mRNA_E-siliculosus-1a_M_contig83.16473.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig83.16473.1 vs. uniprot
Match: D7FT57_ECTSI (ARL8, ARF-like Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT57_ECTSI) HSP 1 Score: 352 bits (904), Expect = 1.220e-120 Identity = 177/178 (99.44%), Postives = 178/178 (100.00%), Query Frame = 3
Query: 390 MGAAFQRMLSAFYTRQLEVVLVGLENSGKTTLMNVLASGHPVDTVPTIGLNVKMIKRGGVQMKCWDIGGQAQYRGEWGRYTRGCDVIVYVVDAHAEEKAALARRELHRLLEDEELASTPLLVLANKVDLEPHMSEDQVIRELNLDYVTANPWILIPISALKVINIDQVLQWLVKQSRG 923
MGAAFQRMLSAFYTRQLEVVLVGLENSGKTTLMNVLASGHPVDTVPTIGLNVKMIKRGGVQMKCWDIGGQAQYRGEWGRYTRGCDVIVYVVDAHAEEKAALARRELHRLLEDEELASTPLLVLANKVDLEPHMSEDQ+IRELNLDYVTANPWILIPISALKVINIDQVLQWLVKQSRG
Sbjct: 1 MGAAFQRMLSAFYTRQLEVVLVGLENSGKTTLMNVLASGHPVDTVPTIGLNVKMIKRGGVQMKCWDIGGQAQYRGEWGRYTRGCDVIVYVVDAHAEEKAALARRELHRLLEDEELASTPLLVLANKVDLEPHMSEDQIIRELNLDYVTANPWILIPISALKVINIDQVLQWLVKQSRG 178
BLAST of mRNA_E-siliculosus-1a_M_contig83.16473.1 vs. uniprot
Match: F0WPJ3_9STRA (AlNc14C187G8338 protein n=34 Tax=Oomycota TaxID=4762 RepID=F0WPJ3_9STRA) HSP 1 Score: 290 bits (743), Expect = 1.170e-95 Identity = 136/177 (76.84%), Postives = 163/177 (92.09%), Query Frame = 3
Query: 387 IMGAAFQRMLSAFYTRQLEVVLVGLENSGKTTLMNVLASGHPVDTVPTIGLNVKMIKRGGVQMKCWDIGGQAQYRGEWGRYTRGCDVIVYVVDAHAEEKAALARRELHRLLEDEELASTPLLVLANKVDLEPHMSEDQVIRELNLDYVTANPWILIPISALKVINIDQVLQWLVKQS 917
IMGA Q+ML AFYT++LEVVLVGLENSGKTTL+NV+A GHPV+T PTIGLNVK++K+GGVQMKCWDIGGQAQYR EWGRYTRGCDVI+YVVDA+A ++ +LAR+ELHRLLED ELA+TPLLVLANK+DLEPH+ E ++IRELNLDYV NPW++IP SAL+++NIDQV+QWL+KQS
Sbjct: 33 IMGAILQKMLQAFYTKKLEVVLVGLENSGKTTLLNVMAMGHPVETCPTIGLNVKLVKKGGVQMKCWDIGGQAQYRSEWGRYTRGCDVIIYVVDANAFDQISLARKELHRLLEDRELATTPLLVLANKIDLEPHICEPELIRELNLDYVVDNPWLMIPCSALRLVNIDQVIQWLMKQS 209
BLAST of mRNA_E-siliculosus-1a_M_contig83.16473.1 vs. uniprot
Match: F0YA37_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YA37_AURAN) HSP 1 Score: 286 bits (731), Expect = 2.590e-94 Identity = 134/175 (76.57%), Postives = 159/175 (90.86%), Query Frame = 3
Query: 390 MGAAFQRMLSAFYTRQLEVVLVGLENSGKTTLMNVLASGHPVDTVPTIGLNVKMIKRGGVQMKCWDIGGQAQYRGEWGRYTRGCDVIVYVVDAHAEEKAALARRELHRLLEDEELASTPLLVLANKVDLEPHMSEDQVIRELNLDYVTANPWILIPISALKVINIDQVLQWLVKQ 914
MGA F ++L AFY ++LEVVLVGLENSGKTTL+NVLA+G PV+T PTIGLNVK++++GGVQMKCWDIGGQAQYR EWGRYTRGCDVI+YVVDA+A + LAR+ELHRLLED ELA+TPLLV+ANK+DL+PH+SE +IRELNLDY+T NPWI+IP+SALKVINIDQVL WL+KQ
Sbjct: 1 MGAIFTKLLDAFYNKKLEVVLVGLENSGKTTLLNVLAAGRPVETCPTIGLNVKLVRKGGVQMKCWDIGGQAQYRSEWGRYTRGCDVIIYVVDANALDSIPLARKELHRLLEDRELATTPLLVIANKIDLDPHISEPDLIRELNLDYITENPWIVIPVSALKVINIDQVLSWLIKQ 175
BLAST of mRNA_E-siliculosus-1a_M_contig83.16473.1 vs. uniprot
Match: A0A7S2C4S7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C4S7_9STRA) HSP 1 Score: 284 bits (727), Expect = 9.780e-94 Identity = 135/177 (76.27%), Postives = 158/177 (89.27%), Query Frame = 3
Query: 390 MGAAFQRMLSAFYTRQLEVVLVGLENSGKTTLMNVLASGHPVDTVPTIGLNVKMIKRGGVQMKCWDIGGQAQYRGEWGRYTRGCDVIVYVVDAHAEEKAALARRELHRLLEDEELASTPLLVLANKVDLEPHMSEDQVIRELNLDYVTANPWILIPISALKVINIDQVLQWLVKQSR 920
MG QRM AFYT++LEVVLVG+ENSGKTTL++VLA+G PV+T PTIGLNVK++++GGVQMKCWDIGGQAQYR EWGRYTRGCDVI+YVVDAHA + LAR+ELHRLLED ELA+TPLLVLANKVDLEPH+SE ++I ELNLDY+ NPWI+IPISALKV NIDQV+QWL+KQ +
Sbjct: 1 MGQLLQRMFDAFYTKKLEVVLVGIENSGKTTLLSVLANGAPVETCPTIGLNVKLVRKGGVQMKCWDIGGQAQYRSEWGRYTRGCDVIIYVVDAHAFDTIPLARKELHRLLEDRELATTPLLVLANKVDLEPHISEPELITELNLDYIVDNPWIVIPISALKVTNIDQVIQWLIKQGK 177
BLAST of mRNA_E-siliculosus-1a_M_contig83.16473.1 vs. uniprot
Match: A0A8J2SSV8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SSV8_9STRA) HSP 1 Score: 281 bits (719), Expect = 1.840e-92 Identity = 130/178 (73.03%), Postives = 158/178 (88.76%), Query Frame = 3
Query: 390 MGAAFQRMLSAFYTRQLEVVLVGLENSGKTTLMNVLASGHPVDTVPTIGLNVKMIKRGGVQMKCWDIGGQAQYRGEWGRYTRGCDVIVYVVDAHAEEKAALARRELHRLLEDEELASTPLLVLANKVDLEPHMSEDQVIRELNLDYVTANPWILIPISALKVINIDQVLQWLVKQSRG 923
MGA ++L FY ++LEVVLVGLENSGKTTL+NVLA+G PV+T PTIGLNVK++++GGVQMKCWDIGGQAQYR EWGRYTRGCDVI++VVD+HA E LAR+ELHRLLED ELA+TP+LV++NK+DLEPH++E +IR+LNLDYVT NPWI+IPISALKV+N+DQVLQWL+KQ
Sbjct: 1 MGAFLTKLLDTFYAKKLEVVLVGLENSGKTTLLNVLAAGRPVETCPTIGLNVKLVRKGGVQMKCWDIGGQAQYRSEWGRYTRGCDVIIFVVDSHAIESIPLARKELHRLLEDRELATTPVLVVSNKIDLEPHVTEGDLIRDLNLDYVTENPWIVIPISALKVVNVDQVLQWLIKQGNS 178
BLAST of mRNA_E-siliculosus-1a_M_contig83.16473.1 vs. uniprot
Match: A0A485LCR6_9STRA (Aste57867_19416 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LCR6_9STRA) HSP 1 Score: 282 bits (722), Expect = 3.550e-92 Identity = 137/204 (67.16%), Postives = 168/204 (82.35%), Query Frame = 3
Query: 360 TRRERLHQSIMGAAFQRMLSAFYTRQLEVVLVGLEN------------------SGKTTLMNVLASGHPVDTVPTIGLNVKMIKRGGVQMKCWDIGGQAQYRGEWGRYTRGCDVIVYVVDAHAEEKAALARRELHRLLEDEELASTPLLVLANKVDLEPHMSEDQVIRELNLDYVTANPWILIPISALKVINIDQVLQWLVKQS 917
+R + + IMG QRML AFYT++LEVVLVGLEN +GKTTL+NV+A GHPV+T PTIGLNVK++K+GGVQMKCWDIGGQAQYR EWGRYTRGCDVI+YVVDA+A ++ +LAR+ELHRLLED ELA+TPLLVLANK+DLEPH+SE ++IRELNLDY+ NPW++IPISAL+++NIDQV+QWL+KQS
Sbjct: 26 SREKASQRRIMGGILQRMLQAFYTKKLEVVLVGLENRYGVLADYAPVEERHLDDAGKTTLLNVMAMGHPVETCPTIGLNVKLVKKGGVQMKCWDIGGQAQYRSEWGRYTRGCDVIIYVVDANAFDQISLARKELHRLLEDRELATTPLLVLANKIDLEPHISEPELIRELNLDYIVDNPWLVIPISALRLVNIDQVIQWLMKQS 229
BLAST of mRNA_E-siliculosus-1a_M_contig83.16473.1 vs. uniprot
Match: A0A0P1AND5_PLAHL (Adp-ribosylation factor family n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AND5_PLAHL) HSP 1 Score: 290 bits (743), Expect = 7.780e-92 Identity = 135/176 (76.70%), Postives = 163/176 (92.61%), Query Frame = 3
Query: 390 MGAAFQRMLSAFYTRQLEVVLVGLENSGKTTLMNVLASGHPVDTVPTIGLNVKMIKRGGVQMKCWDIGGQAQYRGEWGRYTRGCDVIVYVVDAHAEEKAALARRELHRLLEDEELASTPLLVLANKVDLEPHMSEDQVIRELNLDYVTANPWILIPISALKVINIDQVLQWLVKQS 917
MG Q+ML AFYT++LEVVLVGLENSGKTTL+NV+A GHPV+T PTIGLNVK++K+GGVQMKCWDIGGQAQYR EWGRYTRGCDVI+YVVDA+A ++ +LAR+ELHRLLED ELA+TPLLVLANK+DLEPH+SE ++IRELNLDY+ NPW++IPISAL+++NIDQV+QWL+KQS
Sbjct: 1 MGGILQKMLQAFYTKKLEVVLVGLENSGKTTLLNVMAMGHPVETCPTIGLNVKLVKKGGVQMKCWDIGGQAQYRSEWGRYTRGCDVIIYVVDANAFDQISLARKELHRLLEDRELATTPLLVLANKIDLEPHISEPELIRELNLDYIVDNPWLVIPISALRLVNIDQVIQWLMKQS 176
BLAST of mRNA_E-siliculosus-1a_M_contig83.16473.1 vs. uniprot
Match: A0A7S2RSV3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSV3_9STRA) HSP 1 Score: 279 bits (714), Expect = 8.880e-92 Identity = 129/177 (72.88%), Postives = 161/177 (90.96%), Query Frame = 3
Query: 390 MGAAFQRMLSAFYTRQLEVVLVGLENSGKTTLMNVLASGHPVDTVPTIGLNVKMIKRGGVQMKCWDIGGQAQYRGEWGRYTRGCDVIVYVVDAHAEEKAALARRELHRLLEDEELASTPLLVLANKVDLEPHMSEDQVIRELNLDYVTANPWILIPISALKVINIDQVLQWLVKQSR 920
MGA QRML +FYT++LEVVL+GLENSGKTTL+NVLA G P++TVPTIGLNVK++K+GG+QM CWD+GGQ QYR EWGRYTRGCDVI++VVDAHA +K A++ELHRLLED++LA+TP+LVLANK+DL+PH+SE ++IRELNLDY+ NPW++IPISAL+V NIDQV+QWLVKQS+
Sbjct: 1 MGALLQRMLDSFYTKKLEVVLIGLENSGKTTLLNVLAHGAPMETVPTIGLNVKLVKQGGIQMHCWDLGGQEQYRTEWGRYTRGCDVILFVVDAHAMDKLPSAKKELHRLLEDQQLATTPILVLANKIDLDPHVSEAELIRELNLDYIVDNPWVVIPISALQVTNIDQVVQWLVKQSK 177
BLAST of mRNA_E-siliculosus-1a_M_contig83.16473.1 vs. uniprot
Match: A0A2D4CIT1_PYTIN (Arf/Sar family, other n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CIT1_PYTIN) HSP 1 Score: 275 bits (702), Expect = 6.670e-86 Identity = 128/167 (76.65%), Postives = 154/167 (92.22%), Query Frame = 3
Query: 390 MGAAFQRMLSAFYTRQLEVVLVGLENSGKTTLMNVLASGHPVDTVPTIGLNVKMIKRGGVQMKCWDIGGQAQYRGEWGRYTRGCDVIVYVVDAHAEEKAALARRELHRLLEDEELASTPLLVLANKVDLEPHMSEDQVIRELNLDYVTANPWILIPISALKVINIDQ 890
MG Q+ML AFYT++LEVVLVGLENSGKTTL+NV+A GHPV+T PTIGLNVK++K+GGVQMKCWDIGGQAQYR EWGRYTRGCDVI+YVVDA+A ++ +LAR+ELHRLLED ELA+TPLLVLANK+DLEPH+SE ++IRELNLDY+ NPW++IPISAL+++NIDQ
Sbjct: 1 MGGILQKMLQAFYTKKLEVVLVGLENSGKTTLLNVMAMGHPVETCPTIGLNVKLVKKGGVQMKCWDIGGQAQYRSEWGRYTRGCDVIIYVVDANAFDQISLARKELHRLLEDRELATTPLLVLANKIDLEPHISEPELIRELNLDYIVDNPWLVIPISALRLVNIDQ 167
BLAST of mRNA_E-siliculosus-1a_M_contig83.16473.1 vs. uniprot
Match: A0A812THX3_SYMMI (Arl8 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812THX3_SYMMI) HSP 1 Score: 258 bits (659), Expect = 2.320e-83 Identity = 121/178 (67.98%), Postives = 151/178 (84.83%), Query Frame = 3
Query: 390 MGAAFQRMLSAFYTRQLEVVLVGLENSGKTTLMNVLASGHPVDTVPTIGLNVKMIKRGGVQMKCWDIGGQAQYRGEWGRYTRGCDVIVYVVDAHAEEKAALARRELHRLLEDEELASTPLLVLANKVDLEPHMSEDQVIRELNLDYVTANPWILIPISALKVINIDQVLQWLVKQSRG 923
MG FQR+L+ +T++LEVVLVGLENSGKTTL+ VL+ G P +T PTIGLNVKM+KRGGVQMKCWD+GGQ+ YR EWGRYTRGC+VI++VVDAHA + + ELHRLLED EL++TPLLV+ANK+DLEPH +E Q+I+ELNLDY+ NPWI+IP SALK NID+V+QWL++Q+ G
Sbjct: 1 MGNVFQRLLNMLFTKKLEVVLVGLENSGKTTLLQVLSDGSPTETAPTIGLNVKMVKRGGVQMKCWDLGGQSIYRAEWGRYTRGCNVIIFVVDAHAMDILPDVKIELHRLLEDRELSTTPLLVVANKIDLEPHATEPQLIKELNLDYIVDNPWIIIPCSALKNTNIDEVVQWLLRQADG 178 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig83.16473.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig83.16473.1 >prot_E-siliculosus-1a_M_contig83.16473.1 ID=prot_E-siliculosus-1a_M_contig83.16473.1|Name=mRNA_E-siliculosus-1a_M_contig83.16473.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=179bp MGAAFQRMLSAFYTRQLEVVLVGLENSGKTTLMNVLASGHPVDTVPTIGLback to top mRNA from alignment at E-siliculosus-1a_M_contig83:289391..292653- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig83.16473.1 ID=mRNA_E-siliculosus-1a_M_contig83.16473.1|Name=mRNA_E-siliculosus-1a_M_contig83.16473.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=3263bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig83:289391..292653- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig83:289391..292653- >mRNA_E-siliculosus-1a_M_contig83.16473.1 ID=mRNA_E-siliculosus-1a_M_contig83.16473.1|Name=mRNA_E-siliculosus-1a_M_contig83.16473.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1074bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig83:289391..292653- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |