGTCGACTGAATCATTTCCTATTTTCGCCTG
GTCGTGAAGAGTGGCTTTCACGCACCGCGGGCGGACTCTTGCCAGAAACA
ACGCTTGGATCAGCCGATCTCCTCCCCGTAGAACTTCATCAAAGCGCAAA
GGAAAACGTTTGTTAAATTTCTCCATCAATCCCGCGCGGTGTGCCGTGGT
CTGCTGTTGATGTTGCCTTGCGTTCACGACGAAACTTCTTCATCAGTGCG
CCCTCTGCCCGGAAGCCCGGGCGACGGCACCCTCCGCCCCCACACCGCCC
CGGAAAGGCTGACGGACGCTGCCGGGCAGTGGAGCCCTCAAGGGTGGGCA
GGAGGGGACGCGAATAGAGAGTACGACCGACGAGCATCTAGGAGTAGAAA
CGGGGGGCTAGTGGGGGGTGTGTGGGCAAGCGGAGGAAGGAGGAGGCGTG
AGTCGGGGGGGGGGTTGGGGGTAGCGCATCCCCCCTCCCCGGACAGCGGC
GTCAACGCCTGGTGGAAGAACAAAACGCCCCACCAGTGGGGCGGAGGCGG
TGGCGGCGGAGGCGGCGGCGCCGACGGAAGGGGTTCGAGGACGTGGGCAG
GAGAGGCGCCTCTTCTTCCGAAGCGGCACGCGTTTCTCCGCCGATCCCAT
CCCACCGCTACGACGGCGACGTACGCGTCGTCTCGCTCGGGCACTACCCA
CAACAACGGCGAAGCGCGGACGGGCGGCGGAGGGGAAAGCGCTTCTACCG
CCGCCGCTGCTGCTGCTCGTGCCGCAGCGTCAGCCGCGGGCGTTGATGAG
TTTTGGCCAAGGACTCAGATTCTGGGGATGAACGGGGGTAGGTTGCCGAG
AAGAGTGAGGCAGGCGCCAATCGACCGGCCGCTCACCGCGCCCTGCGGGA
AGGTCGGGCGGCGGAGAGTGCGGACGCGGGGCGGCAACAAGGGGGCCGCC
AACAGACCTTGA
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig84:561177..567038+

>mRNA_E-siliculosus-1a_M_contig84.16557.1 ID=mRNA_E-siliculosus-1a_M_contig84.16557.1|Name=mRNA_E-siliculosus-1a_M_contig84.16557.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=3978bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig84:561177..567038+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGCCGTCCTAATGGCCAAATGCGAGAGGCTTCGGCAGGCTTACTCGGA
TTACAAGATGGCCGTCCTAATGGCCAAATGCGAGAGGCTTCGGCAGGCTT
ACTCGGATTACAAGCATCTCTCCACGGACAACTTGTCTTTCGTGGCGGGA
TTGCGAGGCCGGCCTGTCCCCGCCCCGGGTGCGGACCTCGGGCGGCGCAA
GGTTCGCCGGCGGCCCAAGCCTGATGATGTCCCCAAGGGTGAAGACGACG
AGCATCTCTCCACGGACAACTTGTCTTTCGTGGCGGGATTGCGAGGCCGG
CCTGTCCCCGCCCCGGGTGCGGACCTCGGGCGGCGCAAGGTTCGCCGGCG
GCCCAAGCCTGATGATGTCCCCAAGGGTGAAGACGACGAGAAAGTCGAGG
AGGACGATGATAGCTCTCTGGAAAGCCAGGGTGCGAAACAAGCCTGCCCG
AGCCGCGCTTGCGCCCCTAGAGCAGATAAGCTGGAGGCTATGATGGAAAA
GAGGGTGGCGGCACAAACAGCCCGGCAAAAGGCGCAGTCGAGGCTGAAAG
TCGAGGAGGACGATGATAGCTCTCTGGAAAGCCAGGGTGCGAAACAAGCC
TGCCCGAGCCGCGCTTGCGCCCCTAGAGCAGATAAGCTGGAGGCTATGAT
GGAAAAGAGGGTGGCGGCACAAACAGCCCGGCAAAAGGCGCAGTCGAGGC
TGGGCTCGGCGCGCGAGAGGTCCCAGGAGGCAGAGACCAAGCTGGAAGAG
GCCAAGGCAGAACTGGTACGCATGACCAAGGCCATCGCAGAGGGCTCGGC
GCGCGAGAGGTCCCAGGAGGCAGAGACCAAGCTGGAAGAGGCCAAGGCAG
AACTGGTACGCATGACCAAGGCCATCGCAGAGGGTGACGAGAGAACGGAA
GCTCTTCAGGACACGCTGCGCAACGAAGGATCGATCAACAAGGCCGTCGC
GGAAGAGCTGGATATGTTGCTCGTGGGTGACGAGAGAACGGAAGCTCTTC
AGGACACGCTGCGCAACGAAGGATCGATCAACAAGGCCGTCGCGGAAGAG
CTGGATATGTTGCTCGTGGAGGCGATGAATCTGCGGAGGGAGTTTGTCGT
TGACACCCTGCCGCCGAGGCCCACCACCGTGATCGTTCCCGTCAACGAGG
GGGAAGAGGACAACGGTGCTCCCAGCTACCAAGAGGACGGGAGGCGATGA
ATCTGCGGAGGGAGTTTGTCGTTGACACCCTGCCGCCGAGGCCCACCACC
GTGATCGTTCCCGTCAACGAGGGGGAAGAGGACAACGGTGCTCCCAGCTA
CCAAGAGGACGGGAGATCCCTCGAGTCTCCCGTCATAGCACCCGGACAAC
AGCTCCTGGCGAGAGACGGTGGTGGCAAGAGCGGCGGCGGCGGCGGCGGT
GGCGGCCCACACGACGGCAGCAGGGAGTGGATCCACAGCGGGCGGCTCGC
GCACACGGGGATTTTCGTCCGCCCCCCAAGGCCAAAAAGCCGCGGCGGCG
GTAGCGTCAACAGAAACCCTCCCTGCTCTCCGCAAGAAAGCAGTAGCGAC
CAGCAGAGAAACAGCGGCGACTGTAGCAGCGGTAGCAGCCGTTCGGGACT
GCCGGGAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGACGCGGCAA
CGGGTCGCGACGGCGGTGAGGGGGCTGGGGTTGAGGCGGAGGCGGCGACA
GGTGACTACGGCGGGGGCAGCAAGGGCCGGTCCGAAGGGGAGGACGCCTG
GTCGTGCTGCGGGAAGCCGGTCTTGAGCGCTGGCCGTGGGTGCCAGCCGC
GGGAGCCGCTCGCAACGGAGATCCCTCGAGTCTCCCGTCATAGCACCCGG
ACAACAGCTCCTGGCGAGAGACGGTGGTGGCAAGAGCGGCGGCGGCGGCG
GCGGTGGCGGCCCACACGACGGCAGCAGGGAGTGGATCCACAGCGGGCGG
CTCGCGCACACGGGGATTTTCGTCCGCCCCCCAAGGCCAAAAAGCCGCGG
CGGCGGTAGCGTCAACAGAAACCCTCCCTGCTCTCCGCAAGAAAGCAGTA
GCGACCAGCAGAGAAACAGCGGCGACTGTAGCAGCGGTAGCAGCCGTTCG
GGACTGCCGGGAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGACGC
GGCAACGGGTCGCGACGGCGGTGAGGGGGCTGGGGTTGAGGCGGAGGCGG
CGACAGGTGACTACGGCGGGGGCAGCAAGGGCCGGTCCGAAGGGGAGGAC
GCCTGGTCGTGCTGCGGGAAGCCGGTCTTGAGCGCTGGCCGTGGGTGCCA
GCCGCGGGAGCCGCTCGCAACGCCGGAAGACCTGCTCCTTGATACGATCG
ATCCGAGGTCGAGGTTGGGCCAGCCGTTGGACTTTCGGGACTTCCTCCCC
CGGATAGCTTGGTTGGGGCTGTCGCCAGACCCGGCCGGAAGACCTGCTCC
TTGATACGATCGATCCGAGGTCGAGGTTGGGCCAGCCGTTGGACTTTCGG
GACTTCCTCCCCCGGATAGCTTGGTTGGGGCTGTCGCCAGACCCGGTGCG
CCCTCTGCCCGGAAGCCCGGGCGACGGCACCCTCCGCCCCCACACCGCCC
CGGAAAGGCTGACGGACGCTGCCGGGCAGTGGAGCCCTCAAGGGTGGGCA
GGAGGGGACGCGAATAGAGAGTACGACCGACGAGCATCTAGGAGTAGAAA
CGGGGGGCTAGTGGGGGGTGTGTGGGCAAGCGGAGGAAGGAGGAGGCGTG
AGTCGGGGGGGGGGTTGGGGGTAGCGCATCCCCCCTCCCCGGACAGCGGC
GTCAACGCCTGGTGGAAGAACAAAACGCCCCACCAGTGGGGCGGAGGCGG
TGGCGGCGGAGGCGGCGGCGCCGACGGAAGGGGTTCGAGGACGTGGGCAG
GAGAGGCGCCTCTTCTTCCGAAGCGGCACGCGTTTCTCCGCCGATCCCAT
CCCACCGCTACGACGGCGACGTACGCGTCGTCTCGCTCGGGCACTACCCA
CAACAACGGCGAAGCGCGGACGGGCGGCGGAGGGGAAAGCGCTTCTACCG
CCGCCGCTGCTGCTGCTCGTGCCGCAGCGTCAGCCGCGGGCGTTGATGAG
TTTTGGCCAAGGACTCAGATTCTGGGGATGAACGGGGGTAGGTTGCCGAG
AAGAGTGAGGCAGGCGCCAATCGACCGGCCGCTCACCGCGCCCTGCGGGA
AGGTCGGGCGGCGGAGAGTGCGGACGCGGGGCGGCAACAAGGGGGCCGCC
AACAGACCTTGATGCGCCCTCTGCCCGGAAGCCCGGGCGACGGCACCCTC
CGCCCCCACACCGCCCCGGAAAGGCTGACGGACGCTGCCGGGCAGTGGAG
CCCTCAAGGGTGGGCAGGAGGGGACGCGAATAGAGAGTACGACCGACGAG
CATCTAGGAGTAGAAACGGGGGGCTAGTGGGGGGTGTGTGGGCAAGCGGA
GGAAGGAGGAGGCGTGAGTCGGGGGGGGGGTTGGGGGTAGCGCATCCCCC
CTCCCCGGACAGCGGCGTCAACGCCTGGTGGAAGAACAAAACGCCCCACC
AGTGGGGCGGAGGCGGTGGCGGCGGAGGCGGCGGCGCCGACGGAAGGGGT
TCGAGGACGTGGGCAGGAGAGGCGCCTCTTCTTCCGAAGCGGCACGCGTT
TCTCCGCCGATCCCATCCCACCGCTACGACGGCGACGTACGCGTCGTCTC
GCTCGGGCACTACCCACAACAACGGCGAAGCGCGGACGGGCGGCGGAGGG
GAAAGCGCTTCTACCGCCGCCGCTGCTGCTGCTCGTGCCGCAGCGTCAGC
CGCGGGCGTTGATGAGTTTTGGCCAAGGACTCAGATTCTGGGGATGAACG
GGGGTAGGTTGCCGAGAAGAGTGAGGCAGGCGCCAATCGACCGGCCGCTC
ACCGCGCCCTGCGGGAAGGTCGGGCGGCGGAGAGTGCGGACGCGGGGCGG
CAACAAGGGGGCCGCCAACAGACCTTGA
back to top