mRNA_E-siliculosus-1a_M_contig83.16479.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig83.16479.1
Unique NamemRNA_E-siliculosus-1a_M_contig83.16479.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig83.16479.1 vs. uniprot
Match: D7FT52_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT52_ECTSI)

HSP 1 Score: 397 bits (1020), Expect = 1.650e-133
Identity = 214/216 (99.07%), Postives = 216/216 (100.00%), Query Frame = 3 
Query:    3 MKACAFIAALVACATKSLAFVAPLQSSTLTFSSPRSSLAAAATATSPAPAARQGVSGISMKRKGKPNTNIAQRGSFNQMQQQDMQYQEQRKAMQSGMPSFQIYVRTKVNNMWYPCGLMQGDDKAKATVDAMISGLLKDVSKYSLEKGVASSVLANRKDLVRQVTTAYPQIAGKELTFGFKVIYADLEAKMGKQEVTEITKDMTLGPLDAFKKKMGF 650
            MKACAFIAALVACATKSLAFVAPLQSSTLTFSSPRSSLAAAATATSPAPAARQGVSGISMKRKGKPNTNIAQRGSFNQMQQQDMQYQEQRKAMQSGMPSFQIYVRTKVNNMWYPCGLMQGDDKAKATVDAMISGLLKDVSKYSLEKGVASSVLANRKDLVRQV++AYPQIAGKELTFGFKVIYADLEAKMGKQEVTEITKDMTLGPLDAFKKKMGF
Sbjct:    1 MKACAFIAALVACATKSLAFVAPLQSSTLTFSSPRSSLAAAATATSPAPAARQGVSGISMKRKGKPNTNIAQRGSFNQMQQQDMQYQEQRKAMQSGMPSFQIYVRTKVNNMWYPCGLMQGDDKAKATVDAMISGLLKDVSKYSLEKGVASSVLANRKDLVRQVSSAYPQIAGKELTFGFKVIYADLEAKMGKQEVTEITKDMTLGPLDAFKKKMGF 216
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BLAST of mRNA_E-siliculosus-1a_M_contig83.16479.1 vs. uniprot
Match: A0A836CMT2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMT2_9STRA)

HSP 1 Score: 155 bits (392), Expect = 2.980e-40
Identity = 92/201 (45.77%), Postives = 125/201 (62.19%), Query Frame = 3 
Query:   57 AFVAPLQSSTLTFSSPRSSLAAAATATSPAPAARQGVSGISMKRKGKPNTNIAQRGSFNQMQQQDMQYQEQRKAMQSGMPSFQIYVRTKVNNMWYPCGLMQGDDKAKATVDAMISGLLKDVSKYSLEKGVASSVLANRKDLVR-QVTTAYPQIA--GKELTFGFKVIYADLEAKMGKQEVTEITKDMTLGPLDAFKKKMGF 650
            A+VAP  SS  T  +      AAA      PA R G  G++MKRKGKPN  I  RG +N M + +   + QR +  + +P F+I+ RTK  NMWYPCG + GD+++KATVDA+ +G L D+ + +LEKGVA SVL  +K  ++  +T  YPQ+A     L FGFKV YA LE K+G Q++T +T++M LG  D  KK  GF
Sbjct:   20 AYVAPSASSVFTAGATCRHTQAAA------PAPRGGARGLTMKRKGKPNVPINARGGYNNMMKAEEAMRAQRASTPANLPVFEIFCRTKRANMWYPCGALGGDERSKATVDALSNGFLSDLYRNALEKGVAESVLGPQKSQLKGSITRMYPQLAKEASNLEFGFKVKYAPLEEKLGPQKITLLTEEMKLGAFDKLKKNFGF 214
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BLAST of mRNA_E-siliculosus-1a_M_contig83.16479.1 vs. uniprot
Match: A0A7S2WK66_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WK66_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.990e-25
Identity = 74/172 (43.02%), Postives = 99/172 (57.56%), Query Frame = 3 
Query:  156 RQGVSGISMKRKGKPNTNIAQRGSF--NQMQQQDMQYQEQRKAMQSGMPSFQIYVRTKVNNMWYPCGLMQGDDKAKATVDAMISGLLK--DVSKYSLEKGVASSVLA--NRKDLVRQVTTAYPQI--AGKELTFGFKVIYADLEAKMGKQEVTEITKDMTLGPLDAFKKKMG 647
            R GV+ + M +KGKPN  I QRG F  NQ  Q  M    Q K    G P F +YV+T   NMWYPCG M+GD +AK  V+  ++  L    + K ++++ VASS+    N K+LV QV   YP +  A  +L FG+KV++  LE  +GKQE+  +T DM  GPLD  K   G
Sbjct:   91 RNGVASL-MAKKGKPNVPIQQRGGFVSNQRMQDQMA---QMKPEADGYPVFNLYVQTPRANMWYPCGSMKGDSRAKQLVEGWVANSLGMGGMVKGNIDRSVASSIFTGGNDKNLVDQVCQMYPALKPAKNDLQFGYKVVFEGLEDSVGKQEIQVLTPDMKEGPLDKLKSAFG 258
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BLAST of mRNA_E-siliculosus-1a_M_contig83.16479.1 vs. uniprot
Match: A0A7S3K4J9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4J9_9STRA)

HSP 1 Score: 111 bits (277), Expect = 4.250e-24
Identity = 60/169 (35.50%), Postives = 102/169 (60.36%), Query Frame = 3 
Query:  156 RQGVSGISMKRKGKPNTNIAQRGSFNQMQQQDMQYQEQRKAMQ-SGMPSFQIYVRTKVNNMWYPCGLMQGDDKAKATVDAMISGLLKDVSKYSLEKGVASSVLANRKDLVRQVTTAYPQI--AGKELTFGFKVIYADL-EAKMGKQEVTEITKDMTLGPLDAFKKKMGF 650
            R GV+ + MKRKGK    +   G    M +Q   YQ+  K  + SG+P+F+++VR   +  WYP G + GD+ +K  V++ + G++ D++K ++++GVA S+ +++K L  ++   YPQ+  +   L +G+KV Y  L E +   ++VTE+ +DMT  PLD  K  +GF
Sbjct:   60 RSGVASMEMKRKGKMGPRMPGTGPSQSMLEQQRMYQQMMKEREESGVPTFELFVRGPNSPSWYPAGALGGDENSKELVESWMGGMMSDMAKGAIDRGVAQSLFSDKKSLDAKIIEQYPQLKKSKNNLRYGYKVAYKGLLEKRPNAKDVTELKEDMTEAPLDKVKSALGF 228
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BLAST of mRNA_E-siliculosus-1a_M_contig83.16479.1 vs. uniprot
Match: A0A7S2L426_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L426_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.810e-18
Identity = 59/164 (35.98%), Postives = 87/164 (53.05%), Query Frame = 3 
Query:  174 ISMKRKGKPNTNIAQRGSFNQMQQQDMQYQEQRKAMQ---SGMPSFQIYVRTKVNNMWYPCGLMQGDDKAKATVDAMIS-GLLKDVSKYSLEKGVASSVLANRKDLVRQVTTAYPQIAGK--ELTFGFKVIYADLEAKMGKQEVTEITKDMTLGPLDAFKKKMG 647
            +SMK KGKPN     RGS+ + Q+   Q      A Q    G+P F +++RTK  NMWYPCG  +GD+++ A   +    G+L  +SK  L+KGVA S+  ++K L   +  AYPQ+     +  +G+K+ Y  L  + GK  +  IT     G +D  K   G
Sbjct:   42 MSMK-KGKPNVPPQMRGSYKRQQEMVSQRDAMMAASQPGTDGLPVFNLFIRTKKGNMWYPCGSFKGDERSAALAKSYADDGMLSGISKNQLDKGVAGSIFRDQKKLEESLCRAYPQLRKSRGDFEYGYKLAYEGLSEEQGK--IGMITPQAQSGFMDGIKGMFG 202
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BLAST of mRNA_E-siliculosus-1a_M_contig83.16479.1 vs. uniprot
Match: A0A7S3P7F3_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P7F3_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 5.230e-15
Identity = 57/157 (36.31%), Postives = 82/157 (52.23%), Query Frame = 3 
Query:  186 RKGKPNTNIAQRGSFNQMQQQDMQYQEQRKAM----QSGMPSFQIYVRTKVNNMWYPCGLMQGDDKAKATVDAMISG-LLKDVSKYSLEKGVASSVLANRKDLVRQVTTAYPQIAGKE--LTFGFKVIYADLEAKMGKQEVTEITKDMTLGPLDAFK 635
            +KGKPN     RG + + QQ+  Q +EQ  A     Q G+P F ++VRTK+ N+WYPCG  +GDD++ A   +   G LL  +SK  L+ G+A S+  +   L   V  AYPQ+   +    FG+K+ Y  L  +      T   K+   G LD  K
Sbjct:   44 KKGKPNVPPQMRGQYKK-QQEMAQMREQMVAASKPGQDGLPVFNLFVRTKLANVWYPCGSFKGDDRSAALAKSWADGGLLAGISKKQLDSGIAGSLYRDLPKLKETVVRAYPQLKKNKDSFEFGYKLGYEGLSKEQSSTVFTVEPKEQK-GVLDGIK 198
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig83.16479.1 vs. uniprot
Match: A0A1Z5KGR4_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KGR4_FISSO)

HSP 1 Score: 84.0 bits (206), Expect = 8.810e-15
Identity = 55/160 (34.38%), Postives = 87/160 (54.37%), Query Frame = 3 
Query:  174 ISMKRKGKPNTNIAQRGSFNQMQQQDMQYQEQRKAMQSG---MPSFQIYVRTKVNNMWYPCGLMQGDDKAKATVDAMI-SGLLKDVSKYSLEKGVASSVLANRKDLVRQVTTAYPQI--AGKELTFGFKVIYADLEAKMGKQEVTEITKDMTLGPLDAFK 635
            ++MK KGK N  +  RG + + Q+     +E   A Q+G   +P F ++VRTK  NMWYPCG  +GDD++ A   +   +GLL  +SK  L+ G+A S+  +   L   +  A+PQ+  +  EL FG+K+ +  L+ +  K E+  +      G LD  K
Sbjct:   50 LTMK-KGKSNVPMQMRGQYKKAQELSQMRKEMIAASQAGDDGLPVFNLFVRTKRGNMWYPCGSFKGDDRSAALTKSWADNGLLAGISKKQLDGGIAGSLYRDLDKLKETILRAFPQLRKSKDELEFGYKLSFKGLDEEKAK-EIFVVEPKENKGVLDNIK 207
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BLAST of mRNA_E-siliculosus-1a_M_contig83.16479.1 vs. uniprot
Match: B8C009_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C009_THAPS)

HSP 1 Score: 83.6 bits (205), Expect = 1.200e-14
Identity = 50/147 (34.01%), Postives = 80/147 (54.42%), Query Frame = 3 
Query:  174 ISMKRKGKPNTNIAQRGSFNQMQQQD---MQYQEQRKAMQSGMPSFQIYVRTKVNNMWYPCGLMQGDDKAKATVDAMI-SGLLKDVSKYSLEKGVASSVLANRKDLVRQVTTAYPQIAGKE--LTFGFKVIYADLEAKMGKQEVTEI 596
            ++MK KGKPN     R  + + Q+ +    Q  + + A   G+P F +YVRT + NMWYPCG  +GD+K+ A   ++  +G L  +SK  L+ GV  S+  ++  L   +   YPQ+  ++  L FG+K+ Y  L  +  K  V E+
Sbjct:   52 LTMK-KGKPNLPPQMRSQYARAQEMENYRQQMMDSQNAGADGLPVFNLYVRTGLKNMWYPCGSFKGDEKSAALAQSIADNGFLSGMSKKQLDAGVGGSLFRDKDRLEETIVRGYPQLRKEKGKLEFGYKLSYKGLSKEQEKISVVEV 197
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BLAST of mRNA_E-siliculosus-1a_M_contig83.16479.1 vs. uniprot
Match: A0A7S3DVU2_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DVU2_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 5.400e-14
Identity = 55/175 (31.43%), Postives = 89/175 (50.86%), Query Frame = 3 
Query:  129 TATSPAPAARQGVSGISMKRKGKPNTNIAQRGSF---NQMQQQDMQYQEQRKAMQSGMPSFQIYVRTKVNNMWYPCGLMQGDDKAKATVDAMISG-LLKDVSKYSLEKGVASSVLANRKDLVRQVTTAYPQI--AGKELTFGFKVIYADLEAKMGKQEVTEITKDMTLGPLDAFK 635
            T T+P+ +   G + I MK KGK N     RG +    +MQ    Q    R   + G+P F ++VRTK  N+WYPCG  +GD+++ A   +   G  L  +SK  L+ G+A S+  ++  L   +   +PQ+  +  E  FG+K+ Y  L  +   +    + K+ + GPLD  +
Sbjct:   35 TGTAPSSSVVSGAASIEMK-KGKANVPPQMRGQYAKQKEMQAMRDQVVASRTPTEDGLPVFNLFVRTKRANVWYPCGSFKGDERSAALAKSYSEGGFLSGISKKQLDGGIAGSLWQDQAKLKESIVRGFPQLKKSKDEFEFGYKLGYQGLSEEKSDEMFIVVPKEQS-GPLDGLR 207
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BLAST of mRNA_E-siliculosus-1a_M_contig83.16479.1 vs. uniprot
Match: A0A7S2S5A2_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S5A2_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 6.490e-14
Identity = 56/145 (38.62%), Postives = 81/145 (55.86%), Query Frame = 3 
Query:  186 RKGKPNTNIAQRGSFNQMQQ-QDMQ--YQEQRKAMQSGMPSFQIYVRTKVNNMWYPCGLMQGDDKAKATVDAMIS-GLLKDVSKYSLEKGVASSVLANRKDLVRQVTTAYPQI--AGKELTFGFKVIYADL---EAKMGKQEVTE 593
            +KGK N     R  + + Q+   MQ    + +K    G P F ++VRTK  NMWYPCG  +GDDK+ A   + +  G++  VSK  L+ GVA S+  + + L   VT AYPQ+  +  EL FG+K+ YA L   ++K+ K E  E
Sbjct:   61 KKGKANVPPQMRSQYKRQQEISSMQKSMMDAQKPGADGFPVFNLFVRTKRANMWYPCGSFKGDDKSGALAASYVDDGMMAGVSKNQLDAGVAGSLFRDFERLKGTVTRAYPQLRKSQDELEFGYKLGYAGLTEEQSKINKVEPKE 205
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig83.16479.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D7FT52_ECTSI1.650e-13399.07Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CMT2_9STRA2.980e-4045.77Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2WK66_9STRA1.990e-2543.02Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3K4J9_9STRA4.250e-2435.50Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2L426_9STRA1.810e-1835.98Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A7S3P7F3_9STRA5.230e-1536.31Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A1Z5KGR4_FISSO8.810e-1534.38Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
B8C009_THAPS1.200e-1434.01Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S3DVU2_9STRA5.400e-1431.43Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S2S5A2_9STRA6.490e-1438.62Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig83contigE-siliculosus-1a_M_contig83:341472..347123 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size651
Model size1766
Exons6
Ec32 orthologEc-19_003560.1
Ec32 ortholog descriptionconserved unknown protein
Hectar predicted targeting categorychloroplast
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
EggNOG OGs2C200@1,2S7SE@2759
Seed eggNOG ortholog2880.D7FT52
Seed ortholog evalue1.6e-109
Seed ortholog score402.1
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig83.16479.1prot_E-siliculosus-1a_M_contig83.16479.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig83 342585..347121 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936272.4231598-UTR-E-siliculosus-1a_M_contig83:341471..3425841622936272.4231598-UTR-E-siliculosus-1a_M_contig83:341471..342584Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig83 341472..342584 -
1696251002.054654-UTR-E-siliculosus-1a_M_contig83:341471..3425841696251002.054654-UTR-E-siliculosus-1a_M_contig83:341471..342584Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig83 341472..342584 -
1622936272.5278025-UTR-E-siliculosus-1a_M_contig83:347121..3471231622936272.5278025-UTR-E-siliculosus-1a_M_contig83:347121..347123Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig83 347122..347123 -
1696251002.1324856-UTR-E-siliculosus-1a_M_contig83:347121..3471231696251002.1324856-UTR-E-siliculosus-1a_M_contig83:347121..347123Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig83 347122..347123 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936272.4354367-CDS-E-siliculosus-1a_M_contig83:342584..3426771622936272.4354367-CDS-E-siliculosus-1a_M_contig83:342584..342677Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig83 342585..342677 -
1696251002.0689747-CDS-E-siliculosus-1a_M_contig83:342584..3426771696251002.0689747-CDS-E-siliculosus-1a_M_contig83:342584..342677Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig83 342585..342677 -
1622936272.4489555-CDS-E-siliculosus-1a_M_contig83:343197..3432691622936272.4489555-CDS-E-siliculosus-1a_M_contig83:343197..343269Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig83 343198..343269 -
1696251002.0787604-CDS-E-siliculosus-1a_M_contig83:343197..3432691696251002.0787604-CDS-E-siliculosus-1a_M_contig83:343197..343269Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig83 343198..343269 -
1622936272.4652267-CDS-E-siliculosus-1a_M_contig83:344066..3442171622936272.4652267-CDS-E-siliculosus-1a_M_contig83:344066..344217Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig83 344067..344217 -
1696251002.090034-CDS-E-siliculosus-1a_M_contig83:344066..3442171696251002.090034-CDS-E-siliculosus-1a_M_contig83:344066..344217Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig83 344067..344217 -
1622936272.479109-CDS-E-siliculosus-1a_M_contig83:344811..3449001622936272.479109-CDS-E-siliculosus-1a_M_contig83:344811..344900Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig83 344812..344900 -
1696251002.1020985-CDS-E-siliculosus-1a_M_contig83:344811..3449001696251002.1020985-CDS-E-siliculosus-1a_M_contig83:344811..344900Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig83 344812..344900 -
1622936272.4924054-CDS-E-siliculosus-1a_M_contig83:345196..3452981622936272.4924054-CDS-E-siliculosus-1a_M_contig83:345196..345298Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig83 345197..345298 -
1696251002.1120186-CDS-E-siliculosus-1a_M_contig83:345196..3452981696251002.1120186-CDS-E-siliculosus-1a_M_contig83:345196..345298Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig83 345197..345298 -
1622936272.5105128-CDS-E-siliculosus-1a_M_contig83:346977..3471211622936272.5105128-CDS-E-siliculosus-1a_M_contig83:346977..347121Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig83 346978..347121 -
1696251002.122345-CDS-E-siliculosus-1a_M_contig83:346977..3471211696251002.122345-CDS-E-siliculosus-1a_M_contig83:346977..347121Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig83 346978..347121 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig83.16479.1

>prot_E-siliculosus-1a_M_contig83.16479.1 ID=prot_E-siliculosus-1a_M_contig83.16479.1|Name=mRNA_E-siliculosus-1a_M_contig83.16479.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=217bp
MKACAFIAALVACATKSLAFVAPLQSSTLTFSSPRSSLAAAATATSPAPA
ARQGVSGISMKRKGKPNTNIAQRGSFNQMQQQDMQYQEQRKAMQSGMPSF
QIYVRTKVNNMWYPCGLMQGDDKAKATVDAMISGLLKDVSKYSLEKGVAS
SVLANRKDLVRQVTTAYPQIAGKELTFGFKVIYADLEAKMGKQEVTEITK
DMTLGPLDAFKKKMGF*
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mRNA from alignment at E-siliculosus-1a_M_contig83:341472..347123-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig83.16479.1 ID=mRNA_E-siliculosus-1a_M_contig83.16479.1|Name=mRNA_E-siliculosus-1a_M_contig83.16479.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5652bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig83:341472..347123- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CCATGAAGGCGTGCGCTTTCATAGCTGCCCTGGTAGCTTGCGCGACCAAG
TCGCTGGCTTTCGTGGCCCCGCTTCAATCATCCACCCTGACCTTCTCCAG
CCCCCGCTCAAGCCTCGCAGCAGCAGCAACAGCAACATCACCAGCGGTGA
GTCACGACCATGCACGCAGAGAGGCGCACAACGGGAAACTCTTTGGGCGG
CGTGCAGGGTGGTGCGATCGTCGAGAGTTGGCGGCAGCTGTGTTACCGCT
GAAGCCTGTGCGGGGCTCTGTTGGATGTCGGTGTGTGTGTCAGAAAAAAC
ATGAGCGGCGGCCCTGACGGATGACACCACGCAGCACACTGGGGCGGGGG
GGGATGGTGGCAACGAGCTCATGGTCATGGCTTCGGATACCAACACGTGT
CGGGTGGGCGGAGGGGAAGTGAAAGGCCAAGCGTTGATTGTAGTCGTGCC
CCTTTCGGTTTAAAGTGGTGGTATTGATGTCGTCATCAAACCAGGCTCTT
GCTTCGCGCTGTATCTGCTGTGTATTTGCTGTGTATTTTTGTAACAGCAG
CAGTACGTGTATGTTGCAACAGCAGCATTTACATGTACTTGCTGTTCTAC
GGGTACAGCTACCCTGCCCTGGTACCGTAAGATTGCGAGTCAGAGCACAG
GGGTGCGATCCATTTTCAAAGCGTAATTTCTCCACAACCAGGATGGTGCG
AGCGCCAACCGATTCTTCTCTGGAAAACTCGCGATGAGATATTTCCAAAA
CCATCTATTTCGACAGTGGTGGTAACCTCCATGTTGTGGAGAAATTACGC
TTTGAAAATCGTTCGCACCCCAGTGTGCTGACTCGCAACCTTACGGTACA
CTACATATCTAGGAGGCAAAAGGCGTTGATCTGACTCCTTATCGTCGATT
ACCGCAGCCGGCGTACAGGGGGGGGGCTGTGTGAGGTGTTAACGTGCCAA
TTACCACACAGAGCTGCTATTAATACAATGCTACGGGGTGACAAAACATC
CAATTCTGGCTGTTTTTTTACCCCAAGCCAACTACAACAATGGTAGCTAC
AACCAGACGAATTCCGAGGCCAGCGTGTTAGCTCATTGTTAGCCAATAGG
TCCACAGGCAGTTCATCACTCATGCGTTATGAGCGTATTTTACAGGAGTA
CTTGAGTCGAAGGAGGTACGCTGTTGGATGGCACGACCATAACTGGGCGC
TCATGAATAATGTCCTTTTTGTCGATCCATACTTACTAAGCACGAACGAC
AGCGCTACCTTCGGCCGCAGCGTTGGTCACCACACCGCCCGAAGTGTCGC
CGATTGAACCCCCCTCGGCTGGTGTCGATTGATGACATACAGGCAGGATC
ATGATAGCAAGGGCCAACAAGAAGGAAACTCGAAAACTCAAGGGTACAAG
TAGCTGATCGTGCAGACAAGCCCTCTTTGCTTAGTTGTGCCCGAGGCCAC
CCAGGGTACTCTGCGCCTCAGTCGTCTCTTGATGCATTTATCTTCGGGAA
ACAGCTATGGAATTCGAACCGTGTGGGTATTAGCTTCAAGAGATACCTGA
CTCTTCTCTCCCGACCGAGGATGGGATAAATTTGGAGGAGGCAAGCGTCG
AAGACGCCCACTCTCTTCCTTGCTCGAGAATTGTTCCTTCTCCCGGTACC
TGCATTTGGCCACCAGTCCCATCCCGTTTTTGAGGTCGGATCGGAATCAA
AACGCACCATTGTCGTAGATAGTGTCGACGCGTCATCGTCGACTCTCGCA
CTCTCTCGTCCCTCATTCTGTGGTTGACCTATTCCCCCCCTCACACCGAC
GTCGTCGTTTGTTTTCAACGAAAAGCCGGCGGCACGGCAAGGCGTGTCGG
GCATCTCGATGAAGCGCAAGGGCAAGCCGAACACGAACATCGCGCAACGA
GGGAGCTTCAACCAGATGCAGCAACAGGTGGGCCCCCCACGAAAGCGTCT
CTCAGTCATCACAAGAGCGAAAGAGTTACAGAACCAAGGGTGCCTGGCGT
TCATGACGTGAAGTGCTTCTTTTTTTGGCACCGGATTATCTTCGCGTCCG
AACGTGAATATGCTAGTGATTTGATTGAGCTTAGTATGTGGGATAGATGA
GCTCGCTTTTCTGTTTTTGGCGGTAGATGACTCGTTGCAGTCGACACAAC
GATCCCAGCCTCGTCAAACACAAACCCCGTCTCGAACGAATTTGGTGCCT
CGGTGCGTTCACGTTTTGAACAGGACATGCAATATCAGGAGCAGCGAAAG
GCGATGCAGTCGGGGATGCCATCTTTCCAGATCTACGTGCGAACGAAGGT
CAACAACATGTGGTGAGCACCCGGAGCAGGGCTGAGATATCGTTGTGTAT
ACGGTATTGTGCTCGAGACTTTTGTCCCCCTCACAAAACCCTCTTCGAGC
GAGTACCGAGGACGGAAAGGTCTACGGGAGGGCCGGCAGAGCGATATGTA
GGGGTGTGGCTGGGGCCGGGGGGGGGTGCTCCAGTGGGCAGGAGTGACGT
CTTTTTCTGGGTGCCCTCCGGTTGGGATTCATTGCATTGATGCTGCGGCG
GGGCAATGCGTATCTCCTGGACTTGACAACGCATGCGTCCGCGTATGTAT
TGAGCCTGGTACGCTCCGTTTGTGCCGTGCATCTGCTTCAGCTGTTTTCT
CCCAACCCCTAGGCCGGTGTGGCACCCATGCGGGCACGAAGGTGAGACTC
CCCCACGGGGATCGCACACGCTACGTAGGGGCGCGCGCAGCCTTACAAGC
GCGTACCGTGTTCAGGAGGGTTGGCAAGCCGATGCGAACGCTCTCTTTTG
TCTGATGTCTGATCACTTTGTTGGTGCTATGACACCACAACCAGTGGCAG
CTGTTGCGCACGCCAACGTTGTGCCGCCCGCACCTACGGCTCCCCTCGCC
GGGCAGGTACCCGTGCGGGCTGATGCAGGGAGACGACAAGGCAAAAGCCA
CGGTGGACGCGATGATATCGGGGCTGCTGAAGGACGTCTCGAAGTACTCG
CTGGAGAAGGGGGTCGCCTCGAGCGTGCTGGCGAACCGGAAGGACCTCGT
CCGACAGGTGTGTGGTGTGTGTGTGCGGCGGCAGGGCGGGACGGTGTCGT
GTAGCACGCCGGCATCCGAGTTTGGACCCTCGGGGTGCTGTCGGGTTGCC
CTTGACGTCTCCGCCCTTTGCGAAAAGAATGGAAGAAATTTCCCTTTAAG
AACGAGGTGCACGTTTTCTTTATAGAGGCCTTGACGTTTGCGAAAGACCA
GACATCGACCAGCGAGCTATCCCTCGGTGCTCGATCCGGGAACAGAATTA
ATGGAAAGAGCGAAACCACCCGCATATGCGACTGCGCTGCCACGCCTCAA
GCACCGGTGAATTTTCAAAGCTCTATTGCTCCATGGGTGCCAACTCTGAA
GGATAGCTAGCAATTCGGGAAGGCTTCGATGAGACCTTTTCAACCACCCT
GCACCGACATTTTTGTTCTCCTGTGGAGCAATCGAGCTTTGAATATCGGG
CCGAGGGGGGTCTGGTATACACCACCGTAGGAAGCCTGTTGGGGCCGCAT
GATTTTTGATCGCGATCACGAACATGCCGAGGGCATGAAACGACAAACAG
CCGTTTTGAGTGAGTGGACAGCGGGGGAATTCAACTTCCTCTCGCCAATG
TTTGACGTCGATAGAACGCCCCAATGCTGGTATCAGAGGAGGCACGCCGT
GCTACACATGATTCCAGACCCACAACGGAAAGAAAATTGTGTTGAGCATG
GTCTGTAGCAGTTCAGGGTTGCGGCGGCGACAGTTTTTGTGTATGTATTC
AAGTTAAATTATTTTATTTTTTCGCGGTGTCTCCCCGCCCCACTCCTGCT
GCAGGTCACCACGGCGTATCCTCAGATCGCTGGAAAGGAGCTGACCTTTG
GGTTCAAGGTCATCTACGCGGATCTGGTGAGCACGCGGCTTTCTGTCACC
ATTTTTTCGCTCCAGGTCTTGGTTGATGCTGCGATGCTCGTGGTGTCGTC
GGAATTATTCACACCCCAGGTTGCTGTGTACACGTGCATAGGGAATCACG
TACAGTTGGCCAAAGGGGGTGTGCTTGCTACTCCTTCTTGTACGCTTGTC
GAATCTGTGGGGTATTGTTTGCCCTTCCTGAAGGTCTTCGCGTTGCGTCG
CTTGAAGGTGTAACAAGTTTCCGGGCTATCTTGGCCGAGTCTCGTGGCAT
TGTGCGATGCGATGGGTTGTTAAAATGATTGGTGGAGAAAAAGGCGAGGA
GATAAGTTTGTTGGAGACGACTGGCCTCGCGCGATTACATGTTTCTACCT
TGCGAGGTTTGCCTTTGTAGGTAGAAAGTAGGTGTTGAGGTAATCGAAGA
GGCCCTTCCACTCGATGCATGTTACCCACTCTCGTACGCTGTGCGCACAC
CCCACGTTACTTGCCCACGCATCGTTTTCTTTTTGTTTCGCTGCAGGAGG
CGAAAATGGGCAAGCAGGAGGTGACGGAGATCACTAAGGACATGACCTTG
GGCCCCCTGGACGCCTTCAAGAAGAAAATGGGGTTCTAAGAGGGAGAGGG
GGTTCTGGTCGCCTTTTTCTTGTTTGGCTTGCCCTCTGCACCGGTGACGG
GATAGGAGCACGTCGCCTAACCACAGCGCGGATGGATCGAAGACAGAGGT
TTTACTGCACGCTGCATGGATCCACCATTCTGCAATATAGATAGAGCTCG
GCGAGTGGTAGGGACGGGTGCATGTGCGGCGATGGGCTATCCCTCGCGTC
TCCCATTGATTGTTCCATTGCGCGCTGGACGGCGGCCGGCGTTAGAGAGC
TCCTTTCGCCTCCCGACAGTGATTTGAAATTTGACTGTGTGGTTGGACGG
CTGGCTGCAGCTGCTGCAAATAAATATAGTGGACAAACGCGTGGTCGTAT
GGCGCCTCCGTCTATTTCGGAGTAGCGATGGATTTCGCTGAGGGTGGTGG
AGCGGAATATCGGCCCAGTGTGCGTGCGCAAGATTTTCTTCATTCGCGAT
GCCTCAGGAACGGCAAATATATCTATTTTTTTGACACGTACCACAAAGGC
GCCAGCCGTGGAGTCAACAGGCACAGATCGATTTCATTTGGTCGGGGTAC
CGCAAGCGTAGAGTACCAGGTATATAGTTTCGTGGCCCTTGTACGTACCA
GCACGGGCACAGCGCGGGACGCCAAACTCCGGGCCTTTGAAGCTTGCTCG
GACAATACGAATGGTGACGAGGATGTCTCCGCAGACTACTTGCTGCCCGT
TAAATGCGATTGAGTAGGTGTCGTAGCGGAAGCGCACTACTGCTGCTGTT
GTGGGCTAATGTTTCCGGTCTCTTTTGTTGCCCTCGTGTGTAAGATGATG
TCCCCGGTTTTAAGTGATGCGCCGTGCCCGGAGCGCTTTGCCAGGCTCGT
GGCTGATGCTTGTCATTGCGTGCTTGCCCTTTGATATCGTGCCGAGCACA
GACTAAAGATGAATTCATGCCGCAAGTATTTGTTGTGAGATTTGTTACCA
ACAGAGTCTGGCTCACGATGGTGGTGTAGAAAACAAAGCGCTTTGTGCCT
GATTGACCCAGTCGCATCTCGGGAAGAACAAGGAGCCTGTTGAAACCCTT
ACCGTTGCAAACAAATTGGAGGTACCGACGTGACACAAGATACCACACCC
CC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig83:341472..347123-

>mRNA_E-siliculosus-1a_M_contig83.16479.1 ID=mRNA_E-siliculosus-1a_M_contig83.16479.1|Name=mRNA_E-siliculosus-1a_M_contig83.16479.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1302bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig83:341472..347123- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGAAGGCGTGCGCTTTCATAGCTGCCCTGGTAGCTTGCGCGACCAAGTC
GCTGGCTTTCGTGGCCCCGCTTCAATCATCCACCCTGACCTTCTCCAGCC
CCCGCTCAAGCCTCGCAGCAGCAGCAACAGCAACATCACCAGCGATGAAG
GCGTGCGCTTTCATAGCTGCCCTGGTAGCTTGCGCGACCAAGTCGCTGGC
TTTCGTGGCCCCGCTTCAATCATCCACCCTGACCTTCTCCAGCCCCCGCT
CAAGCCTCGCAGCAGCAGCAACAGCAACATCACCAGCGCCGGCGGCACGG
CAAGGCGTGTCGGGCATCTCGATGAAGCGCAAGGGCAAGCCGAACACGAA
CATCGCGCAACGAGGGAGCTTCAACCAGATGCAGCAACAGCCGGCGGCAC
GGCAAGGCGTGTCGGGCATCTCGATGAAGCGCAAGGGCAAGCCGAACACG
AACATCGCGCAACGAGGGAGCTTCAACCAGATGCAGCAACAGGACATGCA
ATATCAGGAGCAGCGAAAGGCGATGCAGTCGGGGATGCCATCTTTCCAGA
TCTACGTGCGAACGAAGGTCAACAACATGTGGACATGCAATATCAGGAGC
AGCGAAAGGCGATGCAGTCGGGGATGCCATCTTTCCAGATCTACGTGCGA
ACGAAGGTCAACAACATGTGGTACCCGTGCGGGCTGATGCAGGGAGACGA
CAAGGCAAAAGCCACGGTGGACGCGATGATATCGGGGCTGCTGAAGGACG
TCTCGAAGTACTCGCTGGAGAAGGGGGTCGCCTCGAGCGTGCTGGCGAAC
CGGAAGGACCTCGTCCGACAGGTACCCGTGCGGGCTGATGCAGGGAGACG
ACAAGGCAAAAGCCACGGTGGACGCGATGATATCGGGGCTGCTGAAGGAC
GTCTCGAAGTACTCGCTGGAGAAGGGGGTCGCCTCGAGCGTGCTGGCGAA
CCGGAAGGACCTCGTCCGACAGGTCACCACGGCGTATCCTCAGATCGCTG
GAAAGGAGCTGACCTTTGGGTTCAAGGTCATCTACGCGGATCTGGTCACC
ACGGCGTATCCTCAGATCGCTGGAAAGGAGCTGACCTTTGGGTTCAAGGT
CATCTACGCGGATCTGGAGGCGAAAATGGGCAAGCAGGAGGTGACGGAGA
TCACTAAGGACATGACCTTGGGCCCCCTGGACGCCTTCAAGAAGAAAATG
GGGTTCTAAGAGGCGAAAATGGGCAAGCAGGAGGTGACGGAGATCACTAA
GGACATGACCTTGGGCCCCCTGGACGCCTTCAAGAAGAAAATGGGGTTCT
AA
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