mRNA_E-siliculosus-1a_M_contig82.16363.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig82.16363.1 vs. uniprot
Match: D8LQ62_ECTSI (Alkaline phytoceramidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ62_ECTSI) HSP 1 Score: 543 bits (1400), Expect = 4.970e-187 Identity = 256/261 (98.08%), Postives = 257/261 (98.47%), Query Frame = 1
Query: 1 MANDMPEHGYWGPVTATIDWCEENYAWSFFIAEFWNTASISSAIFLAGVYGWFMAVADDLEIRFQQVSQLLVASVGIGSACFHCTLRHAEQQCDETPMVLAMLNWFHELFADTWESNRFLREAMPVLLVVYGLGFALLHNMYRWTTGFQIHFIVWGLANLARCIYVSREKGVDPATVLLKRAVISTALATFFWATDFHFCSHLQSGPMPNPEGHAWWHVLIAYAILQCTSFSIYRRCIQLGKPVAIVLKGPFGLWPTVRVV 783
MANDMPEHGYWGPVTATIDWCEENYAWS+FIAEFWNT S S AIFLAGVYGWFMAVADDLEIRFQ VSQLLVASVGIGSACFHCTLRHAEQQCDETPMVLAMLNWFHELFADTWESNRFLREAMPVLLVVYGLGFALLHNMYRWTTGFQIHFIVWGLANLARCIYVSREKGVDPATVLLKRAVISTALATFFWATDFHFCSHLQSGPMPNPEGHAWWHVLIAYAILQCTSFSIYRRCIQLGKPVAIVLKGPFGLWPTVRVV
Sbjct: 1 MANDMPEHGYWGPVTATIDWCEENYAWSYFIAEFWNTVS-SLAIFLAGVYGWFMAVADDLEIRFQ-VSQLLVASVGIGSACFHCTLRHAEQQCDETPMVLAMLNWFHELFADTWESNRFLREAMPVLLVVYGLGFALLHNMYRWTTGFQIHFIVWGLANLARCIYVSREKGVDPATVLLKRAVISTALATFFWATDFHFCSHLQSGPMPNPEGHAWWHVLIAYAILQCTSFSIYRRCIQLGKPVAIVLKGPFGLWPTVRVV 259
BLAST of mRNA_E-siliculosus-1a_M_contig82.16363.1 vs. uniprot
Match: A0A6H5L050_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L050_9PHAE) HSP 1 Score: 425 bits (1092), Expect = 1.750e-141 Identity = 201/208 (96.63%), Postives = 203/208 (97.60%), Query Frame = 1
Query: 160 MAVADDLEIRFQQVSQLLVASVGIGSACFHCTLRHAEQQCDETPMVLAMLNWFHELFADTWESNRFLREAMPVLLVVYGLGFALLHNMYRWTTGFQIHFIVWGLANLARCIYVSREKGVDPATVLLKRAVISTALATFFWATDFHFCSHLQSGPMPNPEGHAWWHVLIAYAILQCTSFSIYRRCIQLGKPVAIVLKGPFGLWPTVRVV 783
MAVADDLEIRFQ VSQLLVASVGIGSACFHCTLRHAEQQCDETPMVLAMLNWFHELFADTWESNRFLREAMPVLLVVYGLGFALLHN YRWTTGFQIHFIVWGLANLARCIYVSREKGVDPATVLLKRAV+STALA+FFWATDFHFCSHLQSGPMPNPEGHAWWHVLIAYAILQCT FSIYRRCIQLGKPVAIV KGPF LWPTVRVV
Sbjct: 1 MAVADDLEIRFQ-VSQLLVASVGIGSACFHCTLRHAEQQCDETPMVLAMLNWFHELFADTWESNRFLREAMPVLLVVYGLGFALLHNTYRWTTGFQIHFIVWGLANLARCIYVSREKGVDPATVLLKRAVMSTALASFFWATDFHFCSHLQSGPMPNPEGHAWWHVLIAYAILQCTLFSIYRRCIQLGKPVAIVFKGPFRLWPTVRVV 207
BLAST of mRNA_E-siliculosus-1a_M_contig82.16363.1 vs. uniprot
Match: A0A7S2XXL3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXL3_9STRA) HSP 1 Score: 191 bits (486), Expect = 9.480e-52 Identity = 96/247 (38.87%), Postives = 142/247 (57.49%), Query Frame = 1
Query: 1 MANDMPEHGYWGPVTATIDWCEENYAWSFFIAEFWNTASISSAIFLAGVYGWFMAVADDLEIRFQQVSQLLVA-----SVGIGSACFHCTLRHAEQQCDETPMVLAMLNWFHELFADTWESNRFLREAMPVLLVVYGLGFALLHNMYRWTTGFQIHFIVWGLANLARCIYVSREKGVDPATVLLKRAVISTALATFFWATDFHFCSHLQSGPMPNPEGHAWWHVLIAYAILQCTSFSIYRRCIQLGK 726
+ D+ G+WGPVTATIDWCEENY W+ +IAEF+NT S +SA+ + G+YG + R + + LL A +VG+GSA FHCTLR+ EQQCDETPMV L W L+ + + + R + VL ++Y FA LH ++R+TT FQ HF+ ++ + + V ++ +LK + + +A FW D C H+QS P+ NP+GHA WH+L+ Y F Y + ++ +
Sbjct: 10 VEEDVTNLGFWGPVTATIDWCEENYVWTEYIAEFFNTIS-NSALVILGIYGIYQ------NFRQRHDNSLLAAWLSMIAVGVGSAAFHCTLRYVEQQCDETPMVWGQLAWNFLLYKEKFSHPKAWRHFVAVLFIIYAAVFAYLHAIFRFTTAFQWHFVFISAFSVRKLVQVYQKMKQPEGRRILKENMAALVIAVTFWLADHLLCDHMQSLPV-NPQGHAVWHILMGYYCYTGPIFIQYYQALETNR 248
BLAST of mRNA_E-siliculosus-1a_M_contig82.16363.1 vs. uniprot
Match: K3X0W7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X0W7_GLOUD) HSP 1 Score: 177 bits (448), Expect = 2.170e-46 Identity = 98/249 (39.36%), Postives = 140/249 (56.22%), Query Frame = 1
Query: 25 GYWGPVTATIDWCEENYAWSFFIAEFWNTASISSAIF-LAGVYGWFMAVADDLEIRFQQVSQLLVASVGIGSACFHCTLRHAEQQCDETPMVLAMLNWFHELFADTWESNRFLREAMPVLLVVYGLGFALLHNMYRWTTGFQIHFIVWGLANLAR-CIYVSREKGVDPATVLLKRAVISTALATF-FWATDFHFCSHLQSGPMPNPEGHAWWHVLIAYAILQCTSFSIYRRCIQLGKPVAIVLKGPFGL 762
G+WGP TATIDWCE NY SF++AEFWNT +S+ +F L G+YG ++ E RF V + V G+GSA FH TL+ QQCDETPMV AML W + ++++ + + +L G+ FA++H +YR+TT FQ+ F + R C + S + DP + R+ + +L F FW D+H+C H+ P+ NP+GHAWWH+ + + F Y R QL K V FG+
Sbjct: 14 GFWGPTTATIDWCEPNYQHSFYVAEFWNT--LSNLLFVLLGLYGLRQSMTQGFEPRFH-VQFIGVIITGLGSAMFHGTLQSVHQQCDETPMVWAMLVWIYIVYSNEISQLNIPKSTVVAVLTFLGVAFAVVHAIYRFTTFFQLAFGTLAVLCCVRLCFFYSSVQ--DPRAKAVARSYVRNSLIGFAFWMIDYHYCHHMCELPV-NPQGHAWWHIFMGISSYHGPVFMQYVRMEQL-KQKGEVRNACFGI 255
BLAST of mRNA_E-siliculosus-1a_M_contig82.16363.1 vs. uniprot
Match: A0A6A3DKZ9_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3DKZ9_9STRA) HSP 1 Score: 174 bits (441), Expect = 1.990e-45 Identity = 99/242 (40.91%), Postives = 138/242 (57.02%), Query Frame = 1
Query: 25 GYWGPVTATIDWCEENYAWSFFIAEFWNTASISSAIFLAGVYGWFMAVADDLEIRFQQVSQLLVASVGIGSACFHCTLRHAEQQCDETPMVLAMLNWFHELFADTWESNRFLREAMPVL--LVVYGLGFALLHNMYRWTTGFQIHFIVWGLANLAR-CIYVSREKGVDPATVLLKRAVISTALATF-FWATDFHFCSHLQSGPMPNPEGHAWWHVLIAYAILQCTSFSIYRRCIQLGKPVAI 738
G+WGP T+TIDWCE NY SF+IAEFWNT S +S L G+YG ++ E RF + + V G GSA FH TL+H QQCDETPMV AML W + ++ + E + V+ L G+ F +H +YR+TT FQ+ F V + AR C++ + K D + R+ +++AL F FW D+H+C L+ P+ NP+GHAWWH+ + + F Y R QL + V I
Sbjct: 16 GFWGPPTSTIDWCELNYEHSFYIAEFWNTVS-NSLFVLLGLYGLCRSIKMGFEPRFH-LQFIGVMVTGFGSAMFHGTLQHVYQQCDETPMVWAMLVWIYIVYNNEIEQIPVKHASTYVIAFLTTIGVIFTAIHAIYRFTTVFQVFFGVLAVLTCARLCMHYAEVK--DQRARAVARSYVTSALIGFAFWMMDYHYCHTLRGLPV-NPQGHAWWHIFMGVSSYHGPIFMQYVRMEQLKRKVRI 252
BLAST of mRNA_E-siliculosus-1a_M_contig82.16363.1 vs. uniprot
Match: H3GLF4_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GLF4_PHYRM) HSP 1 Score: 174 bits (440), Expect = 2.120e-45 Identity = 97/247 (39.27%), Postives = 138/247 (55.87%), Query Frame = 1
Query: 13 MPEHGYWGPVTATIDWCEENYAWSFFIAEFWNTASISSAIFLAGVYGWFMAVADDLEIRFQQVSQLLVASVGIGSACFHCTLRHAEQQCDETPMVLAMLNWFHELFADTWESNRFLREAMPVL--LVVYGLGFALLHNMYRWTTGFQIHFIVWGLANLAR-CIYVSREKGVDPATVLLKRAVISTALATF-FWATDFHFCSHLQSGPMPNPEGHAWWHVLIAYAILQCTSFSIYRRCIQLGKPVAIV 741
M G+WGP T+TIDWCE NY S++IAEFWNT S +S L G+YG + ++ E RF + + V G GSA FH TL+H QQCDETPMV ++L W + ++ + E + V+ L G F ++H +YR+TT FQ+ F + R C++ + K DP + + ++++L F FW D+H+C HL G NP+GHAWWHV + + F Y R QL K V I+
Sbjct: 1 MRAPGFWGPPTSTIDWCENNYEHSYYIAEFWNTIS-NSLFVLLGLYGLYRSIKMGFEPRFH-LQFIGVMVTGFGSAMFHGTLQHVYQQCDETPMVWSILAWLYIVYNNEIEQLPVKNASKYVIAFLATIGAVFTVVHAIYRFTTVFQVFFGSLAVLGAGRLCVHYAEVK--DPRARAVALSYVTSSLIGFAFWLVDYHYC-HLMRGLPVNPQGHAWWHVFMGISTYHGPIFMQYVRMEQLQKKVHIL 242
BLAST of mRNA_E-siliculosus-1a_M_contig82.16363.1 vs. uniprot
Match: A0A8K1C620_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C620_PYTOL) HSP 1 Score: 173 bits (438), Expect = 3.770e-45 Identity = 95/237 (40.08%), Postives = 136/237 (57.38%), Query Frame = 1
Query: 25 GYWGPVTATIDWCEENYAWSFFIAEFWNTASISSAIFLA-GVYGWFMAVADDLEIRFQQVSQLLVASVGIGSACFHCTLRHAEQQCDETPMVLAMLNWFHELFADTWESNRFLREAMPVLLVVYGLGFALLHNMYRWTTGFQIHF-IVWGLANLARCIYVSREKGVDPATVLLKRAVISTALATF-FWATDFHFCSHLQSGPMPNPEGHAWWHVLIAYAILQCTSFSIYRRCIQLGK 726
G+WG TATIDWCE NY SF+IAEFWNT IS+ +F+ G YG + +V + E RF + V GIGSA FH TL+ QQCDETPMV AML W + ++ + + + L G+GFA++H +YR+TT FQ+ F I+ L + CI+ ++ K V + + + +L F W D+H+C +++ P+ NP+GHAWWH+ + A F + R QL K
Sbjct: 9 GFWGEPTATIDWCEPNYEHSFYIAEFWNT--ISNLLFVVLGFYGLWRSVQEGFEWRFH-AQFIAVMITGIGSAMFHGTLQLVHQQCDETPMVWAMLVWIYIVYNNEIRKSGLSDAVVIPFLAFLGIGFAIIHAIYRFTTLFQVFFGILASLCCIRMCIHYTQVKDARARAVAI--SYVRNSLVGFALWMMDYHYCYYMKQLPV-NPQGHAWWHIFMGIASYHGPIFMQFVRMEQLEK 239
BLAST of mRNA_E-siliculosus-1a_M_contig82.16363.1 vs. uniprot
Match: A0A6G0W4U1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W4U1_9STRA) HSP 1 Score: 172 bits (435), Expect = 7.520e-45 Identity = 104/262 (39.69%), Postives = 136/262 (51.91%), Query Frame = 1
Query: 1 MANDMPEHGYWGPVTATIDWCEENYAWSFFIAEFWNTASISSAIFLAGVYGWFMAVADDLEIRFQQVSQLLVASVGIGSACFHCTLRHAEQQCDETPMVLAMLNWFHELFADTWESNRFLREAMPVLLV-VYGLGFALLHNMYRWTTGFQIHFIVWGLANLARCIYVSREKGVDPATVLLKRAVISTALATFFWATDFHFCSHLQSGPMPNPEGHAWWHVLIAYAILQCTSFSIYRRCIQLGKPVAIVLKGPFGLWPTVRVV 783
MA+D GYWGPVT+TIDWCE NY SF++AEFWN S + LAG YG + ++A E RF + + + +GIGSA FH TL QQ DETPM+ +ML WF+ L++ WE + VLL+ GLGFA LH +YR+TTGFQ+ F L L R + A L+ + S +AT W DFH+C N GHAWWH ++ F Y R GK + + WPT +
Sbjct: 1 MASDR--QGYWGPVTSTIDWCEPNYVASFYMAEFWNAWS-NIFFVLAGFYGLYRSIALGFEWRFHLI-YINIVVIGIGSAMFHGTLLFVSQQFDETPMIWSMLIWFYILYSPLWEKQSASVNSFIVLLLSTLGLGFAGLHAIYRFTTGFQLLFAALVLFCLPRLFWYYGGVKNARARSLVGLYLGSILIATACWLVDFHYCQSAF-----NFYGHAWWHCFMSLNAYAGPLFMQYVRADSKGKNPTVEVA-----WPTTLTI 248
BLAST of mRNA_E-siliculosus-1a_M_contig82.16363.1 vs. uniprot
Match: A0A8K1C5L2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5L2_PYTOL) HSP 1 Score: 171 bits (432), Expect = 2.380e-44 Identity = 95/241 (39.42%), Postives = 136/241 (56.43%), Query Frame = 1
Query: 25 GYWGPVTATIDWCEENYAWSFFIAEFWNTASISSAIFLA-GVYGWFMAVADDLEIRFQQVSQLLVASVGIGSACFHCTLRHAEQQCDETPMVLAMLNWFHELFADTWESNRFLREAMPVLLVVYGLGFALLHNMYRWTTGFQIHFIVWGLANLARCIYVSREKGVDP-ATVLLKRAVISTALATFFWATDFHFCSHLQSGPMPNPEGHAWWHVLIAYAILQCTSFSIYRRCIQLGKPVAIV 741
G+WG TATIDWCE NY SF++AEFWNT IS+ IF+A G+YG++ + + E RF+ + L V G GSA FH TL+ QQCDETPMV ML W + +F + L + G+GFA++H +YR+TT FQ+ ++ R +Y ++ DP A + V S+ +A W DFH C +++ P+ NP+GHAWWH+ I + F Y R +L + +V
Sbjct: 10 GFWGEPTATIDWCEPNYEHSFYVAEFWNT--ISNLIFVALGLYGYWRSAKEGFEWRFR-LQFLAVMVTGFGSAMFHGTLQLVHQQCDETPMVWVMLIWIYTVFNHEIRELGVSDAVIVCFLTLLGVGFAVVHAIYRFTTLFQLLIAAMAISCSCR-LYYHYQRVRDPRARAVAVSHVRSSLIALACWLVDFHLCYYVRKLPV-NPQGHAWWHIFIGISSYHGPLFMQYVRLEELQRRPKVV 245
BLAST of mRNA_E-siliculosus-1a_M_contig82.16363.1 vs. uniprot
Match: A0A0N7L5A9_PLAHL (Alkaline phytoceramidase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L5A9_PLAHL) HSP 1 Score: 171 bits (433), Expect = 2.430e-44 Identity = 95/242 (39.26%), Postives = 138/242 (57.02%), Query Frame = 1
Query: 25 GYWGPVTATIDWCEENYAWSFFIAEFWNTASISSAIFLAGVYGWFMAVADDLEIRFQQVSQLLVASVGIGSACFHCTLRHAEQQCDETPMVLAMLNWFHELFADTWESNRFLREA--MPVLLVVYGLGFALLHNMYRWTTGFQIHFIVWGLANLAR-CIYVSREKGVDPATVLLKRAVISTALATF-FWATDFHFCSHLQSGPMPNPEGHAWWHVLIAYAILQCTSFSIYRRCIQLGKPVAI 738
G+WGP T+TIDWCE NY S++IAEFWNT S +S L G+YG + ++ E RF + + V G GSA FH TL+H QQCDETPMV ++L W + + + E + + +LL + G+ F ++H +YR+TT FQ+ F + + AR C++ + K DP + R+ ++ +L F W D+H+C H+ G NP+GHAWWH+ + F Y R QL K V I
Sbjct: 13 GFWGPPTSTIDWCENNYEHSYYIAEFWNTIS-NSLFVLLGLYGLYRSIKMGFEPRFH-LQFIGVMVTGFGSAMFHGTLQHVYQQCDETPMVWSILIWNYIVHNNEIEQIPIKNASTYVIILLTIIGIIFTVVHAVYRFTTVFQVFFGLLAVVGAARLCVHYTEVK--DPRARAVARSYVTFSLIGFALWMMDYHYC-HIVRGLPINPQGHAWWHMFTGISTYYGPIFMQYVRMEQLKKKVHI 249 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig82.16363.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig82.16363.1 >prot_E-siliculosus-1a_M_contig82.16363.1 ID=prot_E-siliculosus-1a_M_contig82.16363.1|Name=mRNA_E-siliculosus-1a_M_contig82.16363.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=262bp MANDMPEHGYWGPVTATIDWCEENYAWSFFIAEFWNTASISSAIFLAGVYback to top mRNA from alignment at E-siliculosus-1a_M_contig82:46011..51897- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig82.16363.1 ID=mRNA_E-siliculosus-1a_M_contig82.16363.1|Name=mRNA_E-siliculosus-1a_M_contig82.16363.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5887bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig82:46011..51897- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig82:46011..51897- >mRNA_E-siliculosus-1a_M_contig82.16363.1 ID=mRNA_E-siliculosus-1a_M_contig82.16363.1|Name=mRNA_E-siliculosus-1a_M_contig82.16363.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1572bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig82:46011..51897- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |