mRNA_E-siliculosus-1a_M_contig82.16374.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig82.16374.1
Unique NamemRNA_E-siliculosus-1a_M_contig82.16374.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig82.16374.1 vs. uniprot
Match: D8LQ51_ECTSI (Hydroxymethylglutaryl-CoA lyase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ51_ECTSI)

HSP 1 Score: 635 bits (1638), Expect = 2.430e-227
Identity = 328/335 (97.91%), Postives = 332/335 (99.10%), Query Frame = 1
Query:   55 MIGSHRCRRAFASLSATRASIASPTHRGLKCGAIRWPKSVSLVEVGPRDGLQNELSTVPTEVKVELIDRLAAAGCKTIEAASFVSPKWVPQMADGGQVLANLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSIVESLERFKPVMEKAKVAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQALANILIALEEGITVLDTSVSGLGGCPYAAGASGNVATEDVVYMLDGMGINTGVDLDLLLDTSLYISDKLGRPPQSRVARAMLAKRS 1059
            MIGSHRCRRAFASLSATRASIASPTHRGLKCGAIRWPKSVSLVEVGPRDGLQNELSTVPTEVKVELIDRLAAAGCK IEAASFVSPKWVPQMADG QVLANLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFS+ANINCSIVESLERFKPVMEKAKVAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLE+LREAGVPLEK+AVHFHDTYGQALANIL+ALEEGITVLDTSVSGLGGCPYA GASGNVATEDVVYMLDGMGINTGVDLDLLLDTSLYISDKLGRPPQSRVARAMLAKRS
Sbjct:    1 MIGSHRCRRAFASLSATRASIASPTHRGLKCGAIRWPKSVSLVEVGPRDGLQNELSTVPTEVKVELIDRLAAAGCKAIEAASFVSPKWVPQMADGDQVLANLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSSANINCSIVESLERFKPVMEKAKVAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLETLREAGVPLEKVAVHFHDTYGQALANILVALEEGITVLDTSVSGLGGCPYAPGASGNVATEDVVYMLDGMGINTGVDLDLLLDTSLYISDKLGRPPQSRVARAMLAKRS 335          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16374.1 vs. uniprot
Match: UPI0016659C4E (hydroxymethylglutaryl-CoA lyase n=1 Tax=Tistrella bauzanensis TaxID=657419 RepID=UPI0016659C4E)

HSP 1 Score: 411 bits (1057), Expect = 1.500e-139
Identity = 207/298 (69.46%), Postives = 244/298 (81.88%), Query Frame = 1
Query:  163 PKSVSLVEVGPRDGLQNELSTVPTEVKVELIDRLAAAGCKTIEAASFVSPKWVPQMADGGQVLANLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSIVESLERFKPVMEKAKVAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQALANILIALEEGITVLDTSVSGLGGCPYAAGASGNVATEDVVYMLDGMGINTGVDLDLLLDTSLYISDKLGRPPQSRVARAMLAKR 1056
            P  V +VEVG RDGLQNE + VPT VK+ LI++LAAAG   +EA +FVSPKWVPQMAD  +V+A L R PG +Y  LTPN++GLEAAL AGADEVAVF AASEAFS  NINC+I ESL+RF+PV++ A+ AG  VRGYVSCVLGCPYEG +AP  VAEV+ +LLDMGCY VSLGDTIG GTAG    L+E++  A VP E++AVHFHDTYGQALANIL ALEEGI V+D+SV+GLGGCPYA GA+GNVATEDV+YML GMGINTGVDLD +L+   +ISD+LGRPP  RV+RAM A+R
Sbjct:    4 PSDVRIVEVGARDGLQNEKAVVPTAVKIALIEQLAAAGLPAVEATAFVSPKWVPQMADHAEVMAGLTRRPGTRYPVLTPNIKGLEAALAAGADEVAVFGAASEAFSKRNINCTIAESLDRFRPVVDAARAAGAEVRGYVSCVLGCPYEGEIAPEKVAEVSKALLDMGCYEVSLGDTIGVGTAGRVHRLIETV-SAVVPRERLAVHFHDTYGQALANILAALEEGIAVVDSSVAGLGGCPYAKGATGNVATEDVLYMLHGMGINTGVDLDAVLEAGWFISDQLGRPPVGRVSRAMRARR 300          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16374.1 vs. uniprot
Match: UPI0004212E15 (hydroxymethylglutaryl-CoA lyase n=1 Tax=Azospirillum halopraeferens TaxID=34010 RepID=UPI0004212E15)

HSP 1 Score: 405 bits (1042), Expect = 2.450e-137
Identity = 202/296 (68.24%), Postives = 238/296 (80.41%), Query Frame = 1
Query:  154 IRWPKSVSLVEVGPRDGLQNELSTVPTEVKVELIDRLAAAGCKTIEAASFVSPKWVPQMADGGQVLANLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSIVESLERFKPVMEKAKVAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQALANILIALEEGITVLDTSVSGLGGCPYAAGASGNVATEDVVYMLDGMGINTGVDLDLLLDTSLYISDKLGRPPQSRVARA 1041
            +R P  V +VEVGPRDGLQNE + VPT VKVEL+DRL+AAG   +EA SFVSPKWVPQMAD  +V+  + R PG +YA LTPNL+GLE ALEA ADEVAVF AASE+FS  NINCSI ESLERF PVME+A+ AG+PVRGYVSCVLGCPYEG +AP AVA VA  L++MGCY VSLGDTIG GT G    ++ ++ E  VP EK+AVHFHDTYGQALANIL ALE G+ V+D+SV+GLGGCPYA GASGNVA+EDV+YML+G+G+ TGVDLD L+    +I + LGRP  S+VARA
Sbjct:    1 MRIPARVRMVEVGPRDGLQNEKTMVPTAVKVELVDRLSAAGLPVVEAGSFVSPKWVPQMADSAEVMQAIARRPGTRYAVLTPNLKGLEGALEARADEVAVFGAASESFSRKNINCSIAESLERFAPVMERARAAGVPVRGYVSCVLGCPYEGEIAPAAVAGVAARLMEMGCYEVSLGDTIGTGTPGKAQAMIAAVAER-VPPEKLAVHFHDTYGQALANILAALEMGVAVVDSSVAGLGGCPYAKGASGNVASEDVLYMLNGLGVETGVDLDALIAAGAFIGEALGRPTASKVARA 295          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16374.1 vs. uniprot
Match: G7Z9X9_AZOL4 (Hydroxymethylglutaryl-CoA lyase n=12 Tax=Azospirillum TaxID=191 RepID=G7Z9X9_AZOL4)

HSP 1 Score: 405 bits (1040), Expect = 4.920e-137
Identity = 203/293 (69.28%), Postives = 237/293 (80.89%), Query Frame = 1
Query:  163 PKSVSLVEVGPRDGLQNELSTVPTEVKVELIDRLAAAGCKTIEAASFVSPKWVPQMADGGQVLANLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSIVESLERFKPVMEKAKVAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQALANILIALEEGITVLDTSVSGLGGCPYAAGASGNVATEDVVYMLDGMGINTGVDLDLLLDTSLYISDKLGRPPQSRVARA 1041
            PK V +VEVGPRDGLQNE S VPT VKVEL+DRL+ AG   +EAASFVSPKWVPQM D  +VLA + R PGV+YAALTPNL+GLE AL A ADEVAVF AASE+FS  NINCSI ESL+RF PVME+AK AG+PVRGYVSCVLGCPYEG +AP AVA+VA  L  MGCY +SLGDTIG GT      ++ ++ E  VP+EK+AVHFHDTYGQALANIL AL+ G+ V+D+SV+GLGGCPYA GASGNVA+EDV+YML+G+GI TGVDLD L+    +I D +GRP  S+VARA
Sbjct:    4 PKFVRMVEVGPRDGLQNEKSMVPTAVKVELVDRLSDAGLSVVEAASFVSPKWVPQMGDSAEVLAGIARKPGVRYAALTPNLKGLEGALAAKADEVAVFGAASESFSRKNINCSIAESLDRFSPVMEQAKAAGVPVRGYVSCVLGCPYEGEIAPRAVADVAERLFAMGCYEISLGDTIGTGTPTKAQAMIAAVAER-VPVEKIAVHFHDTYGQALANILAALQMGVAVVDSSVAGLGGCPYAKGASGNVASEDVLYMLNGLGIETGVDLDKLIAAGAFIGDAIGRPTASKVARA 295          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16374.1 vs. uniprot
Match: A0A162KV33_9PROT (Hydroxymethylglutaryl-CoA lyase n=3 Tax=Tistrella TaxID=171436 RepID=A0A162KV33_9PROT)

HSP 1 Score: 404 bits (1039), Expect = 8.030e-137
Identity = 201/297 (67.68%), Postives = 238/297 (80.13%), Query Frame = 1
Query:  163 PKSVSLVEVGPRDGLQNELSTVPTEVKVELIDRLAAAGCKTIEAASFVSPKWVPQMADGGQVLANLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSIVESLERFKPVMEKAKVAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQALANILIALEEGITVLDTSVSGLGGCPYAAGASGNVATEDVVYMLDGMGINTGVDLDLLLDTSLYISDKLGRPPQSRVARAMLAK 1053
            P  V +VEVG RDGLQNE   VPT VK+ELI+RLAAAG   +EA +FVSPKWVPQMAD  +V+  L R PG +Y  LTPNL+GLE+ALE GADEVAVF AASEAFS  NINC+I ESLERF+PV+E+A+ AG  VRGYVSCVLGCPYEG + P  VAEV+ +L +MGCY VSLGDTIG GTAG    L++++  A VP +++AVHFHDTYGQALANIL ALEEGI V+D SV+GLGGCPYA GA+GNVATEDV+YML+GMGI TG+D D +L    +ISD+LGRPP  RV+RA+ AK
Sbjct:    4 PSEVRIVEVGARDGLQNEKEVVPTAVKIELIERLAAAGLPAVEATAFVSPKWVPQMADHAEVMRGLTRRPGTRYPVLTPNLKGLESALEVGADEVAVFGAASEAFSKRNINCTIAESLERFRPVVERAREAGAQVRGYVSCVLGCPYEGEIDPAKVAEVSKALYEMGCYEVSLGDTIGTGTAGKVKTLIDTV-SAVVPRDRLAVHFHDTYGQALANILAALEEGIAVVDASVAGLGGCPYAKGATGNVATEDVLYMLNGMGIRTGIDFDAVLQAGWFISDQLGRPPAGRVSRALRAK 299          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16374.1 vs. uniprot
Match: A0A1Y5SIC2_9PROT (Hydroxymethylglutaryl-CoA lyase n=1 Tax=Oceanibacterium hippocampi TaxID=745714 RepID=A0A1Y5SIC2_9PROT)

HSP 1 Score: 403 bits (1035), Expect = 3.240e-136
Identity = 201/298 (67.45%), Postives = 235/298 (78.86%), Query Frame = 1
Query:  160 WPKSVSLVEVGPRDGLQNELSTVPTEVKVELIDRLAAAGCKTIEAASFVSPKWVPQMADGGQVLANLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSIVESLERFKPVMEKAKVAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQALANILIALEEGITVLDTSVSGLGGCPYAAGASGNVATEDVVYMLDGMGINTGVDLDLLLDTSLYISDKLGRPPQSRVARAMLAK 1053
            WP  V + EVGPRDGLQNE   V   VK EL+DRL AAG  T+EAASFVSPKWVPQMA   +V+A + R PG +Y ALTPN+RG EAA EAG DEVAVFAAASE FS  NINCS+ ESLE F+PV+E AK AGLPVRGYVSCVLGCP++G V PG VA VA +L  MGCY VSLGDTIG GT      +LE++    +P+EK+ VH+HDTYGQALANIL +LE GI  +D+SV+GLGGCPYA GA+GNVATEDVVYMLDG+GI TG+DL+ L+ T+ +ISD+LGRPP SRVARAM A+
Sbjct:    3 WPTRVRMFEVGPRDGLQNEKQEVSPAVKAELVDRLVAAGIGTVEAASFVSPKWVPQMAGSAEVMAAIHRVPGARYTALTPNMRGFEAAREAGVDEVAVFAAASEGFSRKNINCSVAESLEMFRPVVEAAKAAGLPVRGYVSCVLGCPFDGDVPPGDVARVAAALYGMGCYEVSLGDTIGVGTPARARAMLEAVA-GDIPVEKIGVHYHDTYGQALANILASLEFGIATIDSSVAGLGGCPYAPGATGNVATEDVVYMLDGLGIETGIDLEALVRTAWWISDRLGRPPVSRVARAMKAR 299          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16374.1 vs. uniprot
Match: A0A2U1VHB5_9PROT (Hydroxymethylglutaryl-CoA lyase n=1 Tax=Azospirillum sp. TSO35-2 TaxID=716796 RepID=A0A2U1VHB5_9PROT)

HSP 1 Score: 402 bits (1034), Expect = 3.990e-136
Identity = 201/296 (67.91%), Postives = 238/296 (80.41%), Query Frame = 1
Query:  154 IRWPKSVSLVEVGPRDGLQNELSTVPTEVKVELIDRLAAAGCKTIEAASFVSPKWVPQMADGGQVLANLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSIVESLERFKPVMEKAKVAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQALANILIALEEGITVLDTSVSGLGGCPYAAGASGNVATEDVVYMLDGMGINTGVDLDLLLDTSLYISDKLGRPPQSRVARA 1041
            ++ P  V +VEVGPRDGLQNE + VPT VKVEL+DRL+AAG   +EAASFVSPKWVPQM D   VLA + R PGV+YAALTPNL+GLE AL A ADEVAVF AASE+FS  NINCSI ESL+RF PVME+A+  GLPVRGY+SCVLGCPYEG +AP AVAEVA  L  MGCY +SLGDTIG GT      ++ ++ E  VP++K+AVHFHDTYGQALANIL AL+ G+ V+D+SV+GLGGCPYA GASGNVA+EDV+YML+G+GI TGVDLD L+    +ISD +GRP  S+VARA
Sbjct:    1 MQLPNVVRMVEVGPRDGLQNEKTMVPTAVKVELVDRLSAAGLGVVEAASFVSPKWVPQMGDSADVLAGITRKPGVRYAALTPNLKGLEGALAAKADEVAVFGAASESFSQKNINCSIAESLDRFAPVMERARAEGLPVRGYISCVLGCPYEGEIAPKAVAEVAERLFAMGCYEISLGDTIGTGTPAKAQAMITAVAER-VPMDKIAVHFHDTYGQALANILAALQMGVAVVDSSVAGLGGCPYAKGASGNVASEDVLYMLNGLGIETGVDLDRLIAAGAFISDAIGRPTASKVARA 295          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16374.1 vs. uniprot
Match: A0A6A5L0Y2_LUPAL (Hydroxymethylglutaryl-CoA lyase, mitochondrial n=14 Tax=cellular organisms TaxID=131567 RepID=A0A6A5L0Y2_LUPAL)

HSP 1 Score: 402 bits (1032), Expect = 8.020e-136
Identity = 201/293 (68.60%), Postives = 238/293 (81.23%), Query Frame = 1
Query:  163 PKSVSLVEVGPRDGLQNELSTVPTEVKVELIDRLAAAGCKTIEAASFVSPKWVPQMADGGQVLANLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSIVESLERFKPVMEKAKVAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQALANILIALEEGITVLDTSVSGLGGCPYAAGASGNVATEDVVYMLDGMGINTGVDLDLLLDTSLYISDKLGRPPQSRVARA 1041
            PK V +VEVGPRDGLQNE + VPT VKVEL++RL+ AG   +EAASFVSPKWVPQM D  +VLA + R PGV+YAALTPNL+GLE AL A ADEVAVF AASE+FS  NINCSI ESL+RF PVME+AK AG+PVRGYVSCVLGCPYEG +AP AVA+VA  L  MGCY +SLGDTIG GT      ++ ++ E  VP++K+AVHFHDTYGQALANIL AL+ G+ V+D+SV+GLGGCPYA GASGNVA+EDV+YML+G+GI TGVDLD L+    +ISD +GRP  S+VARA
Sbjct:    4 PKFVRMVEVGPRDGLQNEKTMVPTAVKVELVNRLSDAGLSVVEAASFVSPKWVPQMGDSAEVLAGIARKPGVRYAALTPNLKGLEGALAAKADEVAVFGAASESFSQKNINCSIAESLDRFAPVMEQAKAAGVPVRGYVSCVLGCPYEGEIAPRAVADVAERLFAMGCYEISLGDTIGTGTPTKAQAMIAAVAER-VPVDKIAVHFHDTYGQALANILAALQMGVAVVDSSVAGLGGCPYAKGASGNVASEDVLYMLNGLGIETGVDLDRLIAAGAFISDAIGRPTASKVARA 295          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16374.1 vs. uniprot
Match: A0A557SLD4_9RHOO (Hydroxymethylglutaryl-CoA lyase n=5 Tax=Denitromonas TaxID=139331 RepID=A0A557SLD4_9RHOO)

HSP 1 Score: 401 bits (1031), Expect = 1.670e-135
Identity = 204/298 (68.46%), Postives = 238/298 (79.87%), Query Frame = 1
Query:  163 PKSVSLVEVGPRDGLQNELSTVPTEVKVELIDRLAAAGCKTIEAASFVSPKWVPQMADGGQVLANLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSIVESLERFKPVMEKAKVAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQALANILIALEEGITVLDTSVSGLGGCPYAAGASGNVATEDVVYMLDGMGINTGVDLDLLLDTSLYISDKLGRPPQSRVARAMLAKR 1056
            P  V +V+VGPRDGLQNE   + TEVKVELI RL AAG KTIEAASFVSPKWVPQMAD  +V+A + R  GV Y  LTPNL+G EAAL AGA EVAVF AASE+FS  NINCSI ESL RF+PVM  A+ AG+ VRGYVSCVLGCPYEG +AP AVAEVA +L DMGCY +SLGDTIG GT G T  +LE++  A V ++K+A H+HDTYGQALANI  +LE G+ V D SV GLGGCPYAAGASGNVATEDVVYML+G+G+ TG+DL+ L+DT+ +IS +L R P S+VARA+LAKR
Sbjct:   10 PTQVRIVDVGPRDGLQNEKQIISTEVKVELIARLGAAGLKTIEAASFVSPKWVPQMADNSEVMARINRLSGVGYPVLTPNLKGFEAALAAGATEVAVFGAASESFSQKNINCSIAESLARFEPVMAAAQAAGVKVRGYVSCVLGCPYEGEIAPAAVAEVAATLFDMGCYEISLGDTIGTGTPGKTQRMLEAVA-ARVAIDKLAGHYHDTYGQALANIYASLEMGVAVFDASVGGLGGCPYAAGASGNVATEDVVYMLNGLGLETGIDLNTLVDTAAWISAQLNREPSSKVARAVLAKR 306          
BLAST of mRNA_E-siliculosus-1a_M_contig82.16374.1 vs. uniprot
Match: D3NZD1_AZOS1 (Hydroxymethylglutaryl-CoA lyase n=5 Tax=Azospirillum TaxID=191 RepID=D3NZD1_AZOS1)

HSP 1 Score: 400 bits (1028), Expect = 3.240e-135
Identity = 202/293 (68.94%), Postives = 233/293 (79.52%), Query Frame = 1
Query:  163 PKSVSLVEVGPRDGLQNELSTVPTEVKVELIDRLAAAGCKTIEAASFVSPKWVPQMADGGQVLANLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSIVESLERFKPVMEKAKVAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQALANILIALEEGITVLDTSVSGLGGCPYAAGASGNVATEDVVYMLDGMGINTGVDLDLLLDTSLYISDKLGRPPQSRVARA 1041
            PK V +VEVGPRDGLQNE S VPT VKVEL+DRL+  G   IEAASFVSPKWVP+M D  +VLA + R PGV+YAALTPNL+GLE A  A ADEVAVF AASE+FS  NINCSI ESL+RF PVME+AK AG+PVRGYVSCVLGCPYEG +AP AVAEVA  L  MGCY +SLGDTIG GT      ++ ++ E  VP+EK+AVHFHDTYGQALANIL AL  G+ V+D+SV+GLGGCPYA GASGNVA+EDV+YMLDG+GI TGVDLD L+    +ISD + RP  S+V RA
Sbjct:    4 PKFVRMVEVGPRDGLQNETSMVPTAVKVELVDRLSDTGLSVIEAASFVSPKWVPRMGDSAEVLAGIARKPGVRYAALTPNLKGLEDAFAARADEVAVFGAASESFSQKNINCSIAESLDRFAPVMERAKAAGVPVRGYVSCVLGCPYEGEIAPQAVAEVAERLFAMGCYEISLGDTIGTGTPTKAQAMIAAVAER-VPVEKVAVHFHDTYGQALANILAALHMGVAVIDSSVAGLGGCPYAKGASGNVASEDVLYMLDGLGIETGVDLDRLIAAGAFISDAIDRPTASKVGRA 295          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig82.16374.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ51_ECTSI2.430e-22797.91Hydroxymethylglutaryl-CoA lyase n=2 Tax=Ectocarpus... [more]
UPI0016659C4E1.500e-13969.46hydroxymethylglutaryl-CoA lyase n=1 Tax=Tistrella ... [more]
UPI0004212E152.450e-13768.24hydroxymethylglutaryl-CoA lyase n=1 Tax=Azospirill... [more]
G7Z9X9_AZOL44.920e-13769.28Hydroxymethylglutaryl-CoA lyase n=12 Tax=Azospiril... [more]
A0A162KV33_9PROT8.030e-13767.68Hydroxymethylglutaryl-CoA lyase n=3 Tax=Tistrella ... [more]
A0A1Y5SIC2_9PROT3.240e-13667.45Hydroxymethylglutaryl-CoA lyase n=1 Tax=Oceanibact... [more]
A0A2U1VHB5_9PROT3.990e-13667.91Hydroxymethylglutaryl-CoA lyase n=1 Tax=Azospirill... [more]
A0A6A5L0Y2_LUPAL8.020e-13668.60Hydroxymethylglutaryl-CoA lyase, mitochondrial n=1... [more]
A0A557SLD4_9RHOO1.670e-13568.46Hydroxymethylglutaryl-CoA lyase n=5 Tax=Denitromon... [more]
D3NZD1_AZOS13.240e-13568.94Hydroxymethylglutaryl-CoA lyase n=5 Tax=Azospirill... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig82contigE-siliculosus-1a_M_contig82:113230..116162 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1008
Model size1395
Exons5
Ec32 orthologEc-26_006120.1
Ec32 ortholog descriptionHydroxymethylglutaryl-CoA lyase
Hectar predicted targeting categorymitochondrion
BRITEko00000,ko00001,ko00002,ko01000
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.E
EC4.1.3.4
EggNOG OGsCOG0119@1,KOG2368@2759
EggNOG free text desc.hydroxymethylglutaryl-CoA lyase activity
KEGG ModuleM00036,M00088
KEGG Pathwayko00072,ko00280,ko00281,ko00650,ko01100,ko04146,map00072,map00280,map00281,map00650,map01100,map04146
KEGG ReactionR01360,R08090
KEGG koko:K01640
KEGG rclassRC00502,RC00503,RC01118,RC01946
Seed eggNOG ortholog2880.D8LQ51
Seed ortholog evalue1.2e-180
Seed ortholog score639.0
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936249.415706-UTR-E-siliculosus-1a_M_contig82:113229..1132831622936249.415706-UTR-E-siliculosus-1a_M_contig82:113229..113283Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig82 113230..113283 +
1696250991.1403625-UTR-E-siliculosus-1a_M_contig82:113229..1132831696250991.1403625-UTR-E-siliculosus-1a_M_contig82:113229..113283Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig82 113230..113283 +
1622936249.5244472-UTR-E-siliculosus-1a_M_contig82:115829..1161621622936249.5244472-UTR-E-siliculosus-1a_M_contig82:115829..116162Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig82 115830..116162 +
1696250991.2121644-UTR-E-siliculosus-1a_M_contig82:115829..1161621696250991.2121644-UTR-E-siliculosus-1a_M_contig82:115829..116162Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig82 115830..116162 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936249.4324217-CDS-E-siliculosus-1a_M_contig82:113283..1134721622936249.4324217-CDS-E-siliculosus-1a_M_contig82:113283..113472Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 113284..113472 +
1696250991.152117-CDS-E-siliculosus-1a_M_contig82:113283..1134721696250991.152117-CDS-E-siliculosus-1a_M_contig82:113283..113472Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 113284..113472 +
1622936249.4472573-CDS-E-siliculosus-1a_M_contig82:113699..1139001622936249.4472573-CDS-E-siliculosus-1a_M_contig82:113699..113900Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 113700..113900 +
1696250991.1610405-CDS-E-siliculosus-1a_M_contig82:113699..1139001696250991.1610405-CDS-E-siliculosus-1a_M_contig82:113699..113900Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 113700..113900 +
1622936249.4676142-CDS-E-siliculosus-1a_M_contig82:114424..1146161622936249.4676142-CDS-E-siliculosus-1a_M_contig82:114424..114616Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 114425..114616 +
1696250991.1698682-CDS-E-siliculosus-1a_M_contig82:114424..1146161696250991.1698682-CDS-E-siliculosus-1a_M_contig82:114424..114616Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 114425..114616 +
1622936249.4846182-CDS-E-siliculosus-1a_M_contig82:114827..1150221622936249.4846182-CDS-E-siliculosus-1a_M_contig82:114827..115022Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 114828..115022 +
1696250991.180074-CDS-E-siliculosus-1a_M_contig82:114827..1150221696250991.180074-CDS-E-siliculosus-1a_M_contig82:114827..115022Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 114828..115022 +
1622936249.503143-CDS-E-siliculosus-1a_M_contig82:115598..1158291622936249.503143-CDS-E-siliculosus-1a_M_contig82:115598..115829Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 115599..115829 +
1696250991.2003293-CDS-E-siliculosus-1a_M_contig82:115598..1158291696250991.2003293-CDS-E-siliculosus-1a_M_contig82:115598..115829Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig82 115599..115829 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig82.16374.1prot_E-siliculosus-1a_M_contig82.16374.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig82 113284..115829 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig82.16374.1

>prot_E-siliculosus-1a_M_contig82.16374.1 ID=prot_E-siliculosus-1a_M_contig82.16374.1|Name=mRNA_E-siliculosus-1a_M_contig82.16374.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=336bp
MIGSHRCRRAFASLSATRASIASPTHRGLKCGAIRWPKSVSLVEVGPRDG
LQNELSTVPTEVKVELIDRLAAAGCKTIEAASFVSPKWVPQMADGGQVLA
NLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSAANINCSI
VESLERFKPVMEKAKVAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLL
DMGCYSVSLGDTIGAGTAGSTLVLLESLREAGVPLEKMAVHFHDTYGQAL
ANILIALEEGITVLDTSVSGLGGCPYAAGASGNVATEDVVYMLDGMGINT
GVDLDLLLDTSLYISDKLGRPPQSRVARAMLAKRS*
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mRNA from alignment at E-siliculosus-1a_M_contig82:113230..116162+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig82.16374.1 ID=mRNA_E-siliculosus-1a_M_contig82.16374.1|Name=mRNA_E-siliculosus-1a_M_contig82.16374.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2933bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig82:113230..116162+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CAAACCACATCCTGTCCAAAAGCTCCCTGTCGATCGAGTGCATGGTACCG TAGGATGATCGGTTCTCACCGCTGTCGGCGAGCCTTTGCGTCCCTCAGTG CAACGCGCGCAAGCATAGCGTCACCGACACATCGAGGCCTAAAATGCGGC GCAATTAGGTGGCCCAAGTCCGTTTCCCTCGTGGAAGTGGGCCCCAGAGA CGGACTGCAGAATGAGCTCTCCACCGTGCCAACTGAGGTTAAGGTGAGAC AGTAGTGACGACAACGGCACGGTGTAGCCCCGACGCCTTGTTTTTCATTG CTCATGCCACAATATGTATAGATACATGGGCACATCTCTCGTCTATTTTT TCTTGTATGTTGTGTCTGCAGTCTCCCCGCAAGTTGAAGTGAAGCAGCAA GAATGCTCCGTGACTCTGTCGGCAACATGCCTGCTGTCCCTCTTGGCTGT TGCATGCACGCTCAACGCAGGTGGAATTGATTGATCGTTTGGCAGCGGCT GGGTGTAAAACTATCGAAGCTGCATCTTTCGTCAGCCCCAAGTGGGTTCC ACAGATGGCTGACGGCGGCCAAGTCCTGGCCAATCTTGGAAGAGCGCCGG GAGTCAAGTATGCGGCCCTGACGCCCAACCTACGGGGGCTTGAGGCAGCC CTCGAGGCTGGTGCTGATGAGGTGCAGTTGATCGGGGCCCGCGGTCTCTC TTTCGTGCCGTTGGTTCAACCTGGCTGCATAAGCCATGGTTGTACGGCTG CTTGCGCTGGCCTCCTTGTCTGTAACGGCAACTTGGTAGCAAGTGCTTCG CGGAACACAGCAGTCTCCGATCACAAGTTATTAGACACGCACGGAGCATC CACGATCGGGTACCATGTCTAGATGACGCGCACCACAAGGCGGAGGGGCT GAAAGGGAGATAAACTGACAGACGGTGACGGTAGCGCTGATACAGCCCAG GTTGCACAAGGTCGTTTCTCTCGCCCCTCCCAAATCAAGCACCCAGCACT TCCAGCACCACCTCTAGACAGAGCATGACTCAACCAGCATTCAATCAGGC GCAATCTAAGATTTCGACAAACAGGCAAAACCTCCGGTCGCCCTCTCTCT CGATAGTCCTACGTTGGCTCGCGGCTGCCCTCTGTAATCGAAAACGTTCT GTACATGGATACTTACGGCACCTGTCATTGCTGTTCCTGCGACAGGTTGC GGTTTTTGCTGCAGCGTCAGAGGCATTCAGTGCTGCTAACATCAACTGCT CAATTGTTGAGAGCTTAGAACGCTTCAAGCCGGTCATGGAGAAGGCCAAG GTAGCGGGGTTGCCAGTACGGGGCTACGTGTCGTGCGTACTCGGGTGCCC GTACGAGGGGCGAGTGGCTCCAGGTGCCGTTGCGGAGGTTAGTGGATTGG CTTACCTGCTGTGCCGAGTCCCTGGTACACGAGAGTTGAAGGGCAAAGCA ATCGTTGATTGGACGGGGTAGGTTTTGTTCACCAAAGCACTCGTCTACTG GAGCGAAATAGTATAGTGGCAGCACGATCGAATCATGTCCAAGTGGTCAC CCGTCGTGGCGGCCGCTGATCTGGTGGTCTCACGATTCCGCGGAATAGGT GGCGACTTCCCTGTTGGACATGGGATGCTACTCGGTGTCACTGGGAGACA CCATCGGCGCGGGCACAGCTGGCAGTACCCTTGTCCTCCTGGAAAGCTTG AGAGAAGCGGGAGTGCCGCTGGAGAAAATGGCAGTGCACTTCCACGACAC ATACGGGCAGGCCTTGGCTAACATCCTCATTGCGCTGGAGGAGGTGAGGG GTCATTAATCCATGTCCACAACGCTGCTCTTGACGCCGGTTGCCGTGCGT GTGACTGCCGCATAGTGGGTTTAAAACGGTGTTCGGAAATTCATATCGTA TTTTTGTGAGGGATCGGTGGTGTTGCCATGCTGACGATCTAGCAAGTTCA GTATCTTGAAAACACACACCCTACACAAAACCACACCCGGGCGTGGTAGT ATGTTTGCGGTGCAACCTAAGCCCAAAACATCAAACGACTCTCAGATCAA GTAAGTAGGGCGACTAGATTCAAATTCCATACCCCGAACACAACATACTA GCACACCCGGTTTGATATTTCCAGGCGCCAGAATGTGATCACCGGGGTAC GGATGTGTCGTGTGCGGTATTTCGGAGCAAGATTCTGAGATCTTCTTTTG AACCATGTTTCAGAAGAATAGACGCAAACAAGTTGTATGGATTACCTTGC AGGGTCCTAGTCGCCGTCTGCCAAGGATAGTGCTGCTTTGAACCCCCGAT TTCCCGCCAACACTCGCCGACTGCAAGCCCCGAATCCCCCGCTCCTATTC ATGCTTTGTTTTGCTCCAGGGTATTACCGTGTTGGACACGTCGGTTTCTG GCCTAGGGGGTTGCCCATACGCTGCCGGGGCAAGCGGCAACGTCGCAACA GAAGACGTGGTGTACATGTTGGATGGAATGGGAATCAACACGGGCGTTGA CCTAGATTTGTTGTTAGACACTTCTCTGTACATTTCAGATAAGCTGGGTA GGCCGCCCCAGTCCAGGGTAGCGAGAGCAATGTTGGCCAAGCGAAGTTGA CTTTTGGCAACGAGTGACACCCTATGTGTTTGTCCGCGATTTGTACATAG CACATGTTACTACGTTGATACCTATTTTGTGTTCGGCCGCCCTTTTGTCG TCTCTATCGAGCTGAACCGATTACTACGCACCCCGGAATCGTATATGTAG TGTTGAGGAAGCAGACACGCGCCTTCTTCATGTTCCTTCCCTTGACGAGG GTCCTTGAGGACTTAGTCGCTGCGTGTCAAGTTCGGAACATTCGAGTTTG GAGTCGAGCGCGCATGGTGTGTTCTACATGACAACGAACGAGACGTGCGC GTTGTGATGTCGCTGCATGTGTTTATTGCCGAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig82:113230..116162+

>mRNA_E-siliculosus-1a_M_contig82.16374.1 ID=mRNA_E-siliculosus-1a_M_contig82.16374.1|Name=mRNA_E-siliculosus-1a_M_contig82.16374.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2016bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig82:113230..116162+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGATCGGTTCTCACCGCTGTCGGCGAGCCTTTGCGTCCCTCAGTGCAAC
GCGCGCAAGCATAGCGTCACCGACACATCGAGGCCTAAAATGCGGCGCAA
TTAGGTGGCCCAAGTCCGTTTCCCTCGTGGAAGTGGGCCCCAGAGACGGA
CTGCAGAATGAGCTCTCCACCGTGCCAACTGAGGTTAAGATGATCGGTTC
TCACCGCTGTCGGCGAGCCTTTGCGTCCCTCAGTGCAACGCGCGCAAGCA
TAGCGTCACCGACACATCGAGGCCTAAAATGCGGCGCAATTAGGTGGCCC
AAGTCCGTTTCCCTCGTGGAAGTGGGCCCCAGAGACGGACTGCAGAATGA
GCTCTCCACCGTGCCAACTGAGGTTAAGGTGGAATTGATTGATCGTTTGG
CAGCGGCTGGGTGTAAAACTATCGAAGCTGCATCTTTCGTCAGCCCCAAG
TGGGTTCCACAGATGGCTGACGGCGGCCAAGTCCTGGCCAATCTTGGAAG
AGCGCCGGGAGTCAAGTATGCGGCCCTGACGCCCAACCTACGGGGGCTTG
AGGCAGCCCTCGAGGCTGGTGCTGATGAGGTGGAATTGATTGATCGTTTG
GCAGCGGCTGGGTGTAAAACTATCGAAGCTGCATCTTTCGTCAGCCCCAA
GTGGGTTCCACAGATGGCTGACGGCGGCCAAGTCCTGGCCAATCTTGGAA
GAGCGCCGGGAGTCAAGTATGCGGCCCTGACGCCCAACCTACGGGGGCTT
GAGGCAGCCCTCGAGGCTGGTGCTGATGAGGTTGCGGTTTTTGCTGCAGC
GTCAGAGGCATTCAGTGCTGCTAACATCAACTGCTCAATTGTTGAGAGCT
TAGAACGCTTCAAGCCGGTCATGGAGAAGGCCAAGGTAGCGGGGTTGCCA
GTACGGGGCTACGTGTCGTGCGTACTCGGGTGCCCGTACGAGGGGCGAGT
GGCTCCAGGTGCCGTTGCGGAGGTTGCGGTTTTTGCTGCAGCGTCAGAGG
CATTCAGTGCTGCTAACATCAACTGCTCAATTGTTGAGAGCTTAGAACGC
TTCAAGCCGGTCATGGAGAAGGCCAAGGTAGCGGGGTTGCCAGTACGGGG
CTACGTGTCGTGCGTACTCGGGTGCCCGTACGAGGGGCGAGTGGCTCCAG
GTGCCGTTGCGGAGGTGGCGACTTCCCTGTTGGACATGGGATGCTACTCG
GTGTCACTGGGAGACACCATCGGCGCGGGCACAGCTGGCAGTACCCTTGT
CCTCCTGGAAAGCTTGAGAGAAGCGGGAGTGCCGCTGGAGAAAATGGCAG
TGCACTTCCACGACACATACGGGCAGGCCTTGGCTAACATCCTCATTGCG
CTGGAGGAGGTGGCGACTTCCCTGTTGGACATGGGATGCTACTCGGTGTC
ACTGGGAGACACCATCGGCGCGGGCACAGCTGGCAGTACCCTTGTCCTCC
TGGAAAGCTTGAGAGAAGCGGGAGTGCCGCTGGAGAAAATGGCAGTGCAC
TTCCACGACACATACGGGCAGGCCTTGGCTAACATCCTCATTGCGCTGGA
GGAGGGTATTACCGTGTTGGACACGTCGGTTTCTGGCCTAGGGGGTTGCC
CATACGCTGCCGGGGCAAGCGGCAACGTCGCAACAGAAGACGTGGTGTAC
ATGTTGGATGGAATGGGAATCAACACGGGCGTTGACCTAGATTTGTTGTT
AGACACTTCTCTGTACATTTCAGATAAGCTGGGTAGGCCGCCCCAGTCCA
GGGTAGCGAGAGCAATGTTGGCCAAGCGAAGTTGAGGTATTACCGTGTTG
GACACGTCGGTTTCTGGCCTAGGGGGTTGCCCATACGCTGCCGGGGCAAG
CGGCAACGTCGCAACAGAAGACGTGGTGTACATGTTGGATGGAATGGGAA
TCAACACGGGCGTTGACCTAGATTTGTTGTTAGACACTTCTCTGTACATT
TCAGATAAGCTGGGTAGGCCGCCCCAGTCCAGGGTAGCGAGAGCAATGTT
GGCCAAGCGAAGTTGA
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