mRNA_E-siliculosus-1a_M_contig84.16518.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig84.16518.1
Unique NamemRNA_E-siliculosus-1a_M_contig84.16518.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig84.16518.1 vs. uniprot
Match: D8LPY3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPY3_ECTSI)

HSP 1 Score: 549 bits (1415), Expect = 1.550e-185
Identity = 361/384 (94.01%), Postives = 365/384 (95.05%), Query Frame = 2
Query:  245 MPYNYLHDAAFLGNAKLTKTLLATGAVDVNEITEEGCTPVMISAQNGHGGVTQLLIDAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVRHAFPRRQSDGSTRVALDVAAQKGFTEVVRELIQHRGIKACVGQDAGVTALDLAAKHQRVDAMRLLLAAGVVDTGDSLFTAADLGRDKAAKLLLQQKWATPGASYVDSRNDYQCTPLFVAVAAAAPKVVRLLLDAGANERLTRPVSYSFRGPLENETLLGLANRNLGCEMHKGQRATEEEMKRLEEARRLLLRVEAVRAVSWLWGTTSPAYAAPRGTGGNRDVRGGASLLGVRIARRETRAHSCGTLLATLFRYSGKT 1396
            MPYNYLHDAAF GNAKLTKTLLATGAVDVNEITEEGCTP+MISAQNGHGGVTQLLIDAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVR AFPRRQSDGSTRVALDVAAQKGFTEVVRELIQHRGIKACVGQDAGVTALDLAAKHQRVDAMRLLLAAGVVDTGDSLFTAAD GRDKA KLLLQQKWATPGA YVDSRNDYQCTPLFVAVAAAAPKVVRLLLDAGANERLTRPVSYSFRGPLENETLL LANRNLGCEMHKGQ ATEEEM RLEE RRLLLRVE VRA+SWLWGTTSP YAAP GTG NR  RGGAS LGV IARRETRAH CG+LLAT+ RYSGKT
Sbjct:    1 MPYNYLHDAAFRGNAKLTKTLLATGAVDVNEITEEGCTPLMISAQNGHGGVTQLLIDAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVRQAFPRRQSDGSTRVALDVAAQKGFTEVVRELIQHRGIKACVGQDAGVTALDLAAKHQRVDAMRLLLAAGVVDTGDSLFTAADCGRDKAVKLLLQQKWATPGAGYVDSRNDYQCTPLFVAVAAAAPKVVRLLLDAGANERLTRPVSYSFRGPLENETLLELANRNLGCEMHKGQCATEEEMNRLEEVRRLLLRVETVRAISWLWGTTSPVYAAPLGTGTNRGARGGASGLGVYIARRETRAH-CGSLLATMLRYSGKT 383          
BLAST of mRNA_E-siliculosus-1a_M_contig84.16518.1 vs. uniprot
Match: D8LPY4_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPY4_ECTSI)

HSP 1 Score: 401 bits (1031), Expect = 1.110e-127
Identity = 286/417 (68.59%), Postives = 319/417 (76.50%), Query Frame = 2
Query:  245 MPYNYLHDAAFLGNAKLTKTLLATGAVDVNEITEEGCTPVMISAQNGHGGVTQLLIDAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVRH---------------------------------AFPRRQSDGSTRVALDVAAQKGFTEVVRELIQHRGIKACVGQDAGVTALDLAAKHQRVDAMRLLLAAGVVDTGDSLFTAADLGRDKAAKLLLQQKWATPGASYVDSRNDYQCTPLFVAVAAAAPKVVRLLLDAGANERLTRPVSYSFRGPLENETLLGLANRNLGCEMHKGQRATEEEMKRLEEARRLLLRVEAVRAVSWLWGTTSPAYAAPRGTGGNRDVRGGASLLGVRIARRETRAHSCGTLLATLFRYSGKT 1396
            MPYN+LHDAA  G+AK+T+ LLAT A+D+NE TE+G TP+ ++AQ GH  V ++L+          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                      A PR Q DGSTRVALDVAAQKG +EVVRELIQ+RGIK C G   G  AL+LA KHQ VD MRLLLAAGVVDTG SLFTAA LGR++A KLLLQQKWATPG  Y+DSRN+  CTPLFVAV+AAAP++VRLLLDAGANE+LTRPVSYSF G ++NETLLGLA+ NL  E+H G+RAT EE  RLEE+RRLL+RVEAVRAVSWLWGTTSPAYA P GT GN+D +GGAS LGVRIARRETRAH  G LLATLFRYS KT
Sbjct:    1 MPYNHLHDAALKGSAKVTEALLATAALDINERTEDGFTPLDVAAQEGHHRVARILLRHNASVTVASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAIPRFQPDGSTRVALDVAAQKGHSEVVRELIQYRGIKTCAGVTGGAIALNLATKHQHVDTMRLLLAAGVVDTGMSLFTAATLGRERAVKLLLQQKWATPGDRYIDSRNECHCTPLFVAVSAAAPRIVRLLLDAGANEKLTRPVSYSFHGKMKNETLLGLADNNLRYEVHDGRRATSEETNRLEESRRLLMRVEAVRAVSWLWGTTSPAYAIPLGTDGNKDAKGGASRLGVRIARRETRAHRNGALLATLFRYSVKT 417          
BLAST of mRNA_E-siliculosus-1a_M_contig84.16518.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 2.320e-33
Identity = 137/425 (32.24%), Postives = 194/425 (45.65%), Query Frame = 2
Query:  254 NYLHDAAFLGNAKLTKTLLATGAVDVNEITEEGCTPVMISAQNGHGGVTQLLIDAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVRHAFPRRQSDGSTR------------------------------------VALDVAAQKGFTEVVRELIQHRGIKACVGQDAGVTALDLAAKHQRVDAMRLLLAAGVVDTGDSLFTAADLGRDKAAKLLLQQKWATPGA----SYVDSRNDYQCTPLFVAVAAA---APKVVRLLLDAGANERLTRPVSYSFRGPLENETLLGLANRNLGCEM-HKGQRATEEEMKRLEEARRLLLRVEAVRAVSWLWGTTSPAYAAPRGTGGNRDVRGGASLLGVRIARRETRAHSCGTLLATLFRYSGKT 1396
            N LH A  +G+A+LT+ +LA G V++++    G TP+M++  NGH  + ++LI  G                                                        XXXXXXXX         +  DGST                                     V LD+AA+ G T+VVRELIQ  GI+ C    AG  AL  AA +Q +D M +L  AGVVDTG +L+ AA +G + + K LL+ +    G     +Y+++R+    TPL V        AP++VR+L+DAGA+      V     G + N+T L      L  ++   G+ AT+E ++RLE   RLLLRV+AV AVSWLW + +P     R T  + +    A  L + I +R T+   CG L+ATL RYS KT
Sbjct:  107 NQLHRAVLVGSAELTQAVLAGGTVEIDQRNSYGATPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIG--RATETDPEPPLPALKLMLPILKRRTKRR-CG-LVATLLRYSVKT 527          
BLAST of mRNA_E-siliculosus-1a_M_contig84.16518.1 vs. uniprot
Match: D7FXH6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH6_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 6.710e-33
Identity = 106/249 (42.57%), Postives = 136/249 (54.62%), Query Frame = 2
Query:  665 VALDVAAQKGFTEVVRELIQHRGIKACVGQDAGVTALDLAAKHQRVDAMRLLLAAGVVDTGDSLFTAADLGRDKAAKLLLQQKWATPGASYVDSRN-DYQCTPLFVAVAAAAPKVVRLLLDAGANERLTRPVSYSF-RGPLENETLLGLANRNLGCEMHKGQRATEEEMKRLEEARRLLLRVEAVRAVSWLWGTTSPAYAAP----RGTGGNRDVRGGASLLGVRIARRETRAHSCGTLLATLFRYSGK 1393
            VALDVAAQ G  E VREL++  GI  C G   G  AL LAA  Q +  M  L  AGVVDTG +LF  A  G +   K LLQQKW TPG +YV++R+ + + TPLF+A+  A+P+VVR+LLDAGA+   T  +     R PL           N+  +  +   ATEE++  L+  RRLLLRVEA+ A SWLW +  P  A       G  G   +   A +L   I+ R T A     L+    RYS K
Sbjct:  241 VALDVAAQNGHEETVRELLRL-GIGLCGGPTRGNDALRLAAWVQHMSIMTALTDAGVVDTGTALFNVAAKGLEAPVKFLLQQKWNTPGGAYVNTRSRNAKFTPLFIAIEGASPRVVRMLLDAGADVTSTCSLPGGISRSPLSQ------CESNIRSKFCQALPATEEQLNGLQAIRRLLLRVEAIYASSWLWCSNIPCIAPAAREVEGACGKSRIPRKARML---ISWRRTGARR--VLMPASLRYSNK 477          
BLAST of mRNA_E-siliculosus-1a_M_contig84.16518.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 1.290e-32
Identity = 172/376 (45.74%), Postives = 213/376 (56.65%), Query Frame = 2
Query:  248 PYNYLHDAAFLGNAKLTKTLLATGAVDVNEITEEGCTPVMISAQNGHGGVTQLLIDAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVRHA---------------------------------FPRRQSDGSTRVALDVAAQKGFTEVVRELIQHRGIKACVGQDAGVTALDLAAKHQRVDAMRLLLAAGVVDTGDSLFTAADLGRDKAAKLLLQQKW-ATPGASYVDSRNDYQC-TPLFVAVAAA--APKVVRLLLDAGANERLTRPVSYSFRGPLENETLLGLANRNLGCEMHKGQRATEEEMKRLEEARRLLLRVEAVRAVSWLWGTTSPAYAAP 1264
            P N LH AA  G+++ T++LLA G +D+++    G TP+M +A+ GH  V ++L++ G           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                        P R S G+T V LD AA  G   V REL+Q  GI+ C G  AGV AL  AA  Q +D M LL  AGVVDTG++L     LGR++A K LL+QK   T   +Y  +  D +  TPL  AV     +P+VVRLL+DAGA+  L   V   F G     T L  A R L  ++     AT ++++ L  +RRLLL+VE V A SWLWG  +   AAP
Sbjct:   11 PRNELHKAALDGSSQRTESLLAGGRIDIDQGDPRGWTPLMFAAEEGHSNVIKVLLNRGASLLPVDDDDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLPTRMSSGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQKGEGTARTTYASTPRDGRGHTPLLSAVTTGPCSPRVVRLLVDAGADATLAVRVPDGF-GRSTKYTPLDCATRCLAEKVVDEDFATAQQLRNLRASRRLLLQVEVVHATSWLWGGHAGCPAAP 385          
BLAST of mRNA_E-siliculosus-1a_M_contig84.16518.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 4.690e-29
Identity = 103/260 (39.62%), Postives = 138/260 (53.08%), Query Frame = 2
Query:  653 GSTRVALDVAAQKGFTEVVRELIQHRGIKACVGQDAGVTALDLAAKHQRVDAMRLLL-AAGVVDTGDSLFTAADLGRDKAAKLLLQQKWATPGASYVDSRNDYQCTPLFVAVAAAA-----PKVVRLLLDAGANERLTRPVSYSFRGPL---ENETLLGLANRNLGCEMHKGQRATEEEMKRLEEARRLLLRVEAVRAVSWLWGTTSPAYAAPRGTGGNRDVRGGASLLGVR----IARRETRAHSCGTLLATLFRYSGK 1393
            G + V L++AA  G  +V RE+I+  GI+ C G   GV AL  AA  + ++ M +LL A GVVDTG +L  AA+ GR  A K LL+++ A   A    +R+ Y  TP+  AV   A     PK+VRLL+DAGAN   TR V  +   P     +ET L    R L      G+ AT+E+++RL++ R LL R EAV AVSWLW +  P   A        +    A    +R    + RR+      G LL TLFRYS K
Sbjct:  180 GVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQADADAYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANT--TRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTR--GVLLKTLFRYSRK 435          
BLAST of mRNA_E-siliculosus-1a_M_contig84.16518.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 1.460e-28
Identity = 104/249 (41.77%), Postives = 133/249 (53.41%), Query Frame = 2
Query:  671 LDVAAQKGFTEVVRELIQHRGIKACVGQDAGVTALDLAAKHQRVDAMRLLLAAGVVDTGDSLFTAADLGRDKAAKLLLQQ---KWATPGASYVDSRNDYQCTPLFVAVAAAAPKVVRLLLDAGANERLTRPVSYSFRGPLENE---TLLGLANRNLGCEMHKGQRATEEEMKRLEEARRLLLRVEAVRAVSWLWGTTSPA--YAAPRGTGGNRDVRGGASLLGVRIARRETRAHSCGTLLATLFRYSGK 1393
            LDVAAQ G  EVV ELI+  GI  C G   G  AL  AA   R+D M +L  AGVVDTG +L  AA  G +   K LL+Q   + +T  A+Y+++ N    T L   +    P+VV+LL++AGA+   T PV    + P E++   T LGL    LG    K    T EE  +LE  RRLLLR EAV AVSWLW + +P   +A  +GTG        A+   + +  R TR      LLA L RYS K
Sbjct:  190 LDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTSLLDGIQRCRPRVVQLLVEAGADT--TSPVLICNQ-PGEDDFHITPLGLTMCLLGGRSAKP--LTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRK--GLLAALLRYSSK 431          
BLAST of mRNA_E-siliculosus-1a_M_contig84.16518.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 9.010e-28
Identity = 101/254 (39.76%), Postives = 135/254 (53.15%), Query Frame = 2
Query:  653 GSTRVALDVAAQKGFTEVVRELIQHRGIKACVGQDAGVTALDLAAKHQRVDAMRLLLAAGVVDTGDSLFTAADLGRDKAAKLLLQQKWATPG---ASYVDSRNDYQCTPLFVAVAAAAPKVVRLLLDAGANERLTRPVSYSFRGPLENETLLGLANRNLGCEMHKGQR--ATEEEMKRLEEARRLLLRVEAVRAVSWLWGT--TSPAYAAPRGTGGNRDVRGGASLLGVRIARRETRAHSCGTLLATLFRYSGK 1393
            G T + LD AA+ G  EVV ELI+  GI  C G   GV AL  AA+ + ++ M +L  AGVVDTG +L  AA  G +   K LL+Q  A      A+YV++R+    TPL   +    P+VVRLL++AGA+      V     G   + T LGL    +  ++    R  A+ E++ +LE  RRLLLRVEAV AVSWLW +  ++   AA RGT     +   A  L + + RR  R       LA L RYS K
Sbjct:  184 GRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGIQHYRPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAIST-AVTLPMLVTRRRARGRKVP--LAALLRYSSK 434          
BLAST of mRNA_E-siliculosus-1a_M_contig84.16518.1 vs. uniprot
Match: D7FNJ3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNJ3_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 2.170e-27
Identity = 81/205 (39.51%), Postives = 122/205 (59.51%), Query Frame = 2
Query:  671 LDVAAQKGFTEVVRELIQHRGIKACVGQDAGVTALDLAAKHQRVDAMRLLLAAGVVDTGDSLFTAADLGRDKAAKLLLQQKWATPGASYVDSRNDYQCTPLFVAVAAAAPKVVRLLLDAGANERLTRPVSYSFR--GPLENETLLGLANRNLGCEMHKGQRATEEEMKRLEEARRLLLRVEAVRAVSWLWGTTSPAYAAPRGTGG 1279
            LD A+++G   VVREL+ + G+KAC G   G  AL +AA+  RV  + +L  AGVVD G ++  AA  GR+ + + LL+Q+ AT    Y ++R++   T  + A   A P++ R LLDAGA+E LT  V    R       +T L L  R+L  + ++ + AT+++M RL+  RRLLL+++AVRA+SW W    P+   P+G  G
Sbjct:  216 LDAASERGHESVVRELL-NLGLKACGGPSRGRDALFMAAQDNRVGVLTMLRDAGVVDRGKAIVAAAGFGREASVRFLLKQERATTRIDYANTRDEAGRTLFYRAAWGAYPRIGRWLLDAGADETLTSVVQPFLRYDNMRFEDTALKLVLRSLSSKQYRFEPATDDQMLRLQAFRRLLLQIDAVRAISWPWPIPVPSI--PQGVSG 417          
BLAST of mRNA_E-siliculosus-1a_M_contig84.16518.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 3.760e-25
Identity = 103/257 (40.08%), Postives = 131/257 (50.97%), Query Frame = 2
Query:  671 LDVAAQKGFTEVVRELIQHRGIKACVGQDAGVTALDLAAKHQRVDAMRLLLAAGVVDTGDSLFTAADLGRDKAAKLLLQQKWATPG--ASYVDSRNDYQC--TPLFVAV-----AAAAPKVVRLLLDAGANERLTRPVSYSFR-GPLENE-TLLGLANRNLGCEMHKGQRATEEEMKRLEEARRLLLRVEAVRAVSWLWGTTSPAYAAPRGTGGNRDVRGGASLLG-----VRIARRETRAHSCGTLLATLFRYSGK 1393
            LD AAQ G   VV EL+Q  GI+ C G   GVTAL LAA    +D M  L  AGVVDTG +L  A   G     K LLQQ+  TP   ++YV    D  C  TPL   +      + +PKVVRLL+DAGA+   T  V ++ + G L    T L LA   L  ++   +   +E ++RLE  RRLLLRVEAV A SWLW    P    P G     +    ++        + I RR  RA   G + A+L RY+ K
Sbjct:  187 LDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVSRPRD-PCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADT--TSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRR--RARGRGFVSASLCRYAVK 438          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig84.16518.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D8LPY3_ECTSI1.550e-18594.01EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LPY4_ECTSI1.110e-12768.59EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP... [more]
D7FT11_ECTSI2.320e-3332.24EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FXH6_ECTSI6.710e-3342.57Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D8LL76_ECTSI1.290e-3245.74EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G1H7_ECTSI4.690e-2939.62EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1... [more]
A0A6H5KQV0_9PHAE1.460e-2841.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJA9_9PHAE9.010e-2839.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNJ3_ECTSI2.170e-2739.51EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FVK3_ECTSI3.760e-2540.08EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig84contigE-siliculosus-1a_M_contig84:77870..86306 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1155
Model size2870
Exons3
Ec32 orthologEc-15_001670.1
Ec32 ortholog descriptionEsV-1-199
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.G
EggNOG OGsCOG0666@1,KOG4177@2759
EggNOG free text desc.response to abiotic stimulus
Seed eggNOG ortholog2880.D8LPY3
Seed ortholog evalue1.5e-155
Seed ortholog score555.8
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig84.16518.1prot_E-siliculosus-1a_M_contig84.16518.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig84 83247..84835 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936282.716757-UTR-E-siliculosus-1a_M_contig84:77869..780071622936282.716757-UTR-E-siliculosus-1a_M_contig84:77869..78007Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig84 77870..78007 +
1696251007.1673143-UTR-E-siliculosus-1a_M_contig84:77869..780071696251007.1673143-UTR-E-siliculosus-1a_M_contig84:77869..78007Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig84 77870..78007 +
1622936282.7297132-UTR-E-siliculosus-1a_M_contig84:83140..832461622936282.7297132-UTR-E-siliculosus-1a_M_contig84:83140..83246Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig84 83141..83246 +
1696251007.1805835-UTR-E-siliculosus-1a_M_contig84:83140..832461696251007.1805835-UTR-E-siliculosus-1a_M_contig84:83140..83246Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig84 83141..83246 +
1622936282.777615-UTR-E-siliculosus-1a_M_contig84:84835..863061622936282.777615-UTR-E-siliculosus-1a_M_contig84:84835..86306Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig84 84836..86306 +
1696251007.2140625-UTR-E-siliculosus-1a_M_contig84:84835..863061696251007.2140625-UTR-E-siliculosus-1a_M_contig84:84835..86306Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig84 84836..86306 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936282.7443912-CDS-E-siliculosus-1a_M_contig84:83246..843821622936282.7443912-CDS-E-siliculosus-1a_M_contig84:83246..84382Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig84 83247..84382 +
1696251007.1905246-CDS-E-siliculosus-1a_M_contig84:83246..843821696251007.1905246-CDS-E-siliculosus-1a_M_contig84:83246..84382Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig84 83247..84382 +
1622936282.760794-CDS-E-siliculosus-1a_M_contig84:84816..848351622936282.760794-CDS-E-siliculosus-1a_M_contig84:84816..84835Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig84 84817..84835 +
1696251007.2025962-CDS-E-siliculosus-1a_M_contig84:84816..848351696251007.2025962-CDS-E-siliculosus-1a_M_contig84:84816..84835Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig84 84817..84835 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig84.16518.1

>prot_E-siliculosus-1a_M_contig84.16518.1 ID=prot_E-siliculosus-1a_M_contig84.16518.1|Name=mRNA_E-siliculosus-1a_M_contig84.16518.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=385bp
MPYNYLHDAAFLGNAKLTKTLLATGAVDVNEITEEGCTPVMISAQNGHGG
VTQLLIDAGADLDAVTDEGVTSLHQAADGGHSEILSMLVKAGANPDTQTY
NGSTPLYDAAFHGHLDIVRKLLRLGVRHAFPRRQSDGSTRVALDVAAQKG
FTEVVRELIQHRGIKACVGQDAGVTALDLAAKHQRVDAMRLLLAAGVVDT
GDSLFTAADLGRDKAAKLLLQQKWATPGASYVDSRNDYQCTPLFVAVAAA
APKVVRLLLDAGANERLTRPVSYSFRGPLENETLLGLANRNLGCEMHKGQ
RATEEEMKRLEEARRLLLRVEAVRAVSWLWGTTSPAYAAPRGTGGNRDVR
GGASLLGVRIARRETRAHSCGTLLATLFRYSGKT*
back to top

mRNA from alignment at E-siliculosus-1a_M_contig84:77870..86306+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig84.16518.1 ID=mRNA_E-siliculosus-1a_M_contig84.16518.1|Name=mRNA_E-siliculosus-1a_M_contig84.16518.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=8437bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig84:77870..86306+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
GCCAATCACTCCACCCTCTGTGCTGGCACCCCGCGTGATCGAGGGGCACT GGGGATAAGCTTGCTGCTGCGAACACGAGATCCTGCTGACCGAGGAGGAG CGAGAAGTAGTGGCTACAGCAGTTGGGACTCGAGCTGAGTGAGTGGTAGA CGCAAAAAGGCGCGTGTTCTTTCGTTCCCGCTCTGCAGTCGTGAGTCTGT GCCGTATAAACATGAGACAAAAACCGTGCCCGAGGCTATACACAGCAGGA GCGTGCACCTCCCTTAGTTTGCTGACAAGTACAGCAGTGGTGAACTCTGA CCGGCTCGTACTTGCGTATTGCTGTAGTGTGTAAAGCGGGTGTGCACGTG CAAAACAACCTATCCTATCAAAGGCAAGGGCCACAACATCGATTGACCTG CTGGGTACATGTTTTTTCATGATGGATGCGGCGGAATCCGCGTGTTGGCG TGTTGGCCCCGGTTTTCTCTCTCTCCTCTCTCTCCTCTCTCTCGGTCCAG GTGCAATTTTTGGTCCTCACTCAGGAAAAACTCGCCGCGTTCTTGTAGCT AGCACGAACTTTTGTTACGGACAAGAATGACCCCCCTCAAGCTCGGTTTC AACTCTGCCTCGAAGAAAACACTTGGTTCTTGCAAGAGCTCCAGTAAAGG CAGATGGAAAATATTTCGCGTACATCCTGCTGTGCATGTTTTTTTCGTCT TATTTTCATCACTCGAACTACACATATACTGCTGTATGATGTAAGGGGAA TGATTGACCCCCCGCCCCCCAATCGGGCGGGCGACCAGAATGCGCGGGAA GTCTGCCCAGATAGTGCATACGAAGGTGTGAACGGTTGTACGGTGGGAAA ATAATTTAACAAATGATTATGTCCGTGGCGACAGATTGTAACAGTTGTGT AAAATGTCCCATCTACATGTAGTCTATCTATCTAAATATGTATCTTTCCT TGTATTTTGTTCTAGCACCGGCTGGCATCTCTGATACAAATCTTTCAGTG TAAGGCTTGAACAAACTCAAAAAATAAGCCCAGCTTCCAGCCGGTTTCCC TCCATTCACTTTTAAGGCATGAGCATATCCCTCTCGACGGGATTTATATC TCGAACGGGTAGTCTTCCTGTGAGATTATGTTTACTTCAAAAAAGGTCGA AGAAATGGAATCATGATGTGCAGAGGTGCATACAGCAATGCACGTTGAAG AGTGTTGTTGACGATGAAATACGTTAATATGGTTGCAGTACGCACGAGGA GTGGATCGTTCATTCCATGTGAATAGTGCGCACGTGGCATTGGTTGTTAG GGGGGTTGAAGGTTTTGGCGTGTATATTCATCCGAGAATATGTTCAACGC ATACTCACGGTTCGACAGATTTGTTCACGGAAAAGAAGAAAAGTGAATGA TTTTGCCGGGTGTGTGTTCTCGACTCGGAGATCGCGAGTTCTACTGCGAA ACACGCGTGCGACGGCGCTAAACAGGCATGGGCGTGAGGGTACCGACGAG AATCATGCGAGCCCTTGAGAGGGATGGGCAACCATAGGCTCGCTGCCCGG AGCGGCAGGAATTCCGAAGCGTCAGAAGTGGCTACATTTTTTTTGGCTAT CGTCATCGTATTGACTCAGCGCTCGTGTAAAAGTGGGTGTAGAGTTGTAT GGCGACGCACAGTTTTGGCGTCTTTTGTATTGAGCGATGGCCGCAGCACG GAGAAGTACATACACAGCATTTCAGGCGCCAACCTCATTGTTGGCAAGAT CGTTCTCACGGGACAGTACACAGCAGTTCGAGCATGGGTGAGGTTGTAAA GCGGCGTGCGGTTGGTTGTGATATGGTGTACAAATTTCTGTAAGGGATTC GTTCAACAGGTATGTGGAACGGCTGAAGCGCAACAGATATGTGCAACGGC TGAAGCAAAAGGAATGTACTATGTTAAACATTGGACCGAGACCGACGTCG CCAGCATGGTCATCGGGCGATCGATCCATATTCGCATGGAATCGCAATCC ATCAATGTCATGGATGTTCGCAGTTTCCGCCTGGCAACTGAGTTTGTCAA CGGGTACCAGTTGAGACGACAGTACGCCGTTTTGTCGCAGAATGGCGTAC GGTGACAAGAGTTCGCTTGTTATTGACGTTGCGCGGCCAATACAAAAAAC TTGACCCCACGTGCGTCCACTCTAAAATCAAGCCTATTTGACACGCGACA TCCTGTGAAAATATATTTTAACATGATCAGCGCTCACAGGATTTCTGCCG GGTAAGAGCGCTAATCCGTGGCCACACGGAAGAGTCCCCCCCCCGCGGTT GGGTTTTCGTCGCTTGGCAACGACGTTGTAAAATACGCCGCCCCCCCCGG TATTTGCCATCGGGGTTGGGTTTTCGTTGCTTGGCATCGACTTTGTAAAA CAAGCCCCCCCCTCGGTGTGTGCCATCGGGATTGGGTTTTCGTCGCTTGG CAACGACTTTGTAAAACAAGCCGATTCACTTCGTGAACTCGGCAACCAGG TTACCGTTTTTGTTTTTACCTCTGTTTTTTTTTTTGGCGGTAACCATAAT GGTGGTCTAGTAGATCATGTTGTGCGGGGTGGAGAACCCTCACTCCGCAC AAGGGGGATGATCGCACCACGTTGTGTTAAAATGGTCAAGCATCCTCGAG GCAGTTACACAGTGCTTACAGCTGTCTCTGGAAGTGAAGGCACCAGAAAA TAAATTAAGTCATACGAAGCTGTCATCCGTACGCAAGGAAGTAAGCACAA GATGCCGAACACCTTTAGCAGGATGCAGCGCACCCTTCATGCGACTCGCC GAATACCTCACGGCGCTTCGCGCTTGGTGATGTGAGAGCCTGGTCCGGTG AGAACCCGGCGTGCTCCGTCCCGGCTTTGTAGGGATGCGAGGTCAATGGT CTAACGACGACGGCATGCACGACTATGAGTACACCCCCCCCCCCTGCTGC CCCCTATCCACCCCTCCTGCGGTGCTATTATAGCCTTCGGTTCTTAACGG GAGAAGAGTGCAGCGCTCTCTTCCCTCAAAGTGTACACACGAACTACGCG GCGCTTTCCACGACCAGGAACGCAAGCGAGAGAAAAACGTCGACATATTA CATGAAGAGCTCGCCTACGACGGCGGTTTAAAAACCCCTTGACCCTGGCC ACGAGGTTGCGACGACACCAACTAGATTACGGGGGTGACCATAGGCACCA TATATTTATGGCCCTTGGGCACCTAGCTTCGTACTCGGGCGAAGTACTGA CTGATTAGGGTCACTTCCAGAGTGAAAATAGGCAAAAACTTCGGTAAAGT GGCCAATCTCCTGCACGTTTTGGGTACGTCTGGGGCAGACGCACAATTTG GGCGGTGATATGTTTGTATAGTTTGTAGACTTGGGCTAGACCGCGGTGCT TCGCACTCGTTCGTTCTCATCTTCCCGATAAAACGTCTTTTGCTAAGACT TTGGTGATGAGCGGAGTTGATTTCATGAGGCGCCCTTCATTAACTGGTTG ATTGTGTGGGGGTTGTCGCATCAGAGCTTGACCGAAGTATTTCATCGGGC AACTCTTACTCCTTCGCACGGTACATGCCGCATCGGAGACCTTGTACTGG TGTAAAGCCCAAGATGGGCCGTGAGCCACCTGTCCAGTATTGTTTGCTGT TTTTCTGGCAGTCGGCAAGTGGCAATTGTGAGCGATTTTCCGTTTTCTGT GTGCCAGCGGTCTCGGTCCGTTTTCGCGGCTCGATGTGTACAGTTAGCGT CCGCACTTCAGAACTTGTGGCAGTTAAAAAAATGAGCCTCGAAGAGCTCG GAATCTAAGAAGTTGAGCACAGTTTCTGAGTTCGGTTAAGAACCCTACAC AAACCCGATACCAGCGGCCATTCGTAGCACAACCCCAGGAACTTAAACCC CGATTTATGGGAACAAAATCTTGTCGATAAATCTTGATCTTGGCCAAGAT CTGCCAGTTTCACGATTTATGGGAGCAAAATCTTCCGATATATCTTGGCC AAGATTTCTCGAGGTCCGAAATCTACCCTTTCGAACAAATCTTGCCCCAA GATCTGTCGAAACGAGCCTTCCGACAAATCTTGAGGCGGCGTAACAAATC TTGCCTGGGTCCGGCGCGATCACCGAAGGTCAGTCGACCTAATACCCCAT AACGCCATGAAATCTGCACGTGGCACACTCGCAAGGGTCTCTAACGCACA CTGGCGTCACTGTGTCGGCGCCACGGGCGCCGACAGCGAACGAAAACGAC CAAGGCGCGCGAAAAAAATGCGTATTCACCCTGGCTCGTTCCACGTGCGT CATCACCAGTCTGTCGAGGGGCCGTTCAAAGAGTACTTTATTTTGAAGTA GAAAAATAGAGGAGGAGGAACGTTTTGCCAACACAGCTCTGTCGTGTGCG ACGCTTCTATCTCTTCATCGAATCACCCCACACCCAATCCCTTTGCACCC GAGCCAGATCCGTGAGTGCAGATGACAGCGCCGGAGGTTTGACCTCGGTA CGCCTGCTAGTGAGATACGTGCACGGGTGTCATCGGCTTCGGGTTGATGC ACTTTCTTGTCAGTTGGACAGCAATCGAACAATTTTGTTTCTCCGCTCGA CATGAGCTCGTGGGCAACGGCTTCTACTTTGCACCCCAGGTAGGCGCCCA TCGCTAGTATCCACCGACAGTGTTGAAGCAATACAGCTGGGGGAGGGACG CTCCTTCTACACTGCGTCATGGTCACTTTTCGCCACACCTTGGCATTTTC TGTGGACCAAGTGGCCGTTGTGCCTTTATCAACTTCAAGCAGGAGAGAGG GACAACCCGCCGCTTTTTCAACATTCGACATATTTCCCCCATAAATCGCG ATACTGCAAATCTTGGTGGAGATATATTGTGAGCAAATCTCGGGTCAAAA TGCCAAGATATATTTGCAAGATTCTATAAAGAAGGGTCTTAGAGCCCCAC CCTCGGCCTCAACTAAAGGTTAAGGTTCTAAAGTGCGGGCACTATCTGTA CATGAGTGGAAACGAAACGAACCCGTTAAGGAACTACCGCTAAGAAAGCT GGTTTCCTGTCTCATTTGTCGAGGTCACTGCACTCTTTCGCATCTGTCGG GTCCCATGTACTCAGGAACCAAGGGGCCCTAGATATTCCGCATACCTGCT TCGTGCCTCGCGCATTTCATGGGTTGAGGGCGCCACGAGAAGCAAACGCT TCGACTCAGCTGACGCCACACCCGTCCGTCCTCTGTTTCGATTTTCCCAA AATCTTTGGAACTCTGTTCAGGTGGCAGGCAATCCCGCCGCCAGGCTATC TTCCACGACCAGGGAACAGCAACTCGTAGGCTGCCAAGAGAGCTTGCGGC AGCCGCAGCCCCAAGGGAAACCAAGCAATGCCCTACAACTATCTGCACGA TGCTGCTTTTCTGGGCAACGCCAAGCTCACAAAAACCCTGCTTGCGACGG GGGCGGTGGACGTCAACGAAATCACGGAAGAGGGGTGCACTCCCGTAATG ATATCCGCCCAGAATGGACACGGTGGTGTGACCCAGTTGCTCATCGATGC TGGTGCCGACCTGGACGCCGTTACCGACGAAGGCGTGACGAGCCTTCACC AAGCCGCCGATGGCGGGCACTCGGAGATCTTATCGATGCTGGTGAAGGCT GGTGCGAACCCCGACACTCAAACATACAACGGAAGCACCCCGCTGTACGA CGCGGCGTTCCATGGCCACCTCGACATCGTCAGGAAGCTCCTCCGCTTGG GCGTGAGGCATGCCTTCCCGAGGAGGCAGTCGGATGGGTCGACCCGCGTT GCTTTGGATGTGGCGGCGCAAAAGGGGTTCACGGAGGTGGTCCGGGAGCT GATCCAGCACCGCGGGATCAAGGCGTGTGTGGGTCAAGATGCCGGCGTGA CTGCTCTCGACTTGGCCGCGAAGCATCAACGGGTCGATGCCATGAGGCTG TTGCTGGCCGCGGGGGTCGTGGACACGGGCGATTCTTTGTTCACGGCCGC CGACCTTGGCCGTGACAAGGCCGCCAAACTTCTCCTGCAGCAAAAGTGGG CCACTCCTGGAGCCAGCTACGTGGACAGCCGCAACGACTATCAATGCACG CCCCTGTTCGTTGCTGTCGCCGCCGCGGCCCCGAAGGTCGTGAGGTTGCT GCTTGACGCCGGGGCTAATGAGAGGCTGACCAGACCCGTGTCGTACTCGT TCCGCGGGCCGTTGGAGAACGAGACTCTCCTGGGGCTCGCGAACCGCAAC CTTGGTTGCGAGATGCACAAGGGCCAACGAGCGACAGAGGAGGAAATGAA GCGTCTGGAGGAAGCCCGGCGCTTGCTGTTGCGAGTGGAAGCCGTTCGCG CGGTATCCTGGCTCTGGGGCACTACCAGCCCTGCGTACGCCGCCCCACGG GGGACTGGTGGCAACAGAGACGTCAGGGGAGGGGCGTCGTTGCTGGGAGT CCGTATCGCGAGGCGCGAAACCAGAGCGCACAGCTGTGGCACTCTCTTGG CGACCCTGTTCAGGTAAGCTATTCCGGTACCAATTTATTGTACAGAGATG CGCGTATGACGTTGACCGCCTAAGATGTGGTGTTCGGGAGCGTTTGTCGA CGCCTAGATGTATCACGGTCCACCCTACGGGCTACTCTCTTGTTGTCCCA TTTGCGCATTCCACTGGCTAACATCTCGTCCTTTCGCACGCCAGTTCGTC CTGTGGGTTGACTTTGATCGGTGTTACTGGATTTTGATCTACAATGTGGT TCGAATCTCGCAACTCATTGTGATTAAAATTTCCGTGTACCGCGGGACGG CCTGATTTGATGTGTTGTGTTTACCTCCCCACTAGAGGGCGTTGTGATTT GCGCTGCACAGTCTATCTGGGACAGAGAAGATAAGCACCCTAATTTCGAT AATCGCACCGCGTGGGCTCGTCATCGGCTCGCACCCGCTGCGTCCAGGTA CTCGGGCAAGACGTGAACGGGCCCGTTTCTACCGATTAGAGCCAGCTTGC TCCCAGACGTTCTCGGTCGTGCCGACGGACGGATGTGTATTTTGTTAACG TCCCCGCAGCTCCTAACGTGCGCGCTGGTGCCCATGCCTTGTAAGTTGGA CGTTTGACTTCGTGCACTTTGGTGGAGAGACCGCTGGACTCGCGAACTTC GCTCGGACCGCTTGCGATTTTGCGTTTTCGGCCAAGCCCGCGGCAGTGGG CCCCATACCTGGATTATTTTCTTCCGTTAGACACCTGGTAGCGACAGCTG TGGCTGGACACCCCCTCTATGTTCCACAATGCAGCCCCGCAAATGTGGGG GCGGGAAAAGTATGTAAGCACTGCGGTTGAACCCTTTGATCATGTCATTT TAGTGTGTGGGCGTTTCAGTATCCTTGTAAAGAATCGGTTGGACCCTTCT GCAGCCGCAGCTCTAGGAGGGGGGAACTGTTTGGGACTTTCCGAATGCGA TTCCGCGGAGAGCGAACAGAAACAGCGCAGCGCATTAGATGTACATGTAG TCATGGACTCGCTGAGATGTTCGGAGAACCTACAATGTGTATTGTGTATC AAGAACGTGATGTAGCATCGCGTAGTTGAATGAAAGGCACCCAGGGCCTT CAAAAACAATATGCGCTCGCCGCGTACGTTGCATCTCGTGGGAGATGTCC AAAACACTTCCTTGTCGTTACGTGTGAAGGCAAAGTTCTCAGGTTAGACC ACGACAGAGCATTACTCACGTACGATAGCACCCGATCTTGGTTGCTTAAG TGTAAGAGCGTACCGCGTGCGTTCTGTTCGGACAAGCTTCAGCCGACCAC ATTTTCATTTCGGCTGCGCACACGAATGACTATACATCAGATGCACCAGC AAGCCAATGCTGAAAAGCAGCGTTAGATGCCTGTTCTCCTTCGGGGCTCA TGTCATTTTGGGCGGTGTGCGCTAGTTGCCCGGAATCAAACGTGTGTCTC ATAGCTTGTTGTACGAGCTTGCTCATGTCATTGTTGTTGTCGTCACCGTT TTTACTCTATTCTAGAAGTATGTGGCAGGTCACGGTTGCGACTTGCAGAA GTAAATTCAACTTTGCCGCTTTTTGGTATCTCTCACGCACCGAGGAAGAC ACAGATCGGACTAATGCGTGTCGCGTATTGTGGGTGGGGCGCACGTTTTG AAAGAGCTATTTCTCTTTTTTTTAGGCCATGGCTGCGAACAGAAGACGAG GGAGCATTCCTTCGCTTGTTTCAAAAGTACTTGTCGCCCTGGGCCATGGC TGACTTTTTCGAGGTTAGCAGAAACGGTCTTGCGTGTCTTCGGGTTTTGA CGAGTACGATCGGGATCCCGTTTCTCAGCTGTCTTATGTCTTTTTCCACA CTCTTGTGTGTGGTACTTCTCTGCGCTTGTCACAGTTTTCACGACGAACT GCCTGACGGAACGGATTGTGTGCCAAGTGTCATGTGC
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig84:77870..86306+

>mRNA_E-siliculosus-1a_M_contig84.16518.1 ID=mRNA_E-siliculosus-1a_M_contig84.16518.1|Name=mRNA_E-siliculosus-1a_M_contig84.16518.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2310bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig84:77870..86306+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGCCCTACAACTATCTGCACGATGCTGCTTTTCTGGGCAACGCCAAGCT
CACAAAAACCCTGCTTGCGACGGGGGCGGTGGACGTCAACGAAATCACGG
AAGAGGGGTGCACTCCCGTAATGATATCCGCCCAGAATGGACACGGTGGT
GTGACCCAGTTGCTCATCGATGCTGGTGCCGACCTGGACGCCGTTACCGA
CGAAGGCGTGACGAGCCTTCACCAAGCCGCCGATGGCGGGCACTCGGAGA
TCTTATCGATGCTGGTGAAGGCTGGTGCGAACCCCGACACTCAAACATAC
AACGGAAGCACCCCGCTGTACGACGCGGCGTTCCATGGCCACCTCGACAT
CGTCAGGAAGCTCCTCCGCTTGGGCGTGAGGCATGCCTTCCCGAGGAGGC
AGTCGGATGGGTCGACCCGCGTTGCTTTGGATGTGGCGGCGCAAAAGGGG
TTCACGGAGGTGGTCCGGGAGCTGATCCAGCACCGCGGGATCAAGGCGTG
TGTGGGTCAAGATGCCGGCGTGACTGCTCTCGACTTGGCCGCGAAGCATC
AACGGGTCGATGCCATGAGGCTGTTGCTGGCCGCGGGGGTCGTGGACACG
GGCGATTCTTTGTTCACGGCCGCCGACCTTGGCCGTGACAAGGCCGCCAA
ACTTCTCCTGCAGCAAAAGTGGGCCACTCCTGGAGCCAGCTACGTGGACA
GCCGCAACGACTATCAATGCACGCCCCTGTTCGTTGCTGTCGCCGCCGCG
GCCCCGAAGGTCGTGAGGTTGCTGCTTGACGCCGGGGCTAATGAGAGGCT
GACCAGACCCGTGTCGTACTCGTTCCGCGGGCCGTTGGAGAACGAGACTC
TCCTGGGGCTCGCGAACCGCAACCTTGGTTGCGAGATGCACAAGGGCCAA
CGAGCGACAGAGGAGGAAATGAAGCGTCTGGAGGAAGCCCGGCGCTTGCT
GTTGCGAGTGGAAGCCGTTCGCGCGGTATCCTGGCTCTGGGGCACTACCA
GCCCTGCGTACGCCGCCCCACGGGGGACTGGTGGCAACAGAGACGTCAGG
GGAGGGGCGTCGTTGCTGGGAGTCCGTATCGCGAGGCGCGAAACCAGAGC
GCACAGCTGTGGCACTCTCTTGGCGACCCTGTTCAGATGCCCTACAACTA
TCTGCACGATGCTGCTTTTCTGGGCAACGCCAAGCTCACAAAAACCCTGC
TTGCGACGGGGGCGGTGGACGTCAACGAAATCACGGAAGAGGGGTGCACT
CCCGTAATGATATCCGCCCAGAATGGACACGGTGGTGTGACCCAGTTGCT
CATCGATGCTGGTGCCGACCTGGACGCCGTTACCGACGAAGGCGTGACGA
GCCTTCACCAAGCCGCCGATGGCGGGCACTCGGAGATCTTATCGATGCTG
GTGAAGGCTGGTGCGAACCCCGACACTCAAACATACAACGGAAGCACCCC
GCTGTACGACGCGGCGTTCCATGGCCACCTCGACATCGTCAGGAAGCTCC
TCCGCTTGGGCGTGAGGCATGCCTTCCCGAGGAGGCAGTCGGATGGGTCG
ACCCGCGTTGCTTTGGATGTGGCGGCGCAAAAGGGGTTCACGGAGGTGGT
CCGGGAGCTGATCCAGCACCGCGGGATCAAGGCGTGTGTGGGTCAAGATG
CCGGCGTGACTGCTCTCGACTTGGCCGCGAAGCATCAACGGGTCGATGCC
ATGAGGCTGTTGCTGGCCGCGGGGGTCGTGGACACGGGCGATTCTTTGTT
CACGGCCGCCGACCTTGGCCGTGACAAGGCCGCCAAACTTCTCCTGCAGC
AAAAGTGGGCCACTCCTGGAGCCAGCTACGTGGACAGCCGCAACGACTAT
CAATGCACGCCCCTGTTCGTTGCTGTCGCCGCCGCGGCCCCGAAGGTCGT
GAGGTTGCTGCTTGACGCCGGGGCTAATGAGAGGCTGACCAGACCCGTGT
CGTACTCGTTCCGCGGGCCGTTGGAGAACGAGACTCTCCTGGGGCTCGCG
AACCGCAACCTTGGTTGCGAGATGCACAAGGGCCAACGAGCGACAGAGGA
GGAAATGAAGCGTCTGGAGGAAGCCCGGCGCTTGCTGTTGCGAGTGGAAG
CCGTTCGCGCGGTATCCTGGCTCTGGGGCACTACCAGCCCTGCGTACGCC
GCCCCACGGGGGACTGGTGGCAACAGAGACGTCAGGGGAGGGGCGTCGTT
GCTGGGAGTCCGTATCGCGAGGCGCGAAACCAGAGCGCACAGCTGTGGCA
CTCTCTTGGCGACCCTGTTCAGGTACTCGGGCAAGACGTGAGTACTCGGG
CAAGACGTGA
back to top