mRNA_E-siliculosus-1a_M_contig84.16549.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig84.16549.1 vs. uniprot
Match: D8LQ14_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ14_ECTSI) HSP 1 Score: 652 bits (1682), Expect = 8.270e-228 Identity = 363/368 (98.64%), Postives = 364/368 (98.91%), Query Frame = 1
Query: 1 MGCPFAQLSPLLLLSCLVLFFQFGASFLSPKPLLASLQRGRSLTDASAAGVGSSSRSRAXXXXXXXXXXXXXXXXXXXXXXXXXGPRMLGVSDVLAPPELQLQSDEGFEGEPLAWTESLGSGGPLFFADLLRTQASTLEVELALGRSPVPRCMDTVCNPERRSRVRNLIYTGDRVRKVRMSYLDTPDMQVYSTVAYSAPGHDFPLLGLSAMAMGSVRVLALDLQPLFPSEDYAAKYADANAKLKAIRNKYPQLGEELRKDYYKGSPFFSDSMMYARWGPKEEADGFMDKVVMPAFRECIQAYVEIVNQAPAHAPGSPTEQAVLERQAEFDRFHAEREQVRPILTSKFGASFADTYVSDFLFAYGGGQR 1104
MGCPFAQLSPLLLLSCLVLFFQFGASFLSPKPLLASLQRGRSL DASA GVGSSSRSRAXXXXXXXXXXXXXXXXXXXXXXXXXGPRMLGVSDVLAPPELQLQSDEGFEGEPLAWTESLGSGGPLFFADLLRTQASTLE ELALGRSPVPRCMDTVCNPERRSRVRNLIYTGDRVRKVRMSYLDTPDMQVYSTVAYSAPGHDFPLLGLSAMAMGSVRVLALDLQPLFP EDYAAKYADANAKLKAIRNKYPQLGEELRKDYYKGSPFFSDSMMYARWGPKEEADGFMDKVVMPAFREC+QAYVEIVNQAPAHAPGSPTEQAVLERQAEFDRFHAEREQVRPILTSKFGASFADTYVSDFLFAYGGGQR
Sbjct: 1 MGCPFAQLSPLLLLSCLVLFFQFGASFLSPKPLLASLQRGRSLADASA-GVGSSSRSRAXXXXXXXXXXXXXXXXXXXXXXXXXGPRMLGVSDVLAPPELQLQSDEGFEGEPLAWTESLGSGGPLFFADLLRTQASTLEFELALGRSPVPRCMDTVCNPERRSRVRNLIYTGDRVRKVRMSYLDTPDMQVYSTVAYSAPGHDFPLLGLSAMAMGSVRVLALDLQPLFPGEDYAAKYADANAKLKAIRNKYPQLGEELRKDYYKGSPFFSDSMMYARWGPKEEADGFMDKVVMPAFRECMQAYVEIVNQAPAHAPGSPTEQAVLERQAEFDRFHAEREQVRPILTSKFGASFADTYVSDFLFAYGGGQR 367
BLAST of mRNA_E-siliculosus-1a_M_contig84.16549.1 vs. uniprot
Match: A0A6H5K0Q7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Q7_9PHAE) HSP 1 Score: 303 bits (776), Expect = 2.590e-94 Identity = 189/190 (99.47%), Postives = 189/190 (99.47%), Query Frame = 1
Query: 1 MGCPFAQLSPLLLLSCLVLFFQFGASFLSPKPLLASLQRGRSLTDASAAGVGSSSRSRAXXXXXXXXXXXXXXXXXXXXXXXXXGPRMLGVSDVLAPPELQLQSDEGFEGEPLAWTESLGSGGPLFFADLLRTQASTLEVELALGRSPVPRCMDTVCNPERRSRVRNLIYTGDRVRKVRMSYLDTPDMQV 570
MGCPFAQLSPLLLLSCLVLFFQFGASFLSPKPLLASLQRGRSLTDASA GVGSSSRSRAXXXXXXXXXXXXXXXXXXXXXXXXXGPRMLGVSDVLAPPELQLQSDEGFEGEPLAWTESLGSGGPLFFADLLRTQASTLEVELALGRSPVPRCMDTVCNPERRSRVRNLIYTGDRVRKVRMSYLDTPDMQV
Sbjct: 1 MGCPFAQLSPLLLLSCLVLFFQFGASFLSPKPLLASLQRGRSLTDASA-GVGSSSRSRAXXXXXXXXXXXXXXXXXXXXXXXXXGPRMLGVSDVLAPPELQLQSDEGFEGEPLAWTESLGSGGPLFFADLLRTQASTLEVELALGRSPVPRCMDTVCNPERRSRVRNLIYTGDRVRKVRMSYLDTPDMQV 189
BLAST of mRNA_E-siliculosus-1a_M_contig84.16549.1 vs. uniprot
Match: I4IE70_9CHRO (15,16-dihydrobiliverdin:ferredoxin oxidoreductase n=8 Tax=Microcystaceae TaxID=1890449 RepID=I4IE70_9CHRO) HSP 1 Score: 110 bits (274), Expect = 3.170e-23 Identity = 60/194 (30.93%), Postives = 115/194 (59.28%), Query Frame = 1
Query: 508 YTGDRVRKVRMSYLDTPDM-QVYSTVAYSAPGHDFPLLGLSAMAMGSVRVLA-LDLQPLFPSEDYAAKYADANAKLKAIRNKYPQLGEELRKDYYKGSPFFSDSMMYARWGPKEEADGFMDKVVMPAFRECIQAYVEIVNQAPAHAPGSPTEQAVLERQAEFDRFHAEREQVRPILTSKFGASFADTYVSDFLF 1083
Y + RK+R +Y++ + Q++++V Y + +D PLLG+ +A G ++L LD QPLF +DY KY + +++IR+KYP L ++L YY + +FS +++A K +A+ + K + PA++E IQ Y +++ +A + ++ ++ Q ++DR+ AER+ + +S FG +++ ++ FLF
Sbjct: 58 YQCPQFRKIRYTYINAGETAQIFNSVIYPSYNYDLPLLGIDFLAFGKKKILVVLDFQPLFRDQDYLTKYIEP---MRSIRDKYPDLAQDLPMKYYDANQYFSPYLLFA----KTDAETVV-KQLFPAYQEFIQLYWQLLEKAQP-LTSAAAQEPIIAAQKDYDRYSAERDPASGLFSSYFGQEWSEKFLHQFLF 242
BLAST of mRNA_E-siliculosus-1a_M_contig84.16549.1 vs. uniprot
Match: A0A7S1DEG3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DEG3_CYCTE) HSP 1 Score: 105 bits (263), Expect = 3.260e-21 Identity = 80/256 (31.25%), Postives = 129/256 (50.39%), Query Frame = 1
Query: 343 WTESLGSGGPLFFADLLRTQASTLEVELALGRSPVP-----RCMDTVCNPERRSRVRNLIYTGDRVRKVRMSYLDT-PDMQVYSTVAYSAPGHDFPLLGLSAMAMG--SVRVLALDLQPLFPSE-DYAAKYADANAKLKAIRNKYPQLGEELRKDYYKGSPFFSDSMMYARWGPKEEADGFMDKVVMPAFRECIQAYVEIVNQAPAHAPGSPTEQAVLERQAEFDRFHAEREQVRPILTSKFGASFADTYVSDFLF 1083
W S+ L FA+ LE L+ R P+P +D + +S + NL + D RK+RMS+ D +QV + Y P ++ P+LG+ G + ++A D QP+ SE D+A Y +K IR KYP L + YY + F+D M+++R+ + + ++D V+PA +E +A+V ++ + P V+ERQA FD + AER+Q + +KFG +A+ +V DFLF
Sbjct: 67 WNTSVSPNQRLVFAEFWNWHLDFLESNLSNLR-PLPATNRDNSIDFSLVQDEKSHMVNLCFRSDEYRKIRMSHFDGGKQIQVLQALWYPDPKYNLPVLGIEMAQFGGGTGHMMASDFQPIHDSESDHAVLYTPL---IKKIREKYPLLQGRMSDRYYDYT-HFNDFMLFSRF----DDERYIDTDVVPAVKEYTRAHVNMIQELKPDDTAIPK---VMERQAAFDTYFAERDQAIHMFKAKFGKQWAEDFVYDFLF 310
BLAST of mRNA_E-siliculosus-1a_M_contig84.16549.1 vs. uniprot
Match: A0A6U3U630_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3U630_9STRA) HSP 1 Score: 104 bits (259), Expect = 1.850e-20 Identity = 78/282 (27.66%), Postives = 140/282 (49.65%), Query Frame = 1
Query: 283 LAPPELQLQSDEGFEGEPLAWTESLGSGGP---LFFADLLRTQASTLEVELALGRSPVPRCMDTVC---------NPERRSRVRNLIYTGDRVRKVRMSYLDTPDM-QVYSTVAYSAPGHDFPLLGLSAMAMGSVRVLAL-DLQPLFPSE-DYAAKYADANAKLKAIRNKYPQLGEELRKDYYKGSPFFSDSMMYARWGPKEEADGFMDKVVMPAFRECIQAYVEIVNQAPAHAPGSPTEQAVLERQAEFDRFHAEREQVRPILTSKFGASFADTYVSDFLF 1083
L+PP + +E + W S+ + G L + Q S ++ L+ R+ VP C D N ++++R+ N+ D RK+RM+Y D QV++++ Y P ++ P+LG+ ++ + L + D QP+ +E D+A +D KLK+IR Y L ++ +Y + FFS M++ R+ + + + + VMPAF+ +Q + ++V T VL+RQA +D + AER+ + + FG +++ +V DFLF
Sbjct: 65 LSPPLSIMTIEEAESRHEMPWKTSIDNDGDDSSLLYMPFWEWQISFIQKNLSNVRA-VP-CSDPNIHQHDYHYNENKQKKARIVNICLQSDEYRKIRMTYYDAGSKTQVFNSLWYPRPEYNLPVLGIDLLSFNQKKYLTIVDFQPIQENEADHAC--SDYEEKLKSIRKDYKNLQGQMSPRFYDETLFFSKQMIFGRF----DTEKVVHEEVMPAFQRYVQTHYDMVLNTTPDVSSKSTSN-VLDRQAAYDSYSAERDPATKMFEAMFGVDWSEGFVHDFLF 337
BLAST of mRNA_E-siliculosus-1a_M_contig84.16549.1 vs. uniprot
Match: K9PVB2_9CYAN (15,16-dihydrobiliverdin:ferredoxin oxidoreductase n=2 Tax=Pseudanabaenales TaxID=2881377 RepID=K9PVB2_9CYAN) HSP 1 Score: 102 bits (253), Expect = 2.290e-20 Identity = 59/195 (30.26%), Postives = 112/195 (57.44%), Query Frame = 1
Query: 508 YTGDRVRKVRMSYLDTPDM-QVYSTVAYSAPGHDFPLLGLSAMAMGSVRVLA-LDLQPLFPSEDYAAKYADANAKLKAIRNKYPQLGEELRKDYYKGSPFFSDSMMYARWGPKEEADGFMDKVVMPAFRECIQAYVEIV-NQAPAHAPGSPTEQAVLERQAEFDRFHAEREQVRPILTSKFGASFADTYVSDFLF 1083
Y +RK+R +Y++ M Q++++V Y + G+D PLLG+ +A G ++L LD QPLF E Y KY + +KAIR++Y +L ++L +Y + +FS +++A K +AD ++ + +PAF+E + Y ++ N P P + + + ++D++ A+R+ + S FG +++ ++ +FLF
Sbjct: 47 YQSPELRKIRYTYINAGKMAQIFNSVLYPSYGYDMPLLGIDFLAFGQKKILVVLDFQPLFRDEGYMEKYIEP---VKAIRDRYDELAQDLPMRFYDAAQYFSPYLLFA----KTDADTVVNSL-LPAFKEYLDLYCTMLKNLKPTDDPERIAK--ITQAHKDYDQYSADRDPAAGLFNSYFGHEWSEQFLHEFLF 231
BLAST of mRNA_E-siliculosus-1a_M_contig84.16549.1 vs. uniprot
Match: A0A8K2A7H3_9CYAN (15,16-dihydrobiliverdin:ferredoxin oxidoreductase n=1 Tax=Petrachloros mirabilis ULC683 TaxID=2781853 RepID=A0A8K2A7H3_9CYAN) HSP 1 Score: 100 bits (250), Expect = 3.940e-20 Identity = 56/200 (28.00%), Postives = 111/200 (55.50%), Query Frame = 1
Query: 493 VRNLIYTGDRVRKVRMSYLDT-PDMQVYSTVAYSAPGHDFPLLGLSAMAMGSVR-VLALDLQPLFPSEDYAAKYADANAKLKAIRNKYPQLGEELRKDYYKGSPFFSDSMMYARWGPKEEADGFMDKVVMPAFRECIQAYVEIVNQAPAHAPGSPTE-QAVLERQAEFDRFHAEREQVRPILTSKFGASFADTYVSDFLF 1083
+R+ Y +RK+R +Y+D Q+ ++V Y P ++ PLLG+ ++ G V+ ++ +D QPLF EDY KY LK +R++YP L + L +Y + +FS +++A+ + ++ V AF++ + Y +++ A P + Q +++ Q ++D++ A+R+ + +S FG +A+ ++ +FLF
Sbjct: 42 IRSWCYQCPELRKIRYTYIDAGSSAQILNSVIYPHPAYELPLLGIDFLSFGQVKNLIVMDFQPLFQDEDYLRKYIYP---LKQLRDRYPDLAQNLEMKFYDANQYFSQYLLFAKTDAQT-----VETRVFAAFKDYLDLYWQMLETAKPFT--EPVDIQRIVQAQKDYDQYSADRDPASGLFSSYFGHEWAERFLYEFLF 231
BLAST of mRNA_E-siliculosus-1a_M_contig84.16549.1 vs. uniprot
Match: A0A6P0SIH7_9CYAN (15,16-dihydrobiliverdin:ferredoxin oxidoreductase n=27 Tax=Moorena TaxID=1155738 RepID=A0A6P0SIH7_9CYAN) HSP 1 Score: 100 bits (250), Expect = 4.120e-20 Identity = 63/223 (28.25%), Postives = 121/223 (54.26%), Query Frame = 1
Query: 430 LGRSPVPRCMDTVCNPERRSR--VRNLIYTGDRVRKVRMSYLDT-PDMQVYSTVAYSAPGHDFPLLGLSAMAMGSVRVLA-LDLQPLFPSEDYAAKYADANAKLKAIRNKYPQLGEELRKDYYKGSPFFSDSMMYARWGPKEEADGFMDKVVMPAFRECIQAYVEIVNQA-PAHAPGSPTEQAVLERQAEFDRFHAEREQVRPILTSKFGASFADTYVSDFLF 1083
L P+P ++ + + R +++ Y +RK+R +Y+D P QV+++V Y + +D PLLG+ ++ G ++L LD QPLF E Y KY + ++AIR++Y L + L +Y + +FS +++A+ E + V A+++ + Y ++V QA P P Q +++ Q ++D++ A+R+ + +S FG +A+ ++ +FLF
Sbjct: 19 LSSQPIPPGLERQVSDRAKHRAIIQSWCYQCPELRKIRYTYMDVGPASQVFNSVIYPSHCYDLPLLGIDFLSFGKKKILVVLDFQPLFRDEAYQEKYIEP---MRAIRDRYQDLAQNLEMKFYDANQYFSKYLLFAKIDSLET----VKTQVFEAYKDYLALYWQMVEQAQPLTDPEDI--QRIVKAQKDYDQYSADRDPAHGLFSSYFGPEWAEQFLYEFLF 232
BLAST of mRNA_E-siliculosus-1a_M_contig84.16549.1 vs. uniprot
Match: A0A7S2GVA5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GVA5_9STRA) HSP 1 Score: 103 bits (258), Expect = 5.690e-20 Identity = 68/208 (32.69%), Postives = 118/208 (56.73%), Query Frame = 1
Query: 472 NPERRSRVRNLIYTGDRVRKVRMSYLDTPDM-QVYSTVAYSAPGHDFPLLGLSAMAMGSVRVLAL-DLQPLFPSED-YAAKYADANAKLKAIRNKYPQLGEELRKDYYKGSPFFSDSMMYARWGPKEEADGFMDKVVMPAFRECIQAYVEIV-NQAPAHAPGSPTEQAVLERQAEFDRFHAEREQVRPILTSKFGASFADTYVSDFLF 1083
N ++ +R+ N+ + D RK+RM+Y D QV+++V Y P ++ P+LG+ +A + LA+ D QP+ +E+ +A Y LK IR+ YP L + +Y + FFS M+++R+ E+ + D+ PAF+ I +V+++ N P S + VLERQA +D + AER+ +LT+ FG ++++Y+ +FLF
Sbjct: 201 NEQKGARIVNMCFESDEYRKIRMTYYDAGQKTQVFNSVWYPHPKYNLPILGVDVLAFNQQKYLAITDYQPIHDAEEKHACTYEHL---LKPIRDDYPNLKGRMSNKFYDENQFFSKQMVFSRF---EDVNVVHDEFY-PAFQRYIMTHVDLLQNTKPDENMRSM--RFVLERQASYDTYSAERDPALGLLTAMFGTDWSESYMREFLF 399
BLAST of mRNA_E-siliculosus-1a_M_contig84.16549.1 vs. uniprot
Match: A0A845XVK2_9CYAN (15,16-dihydrobiliverdin:ferredoxin oxidoreductase (Fragment) n=1 Tax=Moorena sp. SIO3B2 TaxID=2607827 RepID=A0A845XVK2_9CYAN) HSP 1 Score: 81.6 bits (200), Expect = 5.720e-14 Identity = 50/170 (29.41%), Postives = 91/170 (53.53%), Query Frame = 1
Query: 430 LGRSPVPRCMDTVCNPERRSR--VRNLIYTGDRVRKVRMSYLDT-PDMQVYSTVAYSAPGHDFPLLGLSAMAMGSVRVLA-LDLQPLFPSEDYAAKYADANAKLKAIRNKYPQLGEELRKDYYKGSPFFSDSMMYARWGPKEEADGFMDKVVMPAFRECIQAYVEIVNQA 927
L P+P ++ + + R +++ Y +RK+R +Y+D P QV+++V Y + +D PLLG+ +A G ++L LD QPLF E Y KY + ++AIR++Y L + L +Y + +FS +++A+ E + V A+++ + Y ++V QA
Sbjct: 19 LSSQPIPPGLERQVSDRAKHRAIIQSWCYQCPELRKIRYTYMDVGPVSQVFNSVIYPSHCYDLPLLGIDFLAFGKKKILVVLDFQPLFRDEAYQEKYIEP---MRAIRDRYQDLAQNLEMKFYDANQYFSKYLLFAKIDSLET----VQTEVFEAYKDYLALYWQMVEQA 181 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig84.16549.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig84.16549.1 >prot_E-siliculosus-1a_M_contig84.16549.1 ID=prot_E-siliculosus-1a_M_contig84.16549.1|Name=mRNA_E-siliculosus-1a_M_contig84.16549.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=369bp MGCPFAQLSPLLLLSCLVLFFQFGASFLSPKPLLASLQRGRSLTDASAAGback to top mRNA from alignment at E-siliculosus-1a_M_contig84:468950..478354- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig84.16549.1 ID=mRNA_E-siliculosus-1a_M_contig84.16549.1|Name=mRNA_E-siliculosus-1a_M_contig84.16549.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=9405bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig84:468950..478354- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig84:468950..478354- >mRNA_E-siliculosus-1a_M_contig84.16549.1 ID=mRNA_E-siliculosus-1a_M_contig84.16549.1|Name=mRNA_E-siliculosus-1a_M_contig84.16549.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2214bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig84:468950..478354- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |