mRNA_E-siliculosus-1a_M_contig83.16501.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_M_contig83.16501.1
Unique Name	mRNA_E-siliculosus-1a_M_contig83.16501.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig83.16501.1 vs. uniprot
Match: D7FZF7_ECTSI (ENTH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF7_ECTSI)

HSP 1 Score: 444 bits (1141), Expect = 1.660e-152
Identity = 237/288 (82.29%), Postives = 238/288 (82.64%), Query Frame = 2

Query:  281 MALEELSTTVSKLTFNIFGSESEKKVGSFLFNEKTEWATSRELHGLAALTFNEKECAGVMAVIGKALNPKDSTWRTLNKAVRLLRHFVLYGAERCVDHAWDHQRRIEELRRYNSAMHGRTSTLNGGGTDFGGPVREAAAELDDLLKDSDAIREAREEGRTPDALLPMGAPDDYRAPVKAKGIDLGIDDAFGIVPQGSMGAKFDLKQVPGLYEGRPDRYFDDKADPRKRSQGVEDSDHTRQAQAVDLLDLDIGGETTHTTSVPEAQDLVRAGKEAALAEQLKAQQQQLE 1144
            MALEELSTTVSKLTFNIFGSESE+KVGSFLFNEK EWATSRELHGLAALTFNEKECAGVMAVIGKALNPKDSTWRTLNKAVRLLRHFVLYGAERCVDHAWDHQRRIEELRRYNSAMHGRTSTLNGGGTDFGGPVREAAAE                                              DDAFGIVPQGSMGAKFDLKQVPGLYEGRPDRYFDDKADPRKRSQGVEDSDHTRQAQAVDLLDLDIGGETT T SVPEAQDLVRAGKEA LAEQLKAQQQQLE
Sbjct:    1 MALEELSTTVSKLTFNIFGSESERKVGSFLFNEKAEWATSRELHGLAALTFNEKECAGVMAVIGKALNPKDSTWRTLNKAVRLLRHFVLYGAERCVDHAWDHQRRIEELRRYNSAMHGRTSTLNGGGTDFGGPVREAAAE----------------------------------------------DDAFGIVPQGSMGAKFDLKQVPGLYEGRPDRYFDDKADPRKRSQGVEDSDHTRQAQAVDLLDLDIGGETTPTASVPEAQDLVRAGKEATLAEQLKAQQQQLE 242

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BLAST of mRNA_E-siliculosus-1a_M_contig83.16501.1 vs. uniprot
Match: A0A835YVG9_9STRA (ENTH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVG9_9STRA)

HSP 1 Score: 276 bits (706), Expect = 5.210e-83
Identity = 144/257 (56.03%), Postives = 183/257 (71.21%), Query Frame = 2

Query:  287 LEELSTTVSKLTFNIFGSESEKKVGSFLFNEKTEWATSRELHGLAALTFNEKECAGVMAVIGKALNPKDSTWRTLNKAVRLLRHFVLYGAERCVDHAWDHQRRIEELRRYNSAMHGRTSTLNGGGTDFGGPVREAAAELDDLLKDSDAIREAREEGRTPDALLPMGAPDDYRAPVKAK---GIDLGIDDAFGIVPQGSMGAKFDLKQVPGLYEGRPDRYFDDKADPRKRSQGVEDSDHTRQAQAVDLLDLDIGGETT 1048
            +E +  TV+K  F + G+E+E+K+G+FLF+E  +WATSRELHGLAA TFN+ ECA V A++  +++PK++TWRT+ KAVRL+ H V YGAERCVDHAWD QR+++EL RYNSA+H RT  L GGG D+G PVREAA E+  LLKD+D IR  R E R   ALLP+GA DDY AP +            D FG+V   ++GAKFDL  VPG+Y GRP RYFD+ AD R  ++ VEDS  TRQ  A DLLDLD+  + T
Sbjct:    1 MEAVQATVNKFAFKLLGTETERKLGAFLFDENVDWATSRELHGLAAYTFNDYECAVVYAMLTASMDPKNNTWRTILKAVRLVNHCVTYGAERCVDHAWDAQRQLDELTRYNSAVHSRTGALAGGGVDYGAPVREAAKEVLVLLKDTDRIRRQRAEARDTGALLPLGATDDYAAPQQTLDPLAAARRTSDTFGVVQTDALGAKFDLNSVPGMYNGRPARYFDNTADRRNHNR-VEDSQRTRQYFAQDLLDLDLPTDDT 256

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BLAST of mRNA_E-siliculosus-1a_M_contig83.16501.1 vs. uniprot
Match: A0A7S2S6F2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S6F2_9STRA)

HSP 1 Score: 215 bits (548), Expect = 2.030e-62
Identity = 132/271 (48.71%), Postives = 177/271 (65.31%), Query Frame = 2

Query:  341 ESEKKVGSFLFNEKTEWATSRELHGLAALTFNEKECAGVMAVIGKALNPKDSTWRTLNKAVRLLRHFVLYGAERCVDHAWDHQRRIEELRRYNSAMHGRTSTLNGGGTDFGGPVREAAAELDDLLKDSDAIREAREEGRTPDALL--PMGAPDDYRAPVKAKGIDLGIDD-AFGIVPQGSMGAKFDLKQVPGLYEGRPDRYFDDKADPRKRSQGVEDSDHTRQAQAVDLLDLDIGGETTHTTSVPEAQDLVRAGKEAALAEQLKAQQQQLE 1144
            E+EKKV + L N+K + A+S++LH +AAL+FNE E   +  V+  AL+ + ++W+TL KAV LL H V +GAERCVD AWD  R +E L +YNSAM         GG DFG PVR+ A  L  LLKD +AIR AR   +T +  +  P+GA +DY AP +   +  G D  AFG     ++ A++ ++Q PG+YEGRP+RYFD++ DPR+R  GVEDS  TR A A DLLDLD G  +  +T V E QDL ++  E  + EQL+AQQQQLE
Sbjct:   28 ETEKKVMTLLHNDKAQSASSKDLHAMAALSFNEGEAGHLFRVLRAALDSQQNSWQTLVKAVLLLDHLVRFGAERCVDFAWDMLRVVEGLAQYNSAMVKTALGTPRGGRDFGEPVRDQAGRLLALLKDDEAIRTARRSIQTENQGIAPPIGA-EDYTAPTQEPTVKAGRDSRAFGSQAGIALSAQYSIEQTPGMYEGRPERYFDNQDDPRRRIGGVEDSHITRNALAGDLLDLDFGTASGPST-VLETQDLAQSLHEKKMQEQLEAQQQQLE 296

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BLAST of mRNA_E-siliculosus-1a_M_contig83.16501.1 vs. uniprot
Match: A0A7S1TSE1_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSE1_9STRA)

HSP 1 Score: 211 bits (536), Expect = 1.090e-60
Identity = 125/273 (45.79%), Postives = 168/273 (61.54%), Query Frame = 2

Query:  287 LEELSTTVSKLTFNIFGSESEKKVGSFLFNEKTEWATSRELHGLAALTFNEKECAGVMAVIGKALNPKDSTWRTLNKAVRLLRHFVLYGAERCVDHAWDHQRRIEELRRYNSAMHGRTSTLNGGGTDFGGPVREAAAELDDLLKDSDAIREAREEGRTPDALLPMGAPDDYRAPVKAKGIDLGIDDAFGIVPQGSMGAKFDLKQVPGLYEGRPDRYFDDKADPRKRSQGVEDSDHTRQAQAVDLLDLDIGGETTHTTSVPEAQDLVRAGKEAA 1105
            L+ + T   +    + GSE++K+VG  LF++K + A+SREL+G+AALTFN  +C  +M ++  AL+ + STW+T  KA+ L+   V++G+E  VD   + +R +++L  YNSA   +   + GGG D GGPVRE A +L  LL  +D IRE R   R P+ L+PMG  D  R    +     G D+AFG V   S+GAKFDL  VPGLYEGRPDRYF++  DPR R   VEDS HTR A A DLLDLD     T T +   A D + A KE A
Sbjct:   19 LDAMGTMSQRYRLYMSGSETQKRVGVLLFDDKEDGASSRELNGVAALTFNADQCDEIMDMLVVALDSEQSTWKTHLKALMLMNTIVVHGSEPGVDGVINLEREVQKLEVYNSATASKLHGMRGGGIDEGGPVRETAKKLASLLSSTDRIREVRRNARDPNTLVPMGEHDYERKAPSSSAAGPGDDNAFGQVRTDSLGAKFDLSAVPGLYEGRPDRYFENPEDPRARGT-VEDSSHTRNALAGDLLDLDFA--PTATANALPAADFLPAQKENA 288

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BLAST of mRNA_E-siliculosus-1a_M_contig83.16501.1 vs. uniprot
Match: A0A7R9UA05_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UA05_9STRA)

HSP 1 Score: 199 bits (507), Expect = 3.260e-55
Identity = 117/279 (41.94%), Postives = 172/279 (61.65%), Query Frame = 2

Query:  284 ALEELSTTVSKLTFNIFGSESEKKVGSFLFNEKTEWATSRELHGLAALTFNEKECAGVMAVIGKALNPKDSTWRTLNKAVRLLRHFVLYGAERCVDHAWDHQRRIEELRRYNSAMHGRTSTLNGGGTDFGGPVREAAAELDDLLKDSDAIREAREEGRTPDALLPMGAPDDYRAPVKAKGIDLGIDDAFGIVPQGSMGAKFDLKQVPGLYEGRPDRYFDDKADPRKRSQGVEDSDHTRQAQAVDLLDLDIGGETTHTTSVPEAQDLVRAGKEAALAEQL 1120
            +LE + T   +    + GSE++++V SFLF+++ E  +SR+L+G+AALTFN ++C  V+ ++  AL+P+ S+WRT+ K + L++  + +G+E  V+   +  R++  L+ YNSA+     TL GGG D G PVRE A E+  L +D + IRE R + R   A++P+G  D Y  PV+  GI +   D FG V    +GAKF L+Q PGLYEGRPDR+F++ AD R +   VEDS HTR A A DLLDLD         ++P A  L    +  AL +QL
Sbjct:   19 SLEAMGTMGQRFQLYMSGSETQRRVASFLFDDRDESVSSRDLNGVAALTFNAEQCKEVVDMMHVALDPQMSSWRTVKKGLMLVKTVMTHGSELAVNQLLELDRKVFPLQDYNSALASNFHTLKGGGVDAGRPVRELAREIAPLFQDMNKIRELRTQSRDERAMVPLGERD-YTRPVEDPGI-VPSTDTFGEVSANPLGAKFTLEQTPGLYEGRPDRFFENPADTRAQRGAVEDSQHTRDALAEDLLDLDFAPGQQAGATLPGADFLPAQQQNEALQKQL 295

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BLAST of mRNA_E-siliculosus-1a_M_contig83.16501.1 vs. uniprot
Match: A0A482RUL1_9ARCH (ENTH domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RUL1_9ARCH)

HSP 1 Score: 147 bits (370), Expect = 5.430e-38
Identity = 87/227 (38.33%), Postives = 130/227 (57.27%), Query Frame = 2

Query:  287 LEELSTTVSKLTFNIFGSESEKKVGSFLFNEKTEWATSRELHGLAALTFNEKECAGVMAVIGKALNPKDSTWRTLNKAVRLLRHFVLYGAERCVDHAWDHQRRIEELRRYNSAMHGRTSTLNGGGTDFGGPVREAAAELDDLLKDSDAIREAREEGRTPDALLPMGAPDDYRAPVKAKGIDLGIDDAFGIVPQGSMGAKFDLKQVPGLYEGRPDRYFDDKADPRKRS 967
            + +L +  +KLT    GSE  K     LF ++      + L+ LAALT+N K C  + A + KA+ P ++ W+T+ KA+ LL   +LYG+E  +D A    + +  L+ YNSA+  + S  + GGTD+G PVR  AA +  +L   + IR AR E RT D L+P+G   +   P +      G+   +G     S+GA F L+ VPG+YEGRPDRYFD+++D R R+
Sbjct:    1 MSDLKSYFAKLTSGAQGSEEGKACALILFTDQDIQMNDQRLNNLAALTYNSKSCENIFAELEKAITPTENPWKTIYKALLLLHTIILYGSELAIDKAISLCKFVHPLQAYNSALV-KKSFFSSGGTDYGAPVRATAAVITTILMKDENIRRARSEARTAD-LVPLGQAFEQHNPQQ------GLQMTYGQGLNSSVGAGFGLEAVPGMYEGRPDRYFDNESDIRNRN 219

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BLAST of mRNA_E-siliculosus-1a_M_contig83.16501.1 vs. uniprot
Match: A0A7S1B9W0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B9W0_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.010e-23
Identity = 93/267 (34.83%), Postives = 141/267 (52.81%), Query Frame = 2

Query:  404 ELHGLAALTFNEKECA-GVMAVIGKALNPKDSTWRTLNKAVRLLRHFVLYGAERCVDHAWDHQRRIEELRRYNSAM-HGRTSTLNGGGTDFGGPVREAAAELDDLLKDSDAIREAREEGRTPDALLPMGAPDDYRAPVK------AKGIDLGIDDAFGIVPQGSMGAKFDLKQVPGLYE---GRPDRYFDD--KADPRKRSQGVE------DSDHTRQAQAVDLLDLDIGGETTHTTSVPEA-QDLVRAGKEAALAEQLKAQQQQLE 1144
            ELH LAALT+N  E     + + G   NP++ T  ++ +A+ L++H V+YG E+ VD+AW+    IE+L  YN+A+  G    + GGG D G  +R+ AAEL ++L+DSD IR  R +   P++L+P+    D   P K      A     G    FG      +GAK  L+++  L E     P ++FDD  K +   R + +E      DS +TRQ  A DLLDL    +   + + P+A +DL    +E  L +Q+   Q QL+
Sbjct:   66 ELHRLAALTYNHSENKRAFLKIRGVIENPENQTPASILRALILIKHLVIYGCEQSVDNAWELGPFIEKLTAYNTALGRGIIHKIQGGGVDKGFSMRQFAAELVNILRDSDKIRNLRRQNADPNSLVPVL---DIPKPAKMCQAQPALAFGGGYSSEFGKKETTVVGAKHSLEEMIKLAEKEKAAPVKFFDDREKEEDELRRKNMEPPQRSLDSAYTRQILAPDLLDLSYEKDMVQSHNFPKAVEDLAAKKREDELQKQIVELQLQLD 329

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BLAST of mRNA_E-siliculosus-1a_M_contig83.16501.1 vs. uniprot
Match: A0A448ZKR3_9STRA (ENTH domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZKR3_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.710e-17
Identity = 56/155 (36.13%), Postives = 91/155 (58.71%), Query Frame = 2

Query:  347 EKKVGSFLFNEKTEWATSRELHGLAALTFNEKECAGVMAVI-GKALNPKDSTWRTLNKAVRLLRHFVLYGAERCVDHAWDHQRRIEELRRYNSAM--------HGRTSTLNGGGTDFGGPVREAAAELDDLLKDSDAIREAREEGRTPDALLPMG 784
            EK++   LF+E  +  ++ EL+ +A+LT+N+  C G+  +I G   +P D T  T+ KA+ + +H V+YG+E  V+HA+  Q  +  L+ +N+ +         G    L GGG D GGPVREAA E+  LL + D +R+ R    + D+L+P+G
Sbjct:   15 EKQLRPILFDESIQVLSNFELNQVASLTYNDLTCDGIFELIEGICNSPLDHTCLTIQKALIVTKHVVVYGSENTVNHAYAIQHLVHPLQEFNTVLMAHKKGGPRGFFQNLQGGGVDRGGPVREAAVEVVKLLSNIDELRKIRVASASQDSLVPVG 169

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BLAST of mRNA_E-siliculosus-1a_M_contig83.16501.1 vs. uniprot
Match: A0A1E7F3A1_9STRA (ENTH domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F3A1_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 4.150e-13
Identity = 49/155 (31.61%), Postives = 90/155 (58.06%), Query Frame = 2

Query:  347 EKKVGSFLFNEKTEWATSRELHGLAALTFNEKECAGVMAVIGKALN-PKDSTWRTLNKAVRLLRHFVLYGAERCVDHAWDHQRRIEELRRYNSAMHGRTS--------TLNGGGTDFGGPVREAAAELDDLLKDSDAIREAREEGRTPDALLPMG 784
            EK++   LF+E  +  ++ EL+ +A+LT+N+    G+  +IG+  + P D T  T+ K++   +H ++YG+E+ V+HA+     I+ L  +N+ +  +          +L GGG D GGP+R+AA E+  LL + + +R  R    + D+L+P+G
Sbjct:   27 EKQLRPILFDEGIQVLSNFELNQVASLTYNDMTLDGIFELIGRVCSRPVDHTPLTIQKSLVTTKHVLIYGSEKTVNHAYGILDYIKALLEFNTILMTQKQGGAMSFFQSLQGGGVDKGGPIRDAAGEVVRLLSNINELRRIRTASASQDSLVPVG 181

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BLAST of mRNA_E-siliculosus-1a_M_contig83.16501.1 vs. uniprot
Match: B7FYF4_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FYF4_PHATC)

HSP 1 Score: 75.1 bits (183), Expect = 6.130e-11
Identity = 49/166 (29.52%), Postives = 91/166 (54.82%), Query Frame = 2

Query:  338 SESEKKVGSFLFNEKTEWATSRELHGLAALTFNEKECAG--------VMAVIGKALN-PKDSTWRTLNKAVRLLRHFVLYGAERCVDHAWDHQRRIEELRRYNSAMHGRTST--------LNGGGTDFGGPVREAAAELDDLLKDSDAIREAREEGRTPDALLPMG 784
            SE+ +K+ + L++E  +  TS EL+ LA+LT++E   AG        +   +G+ L+ P   T   L+KA+ ++ H +++GAE+ +  A    + ++ L+ YN+ +  +           + GGG D GGPVREA+ ++  LL +   +   R+    P++L+P+G
Sbjct:   16 SETIQKLNNLLYDESVQTITSFELNQLASLTYHESSLAGADDDLAEAIYEALGRVLSQPASQTPLALHKALAVVHHVLIFGAEKSLAEAIFLGKHVDFLQSYNTVLLAQQQAGAAGIFMRIKGGGVDKGGPVREASQKVLRLLTNRQVLTRERQAQADPNSLVPIG 181

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig83.16501.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig83.16501.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 10


Match Name	E-value	Identity	Description
D7FZF7_ECTSI	1.660e-152	82.29	ENTH domain-containing protein n=1 Tax=Ectocarpus ...	[more]
A0A835YVG9_9STRA	5.210e-83	56.03	ENTH domain-containing protein n=1 Tax=Tribonema m...	[more]
A0A7S2S6F2_9STRA	2.030e-62	48.71	Hypothetical protein (Fragment) n=1 Tax=Rhizochrom...	[more]
A0A7S1TSE1_9STRA	1.090e-60	45.79	Hypothetical protein (Fragment) n=2 Tax=Phaeomonas...	[more]
A0A7R9UA05_9STRA	3.260e-55	41.94	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
A0A482RUL1_9ARCH	5.430e-38	38.33	ENTH domain-containing protein n=1 Tax=archaeon Ta...	[more]
A0A7S1B9W0_9STRA	1.010e-23	34.83	Hypothetical protein n=1 Tax=Corethron hystrix Tax...	[more]
A0A448ZKR3_9STRA	1.710e-17	36.13	ENTH domain-containing protein n=1 Tax=Pseudo-nitz...	[more]
A0A1E7F3A1_9STRA	4.150e-13	31.61	ENTH domain-containing protein n=1 Tax=Fragilariop...	[more]
B7FYF4_PHATC	6.130e-11	29.52	Predicted protein n=1 Tax=Phaeodactylum tricornutu...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig83	contig	E-siliculosus-1a_M_contig83:586215..592054 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Properties


Property Name	Value
Start	1
Stop	0
Cds size	963
Model size	1244
Exons	8
Hectar predicted targeting category	other localisation
Best eggNOG OG	NA\|NA\|NA
Best tax level	Bacillariophyta
Ec32 ortholog	Ec-19_003140.1
Ec32 ortholog description	ENTH/VHS
EggNOG OGs	2EPWQ@1,2ST0U@2759,2XDR7@2836
Seed eggNOG ortholog	2850.Phatr45658
Seed ortholog evalue	3.5e-12
Seed ortholog score	79.3
Taxonomic scope	Eukaryota

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622936277.7746804-UTR-E-siliculosus-1a_M_contig83:586214..586494	1622936277.7746804-UTR-E-siliculosus-1a_M_contig83:586214..586494	Ectocarpus siliculosus Ec864m_EcPH12_78m male	UTR	E-siliculosus-1a_M_contig83 586215..586494 +
1696251004.9366612-UTR-E-siliculosus-1a_M_contig83:586214..586494	1696251004.9366612-UTR-E-siliculosus-1a_M_contig83:586214..586494	Ectocarpus siliculosus Ec864m_EcPH12_78m male	UTR	E-siliculosus-1a_M_contig83 586215..586494 +

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig83.16501.1	prot_E-siliculosus-1a_M_contig83.16501.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	polypeptide	E-siliculosus-1a_M_contig83 586495..592054 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_M_contig83:586215..592054+
coding sequence from alignment at E-siliculosus-1a_M_contig83:586215..592054+

protein sequence of mRNA_E-siliculosus-1a_M_contig83.16501.1

>prot_E-siliculosus-1a_M_contig83.16501.1 ID=prot_E-siliculosus-1a_M_contig83.16501.1|Name=mRNA_E-siliculosus-1a_M_contig83.16501.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=321bp
MALEELSTTVSKLTFNIFGSESEKKVGSFLFNEKTEWATSRELHGLAALT
FNEKECAGVMAVIGKALNPKDSTWRTLNKAVRLLRHFVLYGAERCVDHAW
DHQRRIEELRRYNSAMHGRTSTLNGGGTDFGGPVREAAAELDDLLKDSDA
IREAREEGRTPDALLPMGAPDDYRAPVKAKGIDLGIDDAFGIVPQGSMGA
KFDLKQVPGLYEGRPDRYFDDKADPRKRSQGVEDSDHTRQAQAVDLLDLD
IGGETTHTTSVPEAQDLVRAGKEAALAEQLKAQQQQLEQLRILMLSKGQQ
GGGGGGGGGAGLVGGIGGVAA

mRNA from alignment at E-siliculosus-1a_M_contig83:586215..592054+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_M_contig83.16501.1 ID=mRNA_E-siliculosus-1a_M_contig83.16501.1|Name=mRNA_E-siliculosus-1a_M_contig83.16501.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5840bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig83:586215..592054+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
GAACCAGCAGTGGAACCCGCCGCGTGCAACGAAGAGTGAAACAGCAGTCA
GGACAGGGAGAGAGACCACAAATACAGCGCGCCCACGACAGCAAAGTCAT
AGGCTTGTATTGTGCACGCGGTGTGCACGCTGCATCGCACGCTCGTCCTG
GGGCATCGGCGTCTAGCGGGAGATTAAATTCTGTCCGAAGCCGAACATAT
TTTTATTGTCTCCGCTCTGTCTACCGAAGCAGGGCTAACAACTCGTAAAC
TACGGGTAAACAACAGCAACAACAACAACAATGGCGCTTGAGGAGCTGTC
CACCACCGTGAGCAAGCTGACGTTCAACATCTTTGGCTCCGAGTCCGAAA
AGAAGGTGTGTTGTGGGCGGAACAAGGGGGATTGGAGAAGTGACCCAGCG
GCGAAGCACTCAACTGGTTGAACAACAAGAGCTACGCGTGAAGACGTACG
CGTATTATAGTGTACAGCAGTACCGCAGCGTCCAGAGCCGATTATGCGGC
TGCACTACACTACAACGGGGGGATTCACCAGCAGCCAGCCCTCCCCCCGT
GCCTACAGTCTAGCCGCACGTAGCTCGGTGTTGTTCGTGAATGGATACCC
GAAATCATATCTGCAGAGAGCATTCTGATGTCCGCCCTCTTTCCCCCTCC
CAGACTTTTTGCATAGTTTTGCCGAAACATCAACATGTCGGAAACCGCGT
TGTTCGGCATCGACCCTCTGCCTCCATGCGGAGATAGATGTGTCGACGTG
GGAATCTCCGTTCGGCCGCGAGGCGCCGTGTGTACTCGAAGGGGGTACCT
CCTACGAGTGCAGGCAAAGACTGCTACGCACGACGAGCCACCAGACAATA
GACAACACACATACGAATGATGGCATAAACCTATCGGGCTGCGGGGTAAT
CAAGGATCAACCCTACAACTGACGTCGTCTACAGCAGTATTTCCCGCGAC
TACAATGCACACGGAGACGGGGGATGCGTACCTGCTGTACTGCTGTACGA
ACCCAGGAACTTGCCAGGAACCGAGAGAGTGCTTGCAGTCTCTTCGCCCC
GCCAACAGTAGCAGCAGGACGTTAAGGCGTGCTGTACATGCTACCAATAC
CTGTATTTGTAGTACAGATTCATGACCACGACAGTGTTGTTGCGCTCGTG
GCGCCCTTTGGCGTGAAACTGGGCTGTCTTGAAGCCATCCTCGTCTTGAT
TTAGCGACTTCGATACTTGTTGCTAGAAAATGGAAACTTCACTCACCCGT
TCCAGGCCAACATCCCAATCGACCGGGATATGTTGTTGTTGTCGTTGCTT
TGAGGATACACGCATGCGATCTCTCAAAGATATGACGGTACTCGGTCGGC
ATAATATATTCTTCGAAGTGCCCCAGGCGACGGTATTCTATGTGTTGAAG
TCTTTCCAGCAGTGAATGGGGGAACAGAAGCCTGCTGTTTTGTGTTTGGC
AGCTGCTTGAATTCAATACCTCAATGTTGCTGTACGGCCATCCGCCCGCC
GCCATCGGCCAGGTCGGCAGCTTCCTGTTCAACGAGAAGACCGAGTGGGC
GACTTCGCGGGAGCTGCACGGCCTCGCCGCCTTGACCTTCAACGAAAAGG
AGTGCGCCGGCGTGATGGCCGTGATCGGGAAGGCCCTCAACCCCAAGGAC
AGCACCTGGCGCACCTTGAACAAGGTGAGAAGGGGGGGGGCGTACTCATT
TGTTGAGTACGGTGAGAAGGGGGGGGGGTGTAGAAGAACGCAATGCCGAA
GTCGTTAGACCATTTGAGCTCGCATCGCCGGGAAGGAGGGGCGATAGGCC
GGCCCAGGTTACGTTTCGCAAGGATAAAGCATACGCTGGCCATCATTCTT
GGCGAGAAAGGAGCCGGTATTGGTTGTGGCAACAGCAGTAGTGATCCTAT
AAATTCATCGTTATTAGTGTACCCTGGTCTGCGCCTGTGGTACTGGAAAT
ATATATATTTTTGTTCTTACAATGGCACAACGAACCCATTTTCTTTGTTA
CGGGATTATAGCTCGTTTTGTTTCCGTAACAAGAGAAAAGAAAGAGTTTG
GTTTTTTCATGTCGGGTCAACGTTCTCTTGGACGAGGTACAGTGCAGTGT
TGCAATAATGGGTTGCGTTTTGGCGGCGTTATTTCATTCGCTGTCGCTCG
CTGCCTGTCGCTGTGTCGCCGGCTGGGATGCCACTGCCATCGATTGTTAC
TGCTGTTGAGGCCCTTCTGATGATGATGATGATGATGATGCCCTCTGCTG
CCCACTGTCGTTGCCCCTGATCGATCGCTCTTGGACAAGGCGGTCAGACT
TCTCCGCCACTTCGTCCTGTACGGTGCGGAGAGATGTGTGGACCACGCCT
GGGATCATCAGCGACGGGTGAGGGATGCCACACACTGTCGTGTTTTGTTG
TGTGTGGTTCCTTGGGCAGAGGGGGGGAGGCGTACTCATGTTTTGCGTGC
CTTAGTTGTTAGGCCATTGACCACCCGTCCTCGAGAGGATGGGTAATTGT
TCCCGCAGGACCGATCACCGATGGCCAATCGGTCCTTCCTACCCTTCGCC
AAACTCTCCTTGGGGAGAGGGGGTGGAAGAACAACGTTGATGCACATTGA
TGTATTTTTCAGGCAGAACCTGTGTTCAATTATAAGTAAAACGGAATCCC
GTCCTATCAAGTCGTATTGCAGTAGTGTCAAAGCGGATCTACCGAGGAGG
TAAGGTCGGGGTCTACGGCTGTAGCGTTTGGATCATCAAGGCGGGGGGAG
ACTCATTTATTGTTTGCCTGTTCTCTCTTGACCGTTGACCCCGCCCCTCC
CCCATGAGGGAAACGGTCGGGAGAGGGGGCTACGGCGTGTAAAGAACTTC
TTGCGAATTGTATTAGAGTCTCCGATCGTTATTTAGGGAAATGCCCCTGG
CGAAGATCGTCTCACAAATTGGAGCGTTCGAGCGTTACAAGTGGGAAACG
ATGCAGACCCATGATCCTAGCGACTGGAGAGCAATAGGAAGCAAAACCAG
CACCCCTCCCACCCATCGCCACTGCGTACCCGTGTTTGTCCCGCCCCCAA
CGATCCTCCCGCTGGAACAGATAGAAGAGTTAAGACGATACAACTCCGCC
ATGCACGGGCGCACCTCGACGTTGAACGGAGGCGGCACGGACTTCGGGGG
TCCCGTGCGAGAGGCCGCCGCGGAGGTAAGGGGGGGATGTGCTCTATTAA
TAGTTGCTTTTGGCCGTTTTTTGAAGTTCTTTTTGTTCGTTTTTTGTTTT
TTGTTGGCCGTGCTACTTCTTGCTGTGGTCGAACGTCAGCAAAATTGCGT
TGCCGTCAGCTCAGCCAAATCGCCTTGTCATGCTCTTGCTGTTTGTGGCG
TGGCTGTTGTGTTTCGTCGATGGTTGGGGGTGTGTGCAGCATTCTATTAC
CACGTAGAGCTCCAAAGCTACCTCGCCGGTGACCGCCCCCCCTCCGAAAC
ACGTATCCCCCCCCGGGGATTTGAGAGGACTGAAACGACTCGGTGAGCGG
CGAATCACGAAGGGTATCGCACATGGTGAACGCTGGTGCCCTCCTACCGC
TCCCTGTATCTCCACCCCGCGCACTCCCTATGCCCCTATCACCCGGCCGC
CTTCATAGCTGGACGACTTGCTGAAAGATTCGGACGCGATCCGAGAAGCG
AGGGAGGAGGGGAGGACGCCGGACGCGCTGCTGCCGATGGGCGCCCCGGA
TGACTACAGGGCTCCCGTGAAGGCCAAAGGGATAGACCTCGGCATTGTGA
GTAGTACGCCTACCGTAGGGTGATGCCACACCCCTCGGACCGATCTCGAT
TACTCCACAGCGCAGAGAGTGGCGGTACCGGCGCGTCTCGTGGAGAGCTT
TTCCGGTAACGTATTTGTACATCCCCTTCGTGGTGGAGTGGTTTTGACCT
TTGAAAGTTGGTCCAAAGGGGTGTGCTATCTTAGGTCGATATTTTGGCGG
GCCAACGCCGCGCTCCCACGCTCTCTTCATTGTAGCTGATGCATGCAGCG
GTCGGGCATCGTATGTTGATACGTGTTGCCGCCCGGCCGCAGCGCATTTA
TCTTTGTTGTCGTGGTAGTCGCTTGCTTTTGTCGTTGCCTTCGTTGGTGC
TGGTTCTGGTTCTGGTTCTGGTTCTGGTGCTGCTGTTGCTGGTGCTGTCG
TTGGGGGTCGATCGCCGGGGTGTGTCGGGTGTTCTAGGTGTTACCGTGAT
TTTGATTTTCCTTCAACCCCCTCCCACAAACCCACTGCTGTCCTGCCGGC
CCATCCATACAATACATCCCAAACGTTGCCGGTCTATTGACAGCAAAGCT
TCCAATATGAATCAATTCTTCTAGCCTCCAGATAAAAACAAAACACAATA
AAACGGAGCTCCTGCGCAACTCATTCCGACCGCCTGCTTCCAACCATCAT
TTCCAGCGGTGGGTTCCCCGCCCTCTTCACGGTTGGTCATCCTTTTGCCC
TTTGAACCACGAAACCGATGCAGGACGATGCTTTCGGAATTGTCCCGCAA
GGCTCTATGGGTGCCAAGTTCGACCTGAAGCAGGTCCCGGGTCTGTACGA
GGGCAGACCTGACCGCTACTTCGATGACAAGGCCGACCCCAGAAAGAGAA
GCCAGGGGGTGGAAGACAGCGACCACACCAGACAGGTGTGTGTGTGTGTG
TGTGTGTGTGTGCTTGTGTGTGTGGTTTGAGCGTTGGTGTCGACCGTGCT
ACCCGGTGACAATACGTCTGTTCTGACCCGCTTCTCTGTTCTTTTCACCC
CTTTTGCCACCCCTCGCCGGCGGCCTCCGTTCTCTTTCTGCCGTCACCGT
CACACCCGCCCGATGGCATGGCATGGCGTGGCATCCAGGCCCAGGCTGTG
GACCTACTAGACCTAGACATCGGAGGAGAGACCACGCACACGACCAGCGT
GCCGGAGGCCCAAGACCTAGTTGTGAGTTGGCTAGGTTTTTAGAGTCAAG
TCGAGTTGAGAATTCTTGTTGGCAGCCGCATGTAGAAAGAGTTCTGAGGT
TGTTACATAGCACACAGCAGAAGGAGCGATCCGGCGTGGATCCATGTGTA
CGTACGTACACGTGTCGCCCGCTGGCAAGCCGCGGTACGCGAAAGGAGCG
AATCCGGTTGAGATTTTTTCCTGGGAGCCCGATGTAGACAGACGAATGCA
CACCTTGAGTGAGGTTGTTGTTGTTGCACACAGCAGTTCTGTTTGAGAGT
TTCAAGCCCAACCAGTGTTCCAGCTCTCCCTGTTGCCTAACGGCATACAT
GAGAACGCAGGCTTGTTTCGTCCTGTGCTCCTGCGATTCGTCCCCGCACC
TTGTGTGCCTTGGTTCTGAAGCCGTCTCGTCGTCTTTGGGGGTGAGCCCG
GGCTTGAGAGTGGTTAGTCGAACCCCCCCGCCCCTCGTCTCGCTTGCTCC
TTCCCTCATTTCGCTTGATGGTTTCAAGCGCCGTCTGTGCCAGCCGCCAT
GCCTGGCTTTTCGTTACGCCATTGGCGTTCGTTTGGTTTTTCCACTGCCG
CTATACCCCCTCCCTTTTTTCTCCACTTTGCAAAGTTTGCTACACATGTA
GACTATCTTGTCCATTTTCCACCTTCTTATCGTGCGTGACTGTCGATCTT
TTCCGTATCCCGTATGCCTTTTTTTTTTCCCGTGGGTTTTTCCCGTCGTC
CCGCCAACGCCCCCCGGGGCCGCGCTCGCAGCGCGCCGGAAAAGAGGCCG
CGCTCGCGGAACAGCTCAAAGCGCAGCAGCAGCAGCTCGAGCAGCTCCGG
ATCCTTATGCTCAGCAAGGGACAGCAGGGTGGCGGCGGCGGTGGCGGCGG
TGGTGCAGGGCTTGTTGGGGGTATCGGCGGAGTGGCAGCA

Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig83:586215..592054+

>mRNA_E-siliculosus-1a_M_contig83.16501.1 ID=mRNA_E-siliculosus-1a_M_contig83.16501.1|Name=mRNA_E-siliculosus-1a_M_contig83.16501.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1926bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig83:586215..592054+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGCGCTTGAGGAGCTGTCCACCACCGTGAGCAAGCTGACGTTCAACAT
CTTTGGCTCCGAGTCCGAAAAGAAGATGGCGCTTGAGGAGCTGTCCACCA
CCGTGAGCAAGCTGACGTTCAACATCTTTGGCTCCGAGTCCGAAAAGAAG
GTCGGCAGCTTCCTGTTCAACGAGAAGACCGAGTGGGCGACTTCGCGGGA
GCTGCACGGCCTCGCCGCCTTGACCTTCAACGAAAAGGAGTGCGCCGGCG
TGATGGCCGTGATCGGGAAGGCCCTCAACCCCAAGGACAGCACCTGGCGC
ACCTTGAACAAGGTCGGCAGCTTCCTGTTCAACGAGAAGACCGAGTGGGC
GACTTCGCGGGAGCTGCACGGCCTCGCCGCCTTGACCTTCAACGAAAAGG
AGTGCGCCGGCGTGATGGCCGTGATCGGGAAGGCCCTCAACCCCAAGGAC
AGCACCTGGCGCACCTTGAACAAGGCGGTCAGACTTCTCCGCCACTTCGT
CCTGTACGGTGCGGAGAGATGTGTGGACCACGCCTGGGATCATCAGCGAC
GGGCGGTCAGACTTCTCCGCCACTTCGTCCTGTACGGTGCGGAGAGATGT
GTGGACCACGCCTGGGATCATCAGCGACGGATAGAAGAGTTAAGACGATA
CAACTCCGCCATGCACGGGCGCACCTCGACGTTGAACGGAGGCGGCACGG
ACTTCGGGGGTCCCGTGCGAGAGGCCGCCGCGGAGATAGAAGAGTTAAGA
CGATACAACTCCGCCATGCACGGGCGCACCTCGACGTTGAACGGAGGCGG
CACGGACTTCGGGGGTCCCGTGCGAGAGGCCGCCGCGGAGCTGGACGACT
TGCTGAAAGATTCGGACGCGATCCGAGAAGCGAGGGAGGAGGGGAGGACG
CCGGACGCGCTGCTGCCGATGGGCGCCCCGGATGACTACAGGGCTCCCGT
GAAGGCCAAAGGGATAGACCTCGGCATTCTGGACGACTTGCTGAAAGATT
CGGACGCGATCCGAGAAGCGAGGGAGGAGGGGAGGACGCCGGACGCGCTG
CTGCCGATGGGCGCCCCGGATGACTACAGGGCTCCCGTGAAGGCCAAAGG
GATAGACCTCGGCATTGACGATGCTTTCGGAATTGTCCCGCAAGGCTCTA
TGGGTGCCAAGTTCGACCTGAAGCAGGTCCCGGGTCTGTACGAGGGCAGA
CCTGACCGCTACTTCGATGACAAGGCCGACCCCAGAAAGAGAAGCCAGGG
GGTGGAAGACAGCGACCACACCAGACAGGACGATGCTTTCGGAATTGTCC
CGCAAGGCTCTATGGGTGCCAAGTTCGACCTGAAGCAGGTCCCGGGTCTG
TACGAGGGCAGACCTGACCGCTACTTCGATGACAAGGCCGACCCCAGAAA
GAGAAGCCAGGGGGTGGAAGACAGCGACCACACCAGACAGGCCCAGGCTG
TGGACCTACTAGACCTAGACATCGGAGGAGAGACCACGCACACGACCAGC
GTGCCGGAGGCCCAAGACCTAGTTGCCCAGGCTGTGGACCTACTAGACCT
AGACATCGGAGGAGAGACCACGCACACGACCAGCGTGCCGGAGGCCCAAG
ACCTAGTTCGCGCCGGAAAAGAGGCCGCGCTCGCGGAACAGCTCAAAGCG
CAGCAGCAGCAGCTCGAGCAGCTCCGGATCCTTATGCTCAGCAAGGGACA
GCAGGGTGGCGGCGGCGGTGGCGGCGGTGGTGCAGGGCTTGTTGGGGGTA
TCGGCGGAGTGGCAGCACGCGCCGGAAAAGAGGCCGCGCTCGCGGAACAG
CTCAAAGCGCAGCAGCAGCAGCTCGAGCAGCTCCGGATCCTTATGCTCAG
CAAGGGACAGCAGGGTGGCGGCGGCGGTGGCGGCGGTGGTGCAGGGCTTG
TTGGGGGTATCGGCGGAGTGGCAGCA