mRNA_E-siliculosus-1a_M_contig82.16361.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig82.16361.1 vs. uniprot
Match: A0A6C0KUV3_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0KUV3_9ZZZZ) HSP 1 Score: 65.1 bits (157), Expect = 6.500e-10 Identity = 33/82 (40.24%), Postives = 49/82 (59.76%), Query Frame = 1
Query: 4 MIGFVGRKRSGKDTLATFVRDLFPDTNIMSFADPLKQACKHAYHLKDEQLEKT-KDIVDPRWGMTPRDMMKSLGGKNTFATK 246
+IG +GR R GKDT+A ++ +P + + P+K A K Y EQLE + K+I+DPRW ++PRD M + +TF K
Sbjct: 8 IIGLLGRARRGKDTVANYIIKKYPCYTNIKLSKPIKDAAKSLYDFTYEQLEGSQKEIIDPRWNISPRDAMVFI--TSTFMNK 87
BLAST of mRNA_E-siliculosus-1a_M_contig82.16361.1 vs. uniprot
Match: A0A6G6XPL3_9VIRU (Deoxynucleoside monophosphate kinase n=1 Tax=Dishui Lake large algae virus 1 TaxID=2704073 RepID=A0A6G6XPL3_9VIRU) HSP 1 Score: 65.1 bits (157), Expect = 6.500e-10 Identity = 31/74 (41.89%), Postives = 49/74 (66.22%), Query Frame = 1
Query: 4 MIGFVGRKRSGKDTLATFVRDLFPDTNIMSFADPLKQACKHAYHLKDEQLEKT-KDIVDPRWGMTPRDMMKSLG 222
++ G++RSGKDT+A ++ + +I A PLK CK +H D+QLE K++VDPRWG++PR +M+ +G
Sbjct: 11 VVALCGQRRSGKDTIANYLVTGYGYEHIKITA-PLKTVCKTLFHFTDDQLETDIKEVVDPRWGVSPRQVMQFVG 83
BLAST of mRNA_E-siliculosus-1a_M_contig82.16361.1 vs. uniprot
Match: A0A1V0SJ10_9VIRU (Deoxynucleoside monophosphate kinase n=1 Tax=Klosneuvirus KNV1 TaxID=1977640 RepID=A0A1V0SJ10_9VIRU) HSP 1 Score: 63.9 bits (154), Expect = 1.420e-9 Identity = 31/75 (41.33%), Postives = 50/75 (66.67%), Query Frame = 1
Query: 1 MMIGFVGRKRSGKDTLATFVRDLFPDTNIMSFADPLKQACKHAYHLKDEQLE-KTKDIVDPRWGMTPRDMMKSLG 222
M+IG +GRK SGKDT++ ++ F + M A+PLK AC+ ++ +EQL K+ DP+WG++PR +++ LG
Sbjct: 1 MLIGVLGRKGSGKDTVSDYIVHKF-NFEKMILAEPLKNACRELFNFSEEQLYGNLKETDDPQWGISPRKVLQWLG 74
BLAST of mRNA_E-siliculosus-1a_M_contig82.16361.1 vs. uniprot
Match: A0A836CMM7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMM7_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 3.000e-9 Identity = 33/76 (43.42%), Postives = 46/76 (60.53%), Query Frame = 1
Query: 1 MMIGFVGRKRSGKDTLATFVRDLFPDTNIMSFADPLKQACKHAYHLKDEQLEKT--KDIVDPRWGMTPRDMMKSLG 222
+++G V K +GKDT A V D D +SFADP+K AC+ + L + LE K+ VD RWG++ R MM+ LG
Sbjct: 5 LIVGLVAPKAAGKDTFANAVGDDAKDFAKLSFADPIKAACRSIFSLDVDDLEDRVKKESVDDRWGVSRRKMMQVLG 80
BLAST of mRNA_E-siliculosus-1a_M_contig82.16361.1 vs. uniprot
Match: A0A7D3QU00_9VIRU (Deoxynucleoside monophosphate kinase n=1 Tax=Fadolivirus 1 TaxID=2740746 RepID=A0A7D3QU00_9VIRU) HSP 1 Score: 62.8 bits (151), Expect = 4.950e-9 Identity = 38/107 (35.51%), Postives = 57/107 (53.27%), Query Frame = 1
Query: 1 MMIGFVGRKRSGKDTLATFVRDLFPDTNIMSFADPLKQACKHAYHLKDEQLE-KTKDIVDPRWGMTPRDMMKSLGGKNTFATKTLTIGPRTCPSESRAWAAL*SRMY 318
M+IG +GRK +GKDT+A + + ++ A PLK ACK ++ DEQL K+ +DP WG++PR +++ +G + F I P S W L S Y
Sbjct: 10 MIIGILGRKGAGKDTIADHMIKNYKFQKLV-LAQPLKDACKVLFNFNDEQLYGNLKETIDPNWGVSPRQVLQYVG-TDIFRKDITRIIPDI---NSNFWVNLMSTKY 111
BLAST of mRNA_E-siliculosus-1a_M_contig82.16361.1 vs. uniprot
Match: A0A836CHH3_9STRA (Deoxynucleotide monophosphate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHH3_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 9.270e-9 Identity = 33/75 (44.00%), Postives = 46/75 (61.33%), Query Frame = 1
Query: 4 MIGFVGRKRSGKDTLATFVRDLFPDTNIMSFADPLKQACKHAYHLKDEQLE--KTKDIVDPRWGMTPRDMMKSLG 222
+IG VG K +GKDT A + SFA P+K+AC + L DE E + K+ VDPRWG++PR M+++LG
Sbjct: 3 IIGLVGTKGAGKDTFADAL-----GLPKYSFAAPIKEACCAIFMLDDEAFEDRRLKETVDPRWGISPRSMLQTLG 72
BLAST of mRNA_E-siliculosus-1a_M_contig82.16361.1 vs. uniprot
Match: A0A836CE54_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE54_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.090e-8 Identity = 35/80 (43.75%), Postives = 48/80 (60.00%), Query Frame = 3
Query: 255 HWTKNMSFRIQGLGS--VVISDVRFQNEAAFVKENGGVLIHVWRDMESNSDNDVTEQTTDEISCDHYIRNDGSLEDLRVK 488
HW ++M ++Q S VVI+DVRF +EAAFV+ GG L+ + R D V+E I CD I NDGS++D+R K
Sbjct: 84 HWIRHMEMQLQRCESESVVITDVRFPDEAAFVRRLGGRLVRIVRPTLRTDDAHVSETGIGGIECDEIIVNDGSIQDIREK 163
BLAST of mRNA_E-siliculosus-1a_M_contig82.16361.1 vs. uniprot
Match: A0A836CF82_9STRA (Deoxynucleotide monophosphate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF82_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 1.800e-8 Identity = 33/75 (44.00%), Postives = 45/75 (60.00%), Query Frame = 1
Query: 4 MIGFVGRKRSGKDTLATFVRDLFPDTNIMSFADPLKQACKHAYHLKDEQLEKT--KDIVDPRWGMTPRDMMKSLG 222
+IG VG K +GKDT A + SFA P+K+AC + L DE E K+ VDPRWG++PR M+++LG
Sbjct: 3 IIGLVGTKGAGKDTFADAL-----GLPKFSFAAPIKEACCAIFMLDDEAFEDRHLKETVDPRWGISPRSMLQTLG 72
BLAST of mRNA_E-siliculosus-1a_M_contig82.16361.1 vs. uniprot
Match: A0A835YKK8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKK8_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 2.010e-8 Identity = 33/76 (43.42%), Postives = 46/76 (60.53%), Query Frame = 1
Query: 1 MMIGFVGRKRSGKDTLATFVRDLFPDTNIMSFADPLKQACKHAYHLKDEQLEKT--KDIVDPRWGMTPRDMMKSLG 222
+++G V K +GKDT A V D D +SFADP+K AC+ + L + LE K+ VD RWG++ R MM+ LG
Sbjct: 138 LIVGLVAPKAAGKDTFANAVGDDAKDFAKLSFADPIKAACRSIFLLDVDDLEDRVKKESVDDRWGVSRRKMMQVLG 213
BLAST of mRNA_E-siliculosus-1a_M_contig82.16361.1 vs. uniprot
Match: A0A6C0LBN9_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0LBN9_9ZZZZ) HSP 1 Score: 59.7 bits (143), Expect = 1.040e-7 Identity = 33/81 (40.74%), Postives = 46/81 (56.79%), Query Frame = 1
Query: 1 MMIGFVGRKRSGKDTLATFVRDLFPDTNIMSFADPLKQACKHAYHLKDEQL-------EKTKDIVDPRWGMTPRDMMKSLG 222
M+I G KRSGKD LA + D + + +FA PLK A K ++ D+Q+ + KDIVD RWG+TPR ++ G
Sbjct: 8 MIIAICGAKRSGKDVLAQHLVDKYNYERV-AFAQPLKLAIKSLFNFDDDQVGIGEDKGTERKDIVDERWGITPRTALQFFG 87 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig82.16361.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig82.16361.1 >prot_E-siliculosus-1a_M_contig82.16361.1 ID=prot_E-siliculosus-1a_M_contig82.16361.1|Name=mRNA_E-siliculosus-1a_M_contig82.16361.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=102bp MMIGFVGRKRSGKDTLATFVRDLFPDTNIMSFADPLKQACKHAYHLKDEQback to top mRNA from alignment at E-siliculosus-1a_M_contig82:41784..42286+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig82.16361.1 ID=mRNA_E-siliculosus-1a_M_contig82.16361.1|Name=mRNA_E-siliculosus-1a_M_contig82.16361.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=503bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig82:41784..42286+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig82:41784..42286+ >mRNA_E-siliculosus-1a_M_contig82.16361.1 ID=mRNA_E-siliculosus-1a_M_contig82.16361.1|Name=mRNA_E-siliculosus-1a_M_contig82.16361.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=612bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig82:41784..42286+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |