mRNA_E-siliculosus-1a_M_contig83.16451.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig83.16451.1 vs. uniprot
Match: A0A6H5KLX0_9PHAE (Glutaredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLX0_9PHAE) HSP 1 Score: 322 bits (825), Expect = 3.720e-105 Identity = 170/179 (94.97%), Postives = 174/179 (97.21%), Query Frame = 1
Query: 1 MNFSLNLVVLALALLAGSASSFVLTPKTAPS-LASTPTSSASCSTTSLRASMDGENLLPNAAEIMDEMAGEAKGVIESLVKENKVMLFMKGNKMFPQCGFSNSAVQVLRACDVEFETYDVLTNPGVREAVKEYSSWPTIPQLYIDGEFTGGADIMIESFQSGELKKTLEDAGCTFVPSE 534
MNF++NLVVLA ALLAGSASSFVLTPKTAPS LAS+PTSSASCS TSLRASMDGENLLPNAAEIMDEMAGEAK VIE LVKENKVMLFMKGNKMFPQCGFSNSAVQVLRACDVEFETYDVLTNPGVREAVKEYSSWPTIPQLY+DGEFTGGADIMIESFQSGELKKTLEDAGCTFVPSE
Sbjct: 1 MNFAVNLVVLAFALLAGSASSFVLTPKTAPSSLASSPTSSASCSKTSLRASMDGENLLPNAAEIMDEMAGEAKDVIERLVKENKVMLFMKGNKMFPQCGFSNSAVQVLRACDVEFETYDVLTNPGVREAVKEYSSWPTIPQLYVDGEFTGGADIMIESFQSGELKKTLEDAGCTFVPSE 179
BLAST of mRNA_E-siliculosus-1a_M_contig83.16451.1 vs. uniprot
Match: D7G8D5_ECTSI (Grx_S14-glutaredoxin subgroup II n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8D5_ECTSI) HSP 1 Score: 187 bits (474), Expect = 7.020e-54 Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 1
Query: 268 GNKMFPQCGFSNSAVQVLRACDVEFETYDVLTNPGVREAVKEYSSWPTIPQLYIDGEFTGGADIMIESFQSGELKKTLEDAGCTFVPSE 534
GNKMFPQCGFSNSAVQVLRACDVEFETYDVLTNPGVREAVKE+SSWPTIPQLYIDGEFTGGADIMIESFQSGELKKTLEDAGCTFVPSE
Sbjct: 17 GNKMFPQCGFSNSAVQVLRACDVEFETYDVLTNPGVREAVKEFSSWPTIPQLYIDGEFTGGADIMIESFQSGELKKTLEDAGCTFVPSE 105
BLAST of mRNA_E-siliculosus-1a_M_contig83.16451.1 vs. uniprot
Match: A0A835Z4Q0_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Q0_9STRA) HSP 1 Score: 184 bits (468), Expect = 3.880e-52 Identity = 86/129 (66.67%), Postives = 108/129 (83.72%), Query Frame = 1
Query: 139 LRASMDGENLLPNAAEIMDEMAGEAKGVIESLVKENKVMLFMKGNKMFPQCGFSNSAVQVLRACDVEFETYDVLTNPGVREAVKEYSSWPTIPQLYIDGEFTGGADIMIESFQSGELKKTLEDAGCTFV 525
L+++ DG+NL P+ AE ++ A EA+ I+S+VKENKVMLFMKGNKMFPQCGFSN+AVQVLRA DV+FET+DVL++P +R+ +KEYS WPTIPQLY+ GEF GG+DI+IE FQ+GELK TLE G FV
Sbjct: 38 LQSTSDGQNLRPDVAEQLELYAAEAQKRIDSMVKENKVMLFMKGNKMFPQCGFSNTAVQVLRASDVKFETFDVLSDPDIRQGIKEYSQWPTIPQLYVGGEFVGGSDILIELFQNGELKTTLESGGAEFV 166
BLAST of mRNA_E-siliculosus-1a_M_contig83.16451.1 vs. uniprot
Match: A0A6V1R5C5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1R5C5_HETAK) HSP 1 Score: 157 bits (396), Expect = 8.890e-42 Identity = 69/116 (59.48%), Postives = 96/116 (82.76%), Query Frame = 1
Query: 160 ENLLPNAAEIMDEMAGEAKGVIESLVKENKVMLFMKGNKMFPQCGFSNSAVQVLRACDVEFETYDVLTNPGVREAVKEYSSWPTIPQLYIDGEFTGGADIMIESFQSGELKKTLED 507
+N + A M+++ +AKG IE++V +NKVMLFMKG K+FPQCGFSN+AVQ+LR+ DVEF+T+DVL++P +R+ +K++S+WPTIPQLY+D EF GG DIMIE F++GELKK E+
Sbjct: 45 DNADSSIAAEMEKIQAQAKGRIENMVNDNKVMLFMKGTKIFPQCGFSNTAVQILRSLDVEFQTFDVLSDPDIRQGIKDFSNWPTIPQLYVDKEFVGGCDIMIELFENGELKKMFEE 160
BLAST of mRNA_E-siliculosus-1a_M_contig83.16451.1 vs. uniprot
Match: A0A4D9CRD6_9STRA (Glutaredoxin n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRD6_9STRA) HSP 1 Score: 148 bits (373), Expect = 4.310e-39 Identity = 69/107 (64.49%), Postives = 88/107 (82.24%), Query Frame = 1
Query: 193 DEMAGEAKGV--IESLVKENKVMLFMKGNKMFPQCGFSNSAVQVLRACDVEFETYDVLTNPGVREAVKEYSSWPTIPQLYIDGEFTGGADIMIESFQSGELKKTLED 507
DE A + + I+SLV NKVMLFMKG+K+FPQCGFSN+AV +LRACD EFET+DVL++ VRE +K YSSWPTIPQ Y++GEF GG+DI++E F+SGEL+KTL +
Sbjct: 5 DEAAERSAAIETIKSLVGNNKVMLFMKGSKLFPQCGFSNTAVSILRACDAEFETFDVLSDYLVREEIKNYSSWPTIPQCYVNGEFVGGSDILLEMFESGELEKTLAE 111
BLAST of mRNA_E-siliculosus-1a_M_contig83.16451.1 vs. uniprot
Match: W7TU87_9STRA (Glutaredoxin-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TU87_9STRA) HSP 1 Score: 148 bits (374), Expect = 1.100e-38 Identity = 70/107 (65.42%), Postives = 88/107 (82.24%), Query Frame = 1
Query: 193 DEMAGEAKGV--IESLVKENKVMLFMKGNKMFPQCGFSNSAVQVLRACDVEFETYDVLTNPGVREAVKEYSSWPTIPQLYIDGEFTGGADIMIESFQSGELKKTLED 507
DE A + V I+SLV NKVMLFMKG+K+FPQCGFSN+AV +LRACD EFET+DVL++ VRE +K YSSWPTIPQ Y++GEF GG+DI++E F+SGEL+KTL +
Sbjct: 46 DEAAERSAAVEKIKSLVGNNKVMLFMKGSKLFPQCGFSNTAVSILRACDAEFETFDVLSDYLVREEIKNYSSWPTIPQCYVNGEFVGGSDILLEMFESGELEKTLAE 152
BLAST of mRNA_E-siliculosus-1a_M_contig83.16451.1 vs. uniprot
Match: A0A7S4C1K1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C1K1_CHRCT) HSP 1 Score: 146 bits (368), Expect = 5.480e-38 Identity = 66/94 (70.21%), Postives = 81/94 (86.17%), Query Frame = 1
Query: 223 IESLVKENKVMLFMKGNKMFPQCGFSNSAVQVLRACDVEFETYDVLTNPGVREAVKEYSSWPTIPQLYIDGEFTGGADIMIESFQSGELKKTLE 504
I+ +V+ NKVMLFMKGNKMFPQCGFSN+AVQ+L A DV +ET+DVL++ +RE VKEYS+WPTIPQ YI+GEF GG DIMIE +QSGEL++ LE
Sbjct: 45 IKEMVESNKVMLFMKGNKMFPQCGFSNTAVQILNAVDVPYETFDVLSDQDIREGVKEYSNWPTIPQCYIEGEFIGGCDIMIEMYQSGELQEMLE 138
BLAST of mRNA_E-siliculosus-1a_M_contig83.16451.1 vs. uniprot
Match: UPI0019DB23B3 (Grx4 family monothiol glutaredoxin n=1 Tax=filamentous cyanobacterium LEGE 11480 TaxID=2777977 RepID=UPI0019DB23B3) HSP 1 Score: 144 bits (364), Expect = 6.750e-38 Identity = 62/104 (59.62%), Postives = 85/104 (81.73%), Query Frame = 1
Query: 199 MAGEAKGVIESLVKENKVMLFMKGNKMFPQCGFSNSAVQVLRACDVEFETYDVLTNPGVREAVKEYSSWPTIPQLYIDGEFTGGADIMIESFQSGELKKTLEDA 510
M E K I+ LVK+NK+M+FMKGNK+ PQCGFSN+ VQ++ V FET+DVL +P VR+ +K+YS+WPTIPQ+Y++GEF GG+DI+IE +QSGEL++T+E A
Sbjct: 1 MTSEVKARIDQLVKDNKIMVFMKGNKLMPQCGFSNNVVQIMNVLGVPFETFDVLADPDVRQGIKDYSNWPTIPQVYLNGEFLGGSDILIEMYQSGELQQTVEVA 104
BLAST of mRNA_E-siliculosus-1a_M_contig83.16451.1 vs. uniprot
Match: A0A7S0EUU3_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EUU3_9EUKA) HSP 1 Score: 143 bits (361), Expect = 4.850e-37 Identity = 64/99 (64.65%), Postives = 80/99 (80.81%), Query Frame = 1
Query: 223 IESLVKENKVMLFMKGNKMFPQCGFSNSAVQVLRACDVEFETYDVLTNPGVREAVKEYSSWPTIPQLYIDGEFTGGADIMIESFQSGELKKTLEDAGCT 519
IE L+ E+KVMLFMKGNKMFPQCGFSN+ VQ+L AC+ FET+DVL + VRE +K +SSWPTIPQ+Y++GEF GG D+MIE +QSGEL + LE A +
Sbjct: 41 IEELIGEHKVMLFMKGNKMFPQCGFSNTVVQILNACETPFETFDVLGDQRVREDIKRFSSWPTIPQVYVEGEFLGGCDVMIEMYQSGELAEILEKANAS 139
BLAST of mRNA_E-siliculosus-1a_M_contig83.16451.1 vs. uniprot
Match: A0A7C3KCM5_9CYAN (Glutaredoxin n=1 Tax=Oscillatoriales cyanobacterium SpSt-418 TaxID=2282169 RepID=A0A7C3KCM5_9CYAN) HSP 1 Score: 142 bits (357), Expect = 6.750e-37 Identity = 63/104 (60.58%), Postives = 84/104 (80.77%), Query Frame = 1
Query: 199 MAGEAKGVIESLVKENKVMLFMKGNKMFPQCGFSNSAVQVLRACDVEFETYDVLTNPGVREAVKEYSSWPTIPQLYIDGEFTGGADIMIESFQSGELKKTLEDA 510
M E + I+SLVK NK+M+FMKGNK+ PQCGFSN+ VQ+L A V F T+DVL +P VR+ +KEYS+WPTIPQ+Y+DG+F GG+DI+IE +QSGEL++ +E A
Sbjct: 1 MKPETQEQIDSLVKSNKIMVFMKGNKLMPQCGFSNNVVQILNALGVPFNTFDVLEDPEVRQGIKEYSNWPTIPQVYVDGQFVGGSDILIELYQSGELQQMVEVA 104 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig83.16451.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig83.16451.1 >prot_E-siliculosus-1a_M_contig83.16451.1 ID=prot_E-siliculosus-1a_M_contig83.16451.1|Name=mRNA_E-siliculosus-1a_M_contig83.16451.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=179bp MNFSLNLVVLALALLAGSASSFVLTPKTAPSLASTPTSSASCSTTSLRASback to top mRNA from alignment at E-siliculosus-1a_M_contig83:44514..49244+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig83.16451.1 ID=mRNA_E-siliculosus-1a_M_contig83.16451.1|Name=mRNA_E-siliculosus-1a_M_contig83.16451.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=4731bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig83:44514..49244+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig83:44514..49244+ >mRNA_E-siliculosus-1a_M_contig83.16451.1 ID=mRNA_E-siliculosus-1a_M_contig83.16451.1|Name=mRNA_E-siliculosus-1a_M_contig83.16451.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1074bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig83:44514..49244+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |