mRNA_E-siliculosus-1a_M_contig83.16483.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig83.16483.1 vs. uniprot
Match: D7FT48_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT48_ECTSI) HSP 1 Score: 576 bits (1485), Expect = 2.430e-202 Identity = 413/462 (89.39%), Postives = 416/462 (90.04%), Query Frame = 1
Query: 1 MMHNAIAKCGVLKKKSGMLRRKESRRFYVLTNTGGFFFAKGFAAEFDSLKPLLTLTGSSEVSLERGGSADSGYVMRITTRGNKPPPLELEA--EPETVAWSQVVHDVIELVRTINGDQYAAQPRPLGGLRVGDEGWYLEPTGRMALYTLNSHRRWAVQDRREYDEPTVLNWISGDRVSRTSSSGSNSARLGYPSQSGAAATGSSSADQHGSGSPDYPVNSGRGSPDPAPPAHXXDYXXXXXXXXXXXXXXXXXMSHLGXXXXXXXXXXXXXXXXHAPPA--GPNSSFAHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSADAILVGPLPVLPSVFVVGKGEGNSFGDEADSLVLRRPSTSCSANGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSHGRLGRVGRWRGGGRGTGA--AALERRQSGGDSGRRPLELSPGMEVLQSWLQRS 1368
MM+NAIAKCGVLKKKSGMLRRKESR FYVLTNTGG FFAKGFAAEFDSLKPLLTLTGSSEVSLERGGSADSGYVMRITTRGNKPPPLELEA EPETVAWSQVVHDVIELV TINGDQYAAQPRPLGGLRVGDEGWYLEPTGRMALYTLNSHRRWAVQDRREYDEPTVLNWI+GDRVSRTSSSGSNSARLGYPSQSGA+ATGSS ADQ GSGSPDYPVNS R PDPAPPAH DY MSHLGXXXXXXXXXXXXXXXX GPNSSFAHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SADAILVGPLPVLPSVFVVGKGEGNSFGDEADSLVLRRPSTSCSANGXXXXXXXXXXXXXXXXXXXXXXXXXXX NSHGRLGRVGRWRGGGRG GA AA ERRQSGGDSGRRPLELSPGMEVLQSWLQRS
Sbjct: 1 MMYNAIAKCGVLKKKSGMLRRKESR-FYVLTNTGGIFFAKGFAAEFDSLKPLLTLTGSSEVSLERGGSADSGYVMRITTRGNKPPPLELEASSEPETVAWSQVVHDVIELVGTINGDQYAAQPRPLGGLRVGDEGWYLEPTGRMALYTLNSHRRWAVQDRREYDEPTVLNWIAGDRVSRTSSSGSNSARLGYPSQSGASATGSS-ADQ-GSGSPDYPVNSXRXXPDPAPPAHPADYPSQHSHSQSMRSTSAT-MSHLGXXXXXXXXXXXXXXXXXXXXXXXGPNSSFAHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---SADAILVGPLPVLPSVFVVGKGEGNSFGDEADSLVLRRPSTSCSANGXXXXXXXXXXXXXXXXXXXXXXXXXXX---NSHGRLGRVGRWRGGGRGAGATAAAPERRQSGGDSGRRPLELSPGMEVLQSWLQRS 452
BLAST of mRNA_E-siliculosus-1a_M_contig83.16483.1 vs. uniprot
Match: A0A6H5K968_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K968_9PHAE) HSP 1 Score: 379 bits (972), Expect = 5.880e-126 Identity = 193/214 (90.19%), Postives = 197/214 (92.06%), Query Frame = 1
Query: 61 RKESRRFYVLTNTGGFFFAKGFAAEFDSLKPLLTLTGSSEVSLERGGSADSGYVMRITTRGNKPPPLELEAEPETVAWSQVVHDVIELVRTINGDQYAAQPRPLGGLRVGDEGWYLEPTGRMALYTLNSHRRWAVQDRREYDEPTVLNWISGDRVSRTSSSGSNSARLGYPSQSGAAATGSSSADQHGSGSPDYPVNSGRGSPDPAPPAHXXDY 702
R+ FYVLTNTGG FFAKGFAAEFDSLKPLL LTGSSEVSLERG SADSGYVMRITTRGNKPPPLELEAEPETVAWSQVVHDVIELV T+NGDQYAAQPRPLGGLRVGDEGWYLEPTGRMALYTLNSHRRWAVQDRREYDEPTVLNWI+GDRVSR+SS GSNSARLGYPSQSGAAA SADQ GS SPDYPVNSGRGSPDPAPPAH DY
Sbjct: 62 RRNDWPFYVLTNTGGIFFAKGFAAEFDSLKPLLMLTGSSEVSLERGVSADSGYVMRITTRGNKPPPLELEAEPETVAWSQVVHDVIELVGTVNGDQYAAQPRPLGGLRVGDEGWYLEPTGRMALYTLNSHRRWAVQDRREYDEPTVLNWIAGDRVSRSSSGGSNSARLGYPSQSGAAAATGFSADQ-GSWSPDYPVNSGRGSPDPAPPAHPADY 274 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig83.16483.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig83.16483.1 >prot_E-siliculosus-1a_M_contig83.16483.1 ID=prot_E-siliculosus-1a_M_contig83.16483.1|Name=mRNA_E-siliculosus-1a_M_contig83.16483.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=457bp MMHNAIAKCGVLKKKSGMLRRKESRRFYVLTNTGGFFFAKGFAAEFDSLKback to top mRNA from alignment at E-siliculosus-1a_M_contig83:365004..371217- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig83.16483.1 ID=mRNA_E-siliculosus-1a_M_contig83.16483.1|Name=mRNA_E-siliculosus-1a_M_contig83.16483.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=6214bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig83:365004..371217- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig83:365004..371217- >mRNA_E-siliculosus-1a_M_contig83.16483.1 ID=mRNA_E-siliculosus-1a_M_contig83.16483.1|Name=mRNA_E-siliculosus-1a_M_contig83.16483.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2742bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig83:365004..371217- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |