mRNA_E-siliculosus-1a_M_contig82.16445.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig82.16445.1 vs. uniprot
Match: D7G286_ECTSI (Centrin-1, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G286_ECTSI) HSP 1 Score: 2690 bits (6974), Expect = 0.000e+0 Identity = 1632/1972 (82.76%), Postives = 1674/1972 (84.89%), Query Frame = 1
Query: 1 EQHRRRGAERQWARLLDERSRLAAAGVRAEAAEEARIAPKGSAGAHQHAALGARLLAALSSDLKRGGGKSGSSEEEAVPTAEEARATVARLAFQAFDGDGNGVLDVSDLADLLGVLRRIAGRPPSARTAAGSGAAAAGYGLEAAMIAMDEDHSGQVDIDEFMRWFNGYDAHDGATRSTAPGELPQRGSESEEPLYIKVLGVRNGATGGTNAQEEREVNHEEDADDGGSXXXXXXXXXXXXXXXXXXXXXXDAE---GARGSGDPKSAKNGKRPAAGGVFRVRAWLKRKAPATTNGSQRKXXXXXXXXXXXXXXXXXXXXXXDDGDSERGESGAMKRRRPSVGGSNTGDGSLASPSSANRSVAETRARGAPFSPRRLLGDRWSSSTADPWKRHATTLRAVAEQEARTLLLRRARLRAQVQELARFRATRPPEYDEWSSPDFLEKHRQTVSEITADADAIFVENLHRNLREAEEAVQHGLSKERSVPSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFARSLGGRKWWGRRGGGRGTGIQVHAPGTWGERQPTADIAETIKAAERDAAAARRRAFQTPTGRAEIARAVRRLKASRVIAPTSNTVAAAAKAGGEAPQTNTAQGTHVERHTAVTQVAAAGAVXXXXXXXXXXXXGLSEDAGAKHTASVAKVSTSNDVAGAVDRVAEREKRSPLVDQAEQLFQLFDADGSGAIDREELAPLLGQLGIWVTAKMASXXXXXXXXXXXXXXXXXXXVTWLENEGADLRRSPLSKMLRARQSVKAGGSSTRRLESQVRASIVARSRAAARAEVWASSGVTPXXXXXXXXXXXXXXXXXIDGPQEQAKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAATARKEPALAVEVTGGKERGRVLATRAARXXXXXXXXERDAERELVVKRAEDVAERRIKRQWRTQAGAAELKRERDRIRGAEESLNLTLRAWDADVGFAKEEAGVTMTDASALRETKRAEEKLRHMFRLFDVSCDGCIDAEELGRLLSRMNVPMSEVEIVGLLHEMDRQVTVDGSGDVDFCEFSAWWHKDGLKRSKRPAALIRSAASSLVAKVAPITAARRDARRALISRARAEARAEVKNVLRLEDEDEEALRLAKITTGNTASAVAADAASEYFVAFETRGGHKYGGTSSAPPGKPLVKDGTKGLGREGSDVGEGGEGRGDRLHATRLAAARSSKLARAEAEAYADVQAMILTQAGKRELARRTRDLRLEWNATIRTATRIARDSGSGEFGTAGSAKYSYEGDSHDKEEXXXXXXXXXQHATTTDSPGIPLVEAPFLRFLWGLHGSTAAAVAMETVGASAGVEPSELKYLCASLRSTLVGGANRRIRGSQATILGSTLAKGTTAGTADI-GTSADFALPRQAGKEVTSPNAAARTAGVESGDALSLSKIFDDHADDEIRDLKTLTRVELADVLASLHHPSSSALANSAGSAADGERRGRIKTQIRADLATIAKLKLKLFFTPGAFRKLAKQAMLAEGRAFERHELARAIALEDGEPWRLAEAAETKRAVESAGGATPADVDRLRAMTMGAAKLGRALAQGEELASAECRSFLKTSAGREELRATTAAVRDQRRQQLQHTAARTAAAVDPWRKSMVGVRTIRRIGSAMNNLARDELRRAFALCEADGVPGEICRAEAAHVLSFAGIPQTALAATGRVRVPLQEESEHSGGQPSQTPKSRRXXXXXXRWPWRGRHAKGPNGSQPPPGRQGTPPPRLPRNAVSRFLKIGGGAGPGGAKKQGNTGTGGNARVCPTNEDDGDDNAVVVGPIFVRPESSPSQAGEKEDRGDDLDGEGGDACIAGEEDDGRESDDHGSDGQFSVDMDMVDDVTNDEGFELGEMEILLAAVKARQTLAAKAASLGRLLARRALPTSFTDTRDARMLLMSRARSAGRNKAMHKFENLLTVETGDLFAAATHHHE 5904
EQHRRRGAERQWARLLDERSRLAAAG+RAEAAEEARIAPKGSAGAH+HAALGARLLAALSSDLKRGGGKSGSSEEEAVPT EEA ATVARLAFQAFD DGNG LDVSDLADLLGVLRRIAGRPPSARTA GSGAAAAGYGLEAAM AMDEDHSGQVDIDEFMRWFNGYDAHDGA RSTAPGELPQRG ESEEPLY+KVLGVRNGATGGTNAQE+RE N XXXXXXXXXXXXXXXXXXX D + GAR SGDPKSAKN KRPAAGGVFRVRAWLKRKAPATTNGSQRK XXXXXXXXXXXXXXXXX RPSVGGSNTGDGS ASPSSANRSVAETRARGAPFSPRRLLGDRWSSSTADPWKRHA TLRAVAEQEARTLLLRRARLRAQV ELARFRATRPPEYDEWSSPDFLEKHR+TV+EITADAD+IFVENLHRNLREAEEAVQHGLSKERSVPSPL XXXXXXXXXX A SLGGRKWWGRRGGGRGTG QV+APGTWGERQPTADIAET+KAAERDAAAARRRAFQTPTGRAEIARAVRRLKASRVIA TSNTVAAAA+AGGEAPQTNTAQGTH ER T VTQVAAAGAV GLSEDAGAKHTASVAK+STS +VAGAVDRV EREKRSPLV QAEQLFQLFDADGSGAIDREELAPLLGQLGIWVTAKMASXXXXXXXXXXXXXXXXXXXVTWLENEGADLRR+PLSKMLRA QSVKAGGSSTRRLESQVRASIVARSRAAARAEVWASSGVTP IDGP EQAKQ XXXXXX EAATARKEPALAV+VTGGKERGRVLATRA ERDAERELVVKRAEDVAERRIKRQWRTQAGAAELKRERDRIRGAEE+LNLTLRAWDA V FAKEEAGVT TDASALRETKRAEEKLRHMFRLFDVSCDGCI AEELGRLLSRMNVPMSE EIVGLLHEMDR DGSGDVDFCEFSAWWHKDGLKRS RPAALIRSAASSLVAKVAPITAARRDARRALISRARAEARAEVKNVLRLEDEDEEALRLAKI TGNTASAVAADAA EYFVAFETR G + GGTSSAPPGKPL+KDGT+GLG EGS VGEGGEGRGDRL+A RLAAARSSKLARAEAEAYADVQAMILTQAGKRELARRTRDLRLEW+A IRTAT IAR+SGSGE GTAGSA YSYEG SHDKEE QHAT+TD+ GIPLVEAP LRFLWGLH STAA V +ET GASAGVEPSELKY+ ASLRSTLVGGANRRI GSQ T+LGSTLAKGT TA+I TSADF LP QA +E T PNAA RTAGVESGDALSLS IFDDHA DEIRDLKTLTRV+LADVLASLH PSSSALANSAGSAA+GERR R K QIRADLATIAKLKLK+FFTPGAFRKLAKQA+LAEGRAFERHELARAIALEDGEPWRLAEAAETKR +ESAGGATPADVDRLRAMTMGAAKLGRALA GE AAR++ G+ RRI SAMNNLARDELRRAFALCEADGVPGEI RAEAAHVLSFAGIPQT LAATGRVRVPL EES+HSGGQPSQTPKS+R XXX RWPWRGR AKGP+ SQPPPGRQ TPPPR PRNAVSRFLKIGGGAGPGGAKKQGNTGTGG ARVCPTNEDDGDDNAVVVGPI V PES PSQAGEKEDRGDDLDGEGGDACI GEEDDGRESDDHGSDGQFSVDMDMVDDVTNDEGFELGEMEILLAAVKARQTLAAKAASLGRLLARRALP S TDTRDARMLLMSRARSAGR+KAMH+FENLLTVETGDLFAAA HHHE
Sbjct: 1011 EQHRRRGAERQWARLLDERSRLAAAGLRAEAAEEARIAPKGSAGAHEHAALGARLLAALSSDLKRGGGKSGSSEEEAVPTTEEATATVARLAFQAFDRDGNGELDVSDLADLLGVLRRIAGRPPSARTALGSGAAAAGYGLEAAMFAMDEDHSGQVDIDEFMRWFNGYDAHDGANRSTAPGELPQRGRESEEPLYVKVLGVRNGATGGTNAQEDREANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTADEDDTVGARASGDPKSAKNEKRPAAGGVFRVRAWLKRKAPATTNGSQRKQTKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPSVGGSNTGDGSFASPSSANRSVAETRARGAPFSPRRLLGDRWSSSTADPWKRHAKTLRAVAEQEARTLLLRRARLRAQVHELARFRATRPPEYDEWSSPDFLEKHRETVAEITADADSIFVENLHRNLREAEEAVQHGLSKERSVPSPLPPPDPGISAXXXXXXXXXXALHSDGSGNLATAIGVDGGSVGALASSPSR--LAWSLGGRKWWGRRGGGRGTGTQVYAPGTWGERQPTADIAETVKAAERDAAAARRRAFQTPTGRAEIARAVRRLKASRVIAATSNTVAAAAEAGGEAPQTNTAQGTHEERQTVVTQVAAAGAVSEGATWGAPANAGLSEDAGAKHTASVAKLSTSLNVAGAVDRVEEREKRSPLVGQAEQLFQLFDADGSGAIDREELAPLLGQLGIWVTAKMASXXXXXXXXXXXXXXXXXXXVTWLENEGADLRRAPLSKMLRAGQSVKAGGSSTRRLESQVRASIVARSRAAARAEVWASSGVTPVPAAAPAVVATTASTAAIDGPHEQAKQEDPNPQKQXXXXXXGEEEKKVIDEDAVAVEAATARKEPALAVKVTGGKERGRVLATRATGRRRRFEEEERDAERELVVKRAEDVAERRIKRQWRTQAGAAELKRERDRIRGAEEALNLTLRAWDAGVSFAKEEAGVTKTDASALRETKRAEEKLRHMFRLFDVSCDGCIHAEELGRLLSRMNVPMSEAEIVGLLHEMDR----DGSGDVDFCEFSAWWHKDGLKRSNRPAALIRSAASSLVAKVAPITAARRDARRALISRARAEARAEVKNVLRLEDEDEEALRLAKIATGNTASAVAADAAGEYFVAFETRVGRECGGTSSAPPGKPLLKDGTEGLGGEGSGVGEGGEGRGDRLNAKRLAAARSSKLARAEAEAYADVQAMILTQAGKRELARRTRDLRLEWSAAIRTATSIARESGSGELGTAGSADYSYEGASHDKEEQRTQRKEQRQHATSTDTSGIPLVEAPILRFLWGLHRSTAAGVTLETAGASAGVEPSELKYVGASLRSTLVGGANRRIWGSQVTLLGSTLAKGTAGRTANIVRTSADFGLPPQAEEEATLPNAA-RTAGVESGDALSLSTIFDDHAHDEIRDLKTLTRVDLADVLASLHRPSSSALANSAGSAAEGERRPRTKAQIRADLATIAKLKLKMFFTPGAFRKLAKQALLAEGRAFERHELARAIALEDGEPWRLAEAAETKRGIESAGGATPADVDRLRAMTMGAAKLGRALALGE--------------------------------------AARSS-----------GLPLQRRIASAMNNLARDELRRAFALCEADGVPGEISRAEAAHVLSFAGIPQTTLAATGRVRVPLLEESKHSGGQPSQTPKSQRRRXXXRRWPWRGRRAKGPSRSQPPPGRQVTPPPRHPRNAVSRFLKIGGGAGPGGAKKQGNTGTGGTARVCPTNEDDGDDNAVVVGPIVVGPESPPSQAGEKEDRGDDLDGEGGDACIGGEEDDGRESDDHGSDGQFSVDMDMVDDVTNDEGFELGEMEILLAAVKARQTLAAKAASLGRLLARRALPISLTDTRDARMLLMSRARSAGRDKAMHQFENLLTVETGDLFAAAAHHHE 2926
BLAST of mRNA_E-siliculosus-1a_M_contig82.16445.1 vs. uniprot
Match: A0A6H5L3X6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3X6_9PHAE) HSP 1 Score: 308 bits (788), Expect = 1.070e-91 Identity = 167/184 (90.76%), Postives = 171/184 (92.93%), Query Frame = 1
Query: 5353 GGAKKQGNTGTGGNARVCPTNEDDGDDNAVVVGPIFVRPESSPSQAGEKEDRGDDLDGEGGDACIAGEEDDGRESDDHGSDGQFSVDMDMVDDVTNDEGFELGEMEILLAAVKARQTLAAKAASLGRLLARRALPTSFTDTRDARMLLMSRARSAGRNKAMHKFENLLTVETGDLFAAATHHHE 5904
G ++ QGNTGTGGNARVCPTNEDD DDNA+ V PI V PES PSQAGEK DRGDDLDGEGGDACI GEEDDGRESDDHGSDGQFSVDMD+VDDVTNDEGFELGEMEILLAAVKARQTLAAKAASLGRLLARRALPTSFTDTRDA MLLMSRARSAGR KAM KFENLLTVETGDLFAAATHHHE
Sbjct: 65 GASRLQGNTGTGGNARVCPTNEDDDDDNAIAVSPIVVGPESPPSQAGEK-DRGDDLDGEGGDACIGGEEDDGRESDDHGSDGQFSVDMDIVDDVTNDEGFELGEMEILLAAVKARQTLAAKAASLGRLLARRALPTSFTDTRDAHMLLMSRARSAGREKAMRKFENLLTVETGDLFAAATHHHE 247 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig82.16445.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig82.16445.1 >prot_E-siliculosus-1a_M_contig82.16445.1 ID=prot_E-siliculosus-1a_M_contig82.16445.1|Name=mRNA_E-siliculosus-1a_M_contig82.16445.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1969bp EQHRRRGAERQWARLLDERSRLAAAGVRAEAAEEARIAPKGSAGAHQHAAback to top mRNA from alignment at E-siliculosus-1a_M_contig82:703848..719822+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig82.16445.1 ID=mRNA_E-siliculosus-1a_M_contig82.16445.1|Name=mRNA_E-siliculosus-1a_M_contig82.16445.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=15975bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig82:703848..719822+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig82:703848..719822+ >mRNA_E-siliculosus-1a_M_contig82.16445.1 ID=mRNA_E-siliculosus-1a_M_contig82.16445.1|Name=mRNA_E-siliculosus-1a_M_contig82.16445.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=11814bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig82:703848..719822+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |