mRNA_E-siliculosus-1a_M_contig80.16233.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig80.16233.1
Unique NamemRNA_E-siliculosus-1a_M_contig80.16233.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig80.16233.1 vs. uniprot
Match: D8LS19_ECTSI (EF-hand domain-containing protein n=7 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS19_ECTSI)

HSP 1 Score: 657 bits (1695), Expect = 1.320e-235
Identity = 357/412 (86.65%), Postives = 380/412 (92.23%), Query Frame = 1
Query:    1 MAPLSATMIPLLALSLGSTTAFVAPTGRGASWSLANPQRAVRSSTSTASTRYNARRPSSATTPTSSLRMVSEVAEQKAAKLRETAAAFRAEXXXXXXXXXXERRENAQRSFNTFDSNKDGSVDIAELKAGLESPLRRSFTKTLQARMGRKPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREDERLARMEERQRRMDDKMRPDAGAVVVSPGDVNDGPATTADKALSALPYLLPLADGILFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLIGFFSLSVGSSNPQVNKLVRFNMQQAINLDIALILPGVVGAITGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQQEGD 1236
            MAP++AT++PL+ L +GSTTAFV PTGRGASWSLANPQ AVRSSTS  +TR+NARR SSAT  TSSLRMVSEVAEQ+AAKLRETAAAFRAE          ERRENAQRSFNTFDSNKDGSVD+AELKAGLE PLRRSFTKTLQARMGRKPSKEEVD+RIAGLPGGTLFPD+LALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQRE+ER+ARME       D+MRPDAG VVVSPGDVNDGPATTADKALSALPY+LPLADG++FAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLIGFFSLS+ SSNPQ+NKLVRFNMQQAINLDIALILPGVVGAITGAVLG+DA KLAPLANA SDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQ+ G+
Sbjct:    1 MAPITATIVPLVTLFVGSTTAFVTPTGRGASWSLANPQHAVRSSTSAVATRHNARRRSSATPATSSLRMVSEVAEQRAAKLRETAAAFRAEAAELEQKQARERRENAQRSFNTFDSNKDGSVDVAELKAGLEGPLRRSFTKTLQARMGRKPSKEEVDDRIAGLPGGTLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXDRMRPDAGTVVVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLIGFFSLSIWSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANASSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQEGGE 412          
BLAST of mRNA_E-siliculosus-1a_M_contig80.16233.1 vs. uniprot
Match: D7FRG5_ECTSI (EF-hand domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG5_ECTSI)

HSP 1 Score: 637 bits (1644), Expect = 4.590e-228
Identity = 362/388 (93.30%), Postives = 372/388 (95.88%), Query Frame = 1
Query:    1 MAPLSATMIPLLALSLGSTTAFVAPTGRGASWSLANPQRAVRSSTSTASTRYNARRPSSATTPTSSLRMVSEVAEQKAAKLRETAAAFRAEXXXXXXXXXXERRENAQRSFNTFDSNKDGSVDIAELKAGLESPLRRSFTKTLQARMGRKPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREDERLARMEERQRRMDDKMRPDAGAVVVSPGDVNDGPATTADKALSALPYLLPLADGILFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLIGFFSLSVGSSNPQVNKLVRFNMQQAINLDIALILPGVVGAITGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATG 1164
            MAPLSAT IPLLALSLGSTTAFVAP GRGASWSLANPQRAVRSSTS A+TR+N  R SSA   TSSLRMVS+VAEQKAAKLRETAAAFRAEXXXXXXXX  ERRENA RSFNTFDSNKDGSVDIAELKAGLESPLRRSFTKTLQARMGRKPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENL SQQREDERLAR+EERQR+MDDKMRPD GAVVVSPGDVNDGPATTADKALSALPYLLPL DGILFAAHLFGAFPEQTAWAQPLAAVLLALRS+PFATLIGFFSLS+GSSNP+VNKLVRFNMQQAINLDIALILPGVVGAITG +LGADAVKLAPL+NAGSDVVFVALLAAVAYSVGTSATG
Sbjct:    1 MAPLSATTIPLLALSLGSTTAFVAPIGRGASWSLANPQRAVRSSTSAAATRHNTLRRSSAMPATSSLRMVSKVAEQKAAKLRETAAAFRAEXXXXXXXXARERRENALRSFNTFDSNKDGSVDIAELKAGLESPLRRSFTKTLQARMGRKPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLLSQQREDERLARLEERQRQMDDKMRPDTGAVVVSPGDVNDGPATTADKALSALPYLLPLVDGILFAAHLFGAFPEQTAWAQPLAAVLLALRSLPFATLIGFFSLSIGSSNPRVNKLVRFNMQQAINLDIALILPGVVGAITGGMLGADAVKLAPLSNAGSDVVFVALLAAVAYSVGTSATG 388          
BLAST of mRNA_E-siliculosus-1a_M_contig80.16233.1 vs. uniprot
Match: D8LS20_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS20_ECTSI)

HSP 1 Score: 545 bits (1405), Expect = 1.090e-191
Identity = 296/345 (85.80%), Postives = 316/345 (91.59%), Query Frame = 1
Query:    1 MAPLSATMIPLLALSLGSTTAFVAPTGRGASWSLANPQRAVRSSTSTASTRYNARRPSSATTPTSSLRMVSEVAEQKAAKLRETAAAFRAEXXXXXXXXXXERRENAQRSFNTFDSNKDGSVDIAELKAGLESPLRRSFTKTLQARMGRKPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREDERLARMEERQRRMDDKMRPDAGAVVVSPGDVNDGPATTADKALSALPYLLPLADGILFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLIGFFSLSVGSSNPQVNKLVRFNMQQAINLDIALILPGVVG 1035
            MAP++AT++PL+ L +GSTTAFV PTGRGASWSLANPQ AVRSSTS  +TR+NARR SSAT  TSSLRMVSEVAEQ+AAKLRETAAAFRAE          ERRENAQRSFNTFDSNKDGSVD+AELKAGLE PLRRSFTKTLQARMGRKPSKEEVD+RIAGLPGGTLFPD+LALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQRE+ER+ARME       D+MRPDAG VVVSPGDVNDGPATTADKALSALPY+LPLADG++FAAHLFGAF EQTAWAQPLAAVLLALRSVPFATLIGFFSLS+GSSNPQ+NKLVRFNMQQAINLDIALILPGVVG
Sbjct:    1 MAPITATIVPLVTLFVGSTTAFVTPTGRGASWSLANPQHAVRSSTSAVATRHNARRRSSATPATSSLRMVSEVAEQRAAKLRETAAAFRAEAAELEQKQARERRENAQRSFNTFDSNKDGSVDVAELKAGLEGPLRRSFTKTLQARMGRKPSKEEVDDRIAGLPGGTLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXDRMRPDAGTVVVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFLEQTAWAQPLAAVLLALRSVPFATLIGFFSLSIGSSNPQINKLVRFNMQQAINLDIALILPGVVG 345          
BLAST of mRNA_E-siliculosus-1a_M_contig80.16233.1 vs. uniprot
Match: A0A2I6U1M4_SACJA (Tic20-like protein n=15 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1M4_SACJA)

HSP 1 Score: 519 bits (1337), Expect = 3.770e-181
Identity = 298/417 (71.46%), Postives = 334/417 (80.10%), Query Frame = 1
Query:    1 MAPLSATMIPLLALSLGSTTAFVAPTGRGASWSLANPQRAVRSSTSTASTRYNARRPSSA----TTPTSSLRMVSEVAEQKAAKLRETAAAFRAEXXXXXXXXXXERRENAQRSFNTFDSNKDGSVDIAELKAGLESPLRRSFTKTLQARMGRKPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREDERLARMEERQRRMDDKMRPDAGA---VVVSPGDVNDGPATTADKALSALPYLLPLADGILFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLIGFFSLSVGSSNPQVNKLVRFNMQQAINLDIALILPGVVGAITGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQQE 1230
            MAP ++++IPLLAL LGSTTAFV PTGRGASWSL + Q+   SST TA  R   RR S       T TSS     EVA++KAA+LRETAAAFRA+          ER+  A+RSFN+FDSN+DG+VDI ELKAGLE PLRRSF K L ARMGRKP +EE+D RIA LPGG+LFPD+LA KLI TYDQNGDGLLQ+SEFAPTEELRTRLEN+F  Q+E  R AR+EERQR+M+DK+  + G     VV  G VNDGPAT ADKALSALPYLLPL DGI FA HLFGAFPEQTAWAQPLAAVLLALRS+PFATL+GFFSLS  S NPQVNKLVRFNMQQAINLDIALI+PGV+GA+    LG DA KL PLA AGSDVVFVA+LAAVAYSV TS+TGSFPNKLPLLGRLNRENPD ++E
Sbjct:    1 MAPFTSSIIPLLALLLGSTTAFVTPTGRGASWSLPSVQQ---SSTFTAVARQAIRRSSPCLSMMATGTSS---EVEVAQEKAARLRETAAAFRAQAAELEDKRTQERQAGAERSFNSFDSNQDGAVDIVELKAGLEGPLRRSFVKQLTARMGRKPDREEIDARIAALPGGSLFPDDLARKLIDTYDQNGDGLLQRSEFAPTEELRTRLENMFRDQQETARQARVEERQRQMEDKLAAEVGTGAGAVVPAGGVNDGPATAADKALSALPYLLPLVDGISFAGHLFGAFPEQTAWAQPLAAVLLALRSLPFATLVGFFSLSALSGNPQVNKLVRFNMQQAINLDIALIVPGVLGALASVSLGQDAYKLVPLAEAGSDVVFVAMLAAVAYSVVTSSTGSFPNKLPLLGRLNRENPDREEE 411          
BLAST of mRNA_E-siliculosus-1a_M_contig80.16233.1 vs. uniprot
Match: A0A6H5JBJ0_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ0_9PHAE)

HSP 1 Score: 429 bits (1104), Expect = 2.140e-147
Identity = 244/302 (80.79%), Postives = 248/302 (82.12%), Query Frame = 1
Query:  331 FNTFDSNKDGSVDIAELKAGLESPLRRSFTKTLQARMGRKPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREDERLARMEERQRRMDDKMRPDAGAVVVSPGDVNDGPATTADKALSALPYLLPLADGILFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLIGFFSLSVGS-SNPQVNKLVRFNMQQAINLDIALILPGVVGAITGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQQEG 1233
            FNTFDSNKDGSVDIAELKAGLESPLRR  TKTLQARMGRKPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQ SEFAPTEELRTRLE+LFSQQREDER+ARMEERQRRMDDKMRPD GAVV                                            TAWAQPLAAVLLALRSVPFATLIGFFSLSV    NPQVNKLVRFN QQAIN+DIALILPGVVGAI GAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENP+NQQEG
Sbjct:   47 FNTFDSNKDGSVDIAELKAGLESPLRRGLTKTLQARMGRKPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQLSEFAPTEELRTRLEDLFSQQREDERVARMEERQRRMDDKMRPDTGAVV--------------------------------------------TAWAQPLAAVLLALRSVPFATLIGFFSLSVHRLRNPQVNKLVRFNTQQAINVDIALILPGVVGAIAGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPENQQEG 304          
BLAST of mRNA_E-siliculosus-1a_M_contig80.16233.1 vs. uniprot
Match: A0A6H5KUU9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU9_9PHAE)

HSP 1 Score: 399 bits (1025), Expect = 7.010e-136
Identity = 212/236 (89.83%), Postives = 225/236 (95.34%), Query Frame = 1
Query:  529 LIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREDERLARMEERQRRMDDKMRPDAGAVVVSPGDVNDGPATTADKALSALPYLLPLADGILFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLIGFFSLSVGSSNPQVNKLVRFNMQQAINLDIALILPGVVGAITGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQQEGD 1236
            L+++YDQNGDGLLQQSEFAPTEELRTRLENLFSQQRE+ER+ARME        KMRPDAGAV VSPGDVNDGPATTADKALSALPY+LPLADG++FAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATL+GFFSLSVGSSNPQ+NKLVRFNMQQAINLDIALILPGVVGAITGAVLG+DA KLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQ+ G+
Sbjct:   40 LVRSYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXXKMRPDAGAVEVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLVGFFSLSVGSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQEGGE 275          
BLAST of mRNA_E-siliculosus-1a_M_contig80.16233.1 vs. uniprot
Match: A0A6H5KCI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI4_9PHAE)

HSP 1 Score: 359 bits (921), Expect = 1.180e-120
Identity = 202/258 (78.29%), Postives = 210/258 (81.40%), Query Frame = 1
Query:  469 DERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREDERLARMEERQRRMDDKMRPDAGAVVVSPGDVNDGPATTADKALSALPYLLPLADGILFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLIGFFSLSVGSSNPQVNKLVRFNMQQAINLDIALILPGVVGAITGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQQEGDGE 1242
            DERIAGLPGGTLFPDELALKLIQTYD NG+GLLQQSEFAPTEELRTRLENLFSQQRE++RLARMEERQR+MDD MRPDAGAVVVSPGDVNDG   TAD ALSALPYLLPLADGI+FAAHLFG FPEQTAWAQPLAA                                      AIN+DIALILPGVVGAI GAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFP+KLPLLGRLNRENP N+QEGD E
Sbjct:   21 DERIAGLPGGTLFPDELALKLIQTYDHNGNGLLQQSEFAPTEELRTRLENLFSQQREEKRLARMEERQRQMDDNMRPDAGAVVVSPGDVNDGLVNTADNALSALPYLLPLADGIVFAAHLFGVFPEQTAWAQPLAA--------------------------------------AINVDIALILPGVVGAIAGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPSKLPLLGRLNRENPGNEQEGDEE 240          
BLAST of mRNA_E-siliculosus-1a_M_contig80.16233.1 vs. uniprot
Match: A0A6H5KVD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD7_9PHAE)

HSP 1 Score: 342 bits (876), Expect = 1.550e-114
Identity = 180/193 (93.26%), Postives = 189/193 (97.93%), Query Frame = 1
Query:  658 MEERQRRMDDKMRPDAGAVVVSPGDVNDGPATTADKALSALPYLLPLADGILFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLIGFFSLSVGSSNPQVNKLVRFNMQQAINLDIALILPGVVGAITGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQQEGD 1236
            MEERQR+MDDKMRPDAGAV VSPGDVNDGPATTADKALSALPY+LPLADG++FAAHLFGAFPEQTAWA+PL AVLLALRSVPFATLIGFFSLSVGSSNPQ+NKLVRFNMQQAINLDIALILPGVVGAITGAVLG+DA KLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQ+ G+
Sbjct:    1 MEERQRQMDDKMRPDAGAVEVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAEPLVAVLLALRSVPFATLIGFFSLSVGSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQEGGE 193          
BLAST of mRNA_E-siliculosus-1a_M_contig80.16233.1 vs. uniprot
Match: A0A6H5JY95_9PHAE (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY95_9PHAE)

HSP 1 Score: 333 bits (854), Expect = 4.070e-108
Identity = 210/408 (51.47%), Postives = 279/408 (68.38%), Query Frame = 1
Query:    1 MAPLSATMIPLLALSLGSTTAFVAPTGRGAS-WSLANPQRAVRSSTSTASTRYNARRPSSATTPTSSLRMVSEVAEQKAAKLRETAAAFRAEXXXXXXXXXXERRE----NAQRSFNTFDSNKDGSVDIAELKAGLESPLRRSFTKTLQARMGRKPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREDERLARMEERQRRMDDKMRPDAGAVV-VSPGDVNDGPATTADKALSALPYLLPLADGILFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLIGFFSLSVGSSNPQVNKLVRFNMQQAINLDIALILPGVVGAITGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNR 1206
            MAP++A+  PL+AL LGSTTAF+AP+GRG S W   N Q+    + S  S     RRP SA      ++M +  A                 XXXXXXXXXX         A RSF  FDSNKDG+V +AELKAGLE PL+++FTK L ARMGRKP+ EEV+ +I  LPG  LFPD+LA +LI+ YDQNGDG+LQQSEFAPTEELR RLE++F ++RE+E  AR  ER+R MD K       +  V+  D     AT+ +KAL ALPY+LPL+DGI++A H++  FP+Q AW++PL A+L+A+ ++PFATL+ FF +S+ SSN  +NKL+RFNM QAIN DIALI+P V G +    LG+DA K++P+ +  +D++ V+L+ AVAYS+  SATG+ PNK+P  G++NR
Sbjct:    1 MAPVTASTFPLVALFLGSTTAFLAPSGRGTSTWCGPNAQQQSARAGSITS-----RRPYSAV-----IQMATGDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADRSFAAFDSNKDGAVGVAELKAGLEGPLKKTFTKQLTARMGRKPTPEEVEAKILELPGRALFPDDLAERLIKLYDQNGDGVLQQSEFAPTEELRARLESIFRERREEELEARQAERKREMDAKTTGKGKMLSSVADSDREAASATSLEKALCALPYILPLSDGIVYAQHIYSTFPQQMAWSEPLVAILIAVNNLPFATLVAFFGMSILSSNQNINKLLRFNMLQAINFDIALIVPSVFGPLLTWSLGSDAYKISPVTDIATDILSVSLVLAVAYSIAASATGAIPNKIPFFGKINR 398          
BLAST of mRNA_E-siliculosus-1a_M_contig80.16233.1 vs. uniprot
Match: A0A6H5KKK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK9_9PHAE)

HSP 1 Score: 290 bits (743), Expect = 1.190e-94
Identity = 151/170 (88.82%), Postives = 160/170 (94.12%), Query Frame = 1
Query:  439 MGRKPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREDERLARMEERQRRMDDKMRPDAGAVVVSPGDVNDGPATTADKALSALPYLLPLADGILFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLIGFFSLSVGSS 948
            MGRKPSK+E DERIAGLPGGTLFPDELALKLIQTYD NG+GLLQQSEFAPTEELRTRLENLFSQQRE++RLARMEERQR+MDD MRPDAGAVVVSPGDVNDG   TAD ALSALPYLLPLADGI+FAAHLFG FPEQTAWAQPLAAVLL LRS+ FATLIGFFSLS+GS+
Sbjct:    1 MGRKPSKKEADERIAGLPGGTLFPDELALKLIQTYDHNGNGLLQQSEFAPTEELRTRLENLFSQQREEKRLARMEERQRQMDDNMRPDAGAVVVSPGDVNDGLVNTADNALSALPYLLPLADGIVFAAHLFGVFPEQTAWAQPLAAVLLTLRSLSFATLIGFFSLSIGSA 170          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig80.16233.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS19_ECTSI1.320e-23586.65EF-hand domain-containing protein n=7 Tax=Ectocarp... [more]
D7FRG5_ECTSI4.590e-22893.30EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
D8LS20_ECTSI1.090e-19185.80EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A2I6U1M4_SACJA3.770e-18171.46Tic20-like protein n=15 Tax=Saccharina japonica Ta... [more]
A0A6H5JBJ0_9PHAE2.140e-14780.79EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KUU9_9PHAE7.010e-13689.83Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCI4_9PHAE1.180e-12078.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVD7_9PHAE1.550e-11493.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JY95_9PHAE4.070e-10851.47EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
A0A6H5KKK9_9PHAE1.190e-9488.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig80contigE-siliculosus-1a_M_contig80:185714..187574 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1245
Model size1245
Exons2
Hectar predicted targeting categorychloroplast
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EggNOG OGs2BYWW@1,2QUSD@2759
EggNOG free text desc.protein transport
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0009507,GO:0009526,GO:0009528,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009706,GO:0009941,GO:0016020,GO:0019866,GO:0031090,GO:0031967,GO:0031969,GO:0031975,GO:0031976,GO:0031984,GO:0034357,GO:0042170,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0055035
Seed eggNOG ortholog2880.D8LS22
Seed ortholog evalue1.5e-188
Seed ortholog score665.6
Taxonomic scopeEukaryota
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936206.9719543-CDS-E-siliculosus-1a_M_contig80:185713..1864931622936206.9719543-CDS-E-siliculosus-1a_M_contig80:185713..186493Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 185714..186493 -
1696250977.6016717-CDS-E-siliculosus-1a_M_contig80:185713..1864931696250977.6016717-CDS-E-siliculosus-1a_M_contig80:185713..186493Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 185714..186493 -
1622936206.9904828-CDS-E-siliculosus-1a_M_contig80:187109..1875741622936206.9904828-CDS-E-siliculosus-1a_M_contig80:187109..187574Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 187110..187574 -
1696250977.6135852-CDS-E-siliculosus-1a_M_contig80:187109..1875741696250977.6135852-CDS-E-siliculosus-1a_M_contig80:187109..187574Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig80 187110..187574 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig80.16233.1prot_E-siliculosus-1a_M_contig80.16233.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig80 185714..187574 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig80.16233.1

>prot_E-siliculosus-1a_M_contig80.16233.1 ID=prot_E-siliculosus-1a_M_contig80.16233.1|Name=mRNA_E-siliculosus-1a_M_contig80.16233.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=415bp
MAPLSATMIPLLALSLGSTTAFVAPTGRGASWSLANPQRAVRSSTSTAST
RYNARRPSSATTPTSSLRMVSEVAEQKAAKLRETAAAFRAEAAELEEKRA
RERRENAQRSFNTFDSNKDGSVDIAELKAGLESPLRRSFTKTLQARMGRK
PSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQQSEFAPTEEL
RTRLENLFSQQREDERLARMEERQRRMDDKMRPDAGAVVVSPGDVNDGPA
TTADKALSALPYLLPLADGILFAAHLFGAFPEQTAWAQPLAAVLLALRSV
PFATLIGFFSLSVGSSNPQVNKLVRFNMQQAINLDIALILPGVVGAITGA
VLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRL
NRENPDNQQEGDGE*
back to top

mRNA from alignment at E-siliculosus-1a_M_contig80:185714..187574-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig80.16233.1 ID=mRNA_E-siliculosus-1a_M_contig80.16233.1|Name=mRNA_E-siliculosus-1a_M_contig80.16233.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=1861bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig80:185714..187574- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGCACCCCTCTCAGCAACCATGATTCCACTTCTGGCCCTCTCCCTTGG CTCCACCACCGCCTTCGTTGCCCCAACCGGTCGTGGCGCCTCGTGGTCCC TGGCCAACCCTCAGCGTGCCGTCAGGTCGTCCACATCGACCGCATCCACG CGCTACAACGCCCGCCGCCCGTCATCAGCAACAACACCGACATCTTCTCT CCGCATGGTGAGCGAGGTCGCGGAGCAGAAGGCGGCCAAGCTCCGAGAGA CCGCGGCCGCCTTCCGCGCGGAAGCTGCCGAGCTGGAGGAGAAGCGGGCG CGAGAGCGACGCGAGAACGCCCAGCGATCTTTCAACACCTTCGACTCCAA CAAGGACGGGTCGGTGGACATCGCCGAGCTCAAGGCAGGTCTCGAGAGCC CGCTGCGTCGGAGCTTCACGAAGACGCTGCAGGCTCGCATGGGGCGGAAG CCGTCGAAAGAAGAGGTGAGTCGAGAGAGTAGTTGTAGCAGGGATCGGAT TTGGCGAAGTATTCACACTGCTGTGTCCATACAGTAGGTTGGATGTTTTG CGTGAGTGAGCTACAGTAGTGTCGAGTTCCAGGCAGTGTAGATGACGGTG GCTGCAGCGACTGTTTTGTTCGTTTCCGATCATCGGCCTAAATGTTCCTA TAATTTCCTTCTGGACCAAAAGACGCTTTGGGCACCACCTCACACTTGAG AAATTGTCCACGTCAAACTCTCCATGCAATCGGATTATTCCTGTATACGC TCTACAACAACCAATGCACCTTTAGACCGTACCCCCTGTCCCCGTCGATG ATTGGCTGCTCTTCGCCGTTGCCCTGCACTATTGCTGTTGATGTAGGGCT ACGTGCCCCACGTCCTGAGTCTCAGTTGGTTGATAGAAAAATGATCCGGG GTTGTCTTCGAAGCAAGCGTGGGATTCTTGCTTGACATCCGGTTTCAACA TATCGCCCTATGTCGCACGCACCCATCCATCTCTGCATCTCTCTCCCGAA ATCACCGAACAACGCTCACCATATACCCCCGCACCCTCCAATCCTACCCT TCATCATCCCGTCGTATTCATAAAATCTCAGGTGGACGAGCGCATCGCCG GACTCCCGGGAGGTACCCTCTTCCCCGACGAACTCGCACTCAAGCTCATC CAGACCTACGACCAGAACGGGGACGGCCTGCTGCAGCAGTCAGAGTTCGC CCCAACGGAGGAGCTCAGGACGAGGCTCGAGAACCTCTTCAGCCAGCAGC GGGAGGACGAGCGCCTGGCGCGCATGGAGGAGCGCCAGCGCCGGATGGAC GACAAGATGAGGCCGGACGCGGGGGCGGTGGTGGTGTCTCCCGGCGATGT CAACGACGGCCCGGCCACTACCGCCGACAAGGCGCTGTCCGCGCTGCCGT ACCTGCTCCCGCTGGCTGATGGCATCTTGTTCGCCGCCCACCTGTTCGGC GCGTTCCCAGAGCAGACGGCGTGGGCGCAGCCGCTGGCCGCCGTGCTGCT GGCGCTGCGGTCCGTGCCGTTCGCGACTCTGATCGGGTTCTTCAGCCTGT CCGTCGGGTCCAGCAACCCGCAGGTCAACAAGCTCGTGAGGTTCAACATG CAGCAGGCCATCAACCTGGACATCGCTCTGATCTTGCCGGGGGTGGTGGG TGCGATCACGGGGGCGGTGTTGGGGGCCGACGCTGTCAAGCTGGCGCCTT TGGCGAACGCGGGGTCGGACGTGGTGTTTGTGGCGTTGTTGGCGGCCGTG GCGTACTCCGTGGGCACTTCGGCGACGGGGTCGTTCCCGAACAAGCTTCC GTTGTTGGGGCGCTTGAACCGCGAGAACCCCGACAACCAGCAGGAGGGCG ACGGGGAGTAG
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig80:185714..187574-

>mRNA_E-siliculosus-1a_M_contig80.16233.1 ID=mRNA_E-siliculosus-1a_M_contig80.16233.1|Name=mRNA_E-siliculosus-1a_M_contig80.16233.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2490bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig80:185714..187574- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGCACCCCTCTCAGCAACCATGATTCCACTTCTGGCCCTCTCCCTTGG
CTCCACCACCGCCTTCGTTGCCCCAACCGGTCGTGGCGCCTCGTGGTCCC
TGGCCAACCCTCAGCGTGCCGTCAGGTCGTCCACATCGACCGCATCCACG
CGCTACAACGCCCGCCGCCCGTCATCAGCAACAACACCGACATCTTCTCT
CCGCATGGTGAGCGAGGTCGCGGAGCAGAAGGCGGCCAAGCTCCGAGAGA
CCGCGGCCGCCTTCCGCGCGGAAGCTGCCGAGCTGGAGGAGAAGCGGGCG
CGAGAGCGACGCGAGAACGCCCAGCGATCTTTCAACACCTTCGACTCCAA
CAAGGACGGGTCGGTGGACATCGCCGAGCTCAAGGCAGGTCTCGAGAGCC
CGCTGCGTCGGAGCTTCACGAAGACGCTGCAGGCTCGCATGGGGCGGAAG
CCGTCGAAAGAAGAGATGGCACCCCTCTCAGCAACCATGATTCCACTTCT
GGCCCTCTCCCTTGGCTCCACCACCGCCTTCGTTGCCCCAACCGGTCGTG
GCGCCTCGTGGTCCCTGGCCAACCCTCAGCGTGCCGTCAGGTCGTCCACA
TCGACCGCATCCACGCGCTACAACGCCCGCCGCCCGTCATCAGCAACAAC
ACCGACATCTTCTCTCCGCATGGTGAGCGAGGTCGCGGAGCAGAAGGCGG
CCAAGCTCCGAGAGACCGCGGCCGCCTTCCGCGCGGAAGCTGCCGAGCTG
GAGGAGAAGCGGGCGCGAGAGCGACGCGAGAACGCCCAGCGATCTTTCAA
CACCTTCGACTCCAACAAGGACGGGTCGGTGGACATCGCCGAGCTCAAGG
CAGGTCTCGAGAGCCCGCTGCGTCGGAGCTTCACGAAGACGCTGCAGGCT
CGCATGGGGCGGAAGCCGTCGAAAGAAGAGGTGGACGAGCGCATCGCCGG
ACTCCCGGGAGGTACCCTCTTCCCCGACGAACTCGCACTCAAGCTCATCC
AGACCTACGACCAGAACGGGGACGGCCTGCTGCAGCAGTCAGAGTTCGCC
CCAACGGAGGAGCTCAGGACGAGGCTCGAGAACCTCTTCAGCCAGCAGCG
GGAGGACGAGCGCCTGGCGCGCATGGAGGAGCGCCAGCGCCGGATGGACG
ACAAGATGAGGCCGGACGCGGGGGCGGTGGTGGTGTCTCCCGGCGATGTC
AACGACGGCCCGGCCACTACCGCCGACAAGGCGCTGTCCGCGCTGCCGTA
CCTGCTCCCGCTGGCTGATGGCATCTTGTTCGCCGCCCACCTGTTCGGCG
CGTTCCCAGAGCAGACGGCGTGGGCGCAGCCGCTGGCCGCCGTGCTGCTG
GCGCTGCGGTCCGTGCCGTTCGCGACTCTGATCGGGTTCTTCAGCCTGTC
CGTCGGGTCCAGCAACCCGCAGGTCAACAAGCTCGTGAGGTTCAACATGC
AGCAGGCCATCAACCTGGACATCGCTCTGATCTTGCCGGGGGTGGTGGGT
GCGATCACGGGGGCGGTGTTGGGGGCCGACGCTGTCAAGCTGGCGCCTTT
GGCGAACGCGGGGTCGGACGTGGTGTTTGTGGCGTTGTTGGCGGCCGTGG
CGTACTCCGTGGGCACTTCGGCGACGGGGTCGTTCCCGAACAAGCTTCCG
TTGTTGGGGCGCTTGAACCGCGAGAACCCCGACAACCAGCAGGAGGGCGA
CGGGGAGTAGGTGGACGAGCGCATCGCCGGACTCCCGGGAGGTACCCTCT
TCCCCGACGAACTCGCACTCAAGCTCATCCAGACCTACGACCAGAACGGG
GACGGCCTGCTGCAGCAGTCAGAGTTCGCCCCAACGGAGGAGCTCAGGAC
GAGGCTCGAGAACCTCTTCAGCCAGCAGCGGGAGGACGAGCGCCTGGCGC
GCATGGAGGAGCGCCAGCGCCGGATGGACGACAAGATGAGGCCGGACGCG
GGGGCGGTGGTGGTGTCTCCCGGCGATGTCAACGACGGCCCGGCCACTAC
CGCCGACAAGGCGCTGTCCGCGCTGCCGTACCTGCTCCCGCTGGCTGATG
GCATCTTGTTCGCCGCCCACCTGTTCGGCGCGTTCCCAGAGCAGACGGCG
TGGGCGCAGCCGCTGGCCGCCGTGCTGCTGGCGCTGCGGTCCGTGCCGTT
CGCGACTCTGATCGGGTTCTTCAGCCTGTCCGTCGGGTCCAGCAACCCGC
AGGTCAACAAGCTCGTGAGGTTCAACATGCAGCAGGCCATCAACCTGGAC
ATCGCTCTGATCTTGCCGGGGGTGGTGGGTGCGATCACGGGGGCGGTGTT
GGGGGCCGACGCTGTCAAGCTGGCGCCTTTGGCGAACGCGGGGTCGGACG
TGGTGTTTGTGGCGTTGTTGGCGGCCGTGGCGTACTCCGTGGGCACTTCG
GCGACGGGGTCGTTCCCGAACAAGCTTCCGTTGTTGGGGCGCTTGAACCG
CGAGAACCCCGACAACCAGCAGGAGGGCGACGGGGAGTAG
back to top