mRNA_E-siliculosus-1a_M_contig83.16502.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig83.16502.1 vs. uniprot
Match: D7FZF8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF8_ECTSI) HSP 1 Score: 898 bits (2320), Expect = 0.000e+0 Identity = 506/509 (99.41%), Postives = 506/509 (99.41%), Query Frame = 1
Query: 376 DCTSMDLVNHNITDYIRWSNMSDRLYLENGACVTLTDIYESRSDDTGNKGPLYPFDETTLDISDTVTGSWYLESTLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINLRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGIAYKVRGFCKDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHDNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDVSDGRPRNNHIFDNSLVSDNEVVKMLNSDDTAFEGNVVYGRVSRFKDSFNTLWKSNFVEDGIHDYKLELNSCFDPESDIEEPDTYEDVAAMEEEEATTYXXXXXXXXXVSESGFFC 1902
DCTSMDLVNHNITDYIRWSNMSDRLYLENGACVTLTDIYESR DDTGNKGPLYPFDETTLDISDTVTGSWYLESTLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINLRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEVITDP ETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGIAYKVRGFCKDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMH NIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDVSDGRPRNNHIFDNSLVSDNEVVKMLNSDDTAFEGNVVYGRVSRFKDSFNTLWKSNFVEDGIHDYKLELNSCFDPESDIEEPDTYEDVAAMEEEEATTYXXXXXXXXXVSESGFFC
Sbjct: 50 DCTSMDLVNHNITDYIRWSNMSDRLYLENGACVTLTDIYESRLDDTGNKGPLYPFDETTLDISDTVTGSWYLESTLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINLRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEVITDPAETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGIAYKVRGFCKDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHHNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDVSDGRPRNNHIFDNSLVSDNEVVKMLNSDDTAFEGNVVYGRVSRFKDSFNTLWKSNFVEDGIHDYKLELNSCFDPESDIEEPDTYEDVAAMEEEEATTYXXXXXXXXXVSESGFFC 558
BLAST of mRNA_E-siliculosus-1a_M_contig83.16502.1 vs. uniprot
Match: A0A6H5KBD3_9PHAE (MEP17 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD3_9PHAE) HSP 1 Score: 810 bits (2092), Expect = 7.680e-286 Identity = 465/504 (92.26%), Postives = 473/504 (93.85%), Query Frame = 1
Query: 451 YLENGACVTLTDIYESRSDDTGNKGPLYPFDETTLDISDTVTGSWYLESTLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINLRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVNH--------------------LGWYDSESYGIAYKVRGFCKDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHDNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDVSDGRPRNNHIFDNSLVSDNEVVKMLNSDDTAFEGNVVYGRVSRFKDSFNTLWKSNFVEDGIHDYKLELNSCFDPESDIEEPDTYEDVAAMEEEEATTYXXXXXXXXXVSESGFFC 1902
YLENGACVTLTDIYESRSDD+GNKGPLYPFDET LDISDTVTGSWYLES+LYITEGSRLVVQGLSKGGDCDHLLLASSPEKFIN+RAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVN LGWYDSESYGI+YKVRGFC DLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMH NIGYGFDPHDDSDY+TIHNNEV XXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYG+KNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDVSDGR RNNHIFDNSLVSDN+VVKMLNSDDTAFEGNVVYGRVSRFK+SFNTLWKSNFVEDGIHDYKLELNSCFDPESDIEEPDTYEDVAAMEEEEATTY XXXX VSESGFFC
Sbjct: 35 YLENGACVTLTDIYESRSDDSGNKGPLYPFDETALDISDTVTGSWYLESSLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINVRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVNRTTQTSHSAPLTSRLPQYKTDLGWYDSESYGISYKVRGFCTDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHHNIGYGFDPHDDSDYLTIHNNEVYXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGSKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDVSDGRLRNNHIFDNSLVSDNQVVKMLNSDDTAFEGNVVYGRVSRFKNSFNTLWKSNFVEDGIHDYKLELNSCFDPESDIEEPDTYEDVAAMEEEEATTYSXXXXFD--VSESGFFC 536
BLAST of mRNA_E-siliculosus-1a_M_contig83.16502.1 vs. uniprot
Match: D7FZF9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZF9_ECTSI) HSP 1 Score: 630 bits (1626), Expect = 3.760e-215 Identity = 355/477 (74.42%), Postives = 400/477 (83.86%), Query Frame = 1
Query: 376 DCTSMDLVNHNITDYIRWSNMSDRLYLENGACVTLTDIYESRSDD-TG-NKGPLYPFDETTLDISDTVTGSWYLESTLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINLRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGIAYKVRGFCKDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHDNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDV--SDGRPRNNHIFDNSLVSDNEVVKMLNSDDTAFEGNVVYGRVSRFKDSFNTLWKSNFVEDGIHDYKLELNSCFDPESDIE 1794
+C MDLVNHNITDYIRWS MSDRLYLENGAC T+TDIYESR D TG NKGP+YPFDETT I++ VTGSWYL S+LY+TEG+RLVVQGLSKGGDCDHLLLASS EKFIN+RA+GGE+MLDGTHVESWDL GTVDEN +DGRSYLSAISEVI +P C+G A NDMGEARMDIIDSE+NHLG Y+SESYGIAYKVRGFC DLSNPELF++V VTGDILGS IH YFGHYSYGHQGGNWS+N +HDN+GYGFDPHDDSDY+TI NN XXXXXXXXXXXXXXXXXXXXXXXXXXXGH+ +AG+ TGN XXXXXXXXXX MDSGVA+YESS C +S N + NKNGIRMS+GS++NL +EN I+ING D +YAIYLY+GND P V SDGRPRNN +FDNSL+SDN VV N+DD EGN ++GR SRF DSFNTLW N V D +H++KLE SCFDPESD++
Sbjct: 40 NCPPMDLVNHNITDYIRWSTMSDRLYLENGACATMTDIYESRIDTYTGENKGPVYPFDETTGGITNNVTGSWYLGSSLYVTEGARLVVQGLSKGGDCDHLLLASSAEKFINVRAYGGEIMLDGTHVESWDLLEGTVDENYDDGRSYLSAISEVIINPAMECEGMATNDMGEARMDIIDSEINHLGHYESESYGIAYKVRGFCNDLSNPELFETVGVTGDILGSHIHHLYFGHYSYGHQGGNWSYNTVHDNVGYGFDPHDDSDYVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHVTDAGKITGNGIMLHXXXXXXXXXXNVVENNMDSGVAVYESSNCEISQNNLSRNKNGIRMSMGSANNLAFENHIVINGEDERYAIYLYRGNDTPAVEGSDGRPRNNRVFDNSLMSDNAVVMARNADDNIIEGNTIFGRESRFVDSFNTLWYGNSVPD-VHEFKLEDGSCFDPESDMD 515
BLAST of mRNA_E-siliculosus-1a_M_contig83.16502.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 357 bits (917), Expect = 6.450e-110 Identity = 210/469 (44.78%), Postives = 273/469 (58.21%), Query Frame = 1
Query: 421 IRWSNMSDRLYLEN------GACVTLTDIYESRSDDTGNKGPLYPFDETTLDISDTVTGSWYLESTLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINLRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGIAYKVRGFCKDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHDNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDV-SDGRPRNNHIFDNSLVSDNEVVKMLNSDDTAFEGNVVY-----GRVSRFKDSFNTLWKSNF-VEDGIHDYKLELNSCFDPESD 1788
IR++ + RLYLE+ G C TL I+ESR+ K PLY D + D+S+T TG+W L LY+ +G L V G +GGD D L L S+ E +INLRAHGG L GT V SWD + + DE+ DGRSY+SA+SE++TD ETC+G AKN MGEARMDI +SE+ +LG+ DSESYG+ +KVRGFCKD SNPE+FD V+V G++ SDIH FG Y+YGHQ G+W NKMHDN GYGFDPHDDSD++TIH+NEV G+ G T D+G+A+ ES VS+N NK G+RMS+G +DN+ EN I N +KY Y Y G+D PDV S GR +NN NS E +K+ +D T F NV G V RF D+ N++ + N +++G + K+ +SCFD ESD
Sbjct: 51 IRYAGTTKRLYLESADGETRGGCATLGQIWESRA----GKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQ-------GNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNN---SKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESD 505
BLAST of mRNA_E-siliculosus-1a_M_contig83.16502.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 347 bits (890), Expect = 5.150e-106 Identity = 207/470 (44.04%), Postives = 268/470 (57.02%), Query Frame = 1
Query: 421 IRWSNMSDRLYLEN-------GACVTLTDIYESRSDDTGNKGPLYPFDETTLDISDTVTGSWYLESTLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINLRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGIAYKVRGFCKDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHDNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDV-SDGRPRNNHIFDNSLVSDNEVVKMLNSDDTAFEGNVVY-----GRVSRFKDSFNTLWKSNF-VEDGIHDYKLELNSCFDPESD 1788
IR++ + RLYLE+ G CVTL I+ESR+ KGPLY D + ++S + TG+W L LY+ +G L V G GGD D L L S+ E FINLRAHGG L T V SWD + + DE+ DGRSY+SAISE+ITD ETC+G AKN MGEARMDI SE+ +LG++DSESYG+ +KVRGFC+D SNPE+FD V+V G++ SDIH FG Y+YGHQ G+W NKMHDN GYGFDPHDDSD++TIH+NEV G+ G T D+G+A+ ES VS+N NK G+R S+G +DN+ N I N A+Y Y Y G D PDV S GR +NN NS E +K+ +D T F NV G V RF ++ L + N ++DG + K++ ++CFD E+D
Sbjct: 46 IRYAGTTARLYLESADNGTTRGGCVTLGQIWESRA----GKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQ-------GNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNN---AEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEAD 501
BLAST of mRNA_E-siliculosus-1a_M_contig83.16502.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE) HSP 1 Score: 333 bits (855), Expect = 5.100e-101 Identity = 217/473 (45.88%), Postives = 289/473 (61.10%), Query Frame = 1
Query: 400 NHNITDYIRWSNMSDRLYLEN------GACVTLTDIYESRSDDTGNKGPLYPFDETTLDISDTVTGSWYLESTLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINLRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGIAYKVRGFCKDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHDNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDVSD-GRPRNNHIFDNSLVSDNEVVKMLNSDDTAFEGNVVYGRVS-RFKDSFNTLWKSNFVEDGIHDYKLEL--NSCFDPESD 1788
+ +I IR+S++ +RLYLE+ G CVTL I+E + + PLY D + DISD+ TG+W L L++ +G L V G S GGD D L L S+ + FINLRAHGG L T V +WD + D + EDGRSY+SA+SEVITD ++TC+G AKN+MGEARMDI DSE+ +LG++ SESYG+ +KVRGFC D SN +LF+ V+V G+I SDIH N FG Y+YGHQ G+W NKMHDN GYGFDPHDDSD++TIH+NEV G+ G + XXXXXXXXXXXXXXX D+G+A+ ES VSDN NK GIR S+GS N+ + N +I+G +Y+ Y Y G+D PDV D GR ++N +N+++ E +K+L++D T F N + RF D+ TL N G++ KL++ + FD SD
Sbjct: 37 DESIAVSIRYSSVYERLYLESADSKTRGGCVTLEQIWEHQR----GEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQ-------GNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNN--VISGS-TRYSTYSYLGSDAPDVVDSGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFEDATTIRFNDAKKTLMSGNI---GLNMSKLKVVNGASFDASSD 492
BLAST of mRNA_E-siliculosus-1a_M_contig83.16502.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA) HSP 1 Score: 316 bits (810), Expect = 1.800e-94 Identity = 202/464 (43.53%), Postives = 261/464 (56.25%), Query Frame = 1
Query: 421 IRWSNMSDRLYLEN------GACVTLTDIYESRSDDTGNKGPLYPFDETTLDISDTVTGSWYLESTLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINLRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGIAYKVRGFCKDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHDNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDVSD-GRPRNNHIFDNSLVSDNEVVKMLNSDDTAFEGNVVYG-RVSRFKDSFNTLWKSNFVEDGIHDYKLELNSCFDPESD 1788
IR+S S RLYLE+ G CVTL DI+ D PLY ++ D+S ++TG+W L +LY+ +G L V G S GG D L L S+ + FINLRAHGG L T V +WD + V ++ GRSY+SA+SEVITD + CDG AK +MGEARMDI DSE+ +LG++ SESYG+ +KVRG C+DLSN E+FD+V+V G+I SDIH NYFG Y+YGH+ G+W NKMH N YGFDPHDDSD++TIH+NEV XXXXXX G D+G+AL E+ VS+NK NK GIRMS+G +DN+ +NDI + +KY +Y YQG+D P V D GR ++ E VK+ +D T F N + RF+D TL N G K+ SCFD +SD
Sbjct: 44 IRYSKTSKRLYLESADGNTRGGCVTLEDIWR----DLDGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXX-------XXXXGAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGS---SKYNVYTYQGSDAPWVVDSGRSQDXXXXXXXXSGGQETVKLTMADGTEFIDNTFKSAKTIRFEDCQGTLMSGNSGLGGAS-LKVTDGSCFDKKSD 492
BLAST of mRNA_E-siliculosus-1a_M_contig83.16502.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE) HSP 1 Score: 314 bits (804), Expect = 1.450e-93 Identity = 217/464 (46.77%), Postives = 283/464 (60.99%), Query Frame = 1
Query: 421 IRWSNMSDRLYLEN------GACVTLTDIYESRSDDTGNKGPLYPFDETTLDISDTVTGSWYLESTLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINLRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGIAYKVRGFCKDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHDNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDVSD-GRPRNNHIFDNSLVSDNEVVKMLNSDDTAFEGNVVY-GRVSRFKDSFNTLWKSNFVEDGIHDYKLELNSCFDPESD 1788
IR+S S RLYLE+ G CVTL +I++ D PLY ++ D+S + TG+W L LY+ +G L V G S GG+ + L L S+ + FINLRAHGG L T V +WD + V + RSY+SA+SE+ITD E CDG AK MGEARMDI DSE+ +LG+ SESYG+ +KVRGFCKD SNPE+FD V+V G+I SDIH N+FG Y+YGH+ G+W NKMH N YGFDPHDDSD++TIH+N+VXXXXXXXXXXXXXXXXXXXXXX G XXXX D+G+AL ES VS+NK NK G+R+S+G +DN+ +N I +KY +Y Y+G+D P V D GR ++N DN++ +E +K+ +D T F N + +RF+D+ TL N G K+ +CFD +SD
Sbjct: 47 IRYSASSKRLYLESADGKTRGGCVTLEEIWK----DLDGSAPLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXX-------XXXXGSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVI---SDSSKYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKRAKTARFEDAETTLMSGN-TGLGSATLKVSKGACFDKKSD 495
BLAST of mRNA_E-siliculosus-1a_M_contig83.16502.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI) HSP 1 Score: 314 bits (804), Expect = 1.820e-92 Identity = 193/484 (39.88%), Postives = 264/484 (54.55%), Query Frame = 1
Query: 376 DCTSMDLVNHNITDYIRWSNMSDRLYLE------NGACVTLTDIYESRSDDT--GNKGPLYPFDETTLDISDTVTGSWYLESTLYITEGSRLVVQGLSKGGDCDHLLLASSPEK-------FINLRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGIAYKVRGFCKDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHDNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDVSD-GRPRNNHIFDNSLVSDNEVVKMLNSDDTAFEGNVVY--GRVSRFKDSFNTLWKSNFVEDGIHDYKLELNSCF 1773
+C S V+ IR+S + RLYLE G CVT+ I+E+R T G K PLY D + + SD +TG+W LE LY+ +G L V G GG D L L S+P +INLRAHGG L + T V WD + D + DGRSY+SA+SE++ DPT+TC+G AKN MGEARMDI++SE+ ++G++DSESYG+ +KVRGFCKD SNPE+FD V+V G+I S++H F Y+YGHQ G+W N +H N GYG+DPHDDSD++TIH+N V G+I G T D+G+A+ ESS +S N GNK GIRMS+G DN + N + ++YAIY YQG+D +V GR ++N N++V + +K+ SD T NV Y G V + N + + +ED + +L +CF
Sbjct: 114 ECNSTQAVS------IRYSATTGRLYLEAGVEGERGGCVTVEQIWEARGGGTTTGAKAPLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDTTNNSYDMDETDGRSYISAVSEIVLDPTQTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQ-------GNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVSNNTMTNT---SQYAIYTYQGSDPAEVQPTGRSQDNIFDSNTVVGGPQAIKLKESDGTRITNNVFYEPGLVEFSNTTENVVTGNVGLEDAT-EVELVEPACF 580
BLAST of mRNA_E-siliculosus-1a_M_contig83.16502.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE) HSP 1 Score: 308 bits (790), Expect = 6.660e-92 Identity = 192/481 (39.92%), Postives = 267/481 (55.51%), Query Frame = 1
Query: 376 DCTSMDLVNHNITDYIRWSNMSDRLYLEN------GACVTLTDIYESRSDDTGNKGPLYPFDETTLDISDTVTGSWYLESTLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINLRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGIAYKVRGFCKDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHDNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDVSD-GRPRNNHIFDNSLVSDNEVVKMLNSDDTAFEGNVVYGRVS-RFKDSFNTLWKSNFVEDGIHD--YKLELNSCFDPESD 1788
DC S V+ +R++ S RLY+E+ G CVTL I+E + D + PLY D + D+S + TG+W L +Y+ +G L V G+S GGD D L L S+ + FI+LRA+GG L T V +WD + D++ DGRSY+SA+SEVITD +TC+G AKN+MGEARMDI +SE+ +LG++ +E+YG+ +KVRGFC D NPELFD V+V G+I SDIH N FG Y+YGHQ G+W NKMHDN GYGFDPHDDSD++TIH+NEV G+ G D+G+A+ ES VSDN NK G+R+S+G N+ +N +I G A++ + Y G D P+V D GR ++N +N+++ E + + +D T F N + RF D+ TL N G+ D K++ + FD SD
Sbjct: 9 DCDSSIAVS------VRYNAESARLYIESANGRTRGGCVTLEQIWEQQVDGS----PLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQ-------GNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKN--VITGS-AEFNTFSYLGADKPEVVDSGRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGNT---GLADSTLKVDRGATFDESSD 466 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig83.16502.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig83.16502.1 >prot_E-siliculosus-1a_M_contig83.16502.1 ID=prot_E-siliculosus-1a_M_contig83.16502.1|Name=mRNA_E-siliculosus-1a_M_contig83.16502.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=569bp MARAAGRSSRGSGGVATAAAAALGAVALAVAVAGRSASAAETTSSSAQTTback to top mRNA from alignment at E-siliculosus-1a_M_contig83:596245..602096- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig83.16502.1 ID=mRNA_E-siliculosus-1a_M_contig83.16502.1|Name=mRNA_E-siliculosus-1a_M_contig83.16502.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5852bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig83:596245..602096- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig83:596245..602096- >mRNA_E-siliculosus-1a_M_contig83.16502.1 ID=mRNA_E-siliculosus-1a_M_contig83.16502.1|Name=mRNA_E-siliculosus-1a_M_contig83.16502.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=3414bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig83:596245..602096- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |