mRNA_E-siliculosus-1a_M_contig82.16417.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig82.16417.1
Unique NamemRNA_E-siliculosus-1a_M_contig82.16417.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig82.16417.1 vs. uniprot
Match: D7FWH9_ECTSI (VPS9 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWH9_ECTSI)

HSP 1 Score: 842 bits (2176), Expect = 4.100e-303
Identity = 454/465 (97.63%), Postives = 455/465 (97.85%), Query Frame = 3
Query:  129 MDASPEAILHRVRERDAQMCVLLQRTELLNRVHRGAISELPPSPEGMGSRDSLKARLAVICGCQDQAETVLNEAVPLLQPPPS-SSPVASTPDAYTKAIRSLLSTPKANTAATARSTRAPSNSSGHPPVQSGGPPSVRRAERGDGGRNSSSAVTYRVFLERLTRSESEGFVEAIRLFLFSILGNGGAVNPAAGRPQASSNSDIRRETEEVEVYGSSFLSQRCAEFFLAMQNAMGVHTSWAELGYDSLVACREHLERFVMSKIHPLAFGSKLDGAVDASISARLQSLQFLTPHDLNVSVYAREETVLTLAQEELRKMGRGRCPGDIVSRVVRCCDTLFALIDQGRRFKQGVGRGXXXXXXXXXX--DSNVSSWRPERDPAGTADDFLPVLIYVVLRARVPRLHSMCEYVQAFHSPVALMSRPGYCFVALRSAVEFLMTLNGAAVGMSEQDFRRRALDAAIGVDAGS 1514
            MDASPEAILHRVRERDAQMCVLLQRTELLNRVHRGAISELPPSPEGMG RDSLKARLAVI GCQDQAETVLNEAVPLLQPP   SSPVASTPDAYTKAIRSLLSTPKANTAATARSTRAPSNSSGHP VQSGGPPSVRRAERGDGGRNSSSAVTYRVFLERLTRSESEGFVEAIRLFLFSILGNGGAVNPAAGRP+ASSNSDIRRETEEVEVYGSSFLSQRCAEFFLAMQNAMGVHTSWAELGYDSLVACREHLERFVMSKIHPLAFGSKLDGAVDASISARLQSLQFLTPHDLNVSVYAREETVLTLAQEELRKMGRGRCPGDIVSRVVRCCDTLFALIDQGRRFKQGVGR XXXXXXXXXX  DSNVSSWRPERDPAGTADDFLPVLIYVVLRARVPRLHSMCEYVQAFHSPVALMSRPGYCFVALRSAVEFLMTLNGAAVGMSEQDFRRRALDAAIGVDA S
Sbjct:    1 MDASPEAILHRVRERDAQMCVLLQRTELLNRVHRGAISELPPSPEGMGGRDSLKARLAVIYGCQDQAETVLNEAVPLLQPPXXXSSPVASTPDAYTKAIRSLLSTPKANTAATARSTRAPSNSSGHPRVQSGGPPSVRRAERGDGGRNSSSAVTYRVFLERLTRSESEGFVEAIRLFLFSILGNGGAVNPAAGRPRASSNSDIRRETEEVEVYGSSFLSQRCAEFFLAMQNAMGVHTSWAELGYDSLVACREHLERFVMSKIHPLAFGSKLDGAVDASISARLQSLQFLTPHDLNVSVYAREETVLTLAQEELRKMGRGRCPGDIVSRVVRCCDTLFALIDQGRRFKQGVGRXXXXXXXXXXXXXDSNVSSWRPERDPAGTADDFLPVLIYVVLRARVPRLHSMCEYVQAFHSPVALMSRPGYCFVALRSAVEFLMTLNGAAVGMSEQDFRRRALDAAIGVDASS 465          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16417.1 vs. uniprot
Match: A0A2D4CFQ8_PYTIN (VPS9 domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CFQ8_PYTIN)

HSP 1 Score: 187 bits (476), Expect = 1.410e-47
Identity = 117/329 (35.56%), Postives = 177/329 (53.80%), Query Frame = 3
Query:  543 AERGDGGRNSSSAVTYRVFLERLTRSESEGFVEAIRLFLFSILGNGGAVNPAAGRPQASSNSDIRRETEEVEVYGSSFLSQRCAEFFLAMQNAMGVHTSWAELGYDSLVACREHLERFVMSKIHPLAFGSKLDGAV-----DASISARLQSLQFLTPHDLNVSVYAREETVLTLAQEELRKMGRGRCPGDIVSRVVRCCDTLFALIDQGRRFKQGVGRGXXXXXXXXXXDSNVSSWRPERDPAGTADDFLPVLIYVVLRARVPRLHSMCEYVQAFHSPVALMSRPGYCFVALRSAVEFLMTLNGAAVGMSEQDFRRRALDAAIGVDAGS 1514
            AE+ D    S +A+TY  FL+RL    S   ++ IRLFL SILG  G   P    P+AS       +  E + YG     +RC  FF +M + +  H  W      +L   R+ +E++VM K+   A  ++LD  +     D  +  R+Q L F+TP  L++    R E V ++A++ELR++   R PGD ++ +VRCC  +F +++        + RG              SS RP       ADDFLPV IY+VL +++PRLHS CEY+ A+ +   LMS+ GYCFV LRSA+EF+  ++ + + +S++DF+R  L      +AGS
Sbjct:  308 AEQDDHDSESGAAMTYAEFLDRLRLPASRDILDTIRLFLASILGPRGDGEP----PRAS-------DYVEYDFYGIHEFRRRCEYFFQSMSDLLQRHPVWRHASEATLATARDGIEKYVMDKLSDXAL-NQLDECIAWREEDDRLLRRMQLLSFITPDMLDIKPCMRNEVVWSMAEDELRRINACRAPGDKINCIVRCCSIIFGVLN--------LSRGD-------------SSNRPG------ADDFLPVFIYIVLXSKIPRLHSNCEYIAAYRNSADLMSKAGYCFVNLRSAIEFINVVDASMLSISDEDFKRTTLTLGFLNEAGS 597          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16417.1 vs. uniprot
Match: A0A329SIN0_9STRA (VPS9 domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SIN0_9STRA)

HSP 1 Score: 181 bits (460), Expect = 7.540e-45
Identity = 105/303 (34.65%), Postives = 168/303 (55.45%), Query Frame = 3
Query:  579 AVTYRVFLERLTRSESEGFVEAIRLFLFSILGNGGAVNPAAGRPQASSNSDIRRETEEVEVYGSSFLSQRCAEFFLAMQNAMGVHTSWAELGYDSLVACREHLERFVMSKIHPLAFGSKLDGAV----DASISARLQSLQFLTPHDLNVSVYAREETVLTLAQEELRKMGRGRCPGDIVSRVVRCCDTLFALIDQGRRFKQGVGRGXXXXXXXXXXDSNVSSWRPERDPAGTADDFLPVLIYVVLRARVPRLHSMCEYVQAFHSPVALMSRPGYCFVALRSAVEFLMTLNGAAVGMSEQDFRR 1475
            ++TY  FL+R++   S   ++ IR+F+ SILG  G      GRP  S+      +  E + YG     +RC  FF +M++ +  H +W       L   R+ +E++VM K+  +AF    +       D ++  R+Q L F+TP  L++    R E V ++A++ELR++   R PGD ++ +VRCC  +F++++        + RG              S  RP       ADDFLPV IY+VL +++PRLHS CEY+ A+ +   LMS+ GYCFV LRSAVEF+M ++G+ + +S+ +F+R
Sbjct:  431 SLTYGEFLQRISLPASRDILDKIRMFVGSILGPRGD-----GRPPRST------DYVEYDFYGKHEFRRRCVRFFESMEDILLNHPAWRRASEAKLAKARDGIEKYVMDKVSDIAFNQLKECQQWMKEDEALLRRMQLLSFITPAMLDIKPCMRNEVVWSMAEDELRRINSFRSPGDKINCIVRCCSVIFSVLN--------LSRGD-------------SGSRPG------ADDFLPVFIYIVLHSQIPRLHSNCEYISAYRNQADLMSKAGYCFVNLRSAVEFIMAMDGSMLSISDDEFQR 695          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16417.1 vs. uniprot
Match: A0A8K1CLE3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CLE3_PYTOL)

HSP 1 Score: 179 bits (454), Expect = 7.650e-45
Identity = 109/307 (35.50%), Postives = 169/307 (55.05%), Query Frame = 3
Query:  570 SSSAVTYRVFLERLTRSESEGFVEAIRLFLFSILGNGGAVNPAAGRPQASSNSDIRRETEEVEVYGSSFLSQRCAEFFLAMQNAMGVHTSWAELGYDSLVACREHLERFVMSKIHPLAFGSKLDGAV-----DASISARLQSLQFLTPHDLNVSVYAREETVLTLAQEELRKMGRGRCPGDIVSRVVRCCDTLFALIDQGRRFKQGVGRGXXXXXXXXXXDSNVSSWRPERDPAGTADDFLPVLIYVVLRARVPRLHSMCEYVQAFHSPVALMSRPGYCFVALRSAVEFLMTLNGAAVGMSEQDFRR 1475
            S   +TY  FLERL    S   +E IR+FL SILG  G  +P    P+AS       +  E + YG     +RC  F  +M   +  H  W      +L   R+ +E++VM K+  +A  ++LD  +     D  +  R+++L F+TP  L++    R E V ++A++ELR++   R PGD ++ +VRCC  +F++++        + RG              S+ RP       ADDFLPV IY+VL++++PRL+S CEY+ A+ +   LMS+ GYCFV LRSA+EF+M ++ + + +SEQDF R
Sbjct:  291 SEQEMTYAEFLERLRLPASRDILETIRMFLDSILGPRGDGSP----PRAS-------DYIEYDFYGHHEFRRRCEYFVQSMHEMLLNHPVWCHASEATLATARDGIEKYVMDKLSDIAM-NQLDECIHWKEEDERLLQRMKALSFITPDMLDIKPCMRNEVVWSMAEDELRRINSFRSPGDKINCIVRCCSIIFSVLN--------LARGD-------------SANRPG------ADDFLPVFIYIVLQSKIPRLYSNCEYIAAYRNSADLMSKAGYCFVNLRSAIEFIMVVDASMLSVSEQDFER 558          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16417.1 vs. uniprot
Match: A0A3F2RKA8_9STRA (VPS9 domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RKA8_9STRA)

HSP 1 Score: 176 bits (445), Expect = 1.560e-44
Identity = 103/310 (33.23%), Postives = 167/310 (53.87%), Query Frame = 3
Query:  558 GGRNSSSAVTYRVFLERLTRSESEGFVEAIRLFLFSILGNGGAVNPAAGRPQASSNSDIRRETEEVEVYGSSFLSQRCAEFFLAMQNAMGVHTSWAELGYDSLVACREHLERFVMSKIHPLAFGSKLDGAV----DASISARLQSLQFLTPHDLNVSVYAREETVLTLAQEELRKMGRGRCPGDIVSRVVRCCDTLFALIDQGRRFKQGVGRGXXXXXXXXXXDSNVSSWRPERDPAGTADDFLPVLIYVVLRARVPRLHSMCEYVQAFHSPVALMSRPGYCFVALRSAVEFLMTLNGAAVGMSEQDFRR 1475
            G +    ++TY  FL+R++   S   ++ IR+F+ SILG  G      GRP  S+      +  E + YG     +RC  FF  M++ +  H +W       L   R+ +E++VM K+  +A     +       D ++  R+Q L F+TP  L++    R E V ++A++ELR++   R PGD ++ +VRCC  +F++++        + RG              S  RP       ADDFLPV IY+VL +++PRL+S CEY+ A+ +   LMS+ GYCFV LRSA+EF+M ++G+ + +S  +F+R
Sbjct:  168 GNQGDEDSLTYGEFLQRISLPASRDILDKIRMFVGSILGPRGD-----GRPPRST------DYVEYDFYGKHEFRRRCTRFFENMEDLLQDHPAWRHASETKLAKARDGIEKYVMDKVSDIACNQLKECQQWMKEDEALLRRMQLLSFITPAMLDIKPCMRNEVVWSMAEDELRRINSFRSPGDKINCIVRCCSVIFSVLN--------LSRGD-------------SGSRPG------ADDFLPVFIYIVLHSQIPRLYSNCEYISAYRNQADLMSKAGYCFVNLRSAIEFIMVMDGSMLSISNDEFQR 439          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16417.1 vs. uniprot
Match: G4Z8U2_PHYSP (VPS9 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z8U2_PHYSP)

HSP 1 Score: 181 bits (458), Expect = 5.320e-44
Identity = 104/304 (34.21%), Postives = 167/304 (54.93%), Query Frame = 3
Query:  579 AVTYRVFLERLTRSESEGFVEAIRLFLFSILGNGGAVNPAAGRPQASSNSDIRRETEEVEVYGSSFLSQRCAEFFLAMQNAMGVHTSWAELGYDSLVACREHLERFVMSKIHPLAFGSKLDGAV----DASISARLQSLQFLTPHDLNVSVYAREETVLTLAQEELRKMGRGRCPGDIVSRVVRCCDTLFALIDQGRRFKQGVGRGXXXXXXXXXXDSNVSSWRPERDPAGTADDFLPVLIYVVLRARVPRLHSMCEYVQAFHSPVALMSRPGYCFVALRSAVEFLMTLNGAAVGMSEQDFRRR 1478
            ++TY  FL+R++   S   ++ IR+F+ SILG  G      GRP  S+      +  E + YG     +RC  FF  M+  +  H +W       L   R+ +E++VM K+  +AF    +       D ++  R+Q L F+TP  L++    R E V ++A++ELR++   R PGD ++ +VRCC  +F++++        + RG              S  RP       ADDFLPV IY+VL +++PRLHS CEY+ A+ +   LMS+ GYCFV LRSA+EF+M ++G+ + +S+ +F+R+
Sbjct:  418 SLTYGEFLQRISLPASRDILDKIRMFVGSILGPRGD-----GRPPRST------DYVEYDFYGKHEFRRRCNRFFETMEEILLNHPAWRHASEGKLAKARDGIEKYVMDKVSDIAFNQLKECQQWMKEDEALLRRMQLLSFITPAMLDIKPCMRNEVVWSMAEDELRRINSFRSPGDKINCIVRCCSVIFSVLN--------LSRGD-------------SGSRPG------ADDFLPVFIYIVLHSQIPRLHSNCEYISAYRNQADLMSKAGYCFVNLRSAIEFIMVMDGSMLSISDDEFQRK 683          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16417.1 vs. uniprot
Match: V9FZS5_PHYPR (VPS9 domain-containing protein n=33 Tax=Phytophthora TaxID=4783 RepID=V9FZS5_PHYPR)

HSP 1 Score: 177 bits (450), Expect = 1.040e-43
Identity = 103/302 (34.11%), Postives = 167/302 (55.30%), Query Frame = 3
Query:  582 VTYRVFLERLTRSESEGFVEAIRLFLFSILGNGGAVNPAAGRPQASSNSDIRRETEEVEVYGSSFLSQRCAEFFLAMQNAMGVHTSWAELGYDSLVACREHLERFVMSKIHPLAFGSKLDGAV----DASISARLQSLQFLTPHDLNVSVYAREETVLTLAQEELRKMGRGRCPGDIVSRVVRCCDTLFALIDQGRRFKQGVGRGXXXXXXXXXXDSNVSSWRPERDPAGTADDFLPVLIYVVLRARVPRLHSMCEYVQAFHSPVALMSRPGYCFVALRSAVEFLMTLNGAAVGMSEQDFRR 1475
            +TY  FL+R++   S   ++ IR+F+ SILG  G      GRP  S+      +  E + YG     +RC  FF +M++ +  H +W  +    L   R+ +E++VM K+  +AF    +       D ++  R+Q L F+TP  L++    R E V ++A++ELR++   R PGD ++ +VRCC  +F++++        + RG              S  RP       ADDFLPV IY+VL +++PRL+S CEY+ A+ +   LMS+ GYCFV LRSAVEF+  ++G+ + +S+ +F+R
Sbjct:  392 LTYGEFLQRISLPASRDILDKIRMFVGSILGPRGD-----GRPPRST------DYVEYDFYGKHEFRRRCIRFFESMEDILLNHPAWRHVSEAKLAKARDGIEKYVMDKVSDIAFNKLKECQQWMNEDEALLRRMQLLSFITPEMLDIKPCMRNEVVWSMAEDELRRINSFRSPGDKINCIVRCCSVIFSVLN--------LSRGD-------------SGSRPG------ADDFLPVFIYIVLHSQIPRLYSNCEYISAYRNQADLMSKAGYCFVNLRSAVEFITAMDGSMLSISDDEFQR 655          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16417.1 vs. uniprot
Match: F0WL76_9STRA (Uncharacterized protein AlNc14C141G7264 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WL76_9STRA)

HSP 1 Score: 175 bits (443), Expect = 2.720e-43
Identity = 107/330 (32.42%), Postives = 170/330 (51.52%), Query Frame = 3
Query:  540 RAERGDGGRNSSSAVTYRVFLERLTRSESEGFVEAIRLFLFSILGNGGAVNPAAGRPQASSNSDIRRETEEVEVY---GSSFLSQRCAEFFLAMQNAMGVHTSWAELGYDSLVACREHLERFVMSKIHPLAFGS----KLDGAVDASISARLQSLQFLTPHDLNVSVYAREETVLTLAQEELRKMGRGRCPGDIVSRVVRCCDTLFALIDQGRRFKQGVGRGXXXXXXXXXXDSNVSSWRPERDPAGTADDFLPVLIYVVLRARVPRLHSMCEYVQAFHSPVALMSRPGYCFVALRSAVEFLMTLNGAAVGMSEQDFRRRALDAAIGVDA 1508
            +     GG+  +  + Y  F+ RL + +S     A+RLF+ SILG  G  +P +   +               +Y   G+  L  RC  FF  M++ +G+H +W +     L   RE +E+FVM K+   A  +    KL  A D  ++ R++ LQF+TP  L++    + E V ++AQ+ELR++     PGD +  + RCC+ +F+++   R                       S  RP       ADDFLP+ IY+VLR+++P+L+S CEY+ A+ +P  LM++ GYC V LRSA+EF++ L+G  + +  QDF R   +A   VDA
Sbjct:  287 KTHEAQGGKIKALELGYVDFMNRLRQPDSRDLYFAVRLFVESILGPKGDGSPPSYNDRV--------------IYTFRGTQKLRARCHHFFQGMEDRLGIHPAWRQASEKDLQGAREWIEKFVMDKVFHFAMFTQNECKLWEAEDRRLARRMKILQFITPEMLDIKQCMQNEIVWSMAQDELRRINGVTSPGDKIGCIERCCNVIFSVLSLSR---------------------GASESRPG------ADDFLPLFIYIVLRSQIPQLYSNCEYITAYRNPSDLMTKSGYCLVNLRSALEFIVALDGTMLSVPAQDFARLYQEAERAVDA 575          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16417.1 vs. uniprot
Match: A0A6A4EIB8_9STRA (VPS9 domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EIB8_9STRA)

HSP 1 Score: 175 bits (443), Expect = 1.150e-42
Identity = 99/303 (32.67%), Postives = 162/303 (53.47%), Query Frame = 3
Query:  579 AVTYRVFLERLTRSESEGFVEAIRLFLFSILGNGGAVNPAAGRPQASSNSDIRRETEEVEVYGSSFLSQRCAEFFLAMQNAMGVHTSWAELGYDSLVACREHLERFVMSKIHPLAFGSKLDGAV----DASISARLQSLQFLTPHDLNVSVYAREETVLTLAQEELRKMGRGRCPGDIVSRVVRCCDTLFALIDQGRRFKQGVGRGXXXXXXXXXXDSNVSSWRPERDPAGTADDFLPVLIYVVLRARVPRLHSMCEYVQAFHSPVALMSRPGYCFVALRSAVEFLMTLNGAAVGMSEQDFRR 1475
            ++TY  FL+R++   S   ++ IR+F+ SILG           P+    +    +  E + YG     +RC  FF  M+  +  H +W       L   R+ +E++VM K+  +A+    +       D ++  R+Q L F+TP  L++    R E V ++A++ELR++   R PGD ++ +VRCC  +F++++        + RG              S  RP       ADDFLPV IY+VL +++PRLHS CEY+ A+ +   LMS+ GYCFV LRSA+EF+M ++G+ + +S  +F+R
Sbjct:  415 SLTYGEFLQRVSLPASRDILDKIRMFVGSILG-----------PRGDGRAPRSTDYVEFDFYGKHEFRRRCNRFFETMEEILLNHPAWRHASEAKLAKARDGIEKYVMDKVSDIAYNQLKECQQWVKEDEALLRRMQLLSFITPAMLDIKPCMRNEVVWSMAEDELRRINSFRSPGDKINCIVRCCSVIFSVLN--------LSRGD-------------SGSRPG------ADDFLPVFIYIVLHSQIPRLHSNCEYISAYRNQADLMSKAGYCFVNLRSAIEFIMVMDGSMLSLSGDEFQR 679          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16417.1 vs. uniprot
Match: A0A3M6VKN3_9STRA (VPS9 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKN3_9STRA)

HSP 1 Score: 174 bits (440), Expect = 2.600e-42
Identity = 105/312 (33.65%), Postives = 170/312 (54.49%), Query Frame = 3
Query:  555 DGGRNSSSAVTYRVFLERLTRSESEGFVEAIRLFLFSILGNGGAVNPAAGRPQASSNSDIRRETEEVEV--YGSSFLSQRCAEFFLAMQNAMGVHTSWAELGYDSLVACREHLERFVMSKIHPLAFGSKLDG----AVDASISARLQSLQFLTPHDLNVSVYAREETVLTLAQEELRKMGRGRCPGDIVSRVVRCCDTLFALIDQGRRFKQGVGRGXXXXXXXXXXDSNVSSWRPERDPAGTADDFLPVLIYVVLRARVPRLHSMCEYVQAFHSPVALMSRPGYCFVALRSAVEFLMTLNGAAVGMSEQDFR 1472
            +G +    ++TY  FL R+++  S   +  IR+F+ SILG  G      GRP         R T+ +E   YG+  L +RC  FF +M + +  H +W  +    L   R+ +E++VM K+  +AF    +       D ++  R+Q L F+TP  L++    R E V +LA++ELR++   R PG+ ++ +VRCC  +F++++        + RG              S  RP       ADDFLPV IY+VL +++PRLHS CEY+ A+ +   LMS+ GYCFV LRSA+EF+M ++G+ + + + +F+
Sbjct:  408 NGDKADEDSLTYGEFLHRISQPASRDILNKIRMFVGSILGPRGD-----GRPP--------RSTDYIEYCFYGTHELRRRCNRFFESMGDNLLHHPAWRHVSDAKLAKARDGIEKYVMDKVSDIAFNRLKECHDWVKEDEALLRRMQLLSFITPAMLDIKPCMRNEVVWSLAEDELRRINSFRSPGEKINCIVRCCGVIFSVLN--------LSRGD-------------SGSRPG------ADDFLPVFIYIVLHSQIPRLHSNCEYISAYRNQADLMSKAGYCFVNLRSAIEFIMVMDGSMLSIPDDEFQ 679          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig82.16417.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWH9_ECTSI4.100e-30397.63VPS9 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A2D4CFQ8_PYTIN1.410e-4735.56VPS9 domain-containing protein (Fragment) n=1 Tax=... [more]
A0A329SIN0_9STRA7.540e-4534.65VPS9 domain-containing protein n=2 Tax=Phytophthor... [more]
A0A8K1CLE3_PYTOL7.650e-4535.50Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3F2RKA8_9STRA1.560e-4433.23VPS9 domain-containing protein n=4 Tax=Phytophthor... [more]
G4Z8U2_PHYSP5.320e-4434.21VPS9 domain-containing protein n=1 Tax=Phytophthor... [more]
V9FZS5_PHYPR1.040e-4334.11VPS9 domain-containing protein n=33 Tax=Phytophtho... [more]
F0WL76_9STRA2.720e-4332.42Uncharacterized protein AlNc14C141G7264 n=1 Tax=Al... [more]
A0A6A4EIB8_9STRA1.150e-4232.67VPS9 domain-containing protein n=5 Tax=Phytophthor... [more]
A0A3M6VKN3_9STRA2.600e-4233.65VPS9 domain-containing protein n=1 Tax=Peronospora... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig82contigE-siliculosus-1a_M_contig82:452193..458392 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1389
Model size2121
Exons7
Ec32 orthologEc-26_006550.1
Ec32 ortholog descriptionVacuolar sorting protein 9, subgroup
Hectar predicted targeting categoryother localisation
BRITEko00000,ko01000,ko04121
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.GM
EC2.3.2.27
EggNOG OGsCOG0666@1,KOG2319@2759
EggNOG free text desc.guanyl-nucleotide exchange factor activity
KEGG koko:K10645
Preferred nameMIB1
Seed eggNOG ortholog2880.D7FWH9
Seed ortholog evalue1.5e-242
Seed ortholog score845.1
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936257.2534642-UTR-E-siliculosus-1a_M_contig82:452192..4523201622936257.2534642-UTR-E-siliculosus-1a_M_contig82:452192..452320Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig82 452193..452320 +
1696250995.1226115-UTR-E-siliculosus-1a_M_contig82:452192..4523201696250995.1226115-UTR-E-siliculosus-1a_M_contig82:452192..452320Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig82 452193..452320 +
1622936257.391648-UTR-E-siliculosus-1a_M_contig82:457788..4583921622936257.391648-UTR-E-siliculosus-1a_M_contig82:457788..458392Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig82 457789..458392 +
1696250995.2030966-UTR-E-siliculosus-1a_M_contig82:457788..4583921696250995.2030966-UTR-E-siliculosus-1a_M_contig82:457788..458392Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig82 457789..458392 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936257.2736688-CDS-E-siliculosus-1a_M_contig82:452320..4525181622936257.2736688-CDS-E-siliculosus-1a_M_contig82:452320..452518Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 452321..452518 +
1696250995.1359432-CDS-E-siliculosus-1a_M_contig82:452320..4525181696250995.1359432-CDS-E-siliculosus-1a_M_contig82:452320..452518Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 452321..452518 +
1622936257.289933-CDS-E-siliculosus-1a_M_contig82:453071..4535321622936257.289933-CDS-E-siliculosus-1a_M_contig82:453071..453532Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 453072..453532 +
1696250995.1467981-CDS-E-siliculosus-1a_M_contig82:453071..4535321696250995.1467981-CDS-E-siliculosus-1a_M_contig82:453071..453532Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 453072..453532 +
1622936257.308176-CDS-E-siliculosus-1a_M_contig82:455185..4552901622936257.308176-CDS-E-siliculosus-1a_M_contig82:455185..455290Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 455186..455290 +
1696250995.1563847-CDS-E-siliculosus-1a_M_contig82:455185..4552901696250995.1563847-CDS-E-siliculosus-1a_M_contig82:455185..455290Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 455186..455290 +
1622936257.3245823-CDS-E-siliculosus-1a_M_contig82:455618..4557811622936257.3245823-CDS-E-siliculosus-1a_M_contig82:455618..455781Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 455619..455781 +
1696250995.1664596-CDS-E-siliculosus-1a_M_contig82:455618..4557811696250995.1664596-CDS-E-siliculosus-1a_M_contig82:455618..455781Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 455619..455781 +
1622936257.3403716-CDS-E-siliculosus-1a_M_contig82:456629..4569521622936257.3403716-CDS-E-siliculosus-1a_M_contig82:456629..456952Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 456630..456952 +
1696250995.1765158-CDS-E-siliculosus-1a_M_contig82:456629..4569521696250995.1765158-CDS-E-siliculosus-1a_M_contig82:456629..456952Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 456630..456952 +
1622936257.3563497-CDS-E-siliculosus-1a_M_contig82:457376..4574721622936257.3563497-CDS-E-siliculosus-1a_M_contig82:457376..457472Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 457377..457472 +
1696250995.1855369-CDS-E-siliculosus-1a_M_contig82:457376..4574721696250995.1855369-CDS-E-siliculosus-1a_M_contig82:457376..457472Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 457377..457472 +
1622936257.376877-CDS-E-siliculosus-1a_M_contig82:457745..4577881622936257.376877-CDS-E-siliculosus-1a_M_contig82:457745..457788Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 457746..457788 +
1696250995.194438-CDS-E-siliculosus-1a_M_contig82:457745..4577881696250995.194438-CDS-E-siliculosus-1a_M_contig82:457745..457788Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 457746..457788 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig82.16417.1prot_E-siliculosus-1a_M_contig82.16417.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig82 452321..457788 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig82.16417.1

>prot_E-siliculosus-1a_M_contig82.16417.1 ID=prot_E-siliculosus-1a_M_contig82.16417.1|Name=mRNA_E-siliculosus-1a_M_contig82.16417.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=463bp
MDASPEAILHRVRERDAQMCVLLQRTELLNRVHRGAISELPPSPEGMGSR
DSLKARLAVICGCQDQAETVLNEAVPLLQPPPSSSPVASTPDAYTKAIRS
LLSTPKANTAATARSTRAPSNSSGHPPVQSGGPPSVRRAERGDGGRNSSS
AVTYRVFLERLTRSESEGFVEAIRLFLFSILGNGGAVNPAAGRPQASSNS
DIRRETEEVEVYGSSFLSQRCAEFFLAMQNAMGVHTSWAELGYDSLVACR
EHLERFVMSKIHPLAFGSKLDGAVDASISARLQSLQFLTPHDLNVSVYAR
EETVLTLAQEELRKMGRGRCPGDIVSRVVRCCDTLFALIDQGRRFKQGVG
RGGGGGGGGGEGDSNVSSWRPERDPAGTADDFLPVLIYVVLRARVPRLHS
MCEYVQAFHSPVALMSRPGYCFVALRSAVEFLMTLNGAAVGMSEQDFRRR
ALDAAIGVDAGS*
back to top

mRNA from alignment at E-siliculosus-1a_M_contig82:452193..458392+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig82.16417.1 ID=mRNA_E-siliculosus-1a_M_contig82.16417.1|Name=mRNA_E-siliculosus-1a_M_contig82.16417.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=6200bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig82:452193..458392+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CCTGTCTGGGCTTGTCCGTGCCTTGTGTTGTTACCGCAGCAGCCAGCCAG CCACTCCGTGTGTCTTTGGTCTCGTTGCCCATCTCTTTTCGCCCGTCTCT CTCGCTCTTTCCCTCCCTACAAGCAGCAATGGATGCTTCGCCGGAAGCTA TTCTGCATCGAGTGAGAGAGCGCGATGCGCAGATGTGCGTTCTCCTTCAA CGGACCGAGCTCCTGAATCGTGTTCATCGTGGAGCAATCAGCGAGCTACC ACCTTCGCCAGAGGGAATGGGTAGCCGTGATTCTTTGAAGGCGCGCCTGG CCGTGATTTGTGGATGCCAGGACCAGGTAAGCAAGGCGTCATGCATATGT ATGCATGGGCGCTTGTTGTTCATCCGAGGATGCCTAACTTGATCGAGGGT CTCTGCCGTGCCCGATAGCCGAGAGGTATCACTACTGCAGTACAGCTGCA TGAATCATCGCGACTAAATATTATAGCTGTATCGTGGGCCTTGAATGCGT TGTATGTGGAGATGAAATTATATTGTTTCCGCATGCATATCGTAGTCTAA ATCGACAGGAACAACAGATTTCCCGAGACACTCCGCAGGTCCAGCTTTCT GTGTATAATGGCATCTGAGGCAACGCAACCTGGTTAACCCGTAGGGATTC GAGGTCAAACACATGTCGGCACTAAATGTCGGCACTACGGCGCTAGTCTA GGGTTGGGGATTCAACCATATACTCGTTGCGTGCCCCTGTTTTCTGCCAT CAATTTTCTGGTAACGTTTTATGTTCGTAAAGTGCGCATGTTTATAGCCC CGACATCTTTTCAACTGCAACCGCGCGAGAGAGCGCCTCTAAGAATCCTC ATGACTCCCCCCTCGTGCCATGTTCGCAGGCAGAAACCGTACTCAACGAG GCTGTCCCGCTGCTGCAGCCGCCGCCATCATCTTCGCCTGTGGCCTCTAC ACCTGATGCTTACACCAAAGCCATAAGGTCTCTCCTTTCCACGCCCAAAG CCAACACTGCTGCTACTGCTCGCTCCACGAGAGCGCCCTCAAACTCCTCG GGACACCCCCCTGTACAATCCGGCGGCCCCCCTTCCGTCCGCCGTGCCGA GCGAGGAGACGGTGGCAGAAACAGCAGCAGTGCGGTAACGTATCGCGTGT TCCTGGAACGCTTGACGCGTTCGGAGAGCGAGGGGTTCGTGGAAGCTATC CGGCTGTTCCTCTTCAGCATCCTTGGGAACGGTGGCGCCGTCAACCCCGC CGCCGGCCGGCCGCAGGCGTCGAGCAACAGTGACATCCGGCGGGAGACGG AAGAGGTGGAGGTCTACGGCTCGTCGTTTCTTTCGCAGAGGTACTTAGAG GAGTGTTGCATGAAGCTGCTGTGTTTTGTGGGCGTGTTGCATACATCAGA CTAATACGGCACCAGCCCGCAAAAAAGAGGATGGTGCTGAAGTACACTAG CAAATACTTGTGACAAAGGAGGAGCGGTGGTCCAAATAGCCAATCCTTCC AATCGACAGGAGTACCTCAAGAAAAACACATCTCTTGTGAAACCAGCAGT GTTGCCGCAAACAGCGAGCAGTGTTCAAGAATACCGCCTTTTCGCCAGAA CAGCATTGTGAAGACGTACTGCGATTGTGTACGAAATACCGCTCAGTTTC TCCCTGGCTCCGGACGAACTAGGTAGGTGTACTATCGCGGAGCTGATTTT CCCCTACAACCAGGAGGCACAAAGCCTGAAAATGAGGCTCCGTATCCCAC AAATCCACACGTACAGGAGGTAATCGATAAATGCGTTTACGGAATGGAAA AAGCGGGACCTGTCGAACAACGACGGTGCCCGCGGGGATCAGCAGTACCG TTGGTAGCGAAAGCCGACGGCTCTCCCCGGTTTTGCGCAGATTACAGACC AACAATAAAAAAGTTGATCCGAAATGTCGGCCAATGCTGGAAATGGCTCG CCACATCGAACATAATTGCTGTATGTGGCGTAACGTGCTATGTAACCGCT CGGCTCAACGCGCTCGAGGAGGCCTTCGAACAACGGGTCACGTCTCGAGC GCGACCTCGAAAACACAAGACAGTTCGCCCGAACGCAAGGACAATTAAGG CCAGTGTATGCATACCCCCGACAACGGAAAAACAGCGTCCGGGCGGGACA ACAGCAGTCGGTCAGGGCAGGGTGGTGGAACTGCGTCGACCAAGAAGCGC AAGAAGGCGATTTTTCCCTGTGCAAACACAACAACAGGTTACATGCACCA GCCCTCCTCGTTCCGCGTACTGCTTGTCTTCCAACCCACTGTTTTCCCAC GTCAGCCGAGGGATGCTGCTTCCTTGGGAAACCCTACGGTTCCTGGATTA TTTTCGTTCTGTGCTCCTTCATGGTGCGTTCGTGGTAGCACTCATCACCC ATCACGGCTGTGCGTGAAATGCCCATTTGTGGAAACCAGGTTGTAGGCAT CTTCCCAGTGGAGGTAACGCACGTACAACCAGCAGCGATCCGAAGCTTTA CGAACAACGTTCTCTGAGTCAGACAATGTTTACAAGGAAAGATTCTCCGC CTGCTGTGACCAGCCAGAGGAATCACGAATATGTGAAGGGTGCCCCCGAG ACTCACTCTCATTTTTGACCTTTCTTCAAACTAGCACGGCCGACCAATGT CGGCCACGCTTGGCAATTCCTCGCCACACTGCAACAAGAACGAAATACCT CCGCTGGTGAACGGTTAATCACCCCTTCAGGAACCCTTACTCGGCAACAG AGAAAGGGAAGAGTATTCTCAAGTACGTGTTGCACAAGGCAAGGTCGGAT TGTTGTTGAAACGCTACTGCTGTCGTAGGCAAAGCGATCAAGTCTCACGG GCAAGGCAGTACAACAGACGGCTCCGTCGCAGTCAATTTCTCGGCAGGCC GTCGAGCACCGAGCAGAACGACTCCCTGTTTGGCCGTTCGGTTCTCGTGA GTCATAACCATGAGCGGCACCCCGATAATTGTCCGAACCACAGGTGCGCC GAGTTTTTCTTGGCGATGCAGAACGCCATGGGGGTACACACGTCGTGGGC TGAGCTCGGTTACGACAGCCTCGTCGCGTGCCGAGAGCACCTTGAAAGGT GATCATGATGTAGATTGGGCGGTGGAGGTTAAGATCGGCACGCCCATGTG TCGTCTTCGCTCGCGTCTGGGCCCCTTTGATAATTAGTAGCTGATACATG CGCTGCCTCTTGTTTCGTATATAATGCATCCGGTGTGTTTATTATAGTCA GGATATTGCTTGTACGCTTGGGCCATGTTGCACAAGATTGATGTCCATCT AGGATTTTACACTCCCGTTAATTTTATGCTTGTCCTTTGTCTTGCGGGCG TGCTACTGCTGTATTCGATGAAATTTACTGTTGTTGAAAACCGATTTTTC CCTGATCGGCCTCTGGATAATTCGAGGTTCGTCATGTCCAAGATCCACCC GCTGGCGTTCGGCAGCAAGCTTGACGGAGCCGTGGATGCTTCCATCTCCG CCCGCCTGCAGTCGTTACAGTTTCTCACCCCGCACGACCTGAACGTCAGC GTTTACGCTCGCGAGGAGACCGTGTTAACCTTGGCACAGGTGCGACAGAA AACCACCTTTTGCATGGCGTTGTTCTAGGATTCGAGTAGATCTCGACCGA TCCAAGTTCGGAGTTTCCAGGTAACTGCCGCGGTATGGGCAACGACAGAG GGTCTCCAGTTCGAGTGCCAAAAAAACATGGAATCTCTGTTTTTTTTTGT TTCAGCAGTTGCGTTGAACGGGCATGTCCAAGGTTGGTGTGTGTAGGGTG TATGCATAGATATCATTGTTCTTTCCTCGGGCGTTGTGGTGATGTGATGA GCCTCACTGCTGCAACGGACGACCACGCACGTGCTGAAAACGTAACTAGG ACAGCCGTGCAAAGTGCACAAGGCCGCGCACGAAAACACGTGTGCCCCAG CTCGCTGCTGTCGGGCCAAGCCCATCCCTTTAGTGGGTGGAGGTTTGGTA ACGGTGCGAGTGCCAGTGGTGCCGGAGGTGTCTTGAAGAGCTGCGTCTTG CGTTTTGCGGAGATTGGGGGCGTTGAGTGCGCTGCTGCTGTGGTTTGAAC GGGACCAGATCACGTCTCGTCGTCAGCTCTTTGTTTTGCGCCGGAAAAAG GAGCTTGAGAATGTGTGGTTGCCTTTGCGGTGTGAGAGAGAGGACGATAG TCCTTAGCCAGGGCTACGCTCGGCTGCCGTGACATGTAGTACCGATTTTA CGAGGACGAGAAATGGTCGGCGGTCAACGTCCACGTGGCCCTTTCCTCCT GCTTGCTGGTGCAACTGAATAGACATTTTATACGCAGCCATTTTGAACGG ATGTTTTGTTAAAATCTTTGTCTCATTTCGCCCCCCCGCCCAACCCCCTT CCCCTCTACTACAACATCTATCCCGCTGAATACGCAGGAGGAATTGCGCA AAATGGGCCGCGGGCGGTGCCCCGGAGACATCGTGTCACGCGTGGTGCGT TGCTGCGATACCCTCTTCGCCCTAATCGATCAGGGCCGTCGCTTCAAGCA AGGGGTCGGACGTGGTGGTGGTGGAGGAGGAGGAGGAGGAGAAGGAGACA GCAATGTTTCATCCTGGCGGCCCGAGCGGGATCCCGCCGGCACCGCGGAT GACTTCTTGCCGGTGTTGATTTACGTGGTGCTGCGGGCGAGAGTGCCGAG GCTTCACTCCATGTGCGAGTACGTCCAGGCGTTTCACAGCCCCGTGGCGC TCATGTCTAGGTAAGGTGCTCTCGGAATCGTGGCAGCCTACATACCTATC TGTAATAGTAGGATGCCCACGCCGCCAGCGGTGTGGAAGCCACTTCAGCA GATCCGCGAAGGCGCGTTTTCGAGCGCGTCGAACGACTGGCGAGAGGTCG TTGGCGTTGACTTGAGCACAGGGCATTCGTTCGGTTCACGAGTACAGTGC AGCGCGTTTTGCGGAAATTGCGACATGGGGGAAGGGCCATATATCAAGCC GAAAGGAAAGGTACAGCAGTAGGATGCTGCTGTTTTAGTACAAGAAGGAT AAAAGGTAGCAGCTCCAGCTCGCTCATTGTTTTGCTTTTCCAATTGCGTG CATCACCACGTGGCTTTCACACGCCGCCTGGGCTTCCGTACTCACCACCT CTTGCTTGTTGCTCGTGCTCGTGTTCGTGCCTAGGCCGGGCTACTGCTTC GTCGCTCTTAGGAGTGCGGTGGAATTCCTGATGACCCTCAACGGAGCTGC GGTGGGCATGTCCGAGCAAGATTTCCGGAGGTAAGGTCTTGTTTGAAAGC GATTATGTTCGTCTAGTATTTTCGCCGCCTGGCATTAACCAGCGGACGAT TCACCCCTCGTTGGTAGGCAGGAACTTGATGTCAGCGTTTTTTCCATGCA TCTCTCCACCTGTCCTTGAGAAGAACGTCTAGTCAATCGAATGCGTTCTT CGCCCTCATGGAGTTATGATCTGGGCTCTACCCTTCCCTCCCGTGTCAAC GTGCTGCTGCCACTGCCGCCGCCGCGTGCGGTGTAACGCTCCCCTGTCTT CAGGCGCGCCTTGGATGCGGCGATCGGGGTAGATGCCGGCTCGTAGACTA CCGCTGGCGCCAATGAAAACCAGCACCCTTTTGTGCCCCAAGAGCGACAA ATCAAATCGTGTTCACTCATTTCGAGGCCCGCGACAAAGGCGTCCTGCGA TTTGGTTTTGAGGGAAGGAATGCGCATTGATGTGGTGTTAAAGCGAAGAG AAGGTAGGGGGGGAACACTCGTGTCTTGCAAGGCTTTTGTTGTTGGCCCA TTGACGGCGTGTCCTCGAGAGGACGGCAGGAGCATTGTTCCAACAGGACC GATCACCGATGGCCGTGTGGGGACAATGCGAAGAGGGAGGGGAGTTTTCG TCTAGAATACAAGTGTGATGTAGGAGGACATGTATAAACGCATATCTCGA ATCGAAGCGGTGTGGATATTTAGCCCCTTATGAGGAAGGAGGTCCATGCG GGTTGTTATATTTAATGGAGGTGGCCTGCAGCACTGCTGCCCCAACTCAC GAACGGAGGGGGGAATATTACCTCTTTTTCACATTTGGCGTCTTGGTGAG ACGTCTGATTGGTGGAAGATGATCCGCGGGTTCAAACCCCGCCACCCACC AAAAAACGGTGGAACCGCCAGAATACGGCGGTGGAAGGAAGCAAAGACAC
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig82:452193..458392+

>mRNA_E-siliculosus-1a_M_contig82.16417.1 ID=mRNA_E-siliculosus-1a_M_contig82.16417.1|Name=mRNA_E-siliculosus-1a_M_contig82.16417.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2778bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig82:452193..458392+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGATGCTTCGCCGGAAGCTATTCTGCATCGAGTGAGAGAGCGCGATGC
GCAGATGTGCGTTCTCCTTCAACGGACCGAGCTCCTGAATCGTGTTCATC
GTGGAGCAATCAGCGAGCTACCACCTTCGCCAGAGGGAATGGGTAGCCGT
GATTCTTTGAAGGCGCGCCTGGCCGTGATTTGTGGATGCCAGGACCAGAT
GGATGCTTCGCCGGAAGCTATTCTGCATCGAGTGAGAGAGCGCGATGCGC
AGATGTGCGTTCTCCTTCAACGGACCGAGCTCCTGAATCGTGTTCATCGT
GGAGCAATCAGCGAGCTACCACCTTCGCCAGAGGGAATGGGTAGCCGTGA
TTCTTTGAAGGCGCGCCTGGCCGTGATTTGTGGATGCCAGGACCAGGCAG
AAACCGTACTCAACGAGGCTGTCCCGCTGCTGCAGCCGCCGCCATCATCT
TCGCCTGTGGCCTCTACACCTGATGCTTACACCAAAGCCATAAGGTCTCT
CCTTTCCACGCCCAAAGCCAACACTGCTGCTACTGCTCGCTCCACGAGAG
CGCCCTCAAACTCCTCGGGACACCCCCCTGTACAATCCGGCGGCCCCCCT
TCCGTCCGCCGTGCCGAGCGAGGAGACGGTGGCAGAAACAGCAGCAGTGC
GGTAACGTATCGCGTGTTCCTGGAACGCTTGACGCGTTCGGAGAGCGAGG
GGTTCGTGGAAGCTATCCGGCTGTTCCTCTTCAGCATCCTTGGGAACGGT
GGCGCCGTCAACCCCGCCGCCGGCCGGCCGCAGGCGTCGAGCAACAGTGA
CATCCGGCGGGAGACGGAAGAGGTGGAGGTCTACGGCTCGTCGTTTCTTT
CGCAGAGGCAGAAACCGTACTCAACGAGGCTGTCCCGCTGCTGCAGCCGC
CGCCATCATCTTCGCCTGTGGCCTCTACACCTGATGCTTACACCAAAGCC
ATAAGGTCTCTCCTTTCCACGCCCAAAGCCAACACTGCTGCTACTGCTCG
CTCCACGAGAGCGCCCTCAAACTCCTCGGGACACCCCCCTGTACAATCCG
GCGGCCCCCCTTCCGTCCGCCGTGCCGAGCGAGGAGACGGTGGCAGAAAC
AGCAGCAGTGCGGTAACGTATCGCGTGTTCCTGGAACGCTTGACGCGTTC
GGAGAGCGAGGGGTTCGTGGAAGCTATCCGGCTGTTCCTCTTCAGCATCC
TTGGGAACGGTGGCGCCGTCAACCCCGCCGCCGGCCGGCCGCAGGCGTCG
AGCAACAGTGACATCCGGCGGGAGACGGAAGAGGTGGAGGTCTACGGCTC
GTCGTTTCTTTCGCAGAGGTGCGCCGAGTTTTTCTTGGCGATGCAGAACG
CCATGGGGGTACACACGTCGTGGGCTGAGCTCGGTTACGACAGCCTCGTC
GCGTGCCGAGAGCACCTTGAAAGGTGCGCCGAGTTTTTCTTGGCGATGCA
GAACGCCATGGGGGTACACACGTCGTGGGCTGAGCTCGGTTACGACAGCC
TCGTCGCGTGCCGAGAGCACCTTGAAAGGTTCGTCATGTCCAAGATCCAC
CCGCTGGCGTTCGGCAGCAAGCTTGACGGAGCCGTGGATGCTTCCATCTC
CGCCCGCCTGCAGTCGTTACAGTTTCTCACCCCGCACGACCTGAACGTCA
GCGTTTACGCTCGCGAGGAGACCGTGTTAACCTTGGCACAGGTTCGTCAT
GTCCAAGATCCACCCGCTGGCGTTCGGCAGCAAGCTTGACGGAGCCGTGG
ATGCTTCCATCTCCGCCCGCCTGCAGTCGTTACAGTTTCTCACCCCGCAC
GACCTGAACGTCAGCGTTTACGCTCGCGAGGAGACCGTGTTAACCTTGGC
ACAGGAGGAATTGCGCAAAATGGGCCGCGGGCGGTGCCCCGGAGACATCG
TGTCACGCGTGGTGCGTTGCTGCGATACCCTCTTCGCCCTAATCGATCAG
GGCCGTCGCTTCAAGCAAGGGGTCGGACGTGGTGGTGGTGGAGGAGGAGG
AGGAGGAGAAGGAGACAGCAATGTTTCATCCTGGCGGCCCGAGCGGGATC
CCGCCGGCACCGCGGATGACTTCTTGCCGGTGTTGATTTACGTGGTGCTG
CGGGCGAGAGTGCCGAGGCTTCACTCCATGTGCGAGTACGTCCAGGCGTT
TCACAGCCCCGTGGCGCTCATGTCTAGGAGGAATTGCGCAAAATGGGCCG
CGGGCGGTGCCCCGGAGACATCGTGTCACGCGTGGTGCGTTGCTGCGATA
CCCTCTTCGCCCTAATCGATCAGGGCCGTCGCTTCAAGCAAGGGGTCGGA
CGTGGTGGTGGTGGAGGAGGAGGAGGAGGAGAAGGAGACAGCAATGTTTC
ATCCTGGCGGCCCGAGCGGGATCCCGCCGGCACCGCGGATGACTTCTTGC
CGGTGTTGATTTACGTGGTGCTGCGGGCGAGAGTGCCGAGGCTTCACTCC
ATGTGCGAGTACGTCCAGGCGTTTCACAGCCCCGTGGCGCTCATGTCTAG
GCCGGGCTACTGCTTCGTCGCTCTTAGGAGTGCGGTGGAATTCCTGATGA
CCCTCAACGGAGCTGCGGTGGGCATGTCCGAGCAAGATTTCCGGAGGCCG
GGCTACTGCTTCGTCGCTCTTAGGAGTGCGGTGGAATTCCTGATGACCCT
CAACGGAGCTGCGGTGGGCATGTCCGAGCAAGATTTCCGGAGGCGCGCCT
TGGATGCGGCGATCGGGGTAGATGCCGGCTCGTAGGCGCGCCTTGGATGC
GGCGATCGGGGTAGATGCCGGCTCGTAG
back to top