mRNA_E-siliculosus-1a_M_contig81.16354.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig81.16354.1 vs. uniprot
Match: D7G6Q4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Q4_ECTSI) HSP 1 Score: 1547 bits (4006), Expect = 0.000e+0 Identity = 1236/1528 (80.89%), Postives = 1263/1528 (82.66%), Query Frame = 3
Query: 462 SPHSVRSWMGQSLAEGPDPRGSRGRSVPAQMRGSVGEGDNDAYQAQLAEVLGRWEVERAKTAELQGRAAAAASLRDRVRSSEGAASLAQAELEEAWGQLEAERRRGDAAEREMSALRXXXXXXXXXXXXRAADNEDLRSKLEALQTVEARSEEASAAADVLRGTLRETEERLKGSEERLRQTEGLRSKEAEDARESLQAARKALEEAEADAAERSRERSARAVGLQDVLRGQGALLAEREERLAEERSGRAAERMELRELRSRDAGYVRELKERADEIAELNQALSQLQEEDVQTAEEVGAARALRSENEELQARLAQALRQASAAESSARAAEDLASNANEEMVQELQDTRERLRDVEGERSHLEQRLGAVEARVSEAARNRADLSRRLAETAIEAEQAGVENQRLEHRVRSLSETWEADGGGLDLSSSSSSDGRRQSADELPAGRVPPRPLQAASGPATAQQQHQDLRRQVAALQEHLAAAEAXXXXXXXXAEEAAVRGGTAEAGKASRGKVALTEEPGSVSEAAVGVKDWSEASLEAARVDQAELRDTIASLRSQLXXXXXXXXXXXXXXXXXXXXXXXXXXFEADRRVALEREVTALRSRLQQXXXXXXXXXXXXXXGVGGAEQAGRLAEHERVAEAEASLAEVQAVCSRQAEDVAAALRRADTAEGELAAARASIADLAAAFDSSLQGKLDDAESKLEEYAREAAAAQAETEAVLRAEAASVHTAIQRRLQEAESRAMSLGEELEAALRAKEERDVQASKAAAVAAAEILEQERAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELRAVRDDLGTRAREAEATARAAEQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAEAGSKRAGASLSALQAHANGLTARAERAEGALATARADLEARGSALXXXXXXAREAEGELEAAVAEHTRAESELRNRLEKDKSEAVESARAKAXXXXXXXXXXXXXXXXXXXXXXXXADARAGAAEARLARAQGEALAAQEAESATAAEASSAAALLGAELSAVKQELARARATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADATEEGLRALLTAAERDXXXXXXXXXXXEERRAAAEXAHETALEQSRSEASRLVGELRAQLASKEARAEAAAEALARERAQAATVAEDLAKLEVTARDSQSRETGLRGELSAARAXXXXXXXXXXXXXXXARSEVDRLELEVDELKDEVAHVKATLSAHRSSTAAQGAAHAEAFERVEAAAREAKSVARAAEERLCTALEKAERDLEARSAGLVAEHREREEAVKAAGDVALTEAVAQVTVQRDGEVTMAREQAEASARESAAWRARAEEKDADLARLGEAAAATEAATFAELAASRDAETATTAAAARLRLEVQALESEAERVRAEREEVESAANAAVAAGEAKAVRLAEEVEGLLKELAGERQEAEEKLAEARAQELVTGRDHNLLPLPSARDLPS 5045
SPHSVRSWMGQSLAEGPDPRGSRGRSVP QMRGS GE DNDAYQAQLAEVLGRWE ERAKTAELQGRAAAAA L DRVRSS G ASLAQAELEEA G XXXXXXXXXXXXRA NEDLRSKLEALQTVEARSEEASAAAD LRGTLRETEERL+ RQ+EGLRSKEAEDARESLQAARKALEE EADAAERSRERSARA GLQDVL ELRELRSRDAGYVRELKERADEIAELNQALSQLQEED+QT EEVGAARALRSENEELQA LAQALRQASAAESSARA LA+ A EEMVQELQDTRERLRDVEGERSHLEQRLGAVEARVSEAARNRADLSRRLAETAIEAEQAGVENQRLEHRVRSLSETWEADGGGLDLSSSSSSDGRRQSADELPAG VPPRPLQAASGPA AQQQHQDLRRQVAALQEHLAAAE XXXXXXX AEEAAVRGGTAEAGKASRGKVALTEEP SVSEAAVGVKDWSE SLEAARVDQAEL++T+AS RSQL XXXXXXXXXXX FEADRRVALEREVTALRSRLQQ XXXXX GVGGAEQAGR AEHERVA AEASLAE+QAVCSRQAEDVAAAL++AD A+GELAAAR SIADLAAA DSSLQGKLD AE KLEEYAREAAAAQA+ EA+LRAEAASVHTA+QRRLQEAESRA+SLGEELEAALRAKEE DVQ S AAVAAAE L+ ERAA XXXXXXXXXXXXXXXXXXXXXXAELRAVRDDLG RAREAEATAR AEQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX WAEAGS+RAG+SLSALQA A+GL ARAERAEGALATARADLEA+GSAL AREAEGELEAAVAEHTRAESELRNRLEKDKSEAVE+ARAKAXXXXXXXXXXXXXXXXXXXXXXXX DARAGAAEARLARAQGEALAAQE A+LGAELSAVK ELARARAT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ADATEEGLRALLTAAERD EERRAAA AHET LEQSRSEASRLVGELRAQLASKEARAEAAAEAL RERAQAA VAEDLAKLEVTARDSQSRETGLRGELSAARA XXXXXXXXXXXX EVDRLE HAEAFERVEAA KAERDLEARSAGLVAEHREREEAVKAAGDVALT AVAQV VQ +GEVTMAREQAEASARESA WRARAEEKDADLARL EAAAATEAATFAELA SRDAETATTAAAARLRLEVQALES AE+VRAER+E+ESAANAAVAAGEAKAVRLAEEVEGLLKELAGERQEAEEKLAEARAQELVTGRDH LL LPSAR+LPS
Sbjct: 158 SPHSVRSWMGQSLAEGPDPRGSRGRSVPTQMRGSGGERDNDAYQAQLAEVLGRWEAERAKTAELQGRAAAAAGLHDRVRSSPGTASLAQAELEEARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKGNEDLRSKLEALQTVEARSEEASAAADALRGTLRETEERLERXXXXRRQSEGLRSKEAEDARESLQAARKALEETEADAAERSRERSARAAGLQDVLXXXXXXXXXXXXXXXXXXXXXXXXXXELRELRSRDAGYVRELKERADEIAELNQALSQLQEEDLQTEEEVGAARALRSENEELQAHLAQALRQASAAESSARAXXXLANKAIEEMVQELQDTRERLRDVEGERSHLEQRLGAVEARVSEAARNRADLSRRLAETAIEAEQAGVENQRLEHRVRSLSETWEADGGGLDLSSSSSSDGRRQSADELPAGGVPPRPLQAASGPAAAQQQHQDLRRQVAALQEHLAAAEXXXXXXXXNAEEAAVRGGTAEAGKASRGKVALTEEPSSVSEAAVGVKDWSEVSLEAARVDQAELKNTVASFRSQLEAALSAAVADKQKMXXXXXXXXXXXAFEADRRVALEREVTALRSRLQQPQHXXXXX------GVGGAEQAGRSAEHERVAGAEASLAELQAVCSRQAEDVAAALKKADAAKGELAAARVSIADLAAASDSSLQGKLDAAERKLEEYAREAAAAQAQAEAILRAEAASVHTALQRRLQEAESRAISLGEELEAALRAKEESDVQTSNTAAVAAAETLKHERAAEEAIATASAAKKAQRDLENRLDEAHEELAAARSRSXXXXXXXXXXXXXXXXXXXXXXAELRAVRDDLGARAREAEATARVAEQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRAWAEAGSRRAGSSLSALQARADGLAARAERAEGALATARADLEAQGSALAAATERAREAEGELEAAVAEHTRAESELRNRLEKDKSEAVENARAKAXXXXXXXXXXXXXXXXXXXXXXXXXDARAGAAEARLARAQGEALAAQEXXXXXXXXXXXXXAVLGAELSAVKHELARARATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAADATEEGLRALLTAAERDADVRSEALAVSEERRAAAGSAHETVLEQSRSEASRLVGELRAQLASKEARAEAAAEALTRERAQAAAVAEDLAKLEVTARDSQSRETGLRGELSAARAAAVXXXXXXXXXXXXXXXEVDRLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAEAFERVEAAXXXXXXXXXXXXXXXXXXXXKAERDLEARSAGLVAEHREREEAVKAAGDVALTAAVAQVKVQLNGEVTMAREQAEASARESAVWRARAEEKDADLARLDEAAAATEAATFAELATSRDAETATTAAAARLRLEVQALESGAEKVRAERQEIESAANAAVAAGEAKAVRLAEEVEGLLKELAGERQEAEEKLAEARAQELVTGRDHILLSLPSARELPS 1679
BLAST of mRNA_E-siliculosus-1a_M_contig81.16354.1 vs. uniprot
Match: A0A6H5JEK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEK7_9PHAE) HSP 1 Score: 1309 bits (3388), Expect = 0.000e+0 Identity = 1120/1582 (70.80%), Postives = 1152/1582 (72.82%), Query Frame = 3
Query: 405 PAPRRGGADGXXXXXXXXXSPHSVRSWMGQSLAEGPDPRGSRGRSVPAQMRGSVGEGDNDAYQAQLAEVLGRWEVERAKTAELQGRAAAAASLRDRVRSSEGAASLAQAELEEAWGQLEAERRRGD------------------------AAEREMSALRXXXXXXXXXXXXRAADNEDLRSKLEALQTVEARSEEASAAADVLRGTLRETEERLKGSEERLRQTEGLRSKEAEDARESLQAARKALEEAEADAAERSRERSARAVGLQDVLRGQGALLAEREERLAEERSGRAAERMELRELRSRDAGYVRELKERADEIAELNQALSQLQEEDVQTAEEVGAARALRSENEELQARLAQALRQASAAESSARAAEDLASNANEEMVQELQDTRERLRDVEGERSHLEQRLGAVEARVSEAARNRADLSRRLAETAIEAEQAGVENQRLEHRVR----------------------------SLSETWEADGGGLDLSSSSSSDGRRQSADELPAGRVPPRPLQAASGPATAQQQHQDLRRQVAALQEHLAAAEAXXXXXXXXAEEAAVRGGTAEAGKASRGKVALTEEPGSVSEAAVGVKDWSEASLEAARVDQAELRDTIASLRSQLXXXXXXXXXXXXXXXXXXXXXXXXXXFEADRRVALEREVTALRSRLQQXXXXXXXXXXXXXXGVGGAEQAGRLAEHERVAEAEASLAEVQAVCSRQAEDVAAALRRADTAEGELAAARASIADLAAAFDSSLQGKLDDAESKLEEYAREAAAAQAETEAVLRAEAASVHTAIQRRLQEAESRAMSLGEELEAALRAKEERDVQASKAAAVAAAEILEQERAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELRAVRDDLGTRAREAEATARAAEQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAEAGSKRAGASLSALQAHANGLTARAERAEGALATARADLEARGSALXXXXXXAREAEGELEAAVAEHTRAESELRNRLEKDKSEAVESARAKAXXXXXXXXXXXXXXXXXXXXXXXXADARAGAAEARLARAQGEALAAQEAESATAAEASSAAALLGAELSAVKQELARARATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADATEEGLRALLTAAERDXXXXXXXXXXXEERRAAAEXAHETALEQSRSEASRLVGELRAQLASKEARAEAAAEALARERAQAATVAEDLAKLEVTARDSQSRETGLRGELSAARAXXXXXXXXXXXXXXXARSEVDRLELEVDELKDEVAHVKATLSAHRSSTAAQGAAHAEAFERVEAAAREAKSVARAAEERLCTALEKAERDLEARSAGLVAEHREREEAVKAAGDVALTEAVAQVTVQRDGEVTMAREQAEASARESAAWRARAEEKDADLARLGEAAAATEAATFAELAASRDAETATTAAAARLRLEVQALESEAERVRAEREEVESAANAAVAAGEAKAVRLAEEVEGLLKELAGERQEAEEKLAEARAQELVT 4994
P GGA SPHSVRSWMGQSLAEGPDPRG RGRSVPA MRGS G GDNDAYQAQLAEVLGRWE ER QAEL+EA QLEAERRRG A+ R AL + DNEDL SKLEALQTVE RSEE RL+ GLRSKEA DARESLQAARKALEEAEADA ERSRERSARA GLQDVLR QGALLAEREERLAEERSGRAAERMELRELRSRDAGYVRELKERADEIAELN+ALSQLQEEDVQTAEEVG+ARALRSENEELQARLAQALRQASAAESSARAAE LAS ANEE+V EL+DTRERLRDVEGERSHLEQRLGAVEARVSEAARNRADLSRRL ETAIEAEQAGVENQRLEHRVR SLSETWEADGGGLDLSS VP RPLQAASG QVAALQEHLAAAEA AEEAAV GGTAE GKASRGKVALTEEPGSVSEAAVGVKDW +ASLEAAR DQAELRDTIASLRSQL XXXXXXXXXXXXX FEADRRVALEREVT LRSRLQQ XXXXXXX GVGGAEQAGR AEHERV EAEASLAE+QAVCSRQAEDVAAALRRAD AEGELAAARASIADLAAA D+SL+GKLD AESKLEEYAREA AAQAE +AV+RAEAASVHTA+QRRL+EAESRA+SLGEELEAALRAKEERDV ASKAAA E L+ ERA XXXXXXXXX XXXXXXX AELRAVRDDLGTRAREAEATARAAEQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAEAGSKRAGASLSALQA ANGL AR XXXXXX REAEGELEAAVA HTRAESELR+RLEKDKSEAV SARAKAXXXXXXXXXXXXXXXXXXXXXXXX RAGAAE RLARAQGEALAA AALLGAELSAVKQELA+ARA XXXXXXXXXXXXXXX XXXXXXXXXXXXX XXXXXXXXXXX X HETALE SRSEASRLV ELRAQLASKEARA+AAAEALARER QAA VAEDLAKL+VTARD+QSRE L+GELSAARA XXXXXXXXXX ARSEVDRLELE ATLSAHRSS AAQGAAHAEAFERVEAAAREAKS ARA EERLC ALEKAERDLEARSAGL+AEHREREEAVKAAGDVALTEAVAQVT+Q D EVT ARE AEASARESAAWRARAEEKDA+LAR EAAA TEAAT AELAASRDAE ARL+LEVQALESEAERVRAE +EVES ANAAVAAG+AKAVRL EEVEGL KELA ERQEAEEKL EARAQ L++
Sbjct: 116 PGGGEGGAAEGGGVAEWGSSPHSVRSWMGQSLAEGPDPRGCRGRSVPA-MRGSGGRGDNDAYQAQLAEVLGRWEAERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAELDEAREQLEAERRRGXXXXXXXXXXXXXXXRHDDELRMLCASRRGTGALFRQVDAHKRKIEALSNDNEDLLSKLEALQTVEKRSEE-----------------RLEXXXXXXXXXXGLRSKEAHDARESLQAARKALEEAEADATERSRERSARAAGLQDVLREQGALLAEREERLAEERSGRAAERMELRELRSRDAGYVRELKERADEIAELNEALSQLQEEDVQTAEEVGSARALRSENEELQARLAQALRQASAAESSARAAEALASKANEELVHELRDTRERLRDVEGERSHLEQRLGAVEARVSEAARNRADLSRRLVETAIEAEQAGVENQRLEHRVRVISRALSLDRRFVLAHLLFWLVHWLMVQSLSETWEADGGGLDLSSXXXXXXXXXXXXXXXXXXVPLRPLQAASGXXXXXXXXXXXXXQVAALQEHLAAAEARAAAGELNAEEAAVLGGTAEVGKASRGKVALTEEPGSVSEAAVGVKDWPKASLEAAREDQAELRDTIASLRSQLEAALTAAVADKQXXXXXXXXXXXXXAFEADRRVALEREVTTLRSRLQQEQXXXXXXX-----GVGGAEQAGRSAEHERVTEAEASLAELQAVCSRQAEDVAAALRRADAAEGELAAARASIADLAAASDASLRGKLDAAESKLEEYAREATAAQAEAKAVIRAEAASVHTALQRRLREAESRAISLGEELEAALRAKEERDVLASKAAAXXXXETLKHERAXXXXXXXXXXAKKAQRDLENRLDEAHEELAAARARSARAXXXXXXXATDAARRGAEATAELRAVRDDLGTRAREAEATARAAEQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAEAGSKRAGASLSALQARANGLAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREAEGELEAAVAAHTRAESELRDRLEKDKSEAVRSARAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXRAGAAEDRLARAQGEALAAXXXXXXXXXXXXXXAALLGAELSAVKQELAQARAXXXXXXXXXXXXXXXXAELAKEEVLRAEQTASTATAALKHALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHETALEHSRSEASRLVSELRAQLASKEARADAAAEALARERVQAAAVAEDLAKLQVTARDAQSREKSLKGELSAARAAAVAXXXXXXXXXXAARSEVDRLELEXXXXXXXXXXXXATLSAHRSSAAAQGAAHAEAFERVEAAAREAKSAARATEERLCAALEKAERDLEARSAGLIAEHREREEAVKAAGDVALTEAVAQVTLQLDDEVTSAREHAEASARESAAWRARAEEKDANLARRSEAAAVTEAATLAELAASRDAEXXXXXXXARLKLEVQALESEAERVRAEGQEVESVANAAVAAGKAKAVRLGEEVEGLRKELAWERQEAEEKLTEARAQALIS 1674 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig81.16354.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig81.16354.1 >prot_E-siliculosus-1a_M_contig81.16354.1 ID=prot_E-siliculosus-1a_M_contig81.16354.1|Name=mRNA_E-siliculosus-1a_M_contig81.16354.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1521bp MGQSLAEGPDPRGSRGRSVPAQMRGSVGEGDNDAYQAQLAEVLGRWEVERback to top mRNA from alignment at E-siliculosus-1a_M_contig81:622078..632836- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig81.16354.1 ID=mRNA_E-siliculosus-1a_M_contig81.16354.1|Name=mRNA_E-siliculosus-1a_M_contig81.16354.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=10759bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig81:622078..632836- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig81:622078..632836- >mRNA_E-siliculosus-1a_M_contig81.16354.1 ID=mRNA_E-siliculosus-1a_M_contig81.16354.1|Name=mRNA_E-siliculosus-1a_M_contig81.16354.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=9126bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig81:622078..632836- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |