mRNA_E-siliculosus-1a_M_contig83.16475.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig83.16475.1 vs. uniprot
Match: D7FT55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT55_ECTSI) HSP 1 Score: 824 bits (2128), Expect = 3.440e-292 Identity = 437/475 (92.00%), Postives = 439/475 (92.42%), Query Frame = 1
Query: 103 MKFLSMTAGPLLLXXXXXXXXXXXXXXXXXXXXXXXXXYSSDXXXXXXXDSYDA-SVGTTGESSDAATSSSPSTDAEVYPEPMSYGNXXXXXXXXXXSSSSDSVEATAEPTDYYVETTDGGEEAITMGSGTDDXXXXEGAPMENPDDGASCSTYDEDVEVAKLLDSTCEWDTYMCCWTGNDGADGMTANSDVCRVLDYPEEGDSFEMPRDSEGSVYCHGFAWAEGADVDTHILPLYHYVKNVGRTEEGGFYGNVEGVPECGCIEEMPQVSYSECSRYSWEGIVGCGNNGLLSQYRGRLGEPYGPMDDNLVRACDNEDVPDYDYGSCSHNTYMCCWTENDGQGMADNTDVCRVVDYPSMGETLEFPGDSEGEVHCHGFVWPEDATDKYIHLLSQFVQNFDHRDRRGYYGNIEGAPMCGCIEEMPVVSEADCTTYDTDPEREGKFTACTKNDLRTRYEEEYPTGELANLVDTCDNAE 1524
MKFLSMTAGPLLL XXXXXXXXXXXXXXXXXXXXX XXXXXX SYDA SVGTTGESS AATSSSPSTDAEVYPEPMSYG XXXXXXXXXX TDYYVE TDGGEE ITMGSGTDD EGAPMENPDDGASCSTYDEDVEVAKLLDSTCEWDTYMCCWTG+DGADGMTANSDVCRVLDYPEEGDSFEMPRDSEGSVYCHGFAW EGADVDTHILPLYHYVKNVGRTEEGGFYGNVEG PECGCIEEMPQVSYSECSRYSWEGIVGCGNNGLLSQYRGRLGEPYGPMDDNLVR CDNEDVPDYDYGSCSHNTYMCCWTENDG+GMADNTDVCRVVDYPSMGETLEFPGDSEGEVHCHGFVWPEDATDKYIHLLSQFVQNFDHRDRRGYYGNIEGAPMCGCIEEMPVVSEADCTTYDTDPEREGKFTACTKNDLRTRYE EYPTGELANLVDTCDNAE
Sbjct: 1 MKFLSMTAGPLLLALAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSYDATSVGTTGESSQAATSSSPSTDAEVYPEPMSYGXXXXXXXXXXXXX----XXXXXXXTDYYVEATDGGEETITMGSGTDDGGEEEGAPMENPDDGASCSTYDEDVEVAKLLDSTCEWDTYMCCWTGSDGADGMTANSDVCRVLDYPEEGDSFEMPRDSEGSVYCHGFAWVEGADVDTHILPLYHYVKNVGRTEEGGFYGNVEGAPECGCIEEMPQVSYSECSRYSWEGIVGCGNNGLLSQYRGRLGEPYGPMDDNLVRTCDNEDVPDYDYGSCSHNTYMCCWTENDGEGMADNTDVCRVVDYPSMGETLEFPGDSEGEVHCHGFVWPEDATDKYIHLLSQFVQNFDHRDRRGYYGNIEGAPMCGCIEEMPVVSEADCTTYDTDPEREGKFTACTKNDLRTRYEAEYPTGELANLVDTCDNAE 471
BLAST of mRNA_E-siliculosus-1a_M_contig83.16475.1 vs. uniprot
Match: D7G2N0_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D7G2N0_ECTSI) HSP 1 Score: 614 bits (1583), Expect = 1.590e-209 Identity = 295/427 (69.09%), Postives = 340/427 (79.63%), Query Frame = 1
Query: 259 DASVGTTGESSDAATSSSPSTDAEVYPE-PMSYGNXXXXXXXXXXSSSSDSVEATAEPTDYYVETTDGG--EEAITM--GSGTDDXXXXEGAPMENPDDGASCSTYDEDVEVAKLLDSTCEWDTYMCCWTGNDGADGMTANSDVCRVLDYPEEGDSFEMPRDSEGSVYCHGFAWAEGADVDTHILPLYHYVKNVGRTEEGGFYGNVEGVPECGCIEEMPQVSYSECSRYSWEGIVGCGNNGLLSQYRGRLGEPYGPMDDNLVRACDNEDVPDYDYGSCSHNTYMCCWTENDGQGMADNTDVCRVVDYPSMGETLEFPGDSEGEVHCHGFVWPEDATDKYIHLLSQFVQNFDHRDRRGYYGNIEGAPMCGCIEEMPVVSEADCTTYDTDPEREGKFTACTKNDLRTRYEEEYPTGELANLVDTCDNAE 1524
DA+ G + + AT P+T E+YP+ SY + S +E T+ PT+YYVETT+ G E+ T GS + XXXXE PMENP+DG SCSTYDEDV+VA +L TCEW+TYMCCWTG+DG+ GM N+DVCRVLDYPEEGD E+PRD EG VYCHGFAWA+ AD+D+HILPLYHYV NV RT++GG+YGNVEGVP CGCIE+MP VS + CS++ EGI C +N L SQY+ +L EP G M+ NLVR CDNEDVPDYD+ +C+HNTYMCCWTENDGQGMADNTDVCRV+DYPSMGET E+PG+SEGEVHCHGFVWPEDATDKYIHLL+QFVQ+FDHRDRRGY+GNIEGAPMCGCIEEMP VSEADCTTYD +P REGKFTACT NDLRTRYEEEYP GEL NLV CDNAE
Sbjct: 61 DANAGPNDDYTSPATXXXPTT--EIYPDLNESYEAEVTPEPVMDTPAPSPDMETTSGPTEYYVETTEDGDMEKVPTSDGGSKEEXXXXXEPIPMENPEDGMSCSTYDEDVDVATILPETCEWNTYMCCWTGHDGSKGMYGNADVCRVLDYPEEGDVLELPRDDEGPVYCHGFAWADDADIDSHILPLYHYVTNVNRTDDGGYYGNVEGVPSCGCIEDMPVVSDAACSKFGGEGIEPCWDNSLRSQYKYKLDEPKGEMEYNLVRECDNEDVPDYDFRTCNHNTYMCCWTENDGQGMADNTDVCRVIDYPSMGETTEYPGESEGEVHCHGFVWPEDATDKYIHLLAQFVQHFDHRDRRGYFGNIEGAPMCGCIEEMPQVSEADCTTYDNEPGREGKFTACTNNDLRTRYEEEYPMGELDNLVGECDNAE 485
BLAST of mRNA_E-siliculosus-1a_M_contig83.16475.1 vs. uniprot
Match: D7G2N2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2N2_ECTSI) HSP 1 Score: 618 bits (1594), Expect = 3.450e-207 Identity = 292/416 (70.19%), Postives = 335/416 (80.53%), Query Frame = 1
Query: 298 ATSSSPSTDAEVYPEPMSYGNXXXXXXXXXXSSS-SDSVEATAEPTDYYVETTDGGE-EAITMGSGTDDXXXXEGA---PMENPDDGASCSTYDEDVEVAKLLDSTCEWDTYMCCWTGNDGADGMTANSDVCRVLDYPEEGDSFEMPRDSEGSVYCHGFAWAEGADVDTHILPLYHYVKNVGRTEEGGFYGNVEGVPECGCIEEMPQVSYSECSRYSWEGIVGCGNNGLLSQYRGRLGEPYGPMDDNLVRACDNEDVPDYDYGSCSHNTYMCCWTENDGQGMADNTDVCRVVDYPSMGETLEFPGDSEGEVHCHGFVWPEDATDKYIHLLSQFVQNFDHRDRRGYYGNIEGAPMCGCIEEMPVVSEADCTTYDTDPEREGKFTACTKNDLRTRYEEEYPTGELANLVDTCDNAE*F 1530
AT+ SP+T E+YP+ Y + + S +E T+ PT+YYVETT+ G+ E + M G + XXX PMENP+DG SCSTYDEDV+VA +L TCEW+TYMCCWTG+DG+ GM N+DVCRVLDYPEEGD E+PRD EG VYCHGFAWA+GAD+D+HILPLYHYV NV RT++GG+YGNVEGVP CGCIE+MP VS + CSR+ EGI CG N L S Y+ RL EP G ++ NLVR CDNEDVPDYD+ +C+HNTYMCCWTENDGQGMADNTDVCRV+DYPSMGET E+PG+SEGEVHCHGFVWPEDATDKYIHLL+QFVQ+FDHRDRRGY+GNIEGAPMCGCIEEMP VSEADCTTYD +P REGKFTACTKNDLRTRYEEEYP GEL NLV CDN E F
Sbjct: 31 ATTPSPTT--EIYPDLGEYYEAEVTPEPVVDTPAPSPDMETTSGPTEYYVETTEDGDMEKMPMSDGGSEKXXXXXXXPIPMENPEDGMSCSTYDEDVDVANILPETCEWNTYMCCWTGHDGSGGMYGNTDVCRVLDYPEEGDVLELPRDDEGPVYCHGFAWADGADIDSHILPLYHYVTNVNRTDDGGYYGNVEGVPSCGCIEDMPVVSDAACSRFGREGIEPCGANSLRSHYKNRLDEPKGELEYNLVRECDNEDVPDYDFRTCNHNTYMCCWTENDGQGMADNTDVCRVIDYPSMGETTEYPGESEGEVHCHGFVWPEDATDKYIHLLAQFVQHFDHRDRRGYFGNIEGAPMCGCIEEMPQVSEADCTTYDNEPGREGKFTACTKNDLRTRYEEEYPMGELDNLVGECDNEELF 444
BLAST of mRNA_E-siliculosus-1a_M_contig83.16475.1 vs. uniprot
Match: A0A6H5L319_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L319_9PHAE) HSP 1 Score: 593 bits (1529), Expect = 4.620e-202 Identity = 294/425 (69.18%), Postives = 306/425 (72.00%), Query Frame = 1
Query: 520 PMENPDDGASCSTYDEDVEVAKLLDSTCEWDTYMCCWTGNDGADGMTANSDVCRVLDYPEEGDSFEMPRDSEGSVYCHGFAWAEGADVDTHILPLYHYVKNVGRTEEGGFY-----GNVEGVPECGCIEEMPQVSYSECSRYSWEGIVGCGNNGLLSQYRGRLGEPYGPMDDNLVRACDNEDVPDYDYGSCSHNTYMCCWTENDGQGMADNT----------------------------------------DVCRVVDYPSMGETLEFPGDSEGEVHCHGFVWPEDATDKYIHLLSQFVQNFDHRDRRGYYG---------------------------------------------NIEGAPMCGCIEEMPVVSEADCTTYDTDPEREGKFTACTKNDLRTRYEEEYPTGELANLVDTCDNAE 1524
PMENPDDGASCSTY+E VEVAKLLDSTCEWD YMCCWTGNDGADGMTANSDVCRVLDYPEEGDSFEMPR+SEG V CHGFAWAEGADVDTHILPLYHYVKNVGRTEE GFY +VEG PECGCIEE+P VS SECSRYSWEGI GCGNNGLLSQYRG LGEP GPMDDNLVR CDNED+PDYD+GSCSHNTYMCC TENDGQGMA+NT DVCRV+DYPS+G LEF GDSE E H HGFVW EDATDKYIHLLSQFVQ FDHRDRRGYYG +IEGAPM GC+EEMPVVSEAD TTYDTDPEREGKFTACT NDL TRY E+YPTGELANLV T DNAE
Sbjct: 19 PMENPDDGASCSTYEEHVEVAKLLDSTCEWDPYMCCWTGNDGADGMTANSDVCRVLDYPEEGDSFEMPRESEGFVCCHGFAWAEGADVDTHILPLYHYVKNVGRTEEAGFYEMKLPDSVEGTPECGCIEEIPSVSCSECSRYSWEGIAGCGNNGLLSQYRGCLGEPCGPMDDNLVRTCDNEDIPDYDHGSCSHNTYMCCLTENDGQGMAENTVRRRVPAVASCVEFSCYSADRKDVGLTMLSVILGHLGATKDVCRVLDYPSVGGALEFAGDSEREAHRHGFVWTEDATDKYIHLLSQFVQKFDHRDRRGYYGKYITVGKAAHNVIMVNGRTTGPGEDNTNNPLSPPPNVSHVILVVTSIEGAPMYGCVEEMPVVSEADGTTYDTDPEREGKFTACTTNDLCTRYAEDYPTGELANLVGTYDNAE 443
BLAST of mRNA_E-siliculosus-1a_M_contig83.16475.1 vs. uniprot
Match: D7FT54_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT54_ECTSI) HSP 1 Score: 538 bits (1386), Expect = 6.140e-181 Identity = 236/336 (70.24%), Postives = 270/336 (80.36%), Query Frame = 1
Query: 511 EGAPMENPDDGASCSTYDEDVEVAKLLDSTCEWDTYMCCWTGNDGADGMTANSDVCRVLDYPEEGDSFEMPRDSEGSVYCHGFAWAEGADVDTHILPLYHYVKNVGRTEEGGFYGNVEGVPECGCIEEMPQVSYSECSRYSWEGIVGCGNNGLLSQYRGRLGEPYGPMDDNLVRACDNEDVPDYDYGSCSHNTYMCCWTENDGQGMADNTDVCRVVDYPSMGETLEFPGDSEGEVHCHGFVWPEDATDKYIHLLSQFVQNFDHRDRRGYYGNIEGAPMCGCIEEMPVVSEADCTTYDTDPEREGKFTACTKNDLRTRYEEEYPTGELANLVDTCDN 1518
EG P+EN DG CSTYDEDV VA LL CEW+TYMCCWTGNDG DGMT+N+DVCRV DYPEEG+S E PRDSEGSVYCHGF WA+GADV+T+ILPLYH V N GRTEEGG+YGNVEG P+CGC+EEMP VS+SECSR+ +GI CG +GL S Y R+ EP GP++DNLVR CDN DVPD+D+ C +TYMCCWTEND +G+ DNTDVCR+ DYPS GETLE+PGDSEG+VHCHG VWPEDATDKYIHLL+Q+VQ FDH +GYYGNIEGAPMCGC E+MP VS+ADCT Y E E + C NDLRTRY+ YP G+L NLV CDN
Sbjct: 82 EGVPLENDGDGEVCSTYDEDVHVAYLLPEMCEWNTYMCCWTGNDGPDGMTSNTDVCRVWDYPEEGNSLEFPRDSEGSVYCHGFGWADGADVNTNILPLYHSVINTGRTEEGGYYGNVEGAPQCGCLEEMPVVSFSECSRFDGDGITDCGEHGLYSNYVSRIDEPNGPLEDNLVRICDNYDVPDFDFRECDSHTYMCCWTENDAKGVLDNTDVCRIHDYPSAGETLEYPGDSEGDVHCHGIVWPEDATDKYIHLLAQYVQTFDHIGNKGYYGNIEGAPMCGCAEDMPEVSKADCTNYSPTEEDEDRIRGCDPNDLRTRYDVLYPDGDLDNLVGRCDN 417
BLAST of mRNA_E-siliculosus-1a_M_contig83.16475.1 vs. uniprot
Match: A0A6H5JT81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT81_9PHAE) HSP 1 Score: 427 bits (1097), Expect = 5.560e-140 Identity = 199/318 (62.58%), Postives = 228/318 (71.70%), Query Frame = 1
Query: 571 VEVAKLLDSTCEWDTYMCCWTGNDGADGMTANSDVCRVLDYPEEGDSFEMPRDSEGSVYCHGFAWAEGADVDTHILPLYHYVKNVGRTEEGGFYGNVEGVPECGCIEEMPQVSYSECSRYSWEGIVGCGNNGLLSQYRGRLGEPYGPMDDNLVRACDNEDVPDYDYGSCSHNTYMCCWTENDGQGMADNTDVCRVVDYPSMGETLEFPGDSEGEVHCHGFVWPEDATDKYIHLLSQFVQNFDHRDRRGYYGNIEGAPMCGCIEEMPVVSEADCTTYDTDPEREGKFTACTKNDLRTRYEEEYPTGELANLVDTCDNAE 1524
V+VA +L TCEW+TYMCCWTG+DG+ GM N+DVCRVL+YPEEGD E+PRD EG VYCHGFAWA+GAD+D+HILPLYHYV NV RT++GG+YGNVEGVP CGCIE+MP VS + CS++ EGI C +N L SQY+ +L EP G M+ NLVR CDNEDVPDYD+ +C+HNTYMCCWTENDGQGMADNTDVCRV+DYPSMGET E+PG SEGEV SEADCTTYD +P REGKFTACTKNDLRTRYEEEYP GEL+NLV CDNAE
Sbjct: 4 VDVATILPETCEWNTYMCCWTGHDGSKGMYGNADVCRVLNYPEEGDVLELPRDDEGPVYCHGFAWADGADIDSHILPLYHYVTNVNRTDDGGYYGNVEGVPSCGCIEDMPVVSDAACSKFGGEGIEPCWDNSLRSQYKYKLDEPKGEMEYNLVRECDNEDVPDYDFRTCNHNTYMCCWTENDGQGMADNTDVCRVIDYPSMGETTEYPGGSEGEV-----------------------------------------------------SEADCTTYDNEPGREGKFTACTKNDLRTRYEEEYPMGELSNLVGECDNAE 268
BLAST of mRNA_E-siliculosus-1a_M_contig83.16475.1 vs. uniprot
Match: D7FT53_ECTSI (Imm downregulated 17 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT53_ECTSI) HSP 1 Score: 270 bits (691), Expect = 1.500e-81 Identity = 125/170 (73.53%), Postives = 140/170 (82.35%), Query Frame = 1
Query: 538 DGASCSTYDEDVEVAKLLDSTCEWDTYMCCWTGNDGADGMTANSDVCRVLDYPEEGDSFEMPRDSEGSVYCHGFAWAEGADVDTHILPLYHYVKNVGRTEE-GGFYGNVEGVPECGCIEEMPQVSYSECSRYSWEGIVGCGNNGLLSQYRGRLGEPYGPMDDNLVRACDN 1044
DG SCSTYDED+EVAKLLD TCEWDTYMCC+T +D +G+TAN+DVC V P EG EMP DSEG VYCHGFAW EGADV+ HILPLYHYVKN+GRTEE GG+YGNVEG PECGCIEEMPQVS++ECSR+S +GI CG GL SQY GRL PYG M+ NLVR+CDN
Sbjct: 17 DGGSCSTYDEDLEVAKLLDGTCEWDTYMCCYTNHDSGEGVTANTDVCSV---PSEG--LEMPGDSEGPVYCHGFAWPEGADVNNHILPLYHYVKNIGRTEEEGGYYGNVEGAPECGCIEEMPQVSFAECSRFSIDGIGECGEGGLYSQYNGRLDAPYGEMEHNLVRSCDN 181
BLAST of mRNA_E-siliculosus-1a_M_contig83.16475.1 vs. uniprot
Match: A0A6H5L9G6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9G6_9PHAE) HSP 1 Score: 259 bits (661), Expect = 2.900e-77 Identity = 117/170 (68.82%), Postives = 136/170 (80.00%), Query Frame = 1
Query: 538 DGASCSTYDEDVEVAKLLDSTCEWDTYMCCWTGNDGADGMTANSDVCRVLDYPEEGDSFEMPRDSEGSVYCHGFAWAEGADVDTHILPLYHYVKNVGRTEE-GGFYGNVEGVPECGCIEEMPQVSYSECSRYSWEGIVGCGNNGLLSQYRGRLGEPYGPMDDNLVRACDN 1044
DG SC+TYDED+EVAKLLD TCEWDTYMCC+T +D +G+TAN+DVC V +EGSVYCHGFAW +GADV+ HILPLYHYVKN+GRTEE GG+YG+VEG PECGCIEEMPQVS++ECSR+ +GIVGCG GL SQY GRLG PYG M+ NLVR+CDN
Sbjct: 24 DGGSCTTYDEDLEVAKLLDDTCEWDTYMCCFTNHDSGEGVTANTDVCSVP--------------NEGSVYCHGFAWPDGADVNNHILPLYHYVKNIGRTEEEGGYYGSVEGAPECGCIEEMPQVSFAECSRFDIDGIVGCGEGGLYSQYNGRLGAPYGEMEHNLVRSCDN 179
BLAST of mRNA_E-siliculosus-1a_M_contig83.16475.1 vs. uniprot
Match: D7G8D2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8D2_ECTSI) HSP 1 Score: 167 bits (422), Expect = 1.480e-43 Identity = 82/157 (52.23%), Postives = 100/157 (63.69%), Query Frame = 1
Query: 1051 VPDYDYGSCSHNTYMCCWTENDGQGMADNTDVCRVVDYPSMGETLEFPGDSEGEVHCHGFVWPEDATDKYIHLLSQFVQNFDHRDRRGYYGNIEGAPMCGCIEEMPVVSEADCTTYDTDPEREGKFTACTKNDLRTRYEEEYPTGELANL-VDTCDN 1518
V ++D+ C +NT+MCCW +G + DNTDVC GE EFPGDSEG VHCHGFVWPE+A+D +I L+ V +H D + Y GNI GAP+C C+EEMP VS ADCT Y F AC+KNDLR Y+E YPTG +L V CDN
Sbjct: 51 VKNFDFNQCDYNTWMCCWDGRNGLAVKDNTDVCSY-----RGE--EFPGDSEGPVHCHGFVWPENASDDFIKYLALDVAFINHVDEKAYTGNIPGAPVCHCLEEMPEVSRADCTQYRKANLAGSDFMACSKNDLRRAYKELYPTGRGRDLLVKKCDN 200
BLAST of mRNA_E-siliculosus-1a_M_contig83.16475.1 vs. uniprot
Match: D7G8C5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C5_ECTSI) HSP 1 Score: 167 bits (424), Expect = 5.220e-43 Identity = 83/159 (52.20%), Postives = 101/159 (63.52%), Query Frame = 1
Query: 1045 EDVPDYDYGSCSHNTYMCCWTENDGQGMADNTDVCRVVDYPSMGETLEFPGDSEGEVHCHGFVWPEDATDKYIHLLSQFVQNFDHRDRRGYYGNIEGAPMCGCIEEMPVVSEADCTTYDTDPEREGKFTACTKNDLRTRYEEEYPTGELANL-VDTCDN 1518
E V ++D+ C +NT+MCCW +G + DNTDVC GE EFPGDSEG VHCHGFVWPE+A+D +I L+ V +H D + Y GNI GAP+C C+EEMP VS ADCT Y F AC+KNDLR Y+E YPTG +L V CDN
Sbjct: 113 ERVKNFDFNQCDYNTWMCCWDGRNGLAVKDNTDVCSY-----RGE--EFPGDSEGPVHCHGFVWPENASDDFIKYLALDVAFINHVDEKAYTGNIPGAPVCHCLEEMPEVSRADCTQYRKANLAGSDFMACSKNDLRRAYKELYPTGRGRDLLVKKCDN 264 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig83.16475.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig83.16475.1 >prot_E-siliculosus-1a_M_contig83.16475.1 ID=prot_E-siliculosus-1a_M_contig83.16475.1|Name=mRNA_E-siliculosus-1a_M_contig83.16475.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=475bp MKFLSMTAGPLLLALAVSAGRGRRGNDDSNDAPSPTPTYSSDSSSDSSSDback to top mRNA from alignment at E-siliculosus-1a_M_contig83:314056..321442- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig83.16475.1 ID=mRNA_E-siliculosus-1a_M_contig83.16475.1|Name=mRNA_E-siliculosus-1a_M_contig83.16475.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=7387bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig83:314056..321442- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig83:314056..321442- >mRNA_E-siliculosus-1a_M_contig83.16475.1 ID=mRNA_E-siliculosus-1a_M_contig83.16475.1|Name=mRNA_E-siliculosus-1a_M_contig83.16475.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2850bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig83:314056..321442- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |