mRNA_E-siliculosus-1a_M_contig80.16224.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig80.16224.1 vs. uniprot
Match: A0A6H5JY95_9PHAE (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY95_9PHAE) HSP 1 Score: 644 bits (1662), Expect = 4.040e-226 Identity = 390/406 (96.06%), Postives = 397/406 (97.78%), Query Frame = 2
Query: 71 MAPVTASTFPLVALFLGSTTAFLAPSGRSASTWCGPNAQQQHQSARAGSITRRRPSSAVLQMATGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADRSFAAFDSDKDGAVGVAELKAGLEGPLKKTFTKQLTTRMGRKPTPEEVEAKILELPGGALFPDDLAERLIKLYDQNGDGVLQQSEFAPTEELRARLESIFRERREEELEARQAERKREMDAKTKGKGKMLSSVADSDREAASATSLEKALCALPYILPLSDGIVYAQHIYSTFPQQMAWSEPLVAILVAVNNLPFATLVAFFGMSILSSNQNINKLLRFNMLQAINFDIALIVPSVFGPLLTWSLGSDAYKISPMTDIATDIISVSLVLAVAYSISASATGAIPNKIPFFGKINRVTRDDS 1288
MAPVTASTFPLVALFLGSTTAFLAPSGR STWCGPNAQQQ SARAGSIT RRP SAV+QMATGD+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADRSFAAFDS+KDGAVGVAELKAGLEGPLKKTFTKQLT RMGRKPTPEEVEAKILELPG ALFPDDLAERLIKLYDQNGDGVLQQSEFAPTEELRARLESIFRERREEELEARQAERKREMDAKT GKGKMLSSVADSDREAASATSLEKALCALPYILPLSDGIVYAQHIYSTFPQQMAWSEPLVAIL+AVNNLPFATLVAFFGMSILSSNQNINKLLRFNMLQAINFDIALIVPSVFGPLLTWSLGSDAYKISP+TDIATDI+SVSLVLAVAYSI+ASATGAIPNKIPFFGKINRVTRDDS
Sbjct: 1 MAPVTASTFPLVALFLGSTTAFLAPSGRGTSTWCGPNAQQQ--SARAGSITSRRPYSAVIQMATGDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADRSFAAFDSNKDGAVGVAELKAGLEGPLKKTFTKQLTARMGRKPTPEEVEAKILELPGRALFPDDLAERLIKLYDQNGDGVLQQSEFAPTEELRARLESIFRERREEELEARQAERKREMDAKTTGKGKMLSSVADSDREAASATSLEKALCALPYILPLSDGIVYAQHIYSTFPQQMAWSEPLVAILIAVNNLPFATLVAFFGMSILSSNQNINKLLRFNMLQAINFDIALIVPSVFGPLLTWSLGSDAYKISPVTDIATDILSVSLVLAVAYSIAASATGAIPNKIPFFGKINRVTRDDS 404
BLAST of mRNA_E-siliculosus-1a_M_contig80.16224.1 vs. uniprot
Match: A0A2I6U1M4_SACJA (Tic20-like protein n=15 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1M4_SACJA) HSP 1 Score: 358 bits (919), Expect = 6.180e-114 Identity = 205/411 (49.88%), Postives = 271/411 (65.94%), Query Frame = 2
Query: 71 MAPVTASTFPLVALFLGSTTAFLAPSGRSASTWCGPNAQQQHQSARAGSITRRRPSSAVLQMATGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GADRSFAAFDSDKDGAVGVAELKAGLEGPLKKTFTKQLTTRMGRKPTPEEVEAKILELPGGALFPDDLAERLIKLYDQNGDGVLQQSEFAPTEELRARLESIFRERREEELEARQAERKREMDAKTK-----GKGKMLSSVADSDREAASATSLEKALCALPYILPLSDGIVYAQHIYSTFPQQMAWSEPLVAILVAVNNLPFATLVAFFGMSILSSNQNINKLLRFNMLQAINFDIALIVPSVFGPLLTWSLGSDAYKISPMTDIATDIISVSLVLAVAYSISASATGAIPNKIPFFGKINRVTRD 1282
MAP T+S PL+AL LGSTTAF+ P+GR AS W P+ QQ RR S + MATG S GA+RSF +FDS++DGAV + ELKAGLEGPL+++F KQLT RMGRKP EE++A+I LPGG+LFPDDLA +LI YDQNGDG+LQ+SEFAPTEELR RLE++FR+++E +AR ER+R+M+ K G G ++ + +D A T+ +KAL ALPY+LPL DGI +A H++ FP+Q AW++PL A+L+A+ +LPFATLV FF +S LS N +NKL+RFNM QAIN DIALIVP V G L + SLG DAYK+ P+ + +D++ V+++ AVAYS+ S+TG+ PNK+P G++NR D
Sbjct: 1 MAPFTSSIIPLLALLLGSTTAFVTPTGRGAS-WSLPSVQQSSTFTAVARQAIRRSSPCLSMMATGTSSEVEVAQEKAARLRETAAAFRAQAAELEDKRTQERQAGAERSFNSFDSNQDGAVDIVELKAGLEGPLRRSFVKQLTARMGRKPDREEIDARIAALPGGSLFPDDLARKLIDTYDQNGDGLLQRSEFAPTEELRTRLENMFRDQQETARQARVEERQRQMEDKLAAEVGTGAGAVVPAGGVNDGPA---TAADKALSALPYLLPLVDGISFAGHLFGAFPEQTAWAQPLAAVLLALRSLPFATLVGFFSLSALSGNPQVNKLVRFNMQQAINLDIALIVPGVLGALASVSLGQDAYKLVPLAEAGSDVVFVAMLAAVAYSVVTSSTGSFPNKLPLLGRLNRENPD 407
BLAST of mRNA_E-siliculosus-1a_M_contig80.16224.1 vs. uniprot
Match: D8LS19_ECTSI (EF-hand domain-containing protein n=7 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS19_ECTSI) HSP 1 Score: 342 bits (876), Expect = 1.580e-107 Identity = 204/414 (49.28%), Postives = 270/414 (65.22%), Query Frame = 2
Query: 71 MAPVTASTFPLVALFLGSTTAFLAPSGRSASTWCGPNAQQQHQSARAGSITR---RRPSSAV-----LQMATGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADRSFAAFDSDKDGAVGVAELKAGLEGPLKKTFTKQLTTRMGRKPTPEEVEAKILELPGGALFPDDLAERLIKLYDQNGDGVLQQSEFAPTEELRARLESIFRERREEELEAR-QAERKREMDAKTKGKGKMLSSVADSDREAASATSLEKALCALPYILPLSDGIVYAQHIYSTFPQQMAWSEPLVAILVAVNNLPFATLVAFFGMSILSSNQNINKLLRFNMLQAINFDIALIVPSVFGPLLTWSLGSDAYKISPMTDIATDIISVSLVLAVAYSISASATGAIPNKIPFFGKINRVTRDD 1285
MAP+TA+ PLV LF+GSTTAF+ P+GR AS W N Q +S+ + TR RR SSA L+M + A RSF FDS+KDG+V VAELKAGLEGPL+++FTK L RMGRKP+ EEV+ +I LPGG LFPDDLA +LI+ YDQNGDG+LQQSEFAPTEELR RLE++F ++REEE AR + D G ++ V+ D AT+ +KAL ALPY+LPL+DG+V+A H++ FP+Q AW++PL A+L+A+ ++PFATL+ FF +SI SSN INKL+RFNM QAIN DIALI+P V G + LGSDA K++P+ + ++D++ V+L+ AVAYS+ SATG+ PNK+P G++NR D+
Sbjct: 1 MAPITATIVPLVTLFVGSTTAFVTPTGRGAS-WSLANPQHAVRSSTSAVATRHNARRRSSATPATSSLRMVS----EVAEQRAAKLRETAAAFRAEAAELEQKQARERRENAQRSFNTFDSNKDGSVDVAELKAGLEGPLRRSFTKTLQARMGRKPSKEEVDDRIAGLPGGTLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXDRMRPDAGTVV--VSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLIGFFSLSIWSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANASSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDN 407
BLAST of mRNA_E-siliculosus-1a_M_contig80.16224.1 vs. uniprot
Match: D7FRG5_ECTSI (EF-hand domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG5_ECTSI) HSP 1 Score: 323 bits (828), Expect = 1.390e-100 Identity = 200/395 (50.63%), Postives = 271/395 (68.61%), Query Frame = 2
Query: 71 MAPVTASTFPLVALFLGSTTAFLAPSGRSASTWCGPNAQQQHQSARAGSITRRR--------PSSAVLQMATGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADRSFAAFDSDKDGAVGVAELKAGLEGPLKKTFTKQLTTRMGRKPTPEEVEAKILELPGGALFPDDLAERLIKLYDQNGDGVLQQSEFAPTEELRARLESIFRERREEELEARQAERKREMDAKTK-GKGKMLSSVADSDREAASATSLEKALCALPYILPLSDGIVYAQHIYSTFPQQMAWSEPLVAILVAVNNLPFATLVAFFGMSILSSNQNINKLLRFNMLQAINFDIALIVPSVFGPLLTWSLGSDAYKISPMTDIATDIISVSLVLAVAYSISASATG 1228
MAP++A+T PL+AL LGSTTAF+AP GR AS W N Q+ +S+ + + TR P+++ L+M + XXXXXXXX A RSF FDS+KDG+V +AELKAGLE PL+++FTK L RMGRKP+ EEV+ +I LPGG LFPD+LA +LI+ YDQNGDG+LQQSEFAPTEELR RLE++ ++RE+E AR ER+R+MD K + G ++ V+ D AT+ +KAL ALPY+LPL DGI++A H++ FP+Q AW++PL A+L+A+ +LPFATL+ FF +SI SSN +NKL+RFNM QAIN DIALI+P V G + LG+DA K++P+++ +D++ V+L+ AVAYS+ SATG
Sbjct: 1 MAPLSATTIPLLALSLGSTTAFVAPIGRGAS-WSLANPQRAVRSSTSAAATRHNTLRRSSAMPATSSLRMVS----KVAEQKAAKLRETAAAFRAEXXXXXXXXARERRENALRSFNTFDSNKDGSVDIAELKAGLESPLRRSFTKTLQARMGRKPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLLSQQREDERLARLEERQRQMDDKMRPDTGAVV--VSPGDVNDGPATTADKALSALPYLLPLVDGILFAAHLFGAFPEQTAWAQPLAAVLLALRSLPFATLIGFFSLSIGSSNPRVNKLVRFNMQQAINLDIALILPGVVGAITGGMLGADAVKLAPLSNAGSDVVFVALLAAVAYSVGTSATG 388
BLAST of mRNA_E-siliculosus-1a_M_contig80.16224.1 vs. uniprot
Match: D8LS20_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS20_ECTSI) HSP 1 Score: 283 bits (724), Expect = 3.420e-85 Identity = 176/352 (50.00%), Postives = 225/352 (63.92%), Query Frame = 2
Query: 71 MAPVTASTFPLVALFLGSTTAFLAPSGRSASTWCGPNAQQQHQSARAGSITR---RRPSSAV-----LQMATGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADRSFAAFDSDKDGAVGVAELKAGLEGPLKKTFTKQLTTRMGRKPTPEEVEAKILELPGGALFPDDLAERLIKLYDQNGDGVLQQSEFAPTEELRARLESIFRERREEELEAR-QAERKREMDAKTKGKGKMLSSVADSDREAASATSLEKALCALPYILPLSDGIVYAQHIYSTFPQQMAWSEPLVAILVAVNNLPFATLVAFFGMSILSSNQNINKLLRFNMLQAINFDIALIVPSVFG 1099
MAP+TA+ PLV LF+GSTTAF+ P+GR AS W N Q +S+ + TR RR SSA L+M + A RSF FDS+KDG+V VAELKAGLEGPL+++FTK L RMGRKP+ EEV+ +I LPGG LFPDDLA +LI+ YDQNGDG+LQQSEFAPTEELR RLE++F ++REEE AR + D G ++ V+ D AT+ +KAL ALPY+LPL+DG+V+A H++ F +Q AW++PL A+L+A+ ++PFATL+ FF +SI SSN INKL+RFNM QAIN DIALI+P V G
Sbjct: 1 MAPITATIVPLVTLFVGSTTAFVTPTGRGAS-WSLANPQHAVRSSTSAVATRHNARRRSSATPATSSLRMVS----EVAEQRAAKLRETAAAFRAEAAELEQKQARERRENAQRSFNTFDSNKDGSVDVAELKAGLEGPLRRSFTKTLQARMGRKPSKEEVDDRIAGLPGGTLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXDRMRPDAGTVV--VSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFLEQTAWAQPLAAVLLALRSVPFATLIGFFSLSIGSSNPQINKLVRFNMQQAINLDIALILPGVVG 345
BLAST of mRNA_E-siliculosus-1a_M_contig80.16224.1 vs. uniprot
Match: A0A6H5JBJ0_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ0_9PHAE) HSP 1 Score: 243 bits (621), Expect = 2.520e-71 Identity = 138/294 (46.94%), Postives = 187/294 (63.61%), Query Frame = 2
Query: 392 FAAFDSDKDGAVGVAELKAGLEGPLKKTFTKQLTTRMGRKPTPEEVEAKILELPGGALFPDDLAERLIKLYDQNGDGVLQQSEFAPTEELRARLESIFRERREEELEARQAERKREMDAKTKGKGKMLSSVADSDREAASATSLEKALCALPYILPLSDGIVYAQHIYSTFPQQMAWSEPLVAILVAVNNLPFATLVAFFGMSILS-SNQNINKLLRFNMLQAINFDIALIVPSVFGPLLTWSLGSDAYKISPMTDIATDIISVSLVLAVAYSISASATGAIPNKIPFFGKINR 1270
F FDS+KDG+V +AELKAGLE PL++ TK L RMGRKP+ EEV+ +I LPGG LFPD+LA +LI+ YDQNGDG+LQ SEFAPTEELR RLE +F ++RE+E AR ER+R MD K + P + +V AW++PL A+L+A+ ++PFATL+ FF +S+ N +NKL+RFN QAIN DIALI+P V G + LG+DA K++P+ + +D++ V+L+ AVAYS+ SATG+ PNK+P G++NR
Sbjct: 47 FNTFDSNKDGSVDIAELKAGLESPLRRGLTKTLQARMGRKPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQLSEFAPTEELRTRLEDLFSQQREDERVARMEERQRRMDDKMR---------------------------------PDTGAVV------------TAWAQPLAAVLLALRSVPFATLIGFFSLSVHRLRNPQVNKLVRFNTQQAINVDIALILPGVVGAIAGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNR 295
BLAST of mRNA_E-siliculosus-1a_M_contig80.16224.1 vs. uniprot
Match: D8LTM8_ECTSI (TIC 20 related, plastid import n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTM8_ECTSI) HSP 1 Score: 245 bits (625), Expect = 2.920e-70 Identity = 133/301 (44.19%), Postives = 195/301 (64.78%), Query Frame = 2
Query: 380 ADRSFAAFDSDKDGAVGVAELKAGLEGPLKKTFTKQLTTRMGRKPTPEEVEAKILELPGGALFPDDLAERLIKLYDQNGDGVLQQSEFAPTEELRARLESIFRERREEELEARQAERKREMDA----KTKGKGKMLSSVADSDREAASATSLEKALCALPYILPLSDGIVYAQHIYSTFPQQMAWSEPLVAILVAVNNLPFATLVAFFGMSILSSNQNINKLLRFNMLQAINFDIALIVPSVFGPLLTWSLGSDAYKISPMTDIATDIISVSLVLAVAYSISASATGAIPNKIPFFGKINR 1270
A +F +FD++ DG V V EL AGLEG L+K F K++T M RKP+P EV+ +I E+PGG+L P +LA++LI+ YD NGDGVLQ SEFA ++R RL+S+F +R +E A R+RE++ K + + K D T +K L LPY LPL D +V+ HI+ TFP Q+++ EPLVAIL+ +LPF+ L+ FFG+ ++ +NKL+RFN+ QA+ DIA+ PS+F ++T LG D+ K++P+ + D+I V++V V YSI++SA G +P +P GK+NR
Sbjct: 117 AQEAFDSFDTNDDGTVDVKELIAGLEGQLRKDFIKRMTKTMKRKPSPAEVDERISEMPGGSLLPMELAQKLIESYDTNGDGVLQPSEFASKADMRVRLDSLFADRAQEARLEAAAAREREIENRGADKARQEAKARGLALPEDFNDGPPTITDKLLSVLPYTLPLMDSLVFGAHIFQTFPTQLSFLEPLVAILLIYRSLPFSGLILFFGLQWFAAKPEVNKLVRFNLRQAVILDIAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIGVLPESLPILGKMNR 417
BLAST of mRNA_E-siliculosus-1a_M_contig80.16224.1 vs. uniprot
Match: A0A6H5KUU9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU9_9PHAE) HSP 1 Score: 227 bits (578), Expect = 1.760e-65 Identity = 120/232 (51.72%), Postives = 166/232 (71.55%), Query Frame = 2
Query: 590 LIKLYDQNGDGVLQQSEFAPTEELRARLESIFRERREEELEARQAERKREMDAKTKGKGKMLSSVADSDREAASATSLEKALCALPYILPLSDGIVYAQHIYSTFPQQMAWSEPLVAILVAVNNLPFATLVAFFGMSILSSNQNINKLLRFNMLQAINFDIALIVPSVFGPLLTWSLGSDAYKISPMTDIATDIISVSLVLAVAYSISASATGAIPNKIPFFGKINRVTRDD 1285
L++ YDQNGDG+LQQSEFAPTEELR RLE++F ++REEE AR K + + V+ D AT+ +KAL ALPY+LPL+DG+V+A H++ FP+Q AW++PL A+L+A+ ++PFATLV FF +S+ SSN INKL+RFNM QAIN DIALI+P V G + LGSDA K++P+ + +D++ V+L+ AVAYS+ SATG+ PNK+P G++NR D+
Sbjct: 40 LVRSYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXXKMRPDAGAVE-VSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLVGFFSLSVGSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDN 270
BLAST of mRNA_E-siliculosus-1a_M_contig80.16224.1 vs. uniprot
Match: A0A6H5KVD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD7_9PHAE) HSP 1 Score: 184 bits (468), Expect = 9.360e-51 Identity = 95/187 (50.80%), Postives = 136/187 (72.73%), Query Frame = 2
Query: 725 ERKREMDAKTKGKGKMLSSVADSDREAASATSLEKALCALPYILPLSDGIVYAQHIYSTFPQQMAWSEPLVAILVAVNNLPFATLVAFFGMSILSSNQNINKLLRFNMLQAINFDIALIVPSVFGPLLTWSLGSDAYKISPMTDIATDIISVSLVLAVAYSISASATGAIPNKIPFFGKINRVTRDD 1285
ER+R+MD K + + V+ D AT+ +KAL ALPY+LPL+DG+V+A H++ FP+Q AW+EPLVA+L+A+ ++PFATL+ FF +S+ SSN INKL+RFNM QAIN DIALI+P V G + LGSDA K++P+ + +D++ V+L+ AVAYS+ SATG+ PNK+P G++NR D+
Sbjct: 3 ERQRQMDDKMRPDAGAVE-VSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAEPLVAVLLALRSVPFATLIGFFSLSVGSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDN 188
BLAST of mRNA_E-siliculosus-1a_M_contig80.16224.1 vs. uniprot
Match: A0A6H5KCI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI4_9PHAE) HSP 1 Score: 182 bits (463), Expect = 1.980e-49 Identity = 105/247 (42.51%), Postives = 150/247 (60.73%), Query Frame = 2
Query: 530 EAKILELPGGALFPDDLAERLIKLYDQNGDGVLQQSEFAPTEELRARLESIFRERREEELEARQAERKREMDAKTKGKGKMLSSVADSDREAASATSLEKALCALPYILPLSDGIVYAQHIYSTFPQQMAWSEPLVAILVAVNNLPFATLVAFFGMSILSSNQNINKLLRFNMLQAINFDIALIVPSVFGPLLTWSLGSDAYKISPMTDIATDIISVSLVLAVAYSISASATGAIPNKIPFFGKINR 1270
+ +I LPGG LFPD+LA +LI+ YD NG+G+LQQSEFAPTEELR RLE++F ++REE+ AR ER+R+MD + + V+ D + + AL ALPY+LPL+DGIV+A H++ FP+Q AW++PL A AIN DIALI+P V G + LG+DA K++P+ + +D++ V+L+ AVAYS+ SATG+ P+K+P G++NR
Sbjct: 21 DERIAGLPGGTLFPDELALKLIQTYDHNGNGLLQQSEFAPTEELRTRLENLFSQQREEKRLARMEERQRQMDDNMRPDAGAVV-VSPGDVNDGLVNTADNALSALPYLLPLADGIVFAAHLFGVFPEQTAWAQPLAA--------------------------------------AINVDIALILPGVVGAIAGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPSKLPLLGRLNR 228 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig80.16224.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig80.16224.1 >prot_E-siliculosus-1a_M_contig80.16224.1 ID=prot_E-siliculosus-1a_M_contig80.16224.1|Name=mRNA_E-siliculosus-1a_M_contig80.16224.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=407bp MAPVTASTFPLVALFLGSTTAFLAPSGRSASTWCGPNAQQQHQSARAGSIback to top mRNA from alignment at E-siliculosus-1a_M_contig80:58060..63552+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig80.16224.1 ID=mRNA_E-siliculosus-1a_M_contig80.16224.1|Name=mRNA_E-siliculosus-1a_M_contig80.16224.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5493bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig80:58060..63552+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig80:58060..63552+ >mRNA_E-siliculosus-1a_M_contig80.16224.1 ID=mRNA_E-siliculosus-1a_M_contig80.16224.1|Name=mRNA_E-siliculosus-1a_M_contig80.16224.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2442bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig80:58060..63552+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |