mRNA_E-siliculosus-1a_M_contig82.16364.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig82.16364.1 vs. uniprot
Match: D8LQ61_ECTSI (Methyltransf_25 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ61_ECTSI) HSP 1 Score: 352 bits (903), Expect = 2.130e-119 Identity = 184/190 (96.84%), Postives = 186/190 (97.89%), Query Frame = 2
Query: 17 MDRKRTTSALVKYAKETFVENTRETSLVAPISPSPESLIETVLDSLRLEPHDIVVDLGCGDGRWLLAAARRGCAGRGLDLNEDLLRKGRLAAAEARVSSLVELDKEDIFDAPLAGSTVIIVYLFREGLAKMKQKLEAEADPGARVVSVGFQIRGWVSVATFVVEGLHAYIYRVSDPGDSSSGGTIAGVAP 586
MDRKRTTSALVKYAKETFVE+TRETSLVAPISPSPESLIETVLD LRLEPHDIVVDLGCGDGRWLLAAARRGCAGRGLDLNEDLLRKGRLAAAEARVSSLVELDKEDIF APLAGSTVIIVYLFREGLAKMK+KLEAEADPGARVVSVGFQIRGWVSVATFVVEGLHAYIYRVSD GDSSSG TIAGVAP
Sbjct: 1 MDRKRTTSALVKYAKETFVEHTRETSLVAPISPSPESLIETVLDGLRLEPHDIVVDLGCGDGRWLLAAARRGCAGRGLDLNEDLLRKGRLAAAEARVSSLVELDKEDIFVAPLAGSTVIIVYLFREGLAKMKEKLEAEADPGARVVSVGFQIRGWVSVATFVVEGLHAYIYRVSDLGDSSSGRTIAGVAP 190
BLAST of mRNA_E-siliculosus-1a_M_contig82.16364.1 vs. uniprot
Match: A0A7S1TVS2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVS2_9STRA) HSP 1 Score: 126 bits (317), Expect = 2.580e-31 Identity = 64/149 (42.95%), Postives = 99/149 (66.44%), Query Frame = 2
Query: 38 SALVKYAKETFVENTRETSLVAPISPSPESLIETVLDSLRLEPHDIVVDLGCGDGRWLLAAARR-GCAGRGLDLNEDLLRKGRLAAAEARVSSLVELDKEDIFDAPLAGSTVIIVYLFREGLAKMKQKLEAEADPGARVVSVGFQIRGW 481
+A+++ +KE F T +VAPISP+P +++ VLD + + D+V+DLGCGDGRWL+AAA GC G +L ++ + K A A A V +LVE+ ++DIF+ L+ ++V++ YLF + + ++K K+ AE P RVVSVGF + GW
Sbjct: 12 AAIIQASKEAFAAR-ENTIIVAPISPTPLPIVQAVLDKVSVNADDVVLDLGCGDGRWLVAAAEAYGCRCVGYELEDERIAKCGEAIAAAGVGALVEVRRQDIFEVDLSEASVLVFYLFSDAIQRLKDKVSAEIAPACRVVSVGFAVPGW 159
BLAST of mRNA_E-siliculosus-1a_M_contig82.16364.1 vs. uniprot
Match: A0A7S2MBH6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2MBH6_9STRA) HSP 1 Score: 105 bits (261), Expect = 9.170e-23 Identity = 63/181 (34.81%), Postives = 99/181 (54.70%), Query Frame = 2
Query: 41 ALVKYAKETFVE-------NTRETSLVAPISPSPESLIETVLDSLRLEPHDIVVDLGCGDGRWLLAAAR-RGCAGRGLDLNEDLLRKGRLAAAEARVSSLVELDKEDIFDAPLAGSTVI------IVYLFREGLAKMKQKLE---AEADPGARVVSVGFQIRGWVSVATFVVEGLHAYIYR 532
AL+K AK+ F E +++L APISP+P +I T L L+L+ ++VDLGCGDGRWLLAA++ C G+DL+ED L+ + E ++ +E+ + D+FD S V ++YLFR+ + +M + L+ + V+S+GF + GW + GL Y+Y
Sbjct: 46 ALLKLAKDRFREMQSTHQIQLLDSNLAAPISPTPNLIINTFLPHLKLDSSKLMVDLGCGDGRWLLAASKLTQCRSFGIDLDEDRLKIANQSITEQNLNDRIEVQRRDVFDFVQNDSKVFLMADVFVLYLFRDAMVEMGKLLQERLCQQKKSVCVLSIGFALTGWKPSHEQRINGLKVYLYN 226
BLAST of mRNA_E-siliculosus-1a_M_contig82.16364.1 vs. uniprot
Match: A0A2U3KGG1_9BACT (RNA methylase n=1 Tax=Candidatus Sulfopaludibacter sp. SbA4 TaxID=2043165 RepID=A0A2U3KGG1_9BACT) HSP 1 Score: 102 bits (254), Expect = 2.460e-22 Identity = 54/145 (37.24%), Postives = 83/145 (57.24%), Query Frame = 2
Query: 101 APISPSPESLIETVLDSLRLEPHDIVVDLGCGDGRWLLAAARRGCAGRGLDLNEDLLRKGRLAAAEARVSSLVELDKEDIFDAPLAGSTVIIVYLFREGLAKMKQKLEAEADPGARVVSVGFQIRGWVSVATFVVEGLHAYIYRV 535
AP +P ++ +L + +D V DLGCGDGR ++AAAR G G G+D+N + +R+ R A +A V L + DIFDA L G+TV+ +YL + +++ KL E PG RV+S F + W+ VV+G Y++ +
Sbjct: 31 APYVTTPARVVSAMLQLAGVTRNDTVYDLGCGDGRIVIAAARLGAHGVGIDINPERIREARTNARKAGVEGLARFEVGDIFDADLRGATVVALYLLPDLNFRLRPKLAKELKPGTRVLSHAFDMGDWMPEKKRVVDGSPIYLWTI 175
BLAST of mRNA_E-siliculosus-1a_M_contig82.16364.1 vs. uniprot
Match: A0A8J2SMY6_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SMY6_9STRA) HSP 1 Score: 108 bits (270), Expect = 2.520e-22 Identity = 77/174 (44.25%), Postives = 100/174 (57.47%), Query Frame = 2
Query: 38 SALVKYAKETFVENTRETS--LVAPISPSPESLIETVLDSLR---LEPHDIVVDLGCGDGRWLLAAARRGCAGRGLDLNEDLLRKGRLAAAEARVSSLVELD---KEDIFDAPLAGSTVIIVYLFREGLAKMKQKLEAEADPGARVVSVGFQIRGWVSVATFVVEGLHAYIYRV 535
+AL+ AK+ F E +S LVAPISPSP LIE L L L + +VDLGCGD RWL+AA + G D++ LL KGR AA + +LVE D E+IF+ V++ YLFREG AK+++KLE E G +V VGF++RGW S GL A +Y V
Sbjct: 13 AALIALAKQRFAEQQSASSHQLVAPISPSPPELIEKTLRELEARGLLRDNRLVDLGCGDCRWLVAARKHCRRLVGYDIDGKLLEKGR-AALDGADHTLVEADFFESENIFE----DGDVVVAYLFREGCAKLREKLERELRCGT-LVCVGFELRGWRSSFEVAAGGLVARVYEV 180
BLAST of mRNA_E-siliculosus-1a_M_contig82.16364.1 vs. uniprot
Match: A0A350UFJ3_9BACT (SAM-dependent methyltransferase n=1 Tax=Bryobacterales bacterium TaxID=2026791 RepID=A0A350UFJ3_9BACT) HSP 1 Score: 102 bits (253), Expect = 3.420e-22 Identity = 52/150 (34.67%), Postives = 88/150 (58.67%), Query Frame = 2
Query: 95 LVAPISPSPESLIETVLDSLRLEPHDIVVDLGCGDGRWLLAAARR-GCAGRGLDLNEDLLRKGRLAAAEARVSSLVELDKEDIFDAPLAGSTVIIVYLFREGLAKMKQKLEAEADPGARVVSVGFQIRGWVSVATFVVEGLHAYIYRVSD 541
L P P+P ++E +LD ++ D V+DLGCGDGR ++ AA++ G G G+DLN + + + A A+V V+ ++D+F+A L +TV+ +YL AK+K +L + PG R+VS F + GW +V ++G Y++ + +
Sbjct: 25 LAVPYVPTPNQVVEGMLDLAKVTKGDTVIDLGCGDGRIVITAAQKFGARGIGVDLNPERIAEAEANAKSAKVEGQVKFIEQDLFEADLREATVVTLYLLPSVNAKLKPRLLEQLKPGTRIVSHSFDMPGWKAVEKRQIDGRTIYLWVIPE 174
BLAST of mRNA_E-siliculosus-1a_M_contig82.16364.1 vs. uniprot
Match: A0A5D6Y1Z6_9STRA (Methyltransf_25 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1Z6_9STRA) HSP 1 Score: 102 bits (253), Expect = 5.380e-22 Identity = 56/164 (34.15%), Postives = 88/164 (53.66%), Query Frame = 2
Query: 77 NTRETSLVAPISPSPESLIETVLDSLR--------LEPHDIVVDLGCGDGRWLLAAARR-GCAGRGLDLNEDLLRKGRLAAAEARVSSLVELDKEDIFDAPLAGSTVIIVYLFREGLAKMKQKLEAEADPGARVVSVGFQIRGWVSVATFVVEGLHAYIYRVSD 541
N +T L AP SPSP +IE V +SL L HD++VDLGCGD RWL+A +R GC G++++ +S + +++ D+ +A + ++IVY F E L ++ LE + D A V+S+GF+I GW + V+ + Y Y +S+
Sbjct: 29 NASQTPLFAPFSPSPVRVIEAVWESLDARKAPLAVLARHDLLVDLGCGDARWLVAGVQRYGCEALGVEIDXXXXXXXXXXXXXXALSDRIRVEQGDVMTTDIARAKLVIVYAFAEALHGIRAHLETQLDASAAVLSIGFRIPGWQPSCSDRVDSMRWYFYELSE 192
BLAST of mRNA_E-siliculosus-1a_M_contig82.16364.1 vs. uniprot
Match: A0A6A3XID4_9STRA (Methyltransf_25 domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3XID4_9STRA) HSP 1 Score: 101 bits (251), Expect = 1.060e-21 Identity = 56/158 (35.44%), Postives = 90/158 (56.96%), Query Frame = 2
Query: 86 ETSLVAPISPSPESLIETVLDSLR-----LEPHDIVVDLGCGDGRWLLAAARR-GCAGRGLDLNEDLLRKGRLAAAEARVSSLVELDKEDIFDAPLAGSTVIIVYLFREGLAKMKQKLEAEADPGARVVSVGFQIRGWVSVATFVVEGLHAYIYRVSD 541
E L AP SPSP ++I+ V L L D++VDLGCGDGRWL++ +R C G++L+E L+ + R E ++ +++ D+ A ++ + ++IVY F E L + Q+L A+ A V+SVGF++ W + GL Y+Y++SD
Sbjct: 38 EQELFAPFSPSPVAVIDAVWTKLEDAQLALTSEDLLVDLGCGDGRWLVSGVKRFDCKALGVELDETLVHRARTQVQEQQLQHKIQVQLGDVMLADISQAKLVIVYAFAESLPGIAQRLTAQLKEDASVLSVGFRVPDWKPHWSEREGGLRWYLYKMSD 195
BLAST of mRNA_E-siliculosus-1a_M_contig82.16364.1 vs. uniprot
Match: A0A7X7ZJL9_9BACT (Methyltransferase domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7X7ZJL9_9BACT) HSP 1 Score: 103 bits (257), Expect = 1.210e-21 Identity = 54/128 (42.19%), Postives = 76/128 (59.38%), Query Frame = 2
Query: 98 VAPISPSPESLIETVLDSLRLEPHDIVVDLGCGDGRWLLAAARRGCAGRGLDLNEDLLRKGRLAAAEARVSSLVELDKEDIFDAPLAGSTVIIVYLFREGLAKMKQKLEAEADPGARVVSVGFQIRGW 481
+AP P+P +++ +L+ + P D+V DLGCGDGR ++AAA+RG G G++L+ LL + R A V LV +ED A L G+TV+ +YL E L + + E PGARVVS F I GW
Sbjct: 138 LAPFVPTPPEIVDRMLELAAVGPGDVVYDLGCGDGRMVIAAAKRGARGVGVELDAALLAECRAGAKREGVEHLVRFVEEDALTARLTGATVLALYLLPESLEALAPRFARELPPGARVVSHDFAIPGW 265
BLAST of mRNA_E-siliculosus-1a_M_contig82.16364.1 vs. uniprot
Match: UPI00140C77D8 (methyltransferase domain-containing protein n=1 Tax=Sphingosinicella sp. YJ22 TaxID=1104780 RepID=UPI00140C77D8) HSP 1 Score: 100 bits (249), Expect = 1.600e-21 Identity = 58/164 (35.37%), Postives = 87/164 (53.05%), Query Frame = 2
Query: 95 LVAPISPSPESLIETVLDSLRLEPHDIVVDLGCGDGRWLLAAARRGCAGRGLDLNEDLLRKGRLAAAEARVSSLVELDKEDIFDAPLAGSTVIIVYLFREGLAKMKQKLEAEADPGARVVSVGFQIRGWVSVATFVVEGLHAYIYRVSDPGDSSSGGTIAGVAP 586
L AP +P L+E +LD + D ++DLGCGDGR ++AAARRG G+D++ + + A A + + ED+F+ L G++V+ +YL + +L+ E PG+RVVS F I GW + VVEG H Y++RV D + I P
Sbjct: 23 LDAPFWSTPRELVEHMLDLAGVGATDRLIDLGCGDGRIVIAAARRGAESLGIDVDPCRIAEAEAGARAAGLENRAHFRTEDLFETSLDGASVVTLYLVPLTNWLLGYRLQRELVPGSRVVSHAFPIVGWPADEEHVVEGRHVYLWRVPAEADRPAPAPIPFGTP 186 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig82.16364.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig82.16364.1 >prot_E-siliculosus-1a_M_contig82.16364.1 ID=prot_E-siliculosus-1a_M_contig82.16364.1|Name=mRNA_E-siliculosus-1a_M_contig82.16364.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=194bp MDRKRTTSALVKYAKETFVENTRETSLVAPISPSPESLIETVLDSLRLEPback to top mRNA from alignment at E-siliculosus-1a_M_contig82:52136..54784+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig82.16364.1 ID=mRNA_E-siliculosus-1a_M_contig82.16364.1|Name=mRNA_E-siliculosus-1a_M_contig82.16364.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2649bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig82:52136..54784+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig82:52136..54784+ >mRNA_E-siliculosus-1a_M_contig82.16364.1 ID=mRNA_E-siliculosus-1a_M_contig82.16364.1|Name=mRNA_E-siliculosus-1a_M_contig82.16364.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1164bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig82:52136..54784+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |