mRNA_E-siliculosus-1a_M_contig83.16483.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig83.16483.1
Unique NamemRNA_E-siliculosus-1a_M_contig83.16483.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig83.16483.1 vs. uniprot
Match: D7FT48_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT48_ECTSI)

HSP 1 Score: 576 bits (1485), Expect = 2.430e-202
Identity = 413/462 (89.39%), Postives = 416/462 (90.04%), Query Frame = 1
Query:    1 MMHNAIAKCGVLKKKSGMLRRKESRRFYVLTNTGGFFFAKGFAAEFDSLKPLLTLTGSSEVSLERGGSADSGYVMRITTRGNKPPPLELEA--EPETVAWSQVVHDVIELVRTINGDQYAAQPRPLGGLRVGDEGWYLEPTGRMALYTLNSHRRWAVQDRREYDEPTVLNWISGDRVSRTSSSGSNSARLGYPSQSGAAATGSSSADQHGSGSPDYPVNSGRGSPDPAPPAHXXDYXXXXXXXXXXXXXXXXXMSHLGXXXXXXXXXXXXXXXXHAPPA--GPNSSFAHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSADAILVGPLPVLPSVFVVGKGEGNSFGDEADSLVLRRPSTSCSANGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSHGRLGRVGRWRGGGRGTGA--AALERRQSGGDSGRRPLELSPGMEVLQSWLQRS 1368
            MM+NAIAKCGVLKKKSGMLRRKESR FYVLTNTGG FFAKGFAAEFDSLKPLLTLTGSSEVSLERGGSADSGYVMRITTRGNKPPPLELEA  EPETVAWSQVVHDVIELV TINGDQYAAQPRPLGGLRVGDEGWYLEPTGRMALYTLNSHRRWAVQDRREYDEPTVLNWI+GDRVSRTSSSGSNSARLGYPSQSGA+ATGSS ADQ GSGSPDYPVNS R  PDPAPPAH  DY                 MSHLGXXXXXXXXXXXXXXXX       GPNSSFAHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   SADAILVGPLPVLPSVFVVGKGEGNSFGDEADSLVLRRPSTSCSANGXXXXXXXXXXXXXXXXXXXXXXXXXXX   NSHGRLGRVGRWRGGGRG GA  AA ERRQSGGDSGRRPLELSPGMEVLQSWLQRS
Sbjct:    1 MMYNAIAKCGVLKKKSGMLRRKESR-FYVLTNTGGIFFAKGFAAEFDSLKPLLTLTGSSEVSLERGGSADSGYVMRITTRGNKPPPLELEASSEPETVAWSQVVHDVIELVGTINGDQYAAQPRPLGGLRVGDEGWYLEPTGRMALYTLNSHRRWAVQDRREYDEPTVLNWIAGDRVSRTSSSGSNSARLGYPSQSGASATGSS-ADQ-GSGSPDYPVNSXRXXPDPAPPAHPADYPSQHSHSQSMRSTSAT-MSHLGXXXXXXXXXXXXXXXXXXXXXXXGPNSSFAHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---SADAILVGPLPVLPSVFVVGKGEGNSFGDEADSLVLRRPSTSCSANGXXXXXXXXXXXXXXXXXXXXXXXXXXX---NSHGRLGRVGRWRGGGRGAGATAAAPERRQSGGDSGRRPLELSPGMEVLQSWLQRS 452          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16483.1 vs. uniprot
Match: A0A6H5K968_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K968_9PHAE)

HSP 1 Score: 379 bits (972), Expect = 5.880e-126
Identity = 193/214 (90.19%), Postives = 197/214 (92.06%), Query Frame = 1
Query:   61 RKESRRFYVLTNTGGFFFAKGFAAEFDSLKPLLTLTGSSEVSLERGGSADSGYVMRITTRGNKPPPLELEAEPETVAWSQVVHDVIELVRTINGDQYAAQPRPLGGLRVGDEGWYLEPTGRMALYTLNSHRRWAVQDRREYDEPTVLNWISGDRVSRTSSSGSNSARLGYPSQSGAAATGSSSADQHGSGSPDYPVNSGRGSPDPAPPAHXXDY 702
            R+    FYVLTNTGG FFAKGFAAEFDSLKPLL LTGSSEVSLERG SADSGYVMRITTRGNKPPPLELEAEPETVAWSQVVHDVIELV T+NGDQYAAQPRPLGGLRVGDEGWYLEPTGRMALYTLNSHRRWAVQDRREYDEPTVLNWI+GDRVSR+SS GSNSARLGYPSQSGAAA    SADQ GS SPDYPVNSGRGSPDPAPPAH  DY
Sbjct:   62 RRNDWPFYVLTNTGGIFFAKGFAAEFDSLKPLLMLTGSSEVSLERGVSADSGYVMRITTRGNKPPPLELEAEPETVAWSQVVHDVIELVGTVNGDQYAAQPRPLGGLRVGDEGWYLEPTGRMALYTLNSHRRWAVQDRREYDEPTVLNWIAGDRVSRSSSGGSNSARLGYPSQSGAAAATGFSADQ-GSWSPDYPVNSGRGSPDPAPPAHPADY 274          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig83.16483.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FT48_ECTSI2.430e-20289.39PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5K968_9PHAE5.880e-12690.19Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig83contigE-siliculosus-1a_M_contig83:365004..371217 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1371
Model size1371
Exons8
Ec32 orthologEc-19_003600.1
Ec32 ortholog descriptionPleckstrin homology-like domain
Hectar predicted targeting categorymitochondrion
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig83.16483.1prot_E-siliculosus-1a_M_contig83.16483.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig83 365004..371217 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936273.1728334-CDS-E-siliculosus-1a_M_contig83:365003..3656481622936273.1728334-CDS-E-siliculosus-1a_M_contig83:365003..365648Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig83 365004..365648 -
1696251002.5166466-CDS-E-siliculosus-1a_M_contig83:365003..3656481696251002.5166466-CDS-E-siliculosus-1a_M_contig83:365003..365648Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig83 365004..365648 -
1622936273.1998768-CDS-E-siliculosus-1a_M_contig83:365993..3661011622936273.1998768-CDS-E-siliculosus-1a_M_contig83:365993..366101Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig83 365994..366101 -
1696251002.5292103-CDS-E-siliculosus-1a_M_contig83:365993..3661011696251002.5292103-CDS-E-siliculosus-1a_M_contig83:365993..366101Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig83 365994..366101 -
1622936273.2141223-CDS-E-siliculosus-1a_M_contig83:366407..3665871622936273.2141223-CDS-E-siliculosus-1a_M_contig83:366407..366587Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig83 366408..366587 -
1696251002.544516-CDS-E-siliculosus-1a_M_contig83:366407..3665871696251002.544516-CDS-E-siliculosus-1a_M_contig83:366407..366587Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig83 366408..366587 -
1622936273.2314749-CDS-E-siliculosus-1a_M_contig83:367345..3674071622936273.2314749-CDS-E-siliculosus-1a_M_contig83:367345..367407Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig83 367346..367407 -
1696251002.5551417-CDS-E-siliculosus-1a_M_contig83:367345..3674071696251002.5551417-CDS-E-siliculosus-1a_M_contig83:367345..367407Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig83 367346..367407 -
1622936273.2524772-CDS-E-siliculosus-1a_M_contig83:367996..3681001622936273.2524772-CDS-E-siliculosus-1a_M_contig83:367996..368100Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig83 367997..368100 -
1696251002.5637493-CDS-E-siliculosus-1a_M_contig83:367996..3681001696251002.5637493-CDS-E-siliculosus-1a_M_contig83:367996..368100Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig83 367997..368100 -
1622936273.269826-CDS-E-siliculosus-1a_M_contig83:368636..3687031622936273.269826-CDS-E-siliculosus-1a_M_contig83:368636..368703Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig83 368637..368703 -
1696251002.5724545-CDS-E-siliculosus-1a_M_contig83:368636..3687031696251002.5724545-CDS-E-siliculosus-1a_M_contig83:368636..368703Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig83 368637..368703 -
1622936273.289029-CDS-E-siliculosus-1a_M_contig83:369118..3692491622936273.289029-CDS-E-siliculosus-1a_M_contig83:369118..369249Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig83 369119..369249 -
1696251002.5812647-CDS-E-siliculosus-1a_M_contig83:369118..3692491696251002.5812647-CDS-E-siliculosus-1a_M_contig83:369118..369249Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig83 369119..369249 -
1622936273.3063858-CDS-E-siliculosus-1a_M_contig83:371143..3712171622936273.3063858-CDS-E-siliculosus-1a_M_contig83:371143..371217Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig83 371144..371217 -
1696251002.5897932-CDS-E-siliculosus-1a_M_contig83:371143..3712171696251002.5897932-CDS-E-siliculosus-1a_M_contig83:371143..371217Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig83 371144..371217 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig83.16483.1

>prot_E-siliculosus-1a_M_contig83.16483.1 ID=prot_E-siliculosus-1a_M_contig83.16483.1|Name=mRNA_E-siliculosus-1a_M_contig83.16483.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=457bp
MMHNAIAKCGVLKKKSGMLRRKESRRFYVLTNTGGFFFAKGFAAEFDSLK
PLLTLTGSSEVSLERGGSADSGYVMRITTRGNKPPPLELEAEPETVAWSQ
VVHDVIELVRTINGDQYAAQPRPLGGLRVGDEGWYLEPTGRMALYTLNSH
RRWAVQDRREYDEPTVLNWISGDRVSRTSSSGSNSARLGYPSQSGAAATG
SSSADQHGSGSPDYPVNSGRGSPDPAPPAHPADYPSQSSHSQQSMRSTSA
TMSHLGGGSGAGGGGGGGTWATHAPPAGPNSSFAHGGGGGSRSPEAGGTV
VGGVLVRGGRGGGGDGGGSGGGGGGSADAILVGPLPVLPSVFVVGKGEGN
SFGDEADSLVLRRPSTSCSANGGGGGGGSADGGRGRREEQAGEEVVAVTA
NNNSHGRLGRVGRWRGGGRGTGAAALERRQSGGDSGRRPLELSPGMEVLQ
SWLQRS*
back to top

mRNA from alignment at E-siliculosus-1a_M_contig83:365004..371217-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig83.16483.1 ID=mRNA_E-siliculosus-1a_M_contig83.16483.1|Name=mRNA_E-siliculosus-1a_M_contig83.16483.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=6214bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig83:365004..371217- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGATGCATAACGCGATCGCCAAGTGCGGGGTGCTCAAGAAGAAGTCGGG CATGCTCCGAAGAAAAGAGTCGCGGTGAGAGCGGAGGAAATAGCGCAGCC TACCTATTTACAACTTTTTGCTTGCTGCTCCGCCATTTGTATGTAGCATA CGCTGCTGTGCTACGTGTTGTTGACAACGGCGGGATCGGTGCACGGCTGC TGGTAAACCTCTGAGGAAGCGTGTGGGCATGCAATGGACCAAAGTGGAGT GGGTTAGGATCAGATACAATGGCTGCTGTTTCAGTGGCTTTTCGCAGAAT GTTCCTTGCGCTGCTCCCGGGAACGGCTGTTTTCCGTGGCGAGTTTTGCC CACCCGACGTGTTGGCAGCAGCAGTACACGCACCCGCCACCCCACCCTTC ATGGTTTGGAGTCAGGAGTGGTCACGAGTGACCCTCAATACTGGTTTACG CCTGATAATATTTGTCTAAAGATTGAACCCCTCAAGCATCAGGCAAAACG CTGCTGCTGCTGCTGCTGCCCCCCATTGTATGCGTACCAGCAATAGCCAC GCCCCCCCCCGCCAGCATCACAGCAGCTTGTGTGTGTGTTTGCGCCCTTT CACTGCTGTGAACTTCATGTTGCCATGAACATATCGTCCGCAGAAGAAAG AACCATTCATCCTTGGGCCATATCTATCGATGCGTAGAAATAAGTTATGC ATACATTATTTACTAGGAGGTCTCCCCCTCCGTCCGAATCCCCCCGCTCT CGATGTCGTACAAAAATACCCGGCCCATGATGGGGACGCACAGAATACTT CCGTGCTGTTGCGAACGTTCCGCCCAAGACGATAAGATAAACGCAGAAAC ACAAAAAGCCTCTGATTAGATGATGCGCGCAGTTCCACACCTGGGCTCAG GGGGGGGAAGAAAACCCCTACTTGAGCCGTCTACAATTGTACCTCATGTC TAAGAGCCCCAATCGATCGGTGACAATCGAGAATTTGGCAACACCAGACA ACAGCGTCGTAAACGCGGCCAAACAGCGAGTGTTCGAGATATCCTTCTAG AGATAACAGCGAGACCTCGACGCCCAAGCTCTTATGTAGGTTGCACGGCG GTGGCTCCTTTCCTCGGTGGGTAAGGTACTTCGTTCGCTGTTGCCCCTCG TGGCATCCTGGTAGCGCTTTCCACCCAAGCGACGCGGCGCAACTTCTCTT GTTCGACCTGCGGTATCGTACGGCGATTCTCGCTGCCATGGAAAGGGACG GCTGGACCCTTTTCGCGATAAAAGAAAGAAAAAATTAGCACGCACCGCAG GAGGAAAGTGGGGCACGAAAATGAAAATAACAAGAAGAGAAAAGCCCCGG TGTTTTCCCCCTCCTGTGTGACCCTGGATGGTTGTAGTTGTACATTCGAA AGAATACACTGCAAAGTGCAGTAGTACTCGACATACACTGAAACACGTGT AGTACACGTCTCACCTCGAAAAAAAATAGGACGAAAACAGCAACAACAAC AGCAGCAACCACAACAACAATTGCCCTCATAACCCGCCCATTTAGCGCTC ACGCCGGCACCCCCTTGTCGAAGAGTTAGATTATTGAGTTGAGACAGCCA TGCCATTCTACGCCAGCAGCGAAAACTCAAAGAAGGGTGGGCGAAAAAGA AGCCCCCAAAAGCCGATCTAAACCATGCTCGCACAGATGAGAGGGCACCG GCTCGCTGAGCGATCACACAAGTACACCACTAGTTGCAGGCTCTGTGCGT CCGCCACATTTGGCAAAGCAGGAAGGAACGATTGGCCGTTGGTGATCGAT TACCTGGGAACAATGCCCCCAACCTCTCGAGGTTAACGGTCTAAACAACA ACCCTAGCAACGTAATCAACATGAGTGCGTCCGCCAACCCGTATGTATCG CTTGCAAGTGAGCTCACCTGCTTTTTTCTATACCTGACTCTCTACTGTCG ACCTACCCGACGGAGGAGCAGATTTTACGTGCTAACCAACACGGGCGGGT TCTTCTTCGCGAAAGGCTTCGCCGCCGAGTTCGACTCTCTCAAGCCGTTG CTCACGCTCACCGGTTCATCGGAGGTCTCTCTGGAAAGGGGAGGTTCAGG TACGCGAGAGGAGACCGCCCACGCTTTTCATGCCGCGCACGTGTGCGCTT TTTCTTTCGCGTAAGCGGTTCGGTGTTGCCACGCTCGGGACGATGTTAAG ACACCCAACGGGTTTCCGCGTGCGGCAGGATGTCGCAGCGTTTGTTCTTG GGTCTCGTCGGGGTAAGCGCACGACAGCGGTGTCGGCGTCGTCTTCGGCG GGCAAAGCGCCACCATAGCCTGGGGTCGAGACAAACCAGTATGGGGTACA TAATAGCTTACTGCGAGGGGTAATCCTGCTGTCGCTGTTATTGCAATCCT CAGCCGACCGCCCTCTCTTCACCGCCGTTTCTTTGACCGTTTCTTTGACA CCCCCCCACCCGTGTCGCCCGCGCGCGTACTGTTGTGTTTGCCTCTTGAT CTCTCTCTCTCTAGCCGACTCGGGGTACGTGATGAGGATAACCACGAGGG GGAACAAACCACCGCCTCTGGAGCTAGAGGCGTCAAGGCAAGAGAGCGAG CGAGCGAGCGAGCTTGACGCAGTCGCCGTGTGCACGTTGCACTAGCGTTC CCTGCGAGCTGGTTGAAATATGTGTATACCCAAAGCGATCAGTATTCAGG CAGTATGCTTGAATTACGTGCCAGCAAGCACGCACTGCTGTGGCGTACTG AGTTGTGCCTACCTGCTTGCCTGCCTTTTGAGTGAGCATGCAGCGTTAGA GACCTTCTGGGCGCAAACACGCATCCCAGGTTTTTTTCTACGTGGAACGG GCTTCGTGATACATTTGTTTCTCTGTCGGACGGAGAACGCGTAGGACGCG TTGCGCTCGCGCAAGAAGTGTGTTGGCCTAGCTTATGAGCCGGTGCCGGC TGTCTGCTCCGAGGTGTGAATTTGTGATGTTACTGTAGGTTTTCCGGGAT GTAGGGCGCAGTAGCCTTCGAAACGAGGATTCTGCCGCTCCACCCAGTGA TGTCGATGTCCACCATGCTCCAGAGTCATCACGAAACTTCTGGTTGTGTG CCCTTTTGATGCCGCAGTGAGCCCGAAACTGTGGCTTGGTCTCAAGTGGT TCACGACGTTATCGAGCTGGTCAGGACTATTAACGGAGACCAGTACGCGG CACAGCCTCGGCCGCTAGGAGGTGAGGGCAGGGACAAGCGCGCGCGGGGG GGGCGGGTGGGGCGGGGGGGGGGGTCAGACACAATTATCCTCTCCGTTCA GCACGTTCACGCTCACGTATGGCCTCATCTCCACGTGATATATTTTTTCG TTTGCTACTGCTGTACACCGGTCGTTTCTTTTTTATCGGGTGTTGTTGTG CAGGAATGTGTCTAGGCCTCGCTTTCTTTGTTGCAGTACTCCCGGCCGTG TGTTGTGCACTCGATACTAACCAGCTTGTTGCTTGGGTGCGTTGGTACTG AGGTGTCGGTGACATGCCTAAACTTGAAGCTCATTGACACGGACTGTGCC GCCGTTTTCAAGCGTGATGTTCGCGAGTCGTCATGCCTTTCTGTCTCACT TCTTCAGTCTGTCTCGTGTGGCGGGCGCGTTCACTCTGGCGGTTTTATTG AGGACGGCCTAGTCCCGTGCGATATTCTAGTGAGCAAGCCTGTTTTTGTG TGTTGTTGCTGCGCCGAGTGTACCCAGCCCTTGATGTAGTTTATGGTCCT CCACGTGCTCACGTGTAGCACACGCGCTCGCGCACCCCCTCCCCATGGAC ACACCGGCAGGCTTGAGGGTTGGAGATGAGGGTTGGTATTTGGAACCGAC CGGCCGCATGGCGCTCTACACGGTGAGGTTACCCAGTCAGTCGCTTTGGT TGCTGGTACAGCGAGGTGCACAGCAGTTGCGATGTCGGCTCACCATTTAT GCGCCTGTTTTTTACACGTGGGTTGGTGCCCCTGTCTCCACGTCTCTCTC ACCCTTCCTATACCTGGCGTGTTTCGGTTTAGCCTGAGTTGAATCGTGGT GTTTTGGGGTGGCATATGTACTATTATACCGATCGAGAAATGTATAACGT CCAAGTTGTGAAGGGGAAAAGACGAAAACACGTTCGTTTTTAGAGCCCTC GCACTTGGACGAGTTTGTCACGAAAGCGAATGTCAGTTTTCAAGGAAGCA CGGACCTCGAGCCAGAACCAGTACAAGATGGTGGTTTTCATGGACGACTT GTCTATGTTCACCACAGCACCAAATACTGCTGGATGTAATATTTGCGGTA GTTTGCTGTAGAGGGTCTGCGGAACGCGAGTAGAATGTGCCCTTACTCGC GCCTGTGGATCTCGGGATCATCGTTTGAGACGGAGACTTGCGAGCGCGTT GTATCTAATCAATGTACGGGTGTGTTTCTGACACAACCTCGAGATCTTTC GCCGGAACAAGCCAAAATTTGTAGACCGGGACACCTTCGTGTTATCACCC GCCCCCCATCAAAAGGTCATACTTAGAAAAAAAAAAGAAAAGGGTAAGGA TCGATCACTTGACGGCAAGCGAGAAACGAGTGTACCCCCCCCCCCCCCGC GTTCCATTTCGCCTCTCGCGCCGGGAAAAGCTCAACTCGCACCGAAGGTG GGCAGTGCAAGACAGGAGGGAGTACGACGAGCCCACGGTGCTGAACTGGA TCTCTGGCGACAGAGTGAGCAGGACCAGCAGCAGCGGCAGCAACAGCGCG AGGCTGGGCTACCCCTCGCAAAGCGGGGCTGCTGCTACTGGTTCTTCTTC TGCGGACCAGGTACGTTGTTCCGCCGTACCGTAGGTATTTGTACGGGTGG CGCCGCCGCGCCCCTCCGTGCTGTCCCCGGCTTGCGCCTGCTGCTCGCTC TCTCAAGAGCTAGACGTAGCAAGGGACAAGTGTACGTCCGCCTTTTTTTC TTTGCTCCTTTCTTTTCCGTCGTTCAGGATCGTCCTGCGATACCAAAAAA CCCTTGTCGTCCATCCCGATCGTTTTCCTGTGTGTGTTGTGGGGCCTGAA ACCTCGCACCTCGCCGCACCGGGGCGCGCGCTCTTGTCCCCTCCCGGCAC TCTCGCGCGCATGAAGCACGGCTCTGGGAGCCCAGATTATCCGGTCAACA GCGGCCGCGGATCCCCAGACCCCGCGCCGCCCGCCCACCCGGCCGACTAC CCGAGCCAAAGTTCCCACTCGCAGGTAGGGTTCTTGAGTCGAAACGTGTT CGTGTTGACCAATCAAACGTTGTAGCAGTCGGGCAGGCGCGTGAGACAAG CGCTTGATAAGAGCCAGGCGTGTGTGTTGCTTCCCTAGGCCCGAACCCGC TTTTTTGTTGACATCAACTGTTTTGGGTATTGCCCGCCGTGGTATGTTCT CTCCTCCGTCGACTGCAAGGGGGTGACCGACCACTGTTGGGGTTCGACCC CCTACGGCGCCGCCTGACCCTACTGCCGAGCTGGCTTACCACCAACTCGT ACGATCCCTTTGTCAAACAGCCTGCCTGCTGCCCGTCATTGTCGATACGG CTCCCGGTTGCTCACTCAGCAGTCGATGCGGAGCACAAGCGCCACCATGT CGCATCTGGGCGGCGGCAGCGGGGCCGGCGGCGGCGGCGGCGGTGGCACC TGGGCGACACACGCCCCCCCCGCCGGCCCGAACTCCTCGTTCGCCCACGG CGGGGGCGGCGGCAGCAGAAGCCCAGAAGCCGGCGGTACCGTAGTAGGCG GCGTGTTGGTCAGGGGCGGTAGAGGTGGTGGCGGAGACGGCGGCGGCAGT GGCGGCGGCGGTGGGGGGTCCGCGGATGCGATTCTGGTGGGCCCCCTCCC CGTCCTCCCGTCCGTCTTTGTCGTCGGGAAAGGGGAAGGCAACAGCTTCG GCGACGAAGCGGATAGCCTCGTGCTCAGGAGGCCTTCGACGAGTTGTTCC GCGAACGGCGGCGGCGGCGGAGGCGGCAGCGCAGACGGCGGGCGGGGGCG AAGAGAGGAGCAGGCAGGGGAAGAGGTGGTGGCGGTAACAGCCAACAACA ACTCGCACGGGCGATTGGGGCGTGTGGGTCGGTGGAGGGGCGGCGGCCGG GGGACGGGGGCGGCGGCACTGGAGCGGAGACAATCGGGAGGGGACTCGGG TAGACGGCCCCTCGAATTGTCACCGGGGATGGAAGTTTTGCAGTCGTGGC TTCAACGTTCTTGA
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig83:365004..371217-

>mRNA_E-siliculosus-1a_M_contig83.16483.1 ID=mRNA_E-siliculosus-1a_M_contig83.16483.1|Name=mRNA_E-siliculosus-1a_M_contig83.16483.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2742bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig83:365004..371217- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGATGCATAACGCGATCGCCAAGTGCGGGGTGCTCAAGAAGAAGTCGGG
CATGCTCCGAAGAAAAGAGTCGCGATGATGCATAACGCGATCGCCAAGTG
CGGGGTGCTCAAGAAGAAGTCGGGCATGCTCCGAAGAAAAGAGTCGCGCA
GATTTTACGTGCTAACCAACACGGGCGGGTTCTTCTTCGCGAAAGGCTTC
GCCGCCGAGTTCGACTCTCTCAAGCCGTTGCTCACGCTCACCGGTTCATC
GGAGGTCTCTCTGGAAAGGGGAGGTTCAGCAGATTTTACGTGCTAACCAA
CACGGGCGGGTTCTTCTTCGCGAAAGGCTTCGCCGCCGAGTTCGACTCTC
TCAAGCCGTTGCTCACGCTCACCGGTTCATCGGAGGTCTCTCTGGAAAGG
GGAGGTTCAGCCGACTCGGGGTACGTGATGAGGATAACCACGAGGGGGAA
CAAACCACCGCCTCTGGAGCTAGAGGCCCGACTCGGGGTACGTGATGAGG
ATAACCACGAGGGGGAACAAACCACCGCCTCTGGAGCTAGAGGCTGAGCC
CGAAACTGTGGCTTGGTCTCAAGTGGTTCACGACGTTATCGAGCTGGTCA
GGACTATTAACGGAGACCAGTACGCGGCACAGCCTCGGCCGCTAGGAGTG
AGCCCGAAACTGTGGCTTGGTCTCAAGTGGTTCACGACGTTATCGAGCTG
GTCAGGACTATTAACGGAGACCAGTACGCGGCACAGCCTCGGCCGCTAGG
AGGCTTGAGGGTTGGAGATGAGGGTTGGTATTTGGAACCGACCGGCCGCA
TGGCGCTCTACACGGCTTGAGGGTTGGAGATGAGGGTTGGTATTTGGAAC
CGACCGGCCGCATGGCGCTCTACACGCTCAACTCGCACCGAAGGTGGGCA
GTGCAAGACAGGAGGGAGTACGACGAGCCCACGGTGCTGAACTGGATCTC
TGGCGACAGAGTGAGCAGGACCAGCAGCAGCGGCAGCAACAGCGCGAGGC
TGGGCTACCCCTCGCAAAGCGGGGCTGCTGCTACTGGTTCTTCTTCTGCG
GACCAGCTCAACTCGCACCGAAGGTGGGCAGTGCAAGACAGGAGGGAGTA
CGACGAGCCCACGGTGCTGAACTGGATCTCTGGCGACAGAGTGAGCAGGA
CCAGCAGCAGCGGCAGCAACAGCGCGAGGCTGGGCTACCCCTCGCAAAGC
GGGGCTGCTGCTACTGGTTCTTCTTCTGCGGACCAGCACGGCTCTGGGAG
CCCAGATTATCCGGTCAACAGCGGCCGCGGATCCCCAGACCCCGCGCCGC
CCGCCCACCCGGCCGACTACCCGAGCCAAAGTTCCCACTCGCAGCACGGC
TCTGGGAGCCCAGATTATCCGGTCAACAGCGGCCGCGGATCCCCAGACCC
CGCGCCGCCCGCCCACCCGGCCGACTACCCGAGCCAAAGTTCCCACTCGC
AGCAGTCGATGCGGAGCACAAGCGCCACCATGTCGCATCTGGGCGGCGGC
AGCGGGGCCGGCGGCGGCGGCGGCGGTGGCACCTGGGCGACACACGCCCC
CCCCGCCGGCCCGAACTCCTCGTTCGCCCACGGCGGGGGCGGCGGCAGCA
GAAGCCCAGAAGCCGGCGGTACCGTAGTAGGCGGCGTGTTGGTCAGGGGC
GGTAGAGGTGGTGGCGGAGACGGCGGCGGCAGTGGCGGCGGCGGTGGGGG
GTCCGCGGATGCGATTCTGGTGGGCCCCCTCCCCGTCCTCCCGTCCGTCT
TTGTCGTCGGGAAAGGGGAAGGCAACAGCTTCGGCGACGAAGCGGATAGC
CTCGTGCTCAGGAGGCCTTCGACGAGTTGTTCCGCGAACGGCGGCGGCGG
CGGAGGCGGCAGCGCAGACGGCGGGCGGGGGCGAAGAGAGGAGCAGGCAG
GGGAAGAGGTGGTGGCGGTAACAGCCAACAACAACTCGCACGGGCGATTG
GGGCGTGTGGGTCGGTGGAGGGGCGGCGGCCGGGGGACGGGGGCGGCGGC
ACTGGAGCGGAGACAATCGGGAGGGGACTCGGGTAGACGGCCCCTCGAAT
TGTCACCGGGGATGGAAGTTTTGCAGTCGTGGCTTCAACGTTCTTGACAG
TCGATGCGGAGCACAAGCGCCACCATGTCGCATCTGGGCGGCGGCAGCGG
GGCCGGCGGCGGCGGCGGCGGTGGCACCTGGGCGACACACGCCCCCCCCG
CCGGCCCGAACTCCTCGTTCGCCCACGGCGGGGGCGGCGGCAGCAGAAGC
CCAGAAGCCGGCGGTACCGTAGTAGGCGGCGTGTTGGTCAGGGGCGGTAG
AGGTGGTGGCGGAGACGGCGGCGGCAGTGGCGGCGGCGGTGGGGGGTCCG
CGGATGCGATTCTGGTGGGCCCCCTCCCCGTCCTCCCGTCCGTCTTTGTC
GTCGGGAAAGGGGAAGGCAACAGCTTCGGCGACGAAGCGGATAGCCTCGT
GCTCAGGAGGCCTTCGACGAGTTGTTCCGCGAACGGCGGCGGCGGCGGAG
GCGGCAGCGCAGACGGCGGGCGGGGGCGAAGAGAGGAGCAGGCAGGGGAA
GAGGTGGTGGCGGTAACAGCCAACAACAACTCGCACGGGCGATTGGGGCG
TGTGGGTCGGTGGAGGGGCGGCGGCCGGGGGACGGGGGCGGCGGCACTGG
AGCGGAGACAATCGGGAGGGGACTCGGGTAGACGGCCCCTCGAATTGTCA
CCGGGGATGGAAGTTTTGCAGTCGTGGCTTCAACGTTCTTGA
back to top