mRNA_E-siliculosus-1a_M_contig83.16456.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig83.16456.1 vs. uniprot
Match: D7G3Q1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q1_ECTSI) HSP 1 Score: 1727 bits (4473), Expect = 0.000e+0 Identity = 1139/1358 (83.87%), Postives = 1160/1358 (85.42%), Query Frame = 1
Query: 1 MIPDEAIKRLRSLEHLDESPFLQRKSFRSAAGXXXXXXXXXXXXXXXXXXXXRPAANTAAANTAGPETAEIGLGRRPRELPWLVTPAPSANQAVTTSNVXXXXXXXXXXXXXXXXGSSRSGSTESTAGSGCGGRQKRQQPRGRGSHAELPGSGGCSEPGDASLSPSGRGWDKRTKGQNQKRGQKEEQDDSATEAAAARASDAEWARRQRCQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALALPFGLAPGSIGEDSPSSGGRXXXXXANGRGGLRRGQGMVVVFADRLSVLLESNSAVPLEELQAGLLELRPFRFGIRFSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTRVDATGDSRQRASKPAGGDPAAENGAASRAGRSQKKRAGRGEEEVSVSAQRGGRPQNSPAVRSSARAGAPQPASRSRVDLSSSGRHRHPGGREKPRSNPTIADKNNGWVRSRSFSRGGGRQGRSGTPTTPRTAAGCWVPPPTRWGGTPIRSPLLWGEAEGSTAAAHTGGGKEGDGCVDTGYDRRSRGLPLGFHDGGEVEWGGKEEGMDDEGRGFEIKDAEFFRTADGRSLFAESLSGTGGEAERVRHAIQWGEDGDSDDQGSHRRRGFLCLLGEEGRRASERGSPDGRRLGVAARRRRARIDTRSRDGKRRAEMMSAREKIKRLEEECISRRTDKLEGRANLAKSRGEASAAEDRERTLLGVVALVSSAVDMQQLLERTKKRRAAHRDYLLLVSSALRVQRAWREYRRPPPVVDTDGDALLMQGFIRSIMRISTKYIIRKRARVLALLKLWPEGEAAIKLELRTGKRIRGEGSWRATCLRRSSRTESTSTMVPHGSVCGXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------ANVLPAPWFPRLVKQMEIRKNETAQNLMRGQEKVKGVADASAPVGRAPGRSGTPLVCFQRLFLRPFYRHLFRHRQTTEAAWISNNPIGQAYQHGNHQQHLHQQQQLQHHAGHSDEGGRLARSDSDSIGGGSVASIRTDATDXXXXXXXXXXXXXXXTARKTFDDPADSTGRNAHRTRHEQSRLKHPHSAEHSDDNDTQEGSLSSSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXQRTSSNNDAKNGLGAIFDDXXXXXXXXKGKTRATGGPQFSRTTPAASSSGQGTRVFSTTGSMHHRPPRNKNTVAARDMTSLQLLGGGGWPARLAEMDKEIDAASLVPLPVKLSTIESFIRAEILRRAKLTSRDRASRRSPPEQATVATAKALLHGSIEDFFNQAEAALCSKNIDMLQLYSGEARSRFMAEVDKRVRGYMEKGSRRSPAALHS-----TYEL 4035
MIPDEAIKRLRSLEHLDESPFLQRKSFRSAAG RPAA AANTAGPET EIGLGRRPRELPWLVTPAPSANQA+TTSNV XXXXXXXXXXXXXXXGSSRS STESTAGSGCGG+QKRQQPRGRGSHAELPGSGGCSEPGDA LSPSGRGWDK KGQNQKRGQKEEQDDSATEA ASD EWARR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FGL PGSIGEDSP SGGR ANGRGGLRRGQGMVVVFADRLS +LESNSAVPLEELQA LLELRPFRFGI SSS XXXXXXXXXXXXXXXX XXXXXXXXXX TGD RQRASKPAGG+ GAASRAGRSQKK GRGEEEVSVSAQRGG P NSPA RSSARAGAPQPAS SRVDLSS+GR RHP GREKPRSNPT ADKNNGWVRSRSFSRGGGR+GRSGTPTTPRTA GCW PPPTRWGGTPIRSPL WG + AAH GGGKEGDGC DTGYDRRSRG PL FH+GGE+E GGKEEGM+ GRGFE KDAEFFRTA+GRSLFAESLSGTGG+AERV HAIQWGEDGDSDDQG HRRRGFLCLLGEEGRRASERGSPDGRRLGVAARRRRARID RSRDGKRRAEMM AREKIKRLEEECISRRTDKLEGRANLAKSRGEASAAEDRERTLL VVALVS+AVDM++LLERTKKRRAAHRDYLLLVSSALRVQRAWREYRRPPPVVDTDGDA LMQGFIRSIMRISTKYI+RKRARVLALLKLWPEGEAAIKLELRTGKRIRGEGSWRATCLRR SRTEST+T+VPHGSVCGXXXXXXXXXXXXXXXXXXXXXXXXXXXX ANVLPAPWFPRLVKQMEIRKNETAQNLMRGQEKVKGVADAS P GRAPGRSGTPLVCFQRLF PF HRQTTEAAWISNNPIGQAYQHGNHQQHL QQQQL HHAGHSDEGGRLA SDSDSIGGGSVASIRTDA XXXXXXXXXX FDDPADSTGR XXXXXXXXXXXXXXXXXXXXXXXXXXXQRTS NNDAKNGLGAIFDDXXXXXXX +GKTRATGGPQ SRTTPAAS SGQGTRVFS TG MHHR PRNKNTVAARDMTSLQLLGGGGWPARLAEMD+EIDAA LVPLPVKLSTIESFIR EILRRAKLTSRDRASRRSPPEQATVATAKALLHGSIEDF NQAEA LCSKNIDMLQLYSGEARSRFMAEVDKRVRGYMEKG+RRSPAALHS TYEL
Sbjct: 1 MIPDEAIKRLRSLEHLDESPFLQRKSFRSAAGGACSRRRITGSNNDPANSKKRPAATITAANTAGPETVEIGLGRRPRELPWLVTPAPSANQAITTSNVAXXXXXXXXXXXXXXXGSSRSRSTESTAGSGCGGQQKRQQPRGRGSHAELPGSGGCSEPGDAYLSPSGRGWDKSAKGQNQKRGQKEEQDDSATEAXXXXASDTEWARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGLGPGSIGEDSPFSGGRGAGGGANGRGGLRRGQGMVVVFADRLSAVLESNSAVPLEELQAELLELRPFRFGIPSSSSSXXXXXXXXXXXXXXXXLSDLEDGDGRGDGXXXXXXXXXX---XXXTGDIRQRASKPAGGNXXXXXGAASRAGRSQKKMTGRGEEEVSVSAQRGGGPTNSPAARSSARAGAPQPASGSRVDLSSAGRRRHPVGREKPRSNPTTADKNNGWVRSRSFSRGGGRRGRSGTPTTPRTAVGCWAPPPTRWGGTPIRSPLFWGGGGEGSTAAHMGGGKEGDGCADTGYDRRSRGFPLDFHNGGELERGGKEEGMNAGGRGFEFKDAEFFRTANGRSLFAESLSGTGGKAERVCHAIQWGEDGDSDDQGRHRRRGFLCLLGEEGRRASERGSPDGRRLGVAARRRRARIDARSRDGKRRAEMMFAREKIKRLEEECISRRTDKLEGRANLAKSRGEASAAEDRERTLLWVVALVSTAVDMKRLLERTKKRRAAHRDYLLLVSSALRVQRAWREYRRPPPVVDTDGDARLMQGFIRSIMRISTKYIVRKRARVLALLKLWPEGEAAIKLELRTGKRIRGEGSWRATCLRRGSRTESTATIVPHGSVCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANVLPAPWFPRLVKQMEIRKNETAQNLMRGQEKVKGVADASPPGGRAPGRSGTPLVCFQRLFYDPF---TVTHRQTTEAAWISNNPIGQAYQHGNHQQHLRQQQQLHHHAGHSDEGGRLAGSDSDSIGGGSVASIRTDAX------XXXXXXXXXXXXXXXFDDPADSTGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRTSRNNDAKNGLGAIFDDXXXXXXX-EGKTRATGGPQLSRTTPAASCSGQGTRVFSATGGMHHRQPRNKNTVAARDMTSLQLLGGGGWPARLAEMDREIDAAPLVPLPVKLSTIESFIRTEILRRAKLTSRDRASRRSPPEQATVATAKALLHGSIEDFLNQAEATLCSKNIDMLQLYSGEARSRFMAEVDKRVRGYMEKGNRRSPAALHSHANSVTYEL 1345
BLAST of mRNA_E-siliculosus-1a_M_contig83.16456.1 vs. uniprot
Match: A0A6H5KEU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEU3_9PHAE) HSP 1 Score: 1684 bits (4361), Expect = 0.000e+0 Identity = 1118/1370 (81.61%), Postives = 1153/1370 (84.16%), Query Frame = 1
Query: 157 RPAANTAAANTAGPETAEIGLGRRPRELPWLVTPAPSANQAVTTSNVXXXXXXXXXXXXXXXXGSSRSGSTESTAGSGCGGRQKRQQPRGRGSHAELPGSGGCSEPGDASLSPSGRGWDKRTKGQNQKRGQKEEQDDSATEAAAARASDAEWARRQRCQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALALPFGLAPGSIGEDSPSSGGRXXXXXANGRGGLRRGQGMVVVFADRLSVLLESNSAVPLEELQAGLLELRPFRFGIRFSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTRVDATGDSRQRASKPAGGDPAAENGAASRAGRSQKKRAGRGEEEVSVSAQRGGRPQNSPAVRSSARAGAPQPASRSRVDLSSSGRHRHPGGREKPRSNPTIADKNNGWVRSRSFSRGGGRQGRSGTPTTPRTAAGCWVPPPTRWGGTPIRSPLLWGEAEGSTAAAHTGGGKEGDGCVDTGYDRRSRGLPLGFHDGGEVEWGGKEEGMDDEGRGFEIKDAEFFRTADGRSLFAESLSGTGGEAERVRHAIQWGEDGDSDDQGSHRRRGFLCLLGEEGRRASERGSPDGRRLGVAARRRRARIDTRSRDGKRRAEMMSAREKIKRLEEE-----------------------------------------------------------CISRRTDKLEGRANLAKSRGEASAAEDRERTLLGVVALVSSAVDMQQLLERTKKRRAAHRDYLLLVSSALRVQRAWREYRRPPPVVDTDGDALLMQGFIRSIMRISTKYIIRKRARVLALLKLWPEGEAAIKLELRTGKRIRGEGSWRATCLRRSSRTESTSTMVPHGSVCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXANVLPAPWFPRLVKQMEIRKNETAQNLMRGQEKVKGVADASAPVGRAPGRSGTPLVCFQRLFLRPFYRHLFRHRQTTEAAWISNNPIGQAYQHGNHQQHLHQQQQLQHHAGHSDEGGRLARSDSDSIGGGSVASIRTDATDXXXXXXXXXXXXXXXTARKTFDDPADSTGRNAHRTRHEQSRLKHPHSAEHSDDNDTQEGSLSSSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXQRTSSNNDAKNGLGAIFDDXXXXXXXXKGKTRATGGPQFSRTTPAASSSGQGTRVFSTTGSMHHRPPRNKNTVAARDMTSLQLLGGGGWPARLAEMDKEIDAASLVPLPVKLSTIESFIRAEILRRAKLTSRDRASRRSPPEQATVATAKALLHGSIEDFFNQAEAALCSKNIDMLQ--------------LYSGEARSRFMAEVDKRVRGYMEKGSRRSPAALHS----TYEL 4035
RPAANTAAANTAGPETAEIGLGRRPRELPWLVTPAPSANQAVTTSNV GSSRSGSTESTAGSGCGGRQK PRGRG HAELPGSGGCSEPGDASLSPSGR WDK T G+ QKR QKEEQDD A+EA+AA ASDAEWARRQRCQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXX GL PGSIG+DSPSS XXXXXANGRGGLRRGQGMVVVFADRLS +LESNSAVPLEELQAGLLELRPFRFGI FSSS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GT VDATGDSRQRASKPAGGDP A+ GAA RAGRSQKKR G GEE+V VSAQR G P SPA R+SARAGAP PA SRVD SS+GRHRHP GREKPRSNPT A+KNNGWVRSRSFSRGG R+GRSGT TTP TAAGCWVPPPTRWGGTPI+SPL G EGSTAA H GGGKEGDGCVDTG+DRRSRGLPL FH+GGE+EW G EEGMD EGRGFEI DAEFFRT DG+SLFAESLSGTGG+ ERV HAIQWGEDGD DDQG HRRRGF CLLGEEG ASERGSPDGRRLGVAARRRRARIDT+SRDGKRRAEMM ARE IKRLEEE CISRRTDKL+GRANLAKSRGEASAAEDRERTLLG+VALV +AVD++QLLERTKKRRAA RD LLLVSSALRVQRAWREYRRPPPVVDTDGDA GFIRSIMRISTKYIIRKRARVLALLKLWPEGEAAIKLELRTGKRIRGEGSWRATCLRRSSRTESTS MVPHGSV GXXXXXXXXXXXXXXXXXXXXXXXXXX AN+LPAPWFPRLVKQMEIRKNETAQNLMRGQEKVKGVADA APVGRAPGRSGTPLVCFQRLFLRPF+RH TTEAAWISNNPIGQAY+HGNHQQHL QQQQLQHHAG SDEG RLARSDSDS GGGSVAS+RT+A XXXXXXXXXX RKTFDDPADSTGRN HR++ EQSR KH HSAEHSDDN TQEGSLS XXXXXXXXXXXXXXXXXXXXXXXXXXXQRTS NNDAKNGLGAIFDDXXXXXXX +GKTRATGGPQFSRTTPAASSSGQGTRVFS TGSMHHR PRNKNTVAARDMTSLQLLGGGGW ARLAEMDKEIDAASLVPLPVKLSTIESF+RAEILRR KLTSRD+ASRR+ PEQATVATAKALLHGSIEDFFNQAEAALCSKNIDMLQ LYSGEAR RFMAEVDKRVRGYMEKGSRRSPAALH+ YEL
Sbjct: 39 RPAANTAAANTAGPETAEIGLGRRPRELPWLVTPAPSANQAVTTSNVAAAAGADGRSGADARRGSSRSGSTESTAGSGCGGRQKXXXPRGRGRHAELPGSGGCSEPGDASLSPSGRNWDKSTNGRLQKRWQKEEQDDRASEASAATASDAEWARRQRCQALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGPGSIGDDSPSSXXXXXXXXANGRGGLRRGQGMVVVFADRLSAVLESNSAVPLEELQAGLLELRPFRFGIPFSSSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGRG-GTWVDATGDSRQRASKPAGGDPVAKKGAARRAGRSQKKRTGLGEEKVPVSAQRRGGPTTSPAARASARAGAPPPAGGSRVDFSSAGRHRHPVGREKPRSNPTTANKNNGWVRSRSFSRGGARRGRSGTQTTPHTAAGCWVPPPTRWGGTPIKSPLFLGGGEGSTAA-HMGGGKEGDGCVDTGHDRRSRGLPLDFHNGGELEWVGGEEGMDAEGRGFEIIDAEFFRTVDGQSLFAESLSGTGGKTERVCHAIQWGEDGDRDDQGHHRRRGFFCLLGEEGHLASERGSPDGRRLGVAARRRRARIDTKSRDGKRRAEMMFARETIKRLEEEVIKYSQALKNPTTPADNPCGRLSFHSPEALEKSRQHPRHTVLAVCPTSLLPPSLPSIPQCISRRTDKLKGRANLAKSRGEASAAEDRERTLLGIVALVCTAVDIKQLLERTKKRRAADRDCLLLVSSALRVQRAWREYRRPPPVVDTDGDA----GFIRSIMRISTKYIIRKRARVLALLKLWPEGEAAIKLELRTGKRIRGEGSWRATCLRRSSRTESTSAMVPHGSVSGXXXXXXXXXXXXXXXXXXXXXXXXXXA-ANILPAPWFPRLVKQMEIRKNETAQNLMRGQEKVKGVADAPAPVGRAPGRSGTPLVCFQRLFLRPFFRH------TTEAAWISNNPIGQAYKHGNHQQHLRQQQQLQHHAGDSDEGRRLARSDSDSTGGGSVASVRTNAX------XXXXXXXXXXXXRKTFDDPADSTGRNPHRSQQEQSRRKHSHSAEHSDDNXTQEGSLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRTSRNNDAKNGLGAIFDDXXXXXXX-EGKTRATGGPQFSRTTPAASSSGQGTRVFSATGSMHHRQPRNKNTVAARDMTSLQLLGGGGWLARLAEMDKEIDAASLVPLPVKLSTIESFMRAEILRRVKLTSRDQASRRTLPEQATVATAKALLHGSIEDFFNQAEAALCSKNIDMLQFSPFASSPSAVLVQLYSGEARLRFMAEVDKRVRGYMEKGSRRSPAALHAHASVKYEL 1388 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig83.16456.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig83.16456.1 >prot_E-siliculosus-1a_M_contig83.16456.1 ID=prot_E-siliculosus-1a_M_contig83.16456.1|Name=mRNA_E-siliculosus-1a_M_contig83.16456.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1346bp MIPDEAIKRLRSLEHLDESPFLQRKSFRSAAGGACSRRRSTGSNNDPASSback to top mRNA from alignment at E-siliculosus-1a_M_contig83:76746..86409- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig83.16456.1 ID=mRNA_E-siliculosus-1a_M_contig83.16456.1|Name=mRNA_E-siliculosus-1a_M_contig83.16456.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=9664bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig83:76746..86409- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig83:76746..86409- >mRNA_E-siliculosus-1a_M_contig83.16456.1 ID=mRNA_E-siliculosus-1a_M_contig83.16456.1|Name=mRNA_E-siliculosus-1a_M_contig83.16456.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=8076bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig83:76746..86409- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |